mRNA_H-elongata_contig172104.4445.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig172104.4445.1
Unique NamemRNA_H-elongata_contig172104.4445.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: D7FLP6_ECTSI (Cation_ATPase_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP6_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 5.020e-82
Identity = 134/180 (74.44%), Postives = 151/180 (83.89%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGG--QYANAFGVIGGG-DPNVDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNGS 531
            +  +S   EISPFIC++TLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVT KLI YAY+QIG++QAAAGFYTWLVV+NDYGYPPHIL+ LGRGDYFG QPLMC+F+GG  QYAN  G I    +P  DPPT DFPLW +G+GGYV  C FPL L   ++G+
Sbjct:  702 YTLTSNIPEISPFICFITLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTKKLIIYAYLQIGVIQAAAGFYTWLVVLNDYGYPPHILIGLGRGDYFGKQPLMCKFAGGGGQYANTKGEINTELNPLTDPPTLDFPLWDTGAGGYVDTCYFPLKLVDENSGT 881
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: A0A7R9U5E7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5E7_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.830e-69
Identity = 114/177 (64.41%), Postives = 137/177 (77.40%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGGQYANAFGVIGGG-DPNVDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNG 528
            +  +S   EI+PF+C++TL TP PL T+LILAIDLGTD+VPAISM+YE+AEADIM+RPPRNS +DRLVT KLIF AY+QIGIMQA AGFYTWLVV+NDYGYPPHIL  + RG+ FG Q L CRFSGGQY N  G I    DP+  PP+ ++PLW  G GGY+IDCE+  +   G  G
Sbjct:  833 YTLTSNIPEITPFLCFVTLSTPLPLPTILILAIDLGTDLVPAISMAYEEAEADIMKRPPRNSKVDRLVTKKLIFLAYLQIGIMQATAGFYTWLVVLNDYGYPPHILPGIDRGEMFGRQVLFCRFSGGQYVNKDGEIDPTRDPSEVPPSVEYPLWDRGDGGYIIDCEYSATNLIGPGG 1009
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: A0A7S2Y0U5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0U5_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.190e-68
Identity = 111/179 (62.01%), Postives = 139/179 (77.65%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGGQYANAFGVIGG-GDPNVDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNGSP 534
            +  +S   EISPF+C++ + TP PLSTVLILAIDLGTDM+PAISM+YEQAEADIM RPPRN+  DRLVT +LI +AY+QIG++QAA+GFYTW++V+NDYGYPPHIL+ LG G ++G Q L CRFSGGQY N  G I    DP   PP +D+PLW +G  GY+IDCE+P+    G  G+P
Sbjct:  753 YTLTSNIPEISPFLCWIVIRTPMPLSTVLILAIDLGTDMIPAISMAYEQAEADIMLRPPRNADQDRLVTKRLIVFAYLQIGMIQAASGFYTWMIVLNDYGYPPHILMGLGHGTHWGKQTLFCRFSGGQYVNHKGDIDPLRDPQQVPPGRDYPLWDTGDHGYLIDCEYPVKSYSGGGGAP 931
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: Q9SXK5_HETAK (Na-ATPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=Q9SXK5_HETAK)

HSP 1 Score: 230 bits (587), Expect = 1.370e-66
Identity = 107/179 (59.78%), Postives = 137/179 (76.54%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGGQYANAFGVIGGG-DPNVDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNGSP 534
            +  +S   EISPF+C++ +GTP PLSTVLIL IDLGTDMVPAISM+YEQAEADIM+RPPR+S +DRLVT KLI +AY+QIG++QAAAGFYTW+VV+NDYG+PPHIL  LGRG ++   PL C+F GGQY +  G      DP+ D PT+ +P W  G  G +++CEFP+   +G +G P
Sbjct:  822 YTLTSNIPEISPFLCFIVIGTPLPLSTVLILGIDLGTDMVPAISMAYEQAEADIMKRPPRDSQLDRLVTKKLIVFAYLQIGMIQAAAGFYTWMVVLNDYGFPPHILPGLGRGGFWQQHPLYCKFDGGQYVSLDGEASSDLDPSSDAPTRAYPFWDVGDHGNIVNCEFPIKNLRGGSGVP 1000
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: F0YDS7_AURAN (Cation_ATPase_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDS7_AURAN)

HSP 1 Score: 216 bits (551), Expect = 9.810e-62
Identity = 105/190 (55.26%), Postives = 133/190 (70.00%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILL--ELGRGDYFGTQPLMCRFSGGQYANAFGVI--GGGDPNVDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNGSPVRRILLNY 558
            +  +S   EISPF+C++T+ TP PLSTVLILAIDLGTDMVPAISM+YE AEADIM+RPPRN+A D LVT+KLI  AY+QIG+MQA AGFY W++V+NDYG+PP ILL    G G +FG Q + C+F+GGQY N  G I     DP V  P +++P+W  G GGY+  C +P    +G   +P       Y
Sbjct:  839 YTLTSNIPEISPFLCWITMNTPMPLSTVLILAIDLGTDMVPAISMAYEDAEADIMKRPPRNAATDHLVTSKLICLAYLQIGVMQAMAGFYAWMLVLNDYGFPPTILLGNPSGAGLFFGEQTMYCKFNGGQYVNGEGEIDPANPDPTVSGPNRNYPMWDRGDGGYIKACTYPAKNFQGGFKAPTENFYYEY 1028
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: A0A7S2VWB4_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWB4_9STRA)

HSP 1 Score: 214 bits (544), Expect = 8.630e-61
Identity = 110/196 (56.12%), Postives = 131/196 (66.84%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGGQYANAFG--------------VIGGGDPN------VDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNG 528
            +  +S   EISPFI  +    P PLSTVLIL IDLGTDM+PAISM+YE AEADIM+RPPRNS +DRLVT KLI  AY+QIGIMQA +GFY ++VV+NDYG+PPH L+ LG  +Y+G QPL CRF GGQY N  G              V GG          +  PT+D+PLW  G GGY+IDCEFP+   KG  G
Sbjct:  837 YTLTSNIPEISPFISQILFDIPLPLSTVLILGIDLGTDMIPAISMAYETAEADIMKRPPRNSKVDRLVTKKLINLAYLQIGIMQAMSGFYVYMVVLNDYGFPPHTLMGLGGSNYWGKQPLYCRFKGGQYVNVEGEGMSTPVEVFTQTHVDGGVTAKKNLGVLMSGPTKDYPLWDRGDGGYIIDCEFPIMNFKGVAG 1032
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: A0A7S2KJ07_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KJ07_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.160e-53
Identity = 94/180 (52.22%), Postives = 123/180 (68.33%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGGQYANAFGVIGGG-DPNVDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNGSPV 537
            +   S   EI+PF+ ++    P PL+T LILAIDLGTDM+PAISM+YE  EADIM RPPRNS  DRLVT ++I ++Y+QIG++QA AGF+T+LVV NDYGY P +L+  G  + +G QP  C+F GG Y N  G +    DP +DPP+ +FP W  G  GY++DC F  +  KG  GS V
Sbjct:  823 YTIQSNIPEITPFLGFIIFAIPLPLTTFLILAIDLGTDMIPAISMAYELPEADIMTRPPRNSKTDRLVTKRMINFSYLQIGLIQAIAGFFTYLVVFNDYGYSPTVLMGRGNTEVWGMQPFFCKFQGGSYVNLAGDLDTTRDPTIDPPSVEFPFWFPGQSGYLVDCGFAHNNYKG-GGSDV 1001
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: A0A8J2T1N8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1N8_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.030e-53
Identity = 98/207 (47.34%), Postives = 125/207 (60.39%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILL-------ELGRGDYFGTQPLMCRFSGGQYANAFGVIGGG----------------------DPNVDPPTQDFPLWHSGSGGYVIDCEFPLSLAKGHNGSP 534
            +  +S   EISPF+C++   TP PLSTVLILAIDLGTDMVPAISM+YE AEADIM+RPPRN+A D LVT KL+  AY+QIG+MQA AGFY W++V+NDYG+PP +L+         G+  +F  Q + C+F GGQY NA G +  G                      DP+   P + +PLW  G  GY+  C F      G   +P
Sbjct:  850 YTLTSNIPEISPFLCWIVFLTPMPLSTVLILAIDLGTDMVPAISMAYEDAEADIMKRPPRNAATDHLVTGKLMCLAYLQIGVMQALAGFYAWMLVLNDYGFPPVVLVGNPGATAPTGKLGFFADQVMYCKFKGGQYVNALGQVDEGQVIAGDKDPWAGSVSVGAGLRRDPSEVGPRRQYPLWDRGDAGYLESCSFAAKNFNGRRAAP 1056
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: A0A812S2G4_9DINO (ATP1A3 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812S2G4_9DINO)

HSP 1 Score: 185 bits (469), Expect = 1.050e-50
Identity = 91/168 (54.17%), Postives = 116/168 (69.05%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGGQYANAFGVIGGGDPNV-DPPTQDFPLWHSGSGGYVIDCEFP 501
            +  SS   EI+PF+C++T+ TP PLSTVLIL IDLGTDMVPAISM++E  EADIMRRPPR+S +DRLVT KL+ +AY+QIG++QAAAGF+TW+VVMNDYG+ PH L  LG  D F  Q + C+ +GG + N  GV      +  D     F  W     G +  C+FP
Sbjct:  899 YTLSSNIPEIAPFLCFITIQTPLPLSTVLILFIDLGTDMVPAISMAWEAKEADIMRRPPRDSLVDRLVTKKLVSFAYLQIGVIQAAAGFFTWIVVMNDYGFAPHTLPGLGANDNFAKQVMYCKLNGGVWRNLDGVAYSASTDAQDAINAGFLFWDPSIHGSIEQCDFP 1066
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BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Match: A0A7S1CP71_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP71_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.180e-46
Identity = 85/168 (50.60%), Postives = 114/168 (67.86%), Query Frame = 1 
Query:    1 FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQAEADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYGYPPHILLELGRGDYFGTQPLMCRFSGGQYANAFGVIGG--GDPNVDPPTQDFPLWHSGSGGYVIDCEF 498
            +  SS   EISPF+ ++TL TP PLSTVLIL IDLGTDMVPAISM++E AE DIM+RP R++++DRLVT KL+ +AY+QIG  QA  GF+TW+VV+NDYG+PP++L+ LG  D +G Q L C+   G + N  G +    G   +D  +  +  W     G V  C+F
Sbjct:  849 YTLSSNIPEISPFLIFITLATPLPLSTVLILCIDLGTDMVPAISMAWENAENDIMKRPARDASVDRLVTKKLVSFAYLQIGTFQAMGGFFTWMVVLNDYGFPPNVLVGLGTFDNWGGQVLYCKLENGVFRNVDGDVFDLRGRDQLDAISAGYFFWDPAFDGSVAACDF 1016
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig172104.4445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP6_ECTSI5.020e-8274.44Cation_ATPase_N domain-containing protein n=2 Tax=... [more]
A0A7R9U5E7_9STRA2.830e-6964.41Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2Y0U5_9STRA1.190e-6862.01Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
Q9SXK5_HETAK1.370e-6659.78Na-ATPase n=1 Tax=Heterosigma akashiwo TaxID=2829 ... [more]
F0YDS7_AURAN9.810e-6255.26Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A7S2VWB4_9STRA8.630e-6156.12Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S2KJ07_9STRA1.160e-5352.22Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A8J2T1N8_9STRA4.030e-5347.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A812S2G4_9DINO1.050e-5054.17ATP1A3 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A... [more]
A0A7S1CP71_9STRA7.180e-4650.60Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig172104contigH-elongata_contig172104:266..1260 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.5
Seed ortholog evalue7.5e-71
Seed eggNOG ortholog2880.D7FLP6
Preferred nameATP4A
KEGG koko:K01539,ko:K01541,ko:K01542,ko:K01544
KEGG TC3.A.3.1,3.A.3.1.2,3.A.3.1.4
KEGG Pathwayko00190,ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04966,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map00190,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04966,map04970,map04971,map04972,map04973,map04974,map04976,map04978
GOsGO:0000003,GO:0000166,GO:0001101,GO:0001504,GO:0001505,GO:0001508,GO:0001540,GO:0001664,GO:0001696,GO:0001700,GO:0001894,GO:0002026,GO:0002028,GO:0002036,GO:0002087,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003018,GO:0003674,GO:0003824,GO:0005102,GO:0005215,GO:0005391,GO:0005488,GO:0005496,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005783,GO:0005794,GO:0005886,GO:0005887,GO:0005889,GO:0005890,GO:0005901,GO:0005911,GO:0005918,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006836,GO:0006873,GO:0006874,GO:0006875,GO:0006883,GO:0006885,GO:0006928,GO:0006936,GO:0006937,GO:0006940,GO:0006941,GO:0006942,GO:0007043,GO:0007154,GO:0007165,GO:0007166,GO:0007215,GO:0007267,GO:0007268,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007416,GO:0007417,GO:0007420,GO:0007424,GO:0007528,GO:0007568,GO:0007586,GO:0007600,GO:0007605,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007626,GO:0007630,GO:0007632,GO:0008015,GO:0008016,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008217,GO:0008289,GO:0008306,GO:0008324,GO:0008340,GO:0008344,GO:0008360,GO:0008542,GO:0008556,GO:0008900,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009314,GO:0009416,GO:0009566,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010107,GO:0010155,GO:0010243,GO:0010248,GO:0010259,GO:0010522,GO:0010644,GO:0010646,GO:0010766,GO:0010817,GO:0010880,GO:0010881,GO:0010882,GO:0010894,GO:0010958,GO:0010959,GO:0012505,GO:0014069,GO:0014070,GO:0014704,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016311,GO:0016323,GO:0016324,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019216,GO:0019218,GO:0019222,GO:0019229,GO:0019637,GO:0019693,GO:0019722,GO:0019725,GO:0019829,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019932,GO:0019953,GO:0019991,GO:0021537,GO:0021543,GO:0021987,GO:0022414,GO:0022600,GO:0022603,GO:0022604,GO:0022607,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030007,GO:0030029,GO:0030030,GO:0030048,GO:0030054,GO:0030315,GO:0030317,GO:0030424,GO:0030425,GO:0030506,GO:0030534,GO:0030554,GO:0030641,GO:0030900,GO:0030955,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031402,GO:0031410,GO:0031420,GO:0031748,GO:0031943,GO:0031944,GO:0031946,GO:0031947,GO:0031982,GO:0032279,GO:0032350,GO:0032351,GO:0032353,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032553,GO:0032555,GO:0032559,GO:0032809,GO:0032870,GO:0032879,GO:0032890,GO:0032970,GO:0032991,GO:0033218,GO:0033993,GO:0034220,GO:0034329,GO:0034330,GO:0034641,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0035094,GO:0035150,GO:0035151,GO:0035152,GO:0035158,GO:0035159,GO:0035235,GO:0035296,GO:0035556,GO:0035637,GO:0035639,GO:0035725,GO:0036094,GO:0036376,GO:0036477,GO:0040007,GO:0040011,GO:0042221,GO:0042277,GO:0042383,GO:0042391,GO:0042493,GO:0042562,GO:0042578,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043197,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043271,GO:0043296,GO:0043297,GO:0043394,GO:0043395,GO:0043492,GO:0043531,GO:0043548,GO:0043576,GO:0044057,GO:0044065,GO:0044070,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044281,GO:0044291,GO:0044297,GO:0044298,GO:0044309,GO:0044326,GO:0044327,GO:0044424,GO:0044425,GO:0044444,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044853,GO:0045121,GO:0045177,GO:0045178,GO:0045202,GO:0045216,GO:0045822,GO:0045823,GO:0045833,GO:0045851,GO:0045932,GO:0045933,GO:0045939,GO:0045988,GO:0045989,GO:0046034,GO:0046483,GO:0046717,GO:0046872,GO:0046873,GO:0046885,GO:0046890,GO:0046903,GO:0046982,GO:0046983,GO:0048232,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048545,GO:0048583,GO:0048589,GO:0048609,GO:0048731,GO:0048856,GO:0048870,GO:0048871,GO:0048878,GO:0050780,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050804,GO:0050808,GO:0050810,GO:0050877,GO:0050880,GO:0050890,GO:0050896,GO:0050905,GO:0050954,GO:0050998,GO:0051049,GO:0051051,GO:0051055,GO:0051087,GO:0051117,GO:0051124,GO:0051128,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051270,GO:0051279,GO:0051282,GO:0051480,GO:0051481,GO:0051580,GO:0051588,GO:0051674,GO:0051704,GO:0051716,GO:0051899,GO:0051924,GO:0051926,GO:0051941,GO:0051946,GO:0051952,GO:0051955,GO:0051966,GO:0055065,GO:0055067,GO:0055074,GO:0055075,GO:0055078,GO:0055080,GO:0055082,GO:0055085,GO:0055086,GO:0055117,GO:0055119,GO:0060047,GO:0060048,GO:0060075,GO:0060081,GO:0060249,GO:0060322,GO:0060341,GO:0060438,GO:0060439,GO:0060541,GO:0061337,GO:0065007,GO:0065008,GO:0065009,GO:0070160,GO:0070252,GO:0070887,GO:0071214,GO:0071229,GO:0071260,GO:0071300,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0072503,GO:0072507,GO:0072521,GO:0080090,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086009,GO:0086010,GO:0086011,GO:0086012,GO:0086013,GO:0086036,GO:0086037,GO:0086064,GO:0086065,GO:0090030,GO:0090032,GO:0090066,GO:0090075,GO:0090257,GO:0090533,GO:0090662,GO:0097066,GO:0097067,GO:0097159,GO:0097367,GO:0097447,GO:0097458,GO:0097574,GO:0097708,GO:0097722,GO:0097746,GO:0098533,GO:0098589,GO:0098590,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098739,GO:0098771,GO:0098794,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0098916,GO:0098984,GO:0099131,GO:0099132,GO:0099177,GO:0099536,GO:0099537,GO:0099572,GO:0099587,GO:0099622,GO:0104004,GO:0106027,GO:0120025,GO:0120036,GO:0120038,GO:0140115,GO:1901019,GO:1901020,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901681,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902305,GO:1902306,GO:1902494,GO:1902495,GO:1902600,GO:1903115,GO:1903169,GO:1903170,GO:1903279,GO:1903280,GO:1903416,GO:1903522,GO:1903523,GO:1903524,GO:1903789,GO:1903959,GO:1904062,GO:1904063,GO:1904645,GO:1904646,GO:1904949,GO:1990239,GO:1990351,GO:1990535,GO:1990573,GO:1990794,GO:2000649,GO:2000650,GO:2001023
EggNOG free text desc.sodium:potassium-exchanging ATPase activity
EggNOG OGsCOG0474@1,KOG0203@2759
EC3.6.3.10,3.6.3.9
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons2
Model size567
Cds size567
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930002.3592129-CDS-H-elongata_contig172104:265..4701622930002.3592129-CDS-H-elongata_contig172104:265..470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig172104 266..470 -
1691679241.458136-CDS-H-elongata_contig172104:265..4701691679241.458136-CDS-H-elongata_contig172104:265..470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig172104 266..470 -
1622930002.3768876-CDS-H-elongata_contig172104:898..12601622930002.3768876-CDS-H-elongata_contig172104:898..1260Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig172104 899..1260 -
1691679241.4719033-CDS-H-elongata_contig172104:898..12601691679241.4719033-CDS-H-elongata_contig172104:898..1260Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig172104 899..1260 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig172104.4445.1prot_H-elongata_contig172104.4445.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig172104 266..1260 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig172104.4445.1

>prot_H-elongata_contig172104.4445.1 ID=prot_H-elongata_contig172104.4445.1|Name=mRNA_H-elongata_contig172104.4445.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
FVSSSGTTEISPFICYLTLGTPPPLSTVLILAIDLGTDMVPAISMSYEQA
EADIMRRPPRNSAIDRLVTTKLIFYAYMQIGIMQAAAGFYTWLVVMNDYG
YPPHILLELGRGDYFGTQPLMCRFSGGQYANAFGVIGGGDPNVDPPTQDF
PLWHSGSGGYVIDCEFPLSLAKGHNGSPVRRILLNYFT*
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mRNA from alignment at H-elongata_contig172104:266..1260-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig172104.4445.1 ID=mRNA_H-elongata_contig172104.4445.1|Name=mRNA_H-elongata_contig172104.4445.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=995bp|location=Sequence derived from alignment at H-elongata_contig172104:266..1260- (Himanthalia elongata Himel1 dioecious)
TTCGTTTCTTCTTCCGGGACAACAGAGATCTCTCCATTTATCTGCTACCT
GACCTTGGGCACGCCGCCTCCTCTCTCGACCGTGCTCATCCTCGCCATCG
ACCTGGGAACCGACATGGTCCCCGCCATCTCCATGTCCTACGAGCAGGCC
GAGGCGGACATCATGCGCCGGCCGCCGAGGAACTCCGCGATCGACCGCCT
CGTGACCACGAAGCTGATCTTTTACGCCTACATGCAGATTGGCATTATGC
AGGCGGCCGCCGGGTTCTACACGTGGCTCGTGGTGATGAACGACTACGGG
TACCCGCCGCACATCCTGCTCGAGCTCGGCCGCGGAGATTACTTTGGGAC
GCAGCCTCTTATGTAGGTTTTGTGTAGGTTGGGATGGTGTACAATGGGGA
GTTGGGATGTACGTCCCTCCTGTTTCGGGAAATAATTAAGGGAGAACCCG
GGGCTTATTTTCTGGTATCCCCGCTTTAAAAATATTTCGGCATTTTCAAT
GTTTAAAAAAACTAACCCATTTAACTATTTTGGAACTAGATTTCAAGGTT
TCCGAAAACGTTTTAGAGGTTGCGGTATCGTAAAGACAGCTAAAAAAAAG
AGAGAGGCCACAGGGATTTTTTTTTCTTCTTTTTTTCTTTTTCCAAACGA
TACTTTTTGTGGTGACCTATTTTTCAATCGGAGGAGGCGTTAAGCTGGAA
GATGCCTTTTAGAGAGGTAGGTAGTCCCCAGAAAAATAATCTTACGCTAA
CCACCCCCCCCCGTTTTATATCACGATCCGCACGCTGCAGGTGCCGGTTC
AGCGGTGGTCAGTACGCTAACGCCTTTGGTGTAATCGGCGGTGGTGACCC
CAACGTGGATCCCCCGACTCAGGATTTCCCCCTGTGGCACAGCGGCTCCG
GTGGCTACGTCATCGACTGCGAGTTTCCGTTATCTTTGGCGAAGGGACAC
AATGGCTCACCGGTACGTAGAATATTGTTAAATTATTTTACTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig172104:266..1260-

>mRNA_H-elongata_contig172104.4445.1 ID=mRNA_H-elongata_contig172104.4445.1|Name=mRNA_H-elongata_contig172104.4445.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1134bp|location=Sequence derived from alignment at H-elongata_contig172104:266..1260- (Himanthalia elongata Himel1 dioecious)
TTCGTTTCTTCTTCCGGGACAACAGAGATCTCTCCATTTATCTGCTACCT
GACCTTGGGCACGCCGCCTCCTCTCTCGACCGTGCTCATCCTCGCCATCG
ACCTGGGAACCGACATGGTCCCCGCCATCTCCATGTCCTACGAGCAGGCC
GAGGCGGACATCATGCGCCGGCCGCCGAGGAACTCCGCGATCGACCGCCT
CGTGACCACGAAGCTGATCTTTTACGCCTACATGCAGATTGGCATTATGC
AGGCGGCCGCCGGGTTCTACACGTGGCTCGTGGTGATGAACGACTACGGG
TACCCGCCGCACATCCTGCTCGAGCTCGGCCGCGGAGATTACTTTGGGAC
GCAGCCTCTTATTTCGTTTCTTCTTCCGGGACAACAGAGATCTCTCCATT
TATCTGCTACCTGACCTTGGGCACGCCGCCTCCTCTCTCGACCGTGCTCA
TCCTCGCCATCGACCTGGGAACCGACATGGTCCCCGCCATCTCCATGTCC
TACGAGCAGGCCGAGGCGGACATCATGCGCCGGCCGCCGAGGAACTCCGC
GATCGACCGCCTCGTGACCACGAAGCTGATCTTTTACGCCTACATGCAGA
TTGGCATTATGCAGGCGGCCGCCGGGTTCTACACGTGGCTCGTGGTGATG
AACGACTACGGGTACCCGCCGCACATCCTGCTCGAGCTCGGCCGCGGAGA
TTACTTTGGGACGCAGCCTCTTATGTGCCGGTTCAGCGGTGGTCAGTACG
CTAACGCCTTTGGTGTAATCGGCGGTGGTGACCCCAACGTGGATCCCCCG
ACTCAGGATTTCCCCCTGTGGCACAGCGGCTCCGGTGGCTACGTCATCGA
CTGCGAGTTTCCGTTATCTTTGGCGAAGGGACACAATGGCTCACCGGTAC
GTAGAATATTGTTAAATTATTTTACTTGAGTGCCGGTTCAGCGGTGGTCA
GTACGCTAACGCCTTTGGTGTAATCGGCGGTGGTGACCCCAACGTGGATC
CCCCGACTCAGGATTTCCCCCTGTGGCACAGCGGCTCCGGTGGCTACGTC
ATCGACTGCGAGTTTCCGTTATCTTTGGCGAAGGGACACAATGGCTCACC
GGTACGTAGAATATTGTTAAATTATTTTACTTGA
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