mRNA_H-elongata_contig17209.4443.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: D7FQE3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE3_ECTSI) HSP 1 Score: 283 bits (723), Expect = 2.270e-94 Identity = 138/171 (80.70%), Postives = 148/171 (86.55%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPEVADSSG--PISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENSINTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGRKMSGG 507
YGSELFGN++GL +K PE A SS PISRADA ARLK+DFDR+YFVTGQMDLDLYE +C FADPFVAFEGR RFKNNLDNLGSLMQDV+LDVTSWEE E SI TKWRFRCVLGLPWKPTLAA+GGTE FFNQ SGRIERHVESW+I+PIDALKQLIRPGRK S G
Sbjct: 85 YGSELFGNIIGLGKKKE----PEEASSSTAEPISRADAVARLKTDFDRFYFVTGQMDLDLYEPECVFADPFVAFEGRDRFKNNLDNLGSLMQDVSLDVTSWEEAEASIKTKWRFRCVLGLPWKPTLAAAGGTEFFFNQESGRIERHVESWEIEPIDALKQLIRPGRKKSSG 251
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A7S2V2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2T3_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.410e-60 Identity = 91/168 (54.17%), Postives = 123/168 (73.21%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKS--DKPSPEVADSSGPISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENSI-NTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGRK 495
Y SE FG+++ L KS +P+ S +S A +L++D+DR YFVTGQ+D LY EDC FADPFV+F+G QRFK NLDNLG M++V L +T W++ E + TKWRF CVLGLPW+P+LAA+GGT+ FF + SG++ +HVE W+I+P+DALKQ+IRPGR+
Sbjct: 64 YASEAFGDIVSLFRGKSAESEPAKIPEGKSEKLSWAGTVEKLRADYDRCYFVTGQLDPSLYLEDCEFADPFVSFKGLQRFKKNLDNLGPFMENVNLKITDWDDSEPGVVRTKWRFSCVLGLPWRPSLAAAGGTDHFFEEQSGKMIKHVEKWEIEPLDALKQIIRPGRE 231
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A7S3C8L5_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C8L5_9CHLO) HSP 1 Score: 192 bits (489), Expect = 1.610e-59 Identity = 97/175 (55.43%), Postives = 123/175 (70.29%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKS--DKPSPEVADSSGPISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWE--ERENSINTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGR--KMSGG 507
Y SE FG+V L ++ D S ++ +GP S A+A RL+ D+DR YFVTGQMD+ LY+EDC FADPFV+F G RFK NLDNLGS M+DV L VT+++ E + + TKW FRC LGLPW+P+L+ASGGT+ FN R+ HVESWDI P ALKQL+RPG+ K +GG
Sbjct: 28 YASEAFGDVTALFRKRGSFDASSSASSEEAGPASFAEAVDRLREDYDRAYFVTGQMDIPLYQEDCEFADPFVSFRGVSRFKKNLDNLGSFMRDVRLTVTAFDASEVDGVVQTKWSFRCELGLPWRPSLSASGGTKHVFN-AQNRMVEHVESWDIDPAVALKQLVRPGKRQKKTGG 201
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A1Y1II82_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1II82_KLENI) HSP 1 Score: 191 bits (485), Expect = 3.320e-58 Identity = 87/167 (52.10%), Postives = 112/167 (67.07%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPEVADSSG-PISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENSINTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGRKM 498
Y SE FG + K DK + D + P+S + A L++D+D+ YFVTG M +Y++DC FADPF +F G RFK N+ NLGS M++V L +T W+E EN I KWRFRCVLGLPW+P LAASGGTE +F+ S +I +HVESWDI P D L+QLI+P K
Sbjct: 85 YASEAFGQAVAAFRPKKDKEEEDEIDEAVLPLSHEEVVALLRADYDKSYFVTGDMTTRIYDKDCEFADPFASFRGLYRFKRNVSNLGSFMEEVNLTITDWQESENKIAAKWRFRCVLGLPWRPILAASGGTEHYFDPTSKKIVKHVESWDISPADGLRQLIKPNPKQ 251
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A388LG93_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LG93_CHABU) HSP 1 Score: 192 bits (488), Expect = 4.880e-58 Identity = 85/168 (50.60%), Postives = 118/168 (70.24%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPE--VADSSGPISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENSINTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGRKM 498
Y SE FG + L + + E + G +SR +A A L++D++R YFVTG+M + +YEEDC FADPFV+F+GRQRFK N+ NLGS M++V L V W+E E+ + TKWRF CVL LPW+P LAASGGT+ +F++ +G+I +HVE WDI P D ++QL +P K+
Sbjct: 128 YASEAFGKAVALVRGPNKEREDEDWEEEEEGRLSREEAIAALRADYNRSYFVTGKMSMGIYEEDCEFADPFVSFKGRQRFKQNVSNLGSFMREVNLTVVDWQEAEDKLTTKWRFSCVLALPWRPILAASGGTDHYFDKETGKIYKHVERWDISPADGVRQLFKPNPKL 295
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A2R6W4T3_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W4T3_MARPO) HSP 1 Score: 189 bits (479), Expect = 2.050e-57 Identity = 88/168 (52.38%), Postives = 114/168 (67.86%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPEVADSSG------PISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENSINTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRP 486
YGSE FGN + KS + + AD G P+SR DA +K DFDR YFVTG M +YE DC FADPFV+F+G +RF+ N+ NLGS M++ +L +T W+E E+ I +WRF CVL LPW+P LAA+G TE FFN+ SG+I +HVESWDI P D ++QL +P
Sbjct: 76 YGSEAFGNAVATFRPKSGE---DQADDDGELKFDGPVSREDAVDLIKKDFDRSYFVTGNMATGIYENDCEFADPFVSFKGLKRFRQNVGNLGSFMEESSLKLTEWQEYEDRIYARWRFNCVLSLPWRPILAATGSTEYFFNKDSGKIYKHVESWDISPADGVRQLFKP 240
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A0G4FT86_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FT86_9ALVE) HSP 1 Score: 189 bits (481), Expect = 2.410e-57 Identity = 94/184 (51.09%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPEVAD---SSGPISRA----DASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENS------------INTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGRK 495
+ SE FG+ +G R + EV ++G ++A A RL+ D+DR YFVTG MDLDLYE DC FADPFV+F G RFK NLDNLG+ M+DV L +T W+ ++ + TKWRFRC LGLPW+PTLAA GGT+ +F+ +GRI RHVE WDI P DALKQL+RPG++
Sbjct: 90 FASEAFGDAVGFLKRGGS--AAEVGGQGAATGQTAKALPFSQAQERLRKDYDRVYFVTGDMDLDLYEADCLFADPFVSFTGLSRFKKNLDNLGAFMEDVDLKLTDWKTKKEQMEETNAKTKADVVRTKWRFRCTLGLPWRPTLAARGGTDHYFSPDTGRIVRHVEQWDIDPWDALKQLLRPGKQ 271
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A5B8MIF2_9CHLO (Uncharacterized protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIF2_9CHLO) HSP 1 Score: 182 bits (463), Expect = 2.540e-55 Identity = 91/169 (53.85%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPEVA---DSSGPISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEE--RENSINTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGR 492
Y SE FG+ + L + D + I+ +A RL+ D+DR YFVTG+MDL LYEEDC FADPFV+F G RFK NLDNLG+LM+DVTL V S+EE E +++TKW+F+CVLGLPW P L+ASGGT+ FN+ R+ +HVESWDI P AL+QL+ PG+
Sbjct: 51 YASEAFGDAVALVRGRGDGGDATATTGEEKKNIIAWDEAVQRLRDDYDRTYFVTGKMDLGLYEEDCEFADPFVSFRGVARFKKNLDNLGALMKDVTLVVDSFEEIEEEGTVSTKWKFKCVLGLPWSPRLSASGGTKHVFNR-ENRMVQHVESWDIDPSVALRQLVTPGK 218
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A0G4FHR5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FHR5_VITBC) HSP 1 Score: 180 bits (456), Expect = 2.130e-53 Identity = 87/172 (50.58%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPEVADSSGPISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENS-----INTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGRKMS 501
Y SE G V L K ++ P++ DA RL+ D DR YFV G MDLDLYE DCTF DPFV+F G RFK NLDNL M + L +T W E I TKWRFR V+G+PW+P LAA+GGT+ +F+ G+ R+ RHVESWDI+ DALKQL+RP S
Sbjct: 89 YASEKLGEVTALFRPKQPANDAQIVGQREPLNLDDAKQRLRGDLDRMYFVNGDMDLDLYEPDCTFEDPFVSFTGLSRFKKNLDNLAPFMTEGDLTLTKWTEDTAPDGGLIIRTKWRFRSVIGVPWQPLLAAAGGTDYYFDAGTNRVSRHVESWDIEVWDALKQLLRPNPAAS 260
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Match: A0A8J9RGA3_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RGA3_9CHLO) HSP 1 Score: 178 bits (451), Expect = 4.860e-52 Identity = 78/165 (47.27%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 1 YGSELFGNVLGLTTRKSDKPSPEVADSSGPISRADASARLKSDFDRYYFVTGQMDLDLYEEDCTFADPFVAFEGRQRFKNNLDNLGSLMQDVTLDVTSWEERENSINTKWRFRCVLGLPWKPTLAASGGTELFFNQGSGRIERHVESWDIKPIDALKQLIRPGRK 495
YG+E FGN++GLT K + S + D +R +A A ++ D+D YFV+G+ ++ YE+DC FADPF F G RFK N+ NLGSLM+D+ LD+ W+E + ++ TKWRF VL LPW+P LAASGGT F++ +GR+ H+ESWD++P +K L+RP +
Sbjct: 96 YGAEAFGNIIGLTKPKDRQKSAD--DLQDVYTREEAVAAIRKDYDTNYFVSGKGEMSAYEKDCLFADPFAGFNGVDRFKKNVSNLGSLMEDIKLDLLDWKETDEALQTKWRFSAVLTLPWRPRLAASGGTTHVFSKETGRVIEHIESWDVEPAAVVKSLLRPSSR 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17209.4443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17209.4443.1 >prot_H-elongata_contig17209.4443.1 ID=prot_H-elongata_contig17209.4443.1|Name=mRNA_H-elongata_contig17209.4443.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp YGSELFGNVLGLTTRKSDKPSPEVADSSGPISRADASARLKSDFDRYYFVback to top mRNA from alignment at H-elongata_contig17209:324..1581- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17209.4443.1 ID=mRNA_H-elongata_contig17209.4443.1|Name=mRNA_H-elongata_contig17209.4443.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1258bp|location=Sequence derived from alignment at H-elongata_contig17209:324..1581- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17209:324..1581- >mRNA_H-elongata_contig17209.4443.1 ID=mRNA_H-elongata_contig17209.4443.1|Name=mRNA_H-elongata_contig17209.4443.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig17209:324..1581- (Himanthalia elongata Himel1 dioecious)back to top |