mRNA_H-elongata_contig172820.4473.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: D7FPE8_ECTSI (Intraflagellar transpot protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE8_ECTSI) HSP 1 Score: 185 bits (469), Expect = 2.400e-54 Identity = 99/145 (68.28%), Postives = 117/145 (80.69%), Query Frame = 1
Query: 1 EQGMSGMKASGHGMG------RQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGMSGMK +G RQVQDGS+FIGVLR K+ND RAE+ RLQ EI++HE+ QQGHLERT++TMLQDVK LEG LADYN+AVDKARTT DPGE+T++LHDLED NR+E +DEIFLAKQ+ ERE QE+E EMEAVH
Sbjct: 68 QQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQDVKALEGTLADYNLAVDKARTTADPGEVTKYLHDLEDRNRREAQGLDEIFLAKQQHERETQELEAEMEAVH 212
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A6H5JUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN2_9PHAE) HSP 1 Score: 160 bits (404), Expect = 3.340e-44 Identity = 95/175 (54.29%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 10 MSGMKASGHGMG----RQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQ-----------------------------------DVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
MSGMK + RQVQDGS+FIGVLR K+ND RAE+ RLQ EI++HE+ QQGHLERT++TMLQ DVK LEG LADYN+AVDKARTT DP E+T++LHDLED NR+E +DEIFLAKQ+ ERE QE+E EMEAVH
Sbjct: 1 MSGMKTAAXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKALEGTLADYNLAVDKARTTADPSEITKYLHDLEDRNRREAQGLDEIFLAKQQHERETQELEAEMEAVH 175
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A836CE00_9STRA (Intraflagellar transport protein 74 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE00_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.200e-35 Identity = 75/140 (53.57%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1 EQGMSGMKAS-GHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGMSGM+ S G G GR VQDGS+F+G LR KI D + E+ +L+ E EQH +D+ Q G LERT+ET+L +VK LEG LAD+N+A+DKARTT DPGE+ +L +LED NR+ ++D +FL+KQ ER ++E+ + VH
Sbjct: 58 QQGMSGMRTSQGAGPGRLVQDGSFFLGQLRQKIMDIQRELAKLKAEGEQHTKDSSQYGGLERTYETLLAEVKNLEGTLADHNLAMDKARTTADPGEVVAYLSELEDRNRRNARELDNVFLSKQERERAVADVEQAIAQVH 197
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A6V2XWW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XWW9_HETAK) HSP 1 Score: 129 bits (324), Expect = 3.050e-32 Identity = 68/139 (48.92%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 1 EQGMSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGMSGMK +G G GRQVQD SY+IGVLR K+ + EI++L+ EI QH+ D+ Q LER +E +L++V+ LEG LADYN+A+DK R DP E+ + L NR++ ++D++FL KQ +R +E EEE+E +H
Sbjct: 71 QQGMSGMKTAGQGPGRQVQDPSYYIGVLRAKLTEIATEISKLKREINQHQTDSAQYSGLERKYEELLKEVRNLEGTLADYNLAMDKVRMHTDPTEVEAYQKQLAAKNRRDAQEVDQVFLRKQGRDRATREAEEEVERIH 209
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A8J2SUY1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUY1_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.520e-25 Identity = 58/139 (41.73%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 1 EQGMSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGM GMK + HG R+VQD SY++GVLR K+ + EI LQTE +QHER + G L++ +++L V++LEG LADYN+A+DKAR + DP EL ++ N++ ++D IF+ K++ + E ++++ +++ VH
Sbjct: 39 QQGMRGMKTT-HGPARKVQDSSYYVGVLRNKVTELTTEIYSLQTEHKQHERSVNEHGGLQKHHDSLLNRVRILEGTLADYNLALDKARVSTDPVELDEYISGFRAKNKQFANEVDRIFVIKKQKDEETKKLDTQIQEVH 176
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: F0YK18_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK18_AURAN) HSP 1 Score: 104 bits (259), Expect = 1.630e-25 Identity = 58/140 (41.43%), Postives = 91/140 (65.00%), Query Frame = 1
Query: 1 EQGMSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTT-VDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGM GMK + G RQVQD SY++G+LR K+ + EI LQ+E +QHER + G L++ E +L +V+ LEG LADYN+A+DKAR DP EL ++ + N++ +ID +F+ K++ + E ++IE ++ +H
Sbjct: 24 QQGMRGMKTA-QGPARQVQDSSYYVGILRSKVTELMNEIQSLQSEHKQHERSMNEYGGLQKRHENLLNEVRALEGTLADYNLAMDKARMVGTDPAELNDYITEFRAKNKQFANEIDRVFVIKKQKDEETKQIEAQIRDLH 162
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A7S3HDQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDQ6_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.910e-25 Identity = 60/138 (43.48%), Postives = 91/138 (65.94%), Query Frame = 1
Query: 4 QGMSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
QG+ GMKA G GR VQD +YF+G+LR KIND E RL+ E++Q RD Q LE+ +E ++++ + LEG LADYN+A+DK RT+ DP ++ + + + NR+ +D IF+ +++ E E Q IEE++EA +
Sbjct: 65 QGVKGMKAQGGNTGRLVQDSAYFVGLLRKKINDVNTESMRLRQEMDQQSRDNSQYVQLEKRYENLVKNKETLEGQLADYNLALDKTRTSTDPEDVQQMALHMAEKNRQAGQDLDRIFMQRKQRETETQNIEEQIEAQY 202
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A6G0WPH1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPH1_9STRA) HSP 1 Score: 106 bits (265), Expect = 4.600e-25 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 1 EQGMSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGM GM+ G GRQVQD SYF G L K + +EI+++ EIEQ +D Q LE+ +E + +V+ LEG LADYN+A+DK R+ DP E+ + L N KE ++D IF+ +Q ER ++ E+E+ A+H
Sbjct: 85 QQGMMGMRVMTAGPGRQVQDASYFTGKLHQKTAEITSEIDKINKEIEQDAKDKSQYAQLEKKYEHLAIEVRDLEGQLADYNLAMDKLRSATDPAEIRQVQEQLHHRNMKEAEEVDRIFIMRQEQERTSKHFEDEINAIH 223
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A421GI98_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GI98_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.240e-24 Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 1 EQGMSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGM GM+ G GRQVQD S+F G L K + +EI +LQ EIEQ +D Q LER +ET+ +V+ LEG LADYN+A+DK R+ DP E+ + L N +E +D +F+ +Q E+ + +E+EM +H
Sbjct: 217 QQGMMGMRVGSAGPGRQVQDASFFKGKLHSKTAEITSEIEKLQREIEQDAKDKAQYAQLERKYETLAIEVRDLEGQLADYNLAMDKMRSATDPAEIRQVQEQLHQRNAREAEDVDRVFILRQEQEKNVRRMEDEMTEIH 355
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Match: A0A2D4BMD9_PYTIN (Intraflagellar Transport Protein 72/74 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMD9_PYTIN) HSP 1 Score: 107 bits (268), Expect = 1.700e-24 Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 1 EQGMSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDALQQGHLERTFETMLQDVKMLEGDLADYNVAVDKARTTVDPGELTRFLHDLEDSNRKEEGKIDEIFLAKQRCERENQEIEEEMEAVH 417
+QGM GM+ G GRQVQD SYF+G L K + +EI+RL+ EIEQ +D Q LER +E++ +V+ LEG LADYN+A+DK R+ DP E+ + L N KE ++D IF+ +Q E + +E EM +H
Sbjct: 87 QQGMMGMRVGTAGPGRQVQDTSYFMGKLHAKTTEITSEIDRLRKEIEQDAKDKSQYAQLERKYESLAVEVRDLEGQLADYNLAMDKLRSATDPAEIRQVQEQLHHRNGKEAEEVDRIFILRQEQESAVRRMEGEMNEIH 225 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172820.4473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig172820.4473.1 >prot_H-elongata_contig172820.4473.1 ID=prot_H-elongata_contig172820.4473.1|Name=mRNA_H-elongata_contig172820.4473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp MSGMKASGHGMGRQVQDGSYFIGVLRGKINDTRAEINRLQTEIEQHERDAback to top mRNA from alignment at H-elongata_contig172820:563..1225+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig172820.4473.1 ID=mRNA_H-elongata_contig172820.4473.1|Name=mRNA_H-elongata_contig172820.4473.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=663bp|location=Sequence derived from alignment at H-elongata_contig172820:563..1225+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig172820:563..1225+ >mRNA_H-elongata_contig172820.4473.1 ID=mRNA_H-elongata_contig172820.4473.1|Name=mRNA_H-elongata_contig172820.4473.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig172820:563..1225+ (Himanthalia elongata Himel1 dioecious)back to top |