mRNA_H-elongata_contig17228.4453.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17228.4453.1
Unique NamemRNA_H-elongata_contig17228.4453.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: D8LB62_ECTSI (Metallo-beta-lactamase superfamily protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB62_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 2.520e-97
Identity = 205/451 (45.45%), Postives = 259/451 (57.43%), Query Frame = 1 
Query:    1 MAALATAILRGLTSPTHLNEMVSRGPEVANLDYCDPLGRRLIHIAADAGDVSALRWLIERGSDPRATTSTEGNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSIVADLTRHLRPLPVPLKGHEQTQNEESVASRDPQRKYAEKPKPSVGVTPPVPAATVNRD-----------PSI--PTAISRGDTGSQG--------RLMPASVGARSDGQKRS----------------------------------------------FDDRGVTQGGLFVSGAWSKAGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            MA LATAILRGLT+P HL++++SRG +VA+L + DPLGR L+H+AAD+GDV ALRW+I RG+DPR TT + G+TA                              XXXXXXXXXXXXX   V  L RHL   P                   PQ           GV P V                   P+I  P+A +     +Q         R +  +VG  +    +S                                              FD+R +T GG FV+GAWSKAGVCSCFNVRHR+LL KHGVVFDMGVCPSEV+ V HVF++HGHLDH GA+VSHARLR  SQG PAKYYM AELA+G++KV++AFEE+E A IAM+++AVGP+D +DLGQGCFVRPFLV+H+V+ALGFAL+R +++ LK EYR ++G+ +GAL+
Sbjct:    1 MAGLATAILRGLTTPEHLDDLLSRGADVADLSFVDPLGRSLVHLAADSGDVPALRWVISRGADPRKTTPS-GDTALHLAAAEGHRQTVAFLLEEASVGIPGVNATXXXXXXXXXXXXXXXXVRLLARHL---PAAXXXXXXXXXXXXXXXXXPQGA-------GQGVLPGVAXXXXXXXXXXXXXXXSTLPAITSPSAAAAASIRAQAQPVRAEDRRPLDTAVGMATGANIKSSXXXXXXXXXXXXXXXXXXXXXXXXXXKPSPKGXXXXXXXXXXRSAFDERAMTGGGFFVAGAWSKAGVCSCFNVRHRHLLGKHGVVFDMGVCPSEVLHVAHVFVSHGHLDHCGAIVSHARLRALSQGPPAKYYMGAELASGMEKVRKAFEEVEGASIAMDIVAVGPEDRVDLGQGCFVRPFLVKHRVDALGFALMRLKTDGLKHEYRQLDGREIGALR 440
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: A0A7S3MEQ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEQ3_9STRA)

HSP 1 Score: 119 bits (297), Expect = 7.110e-26
Identity = 65/165 (39.39%), Postives = 100/165 (60.61%), Query Frame = 1 
Query:  661 GGLFVSGAWSKAGVCSCFNVRHRNLLNKHG-VVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            G L V+GAW+KAG+ SC  V+  N   KH   +FD G   SE +  K+VFI+HGH+DH G+ +SHAR R  S GS A+YY+  ++   +   ++AFE+++ + I M++I VGP D+   G    V+ F   H+V + G+A+  ++   L PE RG+ G  +  L+
Sbjct:    6 GMLNVTGAWTKAGIASCVRVQGSN---KHDDFLFDCGFLNSETILSKYVFISHGHIDHVGSCISHARARSLS-GSVAEYYVPRDIVKHLDDARKAFEKLDNSAIPMKIIGVGPGDTFTFGTNMKVKVFPTCHRVPSQGYAVYVKKKGELLPEMRGLTGAEIKELR 166
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: A0A835Z2Q2_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.710e-21
Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 1 
Query:  793 VKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            V+HVFITHGHLDH GA+ +HARLRG+    PAK              K AFEE+ E ++ ME++ + P + + +G GC+V PF   H+V + G+ +  RR   LKPEY+G+   AL  L+
Sbjct:    3 VEHVFITHGHLDHCGAIFTHARLRGRDL-PPAK-------------AKGAFEELGEDELPMEIVPIQPGEEVSIGNGCYVAPFPTAHRVPSQGYIIRDRRPRGLKPEYQGLAAAALKELR 108
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: UPI00065BD6AE (tRNase Z TRZ1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BD6AE)

HSP 1 Score: 100 bits (250), Expect = 2.300e-20
Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 1 
Query:  682 AWSKAGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGP---DDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGAL 1149
            AWS +GV SC  ++  ++     +VFDMGV   E V   +VFITHGH+DH GAV +H   RG +   PA+Y++   L   +K V +A  E+ E   A+E + V P    D + L    FV+ F   H++ + G+ ++ +  + LK EYRGMEG  + AL
Sbjct:   42 AWSVSGVESCIVIKSEDV----HIVFDMGVAVPESVRGMNVFITHGHVDHIGAVANHVSKRGLNGMKPARYFVPPHLVDNLKSVTKAHYEMAETVEALENVKVLPFAEGDCVRLNSRFFVKTFPTVHRICSQGY-IVYKEEKRLKEEYRGMEGFEVAAL 195
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: A0A4D9D594_9STRA (Lactamase_B domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D594_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.840e-19
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = 1 
Query:  664 GLFVSGAWSKAGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKAL 1140
            G  +S AWS AG+ +C  +RHR     H +  D+G    E +   H+F++HGH+DH GA+++HAR R  S   PAKYY+       + + K A+E ++      E++ V P D   +     V  F  +H+V + G+A+IR +S+ LK   R +    L
Sbjct:   74 GFEISSAWSVAGIGTCIQLRHR-AFGLH-IAMDIGTSAGETLGAGHIFVSHGHIDHIGALLNHARARTLSN-KPAKYYVPVPATEPLLRAKAAYEALDGCAFNAEIVGVEPGDICRIHPNVRVEVFPTKHRVPSQGYAIIREKSKGLKAGCRNLSSHEL 229
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: W2QCK0_PHYPN (Lactamase_B domain-containing protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QCK0_PHYPN)

HSP 1 Score: 92.0 bits (227), Expect = 5.940e-18
Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 1 
Query:  652 VTQGGLFVSGAWSKAGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIE-EAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            V + G +   A   AG+ SC  V      +   V FD+G     VV   HVFITHGH+DH GAVV+HA  R   +  PA Y++ A LA  ++ + E+   ++ +A    +++ +   D + +     VR    +H+V +LG+ L  +++  LKPEYR + G  + ALK
Sbjct:    9 VVEAGGYTLHARCVAGIESCCYV------DSIDVAFDLGCLVGRVVNKSHVFITHGHVDHIGAVVAHAARRALQKQKPASYFVPAHLAPHLESILESTAAMQGDAPFPAKIVPLQAFDEVHISAKYLVRAVPTKHRVPSLGYILYEKKNR-LKPEYRQLPGAEIAALK 169
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: W2Q9Z8_PHYPN (Lactamase_B domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2Q9Z8_PHYPN)

HSP 1 Score: 92.0 bits (227), Expect = 1.820e-17
Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 1 
Query:  652 VTQGGLFVSGAWSKAGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIE-EAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            V + G +   A   AG+ SC  V      +   V FD+G     VV   HVFITHGH+DH GAVV+HA  R   +  PA Y++ A LA  ++ + E+   ++ +A    +++ +   D + +     VR    +H+V +LG+ L  +++  LKPEYR + G  + ALK
Sbjct:    9 VVEAGGYTLHARCVAGIESCCYV------DSIDVAFDLGCLVGRVVNKSHVFITHGHVDHIGAVVAHAARRALQKQKPASYFVPAHLAPHLESILESTAAMQGDAPFPAKIVPLQAFDEVHISAKYLVRAVPTKHRVPSLGYILYEKKNR-LKPEYRQLPGAEIAALK 169
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: A0A485KER6_9STRA (Aste57867_3114 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KER6_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.840e-17
Identity = 57/162 (35.19%), Postives = 84/162 (51.85%), Query Frame = 1 
Query:  667 LFVSGAWSKAGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            + V+    KA VC          +    V FDMGV   +     HVFITHGH+DH  A+ +HA  R  +   PA YYM A L   ++++   F E++E+ I   L+ +    +I +     V+ F   H+V +LG+      S+SLKPEY G+ G+ LGAL+
Sbjct:   16 VHVNSIAGKASVC---------YVESMNVAFDMGVNFLKAACQDHVFITHGHIDHIQALPAHAAERSLTGVKPATYYMPAHLVPHVEQIMANFCEMQESTIPATLVGIHAGATIHISSKVAVKAFPTDHRVASLGYVAYAI-SKSLKPEYAGLPGRELGALR 167
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: A0A484DTJ7_BRELC (Lactamase_B domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTJ7_BRELC)

HSP 1 Score: 90.9 bits (224), Expect = 3.980e-17
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 1 
Query:  694 AGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            AG+ SC  V      N   V FD+G     VV   H+FITHGH+DH GA+V HA  R   + +PA YY+LA +   +K + E+  E+++  +   ++ +   D + +     VR    +H+V +LGF L  +++  LKPEY+      + ALK
Sbjct:   19 AGIESCCYV------NSIDVAFDLGCIMGRVVNKSHIFITHGHIDHIGAIVIHAARRVLLKLAPAHYYVLASIVPHLKNLFESSAEMQDGPLPATIVPLQAFDEVHISAKYVVRAVPTKHRVPSLGFILYEKKNR-LKPEYKQFLSADIAALK 164
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BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Match: A0A1V9ZQP9_9STRA (Nuclear ribonuclease Z n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQP9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.270e-17
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 1 
Query:  694 AGVCSCFNVRHRNLLNKHGVVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYMLAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQHKVEALGFALIRRRSESLKPEYRGMEGKALGALK 1152
            AG+ SC  V+  +      V FDMG+   + V  KHVFITHGH+DH  A+  H   R  ++ +PA YY+   L   IK++  A+E + EA +   ++ V    S  +     V+ F   H+V +LG+   R  S  LKPEY G++ + L AL+
Sbjct:  285 AGIASCCYVQSMD------VAFDMGITFGKAVGQKHVFITHGHIDHIKALPGHVGERALNKMAPATYYVPKHLTENIKQILAAYESMTEAALPANIVGVEAGMSFRISSTVLVKAFATVHRVPSLGYVAYRV-SRQLKPEYVGLDREELIALR 430
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17228.4453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB62_ECTSI2.520e-9745.45Metallo-beta-lactamase superfamily protein n=2 Tax... [more]
A0A7S3MEQ3_9STRA7.110e-2639.39Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835Z2Q2_9STRA5.710e-2143.33Beta-lactamase-like protein n=1 Tax=Tribonema minu... [more]
UPI00065BD6AE2.300e-2038.36tRNase Z TRZ1 n=1 Tax=Aplysia californica TaxID=65... [more]
A0A4D9D594_9STRA1.840e-1933.96Lactamase_B domain-containing protein n=2 Tax=Mono... [more]
W2QCK0_PHYPN5.940e-1833.93Lactamase_B domain-containing protein n=7 Tax=Phyt... [more]
W2Q9Z8_PHYPN1.820e-1733.93Lactamase_B domain-containing protein n=19 Tax=Phy... [more]
A0A485KER6_9STRA1.840e-1735.19Aste57867_3114 protein n=1 Tax=Aphanomyces stellat... [more]
A0A484DTJ7_BRELC3.980e-1734.64Lactamase_B domain-containing protein n=1 Tax=Brem... [more]
A0A1V9ZQP9_9STRA4.270e-1735.95Nuclear ribonuclease Z n=1 Tax=Thraustotheca clava... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17228contigH-elongata_contig17228:4907..7326 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.8
Seed ortholog evalue7.1e-84
Seed eggNOG ortholog2880.D8LB62
KEGG koko:K08257,ko:K17299
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
EC3.2.1.101
COG Functional cat.G
CAZyGH76
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00537,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-27_005090.1
Exons4
Model size1155
Cds size1155
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17228.4453.1prot_H-elongata_contig17228.4453.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17228 4907..7326 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930003.0682778-CDS-H-elongata_contig17228:4906..56891622930003.0682778-CDS-H-elongata_contig17228:4906..5689Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 4907..5689 +
1691679241.6894133-CDS-H-elongata_contig17228:4906..56891691679241.6894133-CDS-H-elongata_contig17228:4906..5689Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 4907..5689 +
1622930003.0851686-CDS-H-elongata_contig17228:6125..62721622930003.0851686-CDS-H-elongata_contig17228:6125..6272Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 6126..6272 +
1691679241.7029402-CDS-H-elongata_contig17228:6125..62721691679241.7029402-CDS-H-elongata_contig17228:6125..6272Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 6126..6272 +
1622930003.09819-CDS-H-elongata_contig17228:6658..67831622930003.09819-CDS-H-elongata_contig17228:6658..6783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 6659..6783 +
1691679241.7136443-CDS-H-elongata_contig17228:6658..67831691679241.7136443-CDS-H-elongata_contig17228:6658..6783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 6659..6783 +
1622930003.1104481-CDS-H-elongata_contig17228:7226..73261622930003.1104481-CDS-H-elongata_contig17228:7226..7326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 7227..7326 +
1691679241.7230654-CDS-H-elongata_contig17228:7226..73261691679241.7230654-CDS-H-elongata_contig17228:7226..7326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17228 7227..7326 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17228.4453.1

>prot_H-elongata_contig17228.4453.1 ID=prot_H-elongata_contig17228.4453.1|Name=mRNA_H-elongata_contig17228.4453.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=385bp
MAALATAILRGLTSPTHLNEMVSRGPEVANLDYCDPLGRRLIHIAADAGD
VSALRWLIERGSDPRATTSTEGNTALHIAASEGHREAVRYLLEEVSMGVA
GLNLAGETALDVAITEDHGSIVADLTRHLRPLPVPLKGHEQTQNEESVAS
RDPQRKYAEKPKPSVGVTPPVPAATVNRDPSIPTAISRGDTGSQGRLMPA
SVGARSDGQKRSFDDRGVTQGGLFVSGAWSKAGVCSCFNVRHRNLLNKHG
VVFDMGVCPSEVVPVKHVFITHGHLDHSGAVVSHARLRGQSQGSPAKYYM
LAELAAGIKKVKEAFEEIEEAKIAMELIAVGPDDSIDLGQGCFVRPFLVQ
HKVEALGFALIRRRSESLKPEYRGMEGKALGALK*
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mRNA from alignment at H-elongata_contig17228:4907..7326+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17228.4453.1 ID=mRNA_H-elongata_contig17228.4453.1|Name=mRNA_H-elongata_contig17228.4453.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2420bp|location=Sequence derived from alignment at H-elongata_contig17228:4907..7326+ (Himanthalia elongata Himel1 dioecious)
ATGGCCGCTCTTGCCACAGCGATCTTGCGCGGCCTAACTTCACCAACCCA
CTTGAATGAGATGGTGTCACGCGGGCCTGAGGTTGCCAATCTCGACTACT
GCGACCCTCTTGGGCGACGCTTGATCCACATCGCGGCAGATGCTGGTGAT
GTCTCGGCGCTACGCTGGCTTATTGAGCGTGGGTCGGATCCGAGAGCAAC
AACATCTACGGAGGGAAACACAGCCCTGCACATAGCGGCTTCAGAGGGCC
ATCGAGAAGCTGTAAGGTATCTTCTGGAGGAGGTGTCCATGGGCGTGGCG
GGGCTAAATCTCGCGGGCGAGACAGCGCTCGACGTTGCCATCACTGAGGA
CCATGGGAGTATCGTGGCTGACTTAACGCGACACTTACGCCCTCTACCCG
TTCCATTAAAGGGACATGAGCAGACGCAGAATGAGGAATCGGTCGCAAGC
CGAGACCCACAGCGGAAGTACGCAGAGAAGCCTAAACCGAGCGTGGGCGT
GACACCTCCAGTTCCTGCCGCTACCGTCAACCGAGATCCTTCCATTCCAA
CCGCCATCTCTAGAGGTGATACAGGAAGTCAAGGACGGTTGATGCCTGCA
TCGGTCGGCGCACGTTCGGACGGACAGAAGCGGTCGTTCGATGACCGAGG
TGTGACGCAAGGGGGCCTTTTCGTTAGCGGAGCTTGGTCCAAAGCCGGCG
TTTGCTCATGTTTTAACGTCCGACACCGGAATCTTCTCAACAAACACGGC
GTTGTCTTTGACATGGGGGTTTGCCCTTCCGAGGTGAGCGTATACTTATC
TCGAGGATTAGCTCTATTTTGAAAGGCACGGAAAAAGCACGCGACATTGC
CTACTTAAAAAAAAGCACCTGCGTGTCTTTTAGGCCGGTTTGGTTGTAGA
CGGCACGCACACAGCACAGTGTCAAGTTCTGTCAGTCCGCGGCCACATCT
CATCGTATTTCCAGAAACGGCTCCAGACTTGACCCTACCCCAATAGGACA
TAGTATTAGTAGTAGTGAAGAAATCTGCGTTCTACACCTTCTCGTCTCCT
GCAAACGGTTTGTCGAAACGATGGTGTAAAGCACGCCTTGTCTCGAAACC
GCGTTACTGCCGCACACCGAGCAGTGCCTCTACACGTTCATCCCCTCTCC
CGTCCCGTCCCCCCAACTCCAAAAACACGCAGCCCCTTGTGTGTCTTCGG
CTCGTCGAAAACATGTTAGGTAGTGCCTGTGAAGCACGTCTTCATCACGC
ACGGGCACCTGGATCACAGTGGGGCCGTGGTGTCCCATGCTCGGCTGAGG
GGACAGTCGCAGGGTTCGCCAGCCAAGTACTACATGCTCGCAGAATTGGC
TGCAGGAATTAAAAAGGTTGGTACAAACGAAGGAATACTCGTGCCTTATT
ACCATGTAAGTAACTGGCCTTGATCATCGGGGAGACGTTCACCTATGTCC
CGTCCCAGTCACCCGGAGCAGACAAGAAGGCCTGGATATATACGAGGTTG
TCTCGGTGTGTTACGTGTCTTGATTGATTGAAGGGTTGACGAGTTCAGTT
GCCCTAGTTATCATATGATAAGCGAACGAGGCGTTGGGGGTTCAAAAAGA
TAGATATTTTTCAGAGCGTTTCAAGAAAGCGCGGCTGCCTCGGAAGGCGA
GGTAATTTGAAATAGGCGAACTGTCCGCTTTGCTTTAAGACGCGATGCGC
GCGGGTGTGAATATGTGGGCATGTTTTGATTGTGTAAAACACCTACGTGC
AGGTAAAAGAGGCGTTCGAGGAGATCGAGGAGGCCAAAATAGCGATGGAA
CTCATCGCGGTAGGCCCCGATGACAGCATCGATTTAGGGCAGGGTTGCTT
TGTTCGACCCTTCTTGGTGCAGCATAAGTGAGTTAGGTACAGGTCAGGGG
CAAAGCCAGCTCCAGAAGAGTGTCGGTGGGATGTTGGAGGGAGGGCGGAG
GGCACACATTTTCCGCCACGAGGGTTCGAGAACATCCATATCCAATCGCT
GACGTGTGACGACCCTAATGGTGGGATAAAGTCATTAATATCGGTATAAC
GGTGGTAACTACGCCCTGCAGTCAATAATGACCTCACTTCCTTGCCATCG
CTCGGAGCAAACACACGATACCCGGGGCCACCTCCAAAGCATCGTCCGAT
GGTGCAGATACGTTACCCTTCGAATTTCTCGATTTCTGCGACACCGCATC
CAAGGCACTTTTTTTTATCCAGAAGCGTTTTCTGCTTGAGGTCCCGCCAC
TGTTGTCTTCGCGACACGCTGGGACAGTCAATCGTCAGCCGGCTCCTACG
TGTGTCTGTCTGCCTTGTAGGGTGGAAGCTCTGGGATTCGCGCTCATCAG
GCGAAGATCGGAAAGCCTTAAGCCAGAGTACCGAGGCATGGAGGGAAAGG
CTTTGGGTGCCCTCAAGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig17228:4907..7326+

>mRNA_H-elongata_contig17228.4453.1 ID=mRNA_H-elongata_contig17228.4453.1|Name=mRNA_H-elongata_contig17228.4453.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2310bp|location=Sequence derived from alignment at H-elongata_contig17228:4907..7326+ (Himanthalia elongata Himel1 dioecious)
ATGGCCGCTCTTGCCACAGCGATCTTGCGCGGCCTAACTTCACCAACCCA
CTTGAATGAGATGGTGTCACGCGGGCCTGAGGTTGCCAATCTCGACTACT
GCGACCCTCTTGGGCGACGCTTGATCCACATCGCGGCAGATGCTGGTGAT
GTCTCGGCGCTACGCTGGCTTATTGAGCGTGGGTCGGATCCGAGAGCAAC
AACATCTACGGAGGGAAACACAGCCCTGCACATAGCGGCTTCAGAGGGCC
ATCGAGAAGCTGTAAGGTATCTTCTGGAGGAGGTGTCCATGGGCGTGGCG
GGGCTAAATCTCGCGGGCGAGACAGCGCTCGACGTTGCCATCACTGAGGA
CCATGGGAGTATCGTGGCTGACTTAACGCGACACTTACGCCCTCTACCCG
TTCCATTAAAGGGACATGAGCAGACGCAGAATGAGGAATCGGTCGCAAGC
CGAGACCCACAGCGGAAGTACGCAGAGAAGCCTAAACCGAGCGTGGGCGT
GACACCTCCAGTTCCTGCCGCTACCGTCAACCGAGATCCTTCCATTCCAA
CCGCCATCTCTAGAGGTGATACAGGAAGTCAAGGACGGTTGATGCCTGCA
TCGGTCGGCGCACGTTCGGACGGACAGAAGCGGTCGTTCGATGACCGAGG
TGTGACGCAAGGGGGCCTTTTCGTTAGCGGAGCTTGGTCCAAAGCCGGCG
TTTGCTCATGTTTTAACGTCCGACACCGGAATCTTCTCAACAAACACGGC
GTTGTCTTTGACATGGGGGTTTGCCCTTCCGAGATGGCCGCTCTTGCCAC
AGCGATCTTGCGCGGCCTAACTTCACCAACCCACTTGAATGAGATGGTGT
CACGCGGGCCTGAGGTTGCCAATCTCGACTACTGCGACCCTCTTGGGCGA
CGCTTGATCCACATCGCGGCAGATGCTGGTGATGTCTCGGCGCTACGCTG
GCTTATTGAGCGTGGGTCGGATCCGAGAGCAACAACATCTACGGAGGGAA
ACACAGCCCTGCACATAGCGGCTTCAGAGGGCCATCGAGAAGCTGTAAGG
TATCTTCTGGAGGAGGTGTCCATGGGCGTGGCGGGGCTAAATCTCGCGGG
CGAGACAGCGCTCGACGTTGCCATCACTGAGGACCATGGGAGTATCGTGG
CTGACTTAACGCGACACTTACGCCCTCTACCCGTTCCATTAAAGGGACAT
GAGCAGACGCAGAATGAGGAATCGGTCGCAAGCCGAGACCCACAGCGGAA
GTACGCAGAGAAGCCTAAACCGAGCGTGGGCGTGACACCTCCAGTTCCTG
CCGCTACCGTCAACCGAGATCCTTCCATTCCAACCGCCATCTCTAGAGGT
GATACAGGAAGTCAAGGACGGTTGATGCCTGCATCGGTCGGCGCACGTTC
GGACGGACAGAAGCGGTCGTTCGATGACCGAGGTGTGACGCAAGGGGGCC
TTTTCGTTAGCGGAGCTTGGTCCAAAGCCGGCGTTTGCTCATGTTTTAAC
GTCCGACACCGGAATCTTCTCAACAAACACGGCGTTGTCTTTGACATGGG
GGTTTGCCCTTCCGAGGTAGTGCCTGTGAAGCACGTCTTCATCACGCACG
GGCACCTGGATCACAGTGGGGCCGTGGTGTCCCATGCTCGGCTGAGGGGA
CAGTCGCAGGGTTCGCCAGCCAAGTACTACATGCTCGCAGAATTGGCTGC
AGGAATTAAAAAGGTAGTGCCTGTGAAGCACGTCTTCATCACGCACGGGC
ACCTGGATCACAGTGGGGCCGTGGTGTCCCATGCTCGGCTGAGGGGACAG
TCGCAGGGTTCGCCAGCCAAGTACTACATGCTCGCAGAATTGGCTGCAGG
AATTAAAAAGGTAAAAGAGGCGTTCGAGGAGATCGAGGAGGCCAAAATAG
CGATGGAACTCATCGCGGTAGGCCCCGATGACAGCATCGATTTAGGGCAG
GGTTGCTTTGTTCGACCCTTCTTGGTGCAGCATAAGTAAAAGAGGCGTTC
GAGGAGATCGAGGAGGCCAAAATAGCGATGGAACTCATCGCGGTAGGCCC
CGATGACAGCATCGATTTAGGGCAGGGTTGCTTTGTTCGACCCTTCTTGG
TGCAGCATAAGGTGGAAGCTCTGGGATTCGCGCTCATCAGGCGAAGATCG
GAAAGCCTTAAGCCAGAGTACCGAGGCATGGAGGGAAAGGCTTTGGGTGC
CCTCAAGTAAGGTGGAAGCTCTGGGATTCGCGCTCATCAGGCGAAGATCG
GAAAGCCTTAAGCCAGAGTACCGAGGCATGGAGGGAAAGGCTTTGGGTGC
CCTCAAGTAA
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