mRNA_H-elongata_contig17302.4483.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: D7FM15_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM15_ECTSI) HSP 1 Score: 579 bits (1492), Expect = 1.820e-185 Identity = 357/642 (55.61%), Postives = 428/642 (66.67%), Query Frame = 1
Query: 1 AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGAGMAKMILEGVCGGLVRRKPDL--------VEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXX-----------------------------------------------------ARPAAGGKKLGSKLP-LISPYTRSGLRREPQSRGVAVSVKR--VSKVPEGGFVGVADG------DDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRR--RGDSATA----SAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTR-RGESLHSLFAGESIRFERRAQMLKKAAREMDARR 1695
AIE AFR+G L VLAATSTLGAGVNLPAGRVILRN+NA GGGLSATSYRQMAGRAGRKGAGRARGEA+LIA+NKGQA RAT +MNAGLAAV+SAL P+ DGG G +M LE VCG L+R + DL + C+L+FHQ P+ AR+ L D+A+AA+Q+LIDE CV+L+ + KP ++P G+KLG + P ++ T + R + ++ + K P G +G A G DD LVPTKLGLAIFRSSM P +GLM+YRDLSEAK+GINLR+TL LAYLLTPL PP+G+KPNWERL A+Y+ A++A A E G +A LV+DFHKIGITE LHLWASRGP +++PLLSP V++ AS RRGG RR RG + A++AVRLVAAMALKDVSDGY+LGQVAKSYGMNKG+LQ+LRQSTATFS MVASFLKELGWT+FLM+VKG++P+LSLGVSN LLPLMQ VPG+SRTEA AL+Q GI NAKSLL+AS +RVATALR+NVPFRT +G AG RFERRAQML +AR +D +R
Sbjct: 389 AIEKAFRSGTLDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATSYRQMAGRAGRKGAGRARGEALLIAANKGQAARATGLMNAGLAAVRSALTPTADGGTGFTRMFLEAVCGKLIRTRADLRTGCPAVSSPNITCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQRPTPAVAKPIATATKATASASLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRVADTATHVPATYVPATKRSKPIVVGQKLGVQTPPVVYNDTAAAARARRATAAMSCEAQHGDFRKEPRSGGLGSASGVEEAGSDDRLLVPTKLGLAIFRSSMPPGDGLMIYRDLSEAKNGINLRHTLYLAYLLTPLSPPAGLKPNWERLRAMYASAQAA--AAETPPGPNAHLVEDFHKIGITESQLHLWASRGPGGGTREAPLLSPTAVQQAASARRGGRGEDGKTGTRRDARGSEEKKPTGLNPAKRAVRLVAAMALKDVSDGYHLGQVAKSYGMNKGELQNLRQSTATFSGMVASFLKELGWTIFLMLVKGHIPKLSLGVSNQLLPLMQ-VPGMSRTEASALFQEGIVNAKSLLSASSDRVATALRINVPFRTATKGGRGKDRGAGGCFRFERRAQMLADSARAVDTKR 1027
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A6H5L306_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L306_9PHAE) HSP 1 Score: 349 bits (895), Expect = 4.000e-102 Identity = 270/643 (41.99%), Postives = 334/643 (51.94%), Query Frame = 1
Query: 1 AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVD-------------GGAGMAKMILEGVCGG------LVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKP------APXXXXXXXXXX----------------------------------------ARPAAGGKKLGSKLPLISPYTRSGL---RREPQSRGVAVSVKRVSKVPEGGFVGVADG------DDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQ--VAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFR--TRRGESLHSLFAGESIRFERRAQMLKKAAREMDARR 1695
AIE AFR+G L VLAATSTLGAGVNLPAGRVILRN+NA GGGLSAT + +G +V + K TR V S + D + ++ C L+ R + C+L+FHQ P+ AR+ L D+A+AA+Q+LIDE CV+L+ KP AP XXX ++P G+K+G + P ++ + RR + K P G +G G DD LVPTKLGLAIFRSSM P +GLM+YRDLSEAK+GINLR+TL LAYLLTPL PP+G+KPNWERL A+Y+ A++A A E G +A LV+D HKIGITE LHLWASRGP +++PLLSP V++ AS RRGG +G+ D T + +DV G Q VAKSYGMNKG+LQ+LRQSTATFS MVASFLK VPG+SRTEA AL+Q GI NAKSLL+AS +RVATALR+NVPFR T+ G AGE RFERRAQML +AR +D +R
Sbjct: 335 AIEKAFRSGALDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATRFSSDVV---------VKGGSVAVLDQKKYTTRTARSAEPRFFNVFSCPVLATDEPPHVPTDPLHPPSPSALSSPRPTSACRYAYLKLLLMYRSCLPAMLLKCTLIFHQQPDEAARDRLHDYAWAAIQLLIDEGCVELIQPPTPAVPKPIATAAKAPASASLVAXXXXXXXXXXXXXXXXXXXXXXNKRVADTATHVPATYVPVTKRSKPTVVGQKVGVQTPPVAHNDTAAAARGRRATAAMSCEAQDGDFRKEPRSGGLGSVSGVEEAGSDDRLLVPTKLGLAIFRSSMPPGDGLMIYRDLSEAKNGINLRHTLYLAYLLTPLSPPAGLKPNWERLRAMYASAQAA--AAETPPGPNAHLVEDLHKIGITESQLHLWASRGPGGGTREAPLLSPTAVQQAASARRGG----LGD------DGKTGTR-------------RDVRGGTIDSQSPVAKSYGMNKGELQNLRQSTATFSGMVASFLK--------------------------------VPGMSRTEASALFQEGIVNAKSLLSASSDRVATALRINVPFRSATKEGRG-KDRGAGECFRFERRAQMLADSARAVDTKR 910
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: W7U5L3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L3_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.910e-47 Identity = 174/576 (30.21%), Postives = 274/576 (47.57%), Query Frame = 1
Query: 1 AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGL-SATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDAREN-LLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPE-GGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLL-----------SPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYN-LGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTRR---GESLHSLFAGESIRFERRAQMLKKAA 1674
A+E AFR G+L V+ ATSTLG G+NLPA RVI R L G + +SYRQMAGRAGR G + GE++L+A + AT +M L + S L P DGG + + ILE + G +++ DL ++ C+L Q R N L +A AL+ L++ V+ +P G + +++ T P+ + V VP+ G V L P+KLG A+F+SS P EGL+V++DL A+ + L L L YL+TP+ P + P++ +L+ +Y RA+ TD A + F IG +E L W+ + P++ PLL + L + + + R + VV GE +A RL A+AL D++ L A +YG+++G LQ+L+QS A++ M+ SFL +LGWT+ ++ + L+PLMQ +P + + A ALY + ++ + E +A +R PF + G ++ L + E ++ A+ L++AA
Sbjct: 485 ALEEAFRRGVLSVIVATSTLGTGINLPAARVIFRTLRPGGNRVFDISSYRQMAGRAGRAGQQKY-GESILLARSPQDVKEATRLMTEPLHDLHSCLDPEQDGGRALVRAILEAIASGSLQKNDDLDIFLHCTLALRQRIRHSPRLNSFLYYARDALRYLVEHRIVKQLP---------------------------GPSVNAEV-----STSQRAEHTPEQKEQTVMSTAAPPVPDIGSTVSTL------LSPSKLGHALFKSSFAPDEGLLVFQDLKHAQQRLVLDGNLHLIYLVTPVFHP--LLPDYNQLWKIYDRAR-------RTDPVKALI---FELIGFSEALLDRWSHQQPASGVLIGPLLHLGSSEAGNHTARGLAQPIGRSIRMATGVVEGEQLM----------IMRARRLWGALALHDLAVAERPLDATAATYGVDRGSLQALQQSAASYVGMIQSFLTQLGWTLLSRALEEAGTAVGGEQVKELMPLMQ-IPRLELSLARALYDTDVRTVAAVCSEPVEHLADIIRKIRPFSAEKRGDGVAVPGLESDEMACYDEAARRLREAA 998
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: UPI001885AD34 (DNA polymerase theta isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885AD34) HSP 1 Score: 150 bits (379), Expect = 1.860e-34 Identity = 160/535 (29.91%), Postives = 225/535 (42.06%), Query Frame = 1
Query: 4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL----GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAV--RLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRT 1590
+E AFR G +RVLAATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG GE+VL+ + + +++ L +KS L G V+ M + ILE + GG+ R D+ Y +CSLL + N + A EACV+ + + I+++ +G++ + PT+LG A SS+ P E L ++ DL A G L N L + YL+TPL +W + + L+ + S+ V A LV GI EG L R V GG V E RR Q A+ R + L+D+ + LG VA Y N+G LQSL+QS AT++ MV F + LGW +++ Y RLS GV L+ L++ V ++ T A A Y G+ L AS V ALR VPF++
Sbjct: 587 LEGAFRQGTVRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGVDTT-GESVLVCKEV-ERQKGISLLRGHLQPIKSCLVRREGEGVN--TSMLRAILEIIVGGVARTPQDVRLYASCSLL-----AASMKCNSKEECEEASNKGAIEACVEWLMENEFISVQ-----------------------------------------------------------------KEGEEEQYCPTQLGAATMSSSLSPTEALGIFADLQRAMKGFVLENDLHVLYLITPLYA-EWTTIDWYQFFCLWEQLSSSMKRV-------AELV------GIQEGFL----------------------ARSV-----GGKLVAKTEKQRR----------QMAIHKRFFTTLVLQDLVNEVPLGAVASKYSCNRGQLQSLQQSAATYAGMVTMFCRRLGWGNMELLLSQYQTRLSFGVQRELVDLVR-VSLLTATRARAFYVQGLTTVAELARASVADVEKALRNAVPFKS 995
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: UPI00094E0157 (DNA polymerase theta isoform X1 n=4 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094E0157) HSP 1 Score: 149 bits (375), Expect = 6.000e-34 Identity = 150/531 (28.25%), Postives = 221/531 (41.62%), Query Frame = 1
Query: 4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGA--GMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRT 1590
+E AFR G++RVLAATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG GE+VL+ + + + +++ L ++S L G M + ILE + GG+ D+ Y +CSLL +++ D A+ EACV+ + + I+++ DG++ + PT+LG A SS+ P E L ++ DL A G L N L + YL+TPL +W + + L+ + S S+ +G+ EG L S AK VA T + + I + R + L D+ L VA Y N+G LQSL+QS AT++ MV F + LGW +++ Y RLS G+ L+ L++ V ++ T A ALY G+ L AS V ALR VPF++
Sbjct: 601 LEGAFRQGMVRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGVDTT-GESVLVCK-EAERQKGVSLLTGDLQPIRSCLVRRQGDGVTTSMLRAILEIIVGGVASTPQDVRLYASCSLLAAGMKCNSKQDSQEDSNRGAI-----EACVEWLMENEFISVQ-----------------------------------------------------------------KDGEEEQYCPTQLGAATLSSSLSPTEALGIFADLQRAMKGFVLENDLHILYLITPLYA-EWTTIDWYQFFCLWEQL-------------STSMKRVAELVGVQEGFL------ARSVGAKL-----------VAKTEKQCRQIAIHK------------------RFFTTLVLHDLVKEVPLAAVASKYNCNRGQLQSLQQSAATYAGMVTMFCRRLGWGNMELLLSQYQTRLSFGIQRELVDLVR-VSLLTATRARALYAQGLCTVAELARASVADVQKALRNAVPFKS 1009
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A3P8HA37_9TREM (Helicase C-terminal domain-containing protein n=2 Tax=Echinostoma caproni TaxID=27848 RepID=A0A3P8HA37_9TREM) HSP 1 Score: 146 bits (369), Expect = 1.890e-33 Identity = 146/531 (27.50%), Postives = 242/531 (45.57%), Query Frame = 1
Query: 4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL---GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGV-ADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPF 1584
+E FRAG++RVL ATSTL +GVNLPA RVI+R G L +Y+QMAGRAGRKG + G+++L+ + R ++ +G+++V S L G S + + + + +LE + G + D Y++ +L+ + + H + + + + +P+ ++++ + + L + L + + + R + + + +K+P V A D RL PT LG A+ SS+GP GL+V+ ++++A+ I L L L YLLTP+ G +W R Y ++ +D R A L IG+ E + AS G S ++ +R+A R R A+AL + LG VA+ +G+N+G LQSL+Q AT++ MV F LGW ++ + RL GV+ L+ L++ P ++ A ALY GG + +L A +A L+ +PF
Sbjct: 9 VENGFRAGLIRVLVATSTLSSGVNLPARRVIIRTPLFHGQILDYLTYKQMAGRAGRKGVDTS-GQSILLCKPR-DLPRVRQLITSGMSSVSSCLMSHGGSPE--SSLRRALLEVIANGFIETVADARLYLSSTLMAASQRAQSSTPSTRRHNNRRKSLRLSQT--KALPKSQTLSQE----------NISQEESDTDPLLIACLAQLQDHELIYVNRTRCTDADCQTCQLNAKLPSDQSDPVKAYPDCARLQPTALGRAVLSSSLGPTHGLVVFEEMNKARRAIALDTELHLVYLLTPVYLDVGAGLDWFRYLERY-------QSLPPSDRRVADL------IGVEERFITRMAS-GASGGMQKHGETGSSHAQRLALHR----------------------------RFYTALALYGLVREDGLGTVAEQFGVNRGLLQSLQQQAATYAGMVTIFCNRLGWVHMERLLSSFQSRLFHGVAEELVDLLRLQPAVNAQRARALYSGGYSSVSALSTARACDIARLLQRAIPF 481
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A8J4WSC1_9TREM (DNA-directed DNA polymerase n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4WSC1_9TREM) HSP 1 Score: 143 bits (361), Expect = 3.360e-32 Identity = 159/557 (28.55%), Postives = 238/557 (42.73%), Query Frame = 1
Query: 4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGA--GMAKMILEGVCGGLVRRKPDLVEYMACSLL----------FHQTPEG-DARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSR------GVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTRRGESLHSL 1617
+E+ FRAG++R+L ATSTL +GVNLPA RVI+R G L Y+QMAGRAGRKG + G+++L+ + R +++AG+ V+S L S G + + + +LE + G + D Y++ +L+ F + + R L + LQ C +L P+ + L + L +S Y + R + V+V V G A RL PT G A+ SS+GP GL+V+ +L +A+ I L L YLLTP+ G +W R Y A+ D R A L IG+ E + S ++ ++ S L RVA R R A+AL + L VA+++G+N+G LQSL+Q AT++ MV F LGW ++ Y RL GVS L+ L++ +P ++ A ALY GG SL +A +A L+ V F+ G +L L
Sbjct: 344 VESGFRAGVIRILVATSTLSSGVNLPARRVIIRTPLFHGRILDYLCYKQMAGRAGRKGLDTS-GQSILLCKPR-DLPRVRQLISAGMPPVRSCLIDSHGGASESSLKRALLEVIANGFIETVADARLYLSSTLMAVIMLSTNDQFAASSQNCSTRRRSLRLSQPGLQ-----PCRELCGSSTKQLESPSLTEQFISFI--------NRILNTCLSQLSDYELILIDRSTCAHTGCLDCNVSVDQDERDLVKSDILPGCA-----RLQPTAFGRAVLSSSLGPTHGLVVFEELDKARRAIALDTDLHFVYLLTPVYLDVGAALDWYRYLEQY-------QALSAADRRVADL------IGVEERFIIRCVSGASASGSRYGT--STCLADRVALHR----------------------------RFYMALALYRLVCEDGLSTVAQNFGINRGLLQSLQQQAATYAGMVTVFCNRLGWVHLERLLANYQSRLFYGVSEELVDLLRLLPLVNAQRARALYSGGYTTVSSLASAKPRDLARFLQRAVQFQKGEGCTLEQL 837
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: UPI0008709B60 (DNA polymerase theta n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008709B60) HSP 1 Score: 143 bits (360), Expect = 4.400e-32 Identity = 143/534 (26.78%), Postives = 218/534 (40.82%), Query Frame = 1
Query: 4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSALGPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRTRRGES 1605
IE AF+AGI+ VL ATSTL +GVNLPA RVI+R L +Y+QM GRAGRKG RGE++L+ +A +AT + L V+S L +G+ + I+E + G V+ D+ Y+ C+ + + + DH + D CV + + I++ + D+GR+ PTKLGLA+ SS+ P + L+V R+L +++ L N L + Y +TP +W RL Y +L +D ++ G P +R AS R S V + + R A+AL ++ L +V++ +G+ KG LQ+L+QS ATF+ MV+ F K LGW +++ + RL GV L L+Q VP ++ A L+ G N + A V +ALR ++T GES
Sbjct: 337 IENAFKAGIINVLTATSTLSSGVNLPARRVIIRTPIFGRQLLDVMTYKQMIGRAGRKGIDE-RGESILMCKENERA-QATRLATMKLHPVRSCLSSRGSVSSGLKRAIMEVIASGKVKSLKDIDTYIECTF---------SSKCIEDHDDGSTSSAKD--CVDYLVKNDFISV-----------------------------------------------------------------CTEDDEGRVTPTKLGLAVLASSLSPDQALLVLRELKKSRQSFVLENDLHIIYEVTPYFISEQAAIDWMRLMETYD-----------------ALTEDRKRVAEVIGF---------------EPAFVSKCIRAAASKREMSSKVTLHQ------------------RFYVALALNELVQEVPLSEVSEKFGLQKGLLQNLQQSAATFAGMVSIFCKRLGWHNLELLISQFQKRLHFGVQQELCELLQLVPMTAQV-ARILFNAGFTNLPQVARAELHEVESALRNARAYQTNNGES 741
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: A0A7M3QZH5_SPIER (DNA-directed DNA polymerase n=2 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A7M3QZH5_SPIER) HSP 1 Score: 143 bits (360), Expect = 4.590e-32 Identity = 162/536 (30.22%), Postives = 236/536 (44.03%), Query Frame = 1
Query: 4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL-GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFH--QTPEGDARENLLDHAFAALQVL-IDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKL--PLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPSGIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPS--AAAKQSPLLS-PDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPF 1584
IE AFR G LR+L ATSTL +GVNLPA RVI+R L G L +Y+QM+GRAGRKG GE++L+ + RA +++ G+ V S L S + + + +LE + G+V R D+ Y+ +LL + D E+L + Q+ + + P +R + + R A +K S L +S S L + S R S G + +D L T LG A+ S++GP +GL V+ +L A+ I L L L YL+TP+ G +W R +Y + D R A LV G+ E + + G A KQS + + LV R R A+AL + L V++ + +N+G LQSL Q AT++ MV F LGWT ++ + RL GV++ L+ LM+ P IS A ALY G +A SL A + VA AL+ + PF
Sbjct: 426 IEVAFRKGHLRLLVATSTLSSGVNLPARRVIIRTLLFHGQTLDYLTYKQMSGRAGRKGID-TEGESILLCKPR-DLGRAKQLLSTGMPPVTSCLLSRSGTPQSSLRRALLEVIVNGIVERVSDVRAYIESTLLAACLKAAGCDYSESLEKSPSSGPQLATVLPVSAMVHPTRRRSSRR----VLRRSSQASVRDMAASEKDHSNLLFACLSSLVDSELITAEEVSCEHESCLRPSTPAVGDPIFFSDCT--HLRSTALGRAVLSSALGPIDGLTVFAELDRARRSIALDTDLHLVYLVTPIYLDVGESLDWFRYLEIYQNLSAP-------DRRVADLV------GVGERFIMRCVAGGSCRVGAKKQSAVQAFSALVHR---------------------------------RFYTALALYRLICEDGLACVSERFRVNRGVLQSLTQQAATYAGMVTIFCNRLGWTHLERLLAAFQARLLFGVASELIDLMRLSPLISAQRARALYSAGFTSAASLARARPKEVARALQQSNPF 907
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Match: K1QA60_CRAGI (DNA-directed DNA polymerase n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QA60_CRAGI) HSP 1 Score: 139 bits (351), Expect = 6.610e-31 Identity = 148/534 (27.72%), Postives = 227/534 (42.51%), Query Frame = 1
Query: 4 IEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQMAGRAGRKGAGRARGEAVLIASNKGQATRATAIMNAGLAAVKSAL----GPSVDGGAGMAKMILEGVCGGLVRRKPDLVEYMACSLLFHQTPEGDARENLLDHAFAALQVLIDEACVQLMPQKRSIAMKPAPXXXXXXXXXXARPAAGGKKLGSKLPLISPYTRSGLRREPQSRGVAVSVKRVSKVPEGGFVGVADGDDGRLVPTKLGLAIFRSSMGPAEGLMVYRDLSEAKHGINLRNTLRLAYLLTPLCPPS-GIKPNWERLYALYSRAKSASSAVENTDGRSASLVDDFHKIGITEGHLHLWASRGPSAAAKQSPLLSPDLVRRVASTRRGGSSVVIGEAPRRRGDSATASAAQKAVRLVAAMALKDVSDGYNLGQVAKSYGMNKGDLQSLRQSTATFSSMVASFLKELGWTMFLMIVKGYVPRLSLGVSNNLLPLMQQVPGISRTEAGALYQGGIFNAKSLLAASEERVATALRMNVPFRT 1590
+E AFR G ++VL ATSTL +GVNLPA RVI+R G + +Y+QM GRAGRKG +GE++LI G+ ++A ++ + L V S L G + + M + ILE V G+ D+ Y +C++L LD + Q +I AC+Q + + ++ L+R S GV + R VPT+LG A+ SS+ P EGL V+ +L +A+ L N L + YL+TP+ G NW + Y L+ + + R A LV G++E L A + P + + +R +A +R +S++ L D+ LG+V YG NKG LQSL+Q+ ATF+ MV F LGW +I+ + RL+ G+ L L++ + ++ A LY GG +L AS V + + PF++
Sbjct: 545 LEGAFRQGAVKVLIATSTLSSGVNLPARRVIIRTPLFHGKTIDFLTYKQMIGRAGRKGVD-TQGESILICK-PGERSKAVTLVQSALPPVSSCLIKNQGEQLS--SSMKRAILEIVVSGVADSVTDVTAYASCTMLAAS----------LDTSSDQTQGMIS-ACIQFLQENEFVS---------------------------------------LQRVQSSDGVY---------------------EDRFVPTQLGAAVLASSLSPDEGLSVFAELQKARQCFVLENELHIVYLVTPIYSLDLGAGMNWYKFYCLWDK-------LSPDKKRVAQLV------GVSEAFL-------TRAIQGRIPTKTENQIRSLAIHKRFYTSLI----------------------------LSDLVQEVPLGEVCHRYGANKGQLQSLQQTAATFAGMVTVFCARLGWYNLELILGQFQHRLTFGIQRELCDLVR-LTLLNGQRARVLYDGGFHTVAALANASVSDVEKIFKKSSPFQS 954 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17302.4483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17302.4483.1 >prot_H-elongata_contig17302.4483.1 ID=prot_H-elongata_contig17302.4483.1|Name=mRNA_H-elongata_contig17302.4483.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=565bp AIEAAFRAGILRVLAATSTLGAGVNLPAGRVILRNLNAAGGGLSATSYRQback to top mRNA from alignment at H-elongata_contig17302:3..6878+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17302.4483.1 ID=mRNA_H-elongata_contig17302.4483.1|Name=mRNA_H-elongata_contig17302.4483.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6876bp|location=Sequence derived from alignment at H-elongata_contig17302:3..6878+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17302:3..6878+ >mRNA_H-elongata_contig17302.4483.1 ID=mRNA_H-elongata_contig17302.4483.1|Name=mRNA_H-elongata_contig17302.4483.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3390bp|location=Sequence derived from alignment at H-elongata_contig17302:3..6878+ (Himanthalia elongata Himel1 dioecious)back to top |