mRNA_H-elongata_contig17199.4431.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: D8LGT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT9_ECTSI) HSP 1 Score: 311 bits (796), Expect = 5.660e-101 Identity = 173/317 (54.57%), Postives = 216/317 (68.14%), Query Frame = 1
Query: 7 SENLNLTKANLVAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSA----SRRFALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSG--------VGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSKKIDDDILRTWKWGSDDPQASFQCFFPAGWSFKYVPYATPGEFPDGAGYSLGYKGRK-AYVIGY 918
S NL+LT ++ VA+SSR+IAAARA+ESRR DRLF+D +AELL G ++ + + S+ P A +A D RR A+RTRF DDFFEDC P+ IKQIVSLGAGMDTRGLRLRAS T VFE+DQALVL VK ++L A+ V L+G VG+ V+ VEADL W+GEL +AGFDP+LPSAWILEGLTMYLEE+E+ LL+++A L S GSAFCATC+SAE ++R++ ++ WKWGSD+PQA F+ FP GWSF V TPGEFP GA Y +G+ G+ AYVIGY
Sbjct: 69 SSNLDLTSSDTVAYSSRMIAAARALESRRRDRLFDDPYAELLAGPDA-MQTVEDKAQEESSLPPLEATAAATAAAASDGVPRDVQRRLAIRTRFCDDFFEDCA-GPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKGALLTQAAAAD-EVAAALAGFRERRDGGVGQGRVVPVEADLSVEGWQGELFEAGFDPSLPSAWILEGLTMYLEEKELVALLRVLASLSSPGSAFCATCVSAESVERAQNSASPLMGRWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPQGADYGVGFVGKAPAYVIGY 382
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: D7FXP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP3_ECTSI) HSP 1 Score: 227 bits (579), Expect = 2.230e-69 Identity = 127/231 (54.98%), Postives = 155/231 (67.10%), Query Frame = 1
Query: 253 RFALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSG--------VGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSKKIDDDILRTWKWGSDDPQASFQCFFPAGWSFKYVPYATPGEFPDGAGYSLGYKGRKA-YVIGY 918
R A+RTRF DDFFEDC P+ IKQIVSLGAGMDTRGLR RAS T VFE+DQALVL VK ++L A+ V L+G VG+ V+ V+A L W+GEL +AG DP+LPSAWILEGL MYLEE+E+ LL+++A L S GSAFCAT +SAE ++R+ + WK GSD P A F+ P GWSF V TPGEFP+GA Y + + G+ A YVIGY
Sbjct: 59 RLAIRTRFCDDFFEDCA-GPRGIKQIVSLGAGMDTRGLRRRASGDTKVFEVDQALVLRVKSALLTQAAAAD-EVAAALAGFRERRDGGVGQGRVVPVQAALSVEGWQGELFEAGSDPSLPSAWILEGLNMYLEEKELVALLRVLASLSSPGSAFCATYVSAESVERTHISASPPMGRWKRGSDKPPAFFEANSPQGWSFNGVTCGTPGEFPEGADYGVDFVGKAAAYVIGY 287
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: A0A4Q9J1I0_9CYAN (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Westiellopsis TaxID=221285 RepID=A0A4Q9J1I0_9CYAN) HSP 1 Score: 129 bits (325), Expect = 3.780e-32 Identity = 87/251 (34.66%), Postives = 132/251 (52.59%), Query Frame = 1
Query: 34 NLVAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRFALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSKKIDDDILRTWKWGSDDPQ 786
+LV+ SSR++AA RAIE++RPD LF D A +L G + E IA S + + GT V A+RTRF DDF I+Q+V LGAGMDTR RL T ++E+D+ VL K S+L R +E D+ ++ W +L+ +G+ P +PS W++EG YL E ++ +LL+ + KL + GS F A I++ + +S D++ + WK+G D+P+
Sbjct: 3 DLVSLSSRMMAAVRAIETQRPDGLFKDPLAAILAGDDIIAE-IAPSAQ------QYEDQGTPV-----------VAVRTRFFDDFLMSQV---DQIRQVVILGAGMDTRAFRLPWQRDTHLYELDRKEVLQYKESVLGNIQSRCTRHS-------------IEVDIKES-WADKLIGSGYLPEIPSVWVMEGFVYYLSETQVHELLKTITKLSAPGSWFLADLINSFFVSKST---DELSKHWKYGCDEPE 215
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: UPI00168372B7 (SAM-dependent methyltransferase n=1 Tax=Calothrix sp. FACHB-156 TaxID=2692779 RepID=UPI00168372B7) HSP 1 Score: 127 bits (319), Expect = 2.660e-31 Identity = 95/280 (33.93%), Postives = 138/280 (49.29%), Query Frame = 1
Query: 40 VAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRF-ALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSKKIDDDILRTWKWGSDDPQASFQCFFPAGWSFKYVPYATPGEFPDGAGY 876
V+F++++IAA RAIES+RP+ LF+D A L G +EA E E D R F ++R RF DDF + +I+QIV LGAGMDTR RL T ++EIDQ V+ K S+L G + + T+S DL ++ W L++ GF + P+ WILEG YL +E LL+ + L + GS CA I++ S D+ + W++G D+P++ F + GW + PGE DGA +
Sbjct: 9 VSFTAKVIAAGRAIESQRPNALFSDPLAAKLAGQEA-IEAALPKVE------------------EYDKQGRPFLSVRARFFDDFINKHS---DNIRQIVILGAGMDTRAFRLNWQPNTHIYEIDQQDVILYKESVLTGINSQCAR--HTIS-----------TDLKESHWTELLIKEGFKTSEPTIWILEGFLYYLNAMAVENLLKNIQVLSAKGSYLCADVINSLICNGS----DEWAKYWQFGCDEPESFFATY---GWQASAI---QPGE--DGASF 241
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: A0A7C9TT70_9CYAN (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TT70_9CYAN) HSP 1 Score: 127 bits (319), Expect = 2.920e-31 Identity = 89/260 (34.23%), Postives = 131/260 (50.38%), Query Frame = 1
Query: 34 NLVAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRFALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRS------KKIDDDILRTWKWGSDDPQASF 795
++V+ SS+++AA RA+E++RPDRLF D +A L G+ + + E G R +RTRF DDF I QIV LGAGMDTR RL T ++E+D+ VL K SIL + KA I V ADLGQA W +LL GF P P+ W+LEGL YL E E++ LL+ +++L + GS A ++ + ++ + + D ++W++G D+P+ F
Sbjct: 6 DIVSRSSQLMAAIRALETKRPDRLFEDPYAAQLAGSEIIAQVEPKLKEYG---------------------IRYVEVRTRFFDDFMVSSA---SQIGQIVILGAGMDTRAFRLPWPPETRLYELDRLEVLQKKESILQDSPA-------------KALRICVAADLGQA-WSSQLLATGFQPEQPTLWLLEGLIYYLNETEVDLLLKTISELSAIGSCLGADLLNVKLIQEAVTEWSQSYLGDLPEKSWRYGCDEPEKLF 227
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: UPI001F049D51 (SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. MUM 178J TaxID=2791991 RepID=UPI001F049D51) HSP 1 Score: 127 bits (318), Expect = 7.050e-31 Identity = 94/259 (36.29%), Postives = 132/259 (50.97%), Query Frame = 1
Query: 49 SSRIIAAARAIESRRPDRLFNDWFAELLPG--ASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRF---ALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAE--CLKRSKKIDDDILR---TWKWGSDDPQASF 795
+S + AA RA E+RRPDRL+ D +AE L G + + T + P +A D + R R A+RTR+ DD L + + QIVS +GMD R RL G FEID+A VL KR LA A V +A V ADL +WE L+ AG+DPALPSAW+LEG+ YL E+ + +LL + ++ + GS A ++A L +++ D R W++G+DDP+A F
Sbjct: 11 TSLLTAAMRAEETRRPDRLYTDPYAETLCGDLGPALLAELQDGTHGSAPAPVPAAGAGDRNG--RHPMPRPLDVNAIRTRYFDDRL---LLAARDVPQIVSAASGMDARAYRLHWPPGLRYFEIDRAAVLAYKRDRLADA-------------VPRAEHRAVAADLTSPDWEARLVDAGYDPALPSAWLLEGMLYYLPEEAVCRLLDRIRRITAPGSVLAADLVNAAGLTLPQARGQLDVFARWGCPWQYGADDPEALF 251
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: A0A2N3VS80_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A2N3VS80_9ACTN) HSP 1 Score: 127 bits (319), Expect = 8.940e-31 Identity = 99/281 (35.23%), Postives = 141/281 (50.18%), Query Frame = 1
Query: 58 IIAAARAIESRRPDRLFNDWFAELL---PGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRFALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSK-----KIDDDILRTWKWGSDDPQASFQCFFPAGWSFKYV----PYATPGEFPD 864
+ AA RA E+RRPDR++ D +A+ L G L E I +T P A T S P+ + A+RTRF DD+ ++ P ++QIV AGMD+R RL G +E+D+ VL K+ L G S RT T V DL +WE +LL AG+DPALPS W+LEGL Y+ EQ+ ++L+ VA + GS A ++A L + +I W +G+D+P+A F F G+S + + P A G +PD
Sbjct: 52 LTAALRAAETRRPDRIYQDPYADALCGETGPELLAE-IRQATFPAD------ASRTLPSTPDYN------AIRTRFFDDYLQEAAREP-GMRQIVLAPAGMDSRAYRLDWPEGLRYYEVDRPAVLAYKKDRLEGVSPRTDH--RT-----------VAVDLTSPDWEDDLLAAGYDPALPSTWLLEGLLYYIPEQDTHRILRRVADFSAPGSRIAADLVNAAALTLPQMRGLLEIFAGWGCPWLFGTDEPEALFDSF---GFSVEALQPGEPGADFGRWPD 302
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: A0A7C9TUH9_9CYAN (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TUH9_9CYAN) HSP 1 Score: 125 bits (313), Expect = 2.000e-30 Identity = 92/255 (36.08%), Postives = 132/255 (51.76%), Query Frame = 1
Query: 34 NLVAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRFA-LRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSKKIDDDILRTWKWGSDDPQASF 795
++V+ SS+ +AA RA+E++RPDRLF+D +AE L GA + + K G D ER R FA +RTRF DDF P I QIV LGAGMDTR RL T ++E+D+ VL K SIL K I V A+LGQ W +L+ AGF P+ W+LEG YL++ E+ LL +++L + GS+ I+ +K ++ +++ R W++G D P+ F
Sbjct: 6 DIVSRSSQFMAAVRALETKRPDRLFDDPYAERLAGAEIIAQV------------KPILKGAD----ER---GRPFAAVRTRFFDDFLFSLASP---INQIVILGAGMDTRAFRLPWHPETCIYELDRPEVLQKKESILQDTPA-------------KCQRICVAANLGQL-WYSQLIAAGFQAEKPALWLLEGFLYYLKDTEVYSLLNQISELSAIGSSLGTDLIN---IKMLQEAGNELSRRWRYGCDRPEELF 221
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: UPI00036327E6 (SAM-dependent methyltransferase n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00036327E6) HSP 1 Score: 124 bits (311), Expect = 3.490e-30 Identity = 89/269 (33.09%), Postives = 131/269 (48.70%), Query Frame = 1
Query: 34 NLVAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRFALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSKKIDDDILRTWKWGSDDPQASFQCFFPAGWSFKYVPY 840
N V+ +SR +AA RAIE +RPDRLF+D AE L GA + E + E D A+RTRF DDF SI+Q+V LGAGMDTR RL T ++EIDQ V+ +K S+L ++ + VI ++ + W +LLQ GF+ PS W+LEG+ YL + + LL+ + L + GS A ++ ++ +K D+ + + W +G D+P+ F F GW V +
Sbjct: 3 NKVSLTSRYMAAVRAIEHQRPDRLFSDPLAEKLAGAEIIAEIAPRAQE------------------YEDRGRPVVAVRTRFFDDFLMSSA---SSIRQVVILGAGMDTRAFRLPWHPDTYLYEIDQPDVIQLKESLL-----------DSTPAICHRQVIPIDL---RESWSEKLLQKGFETKSPSIWLLEGVLYYLTKTDACDLLKTITDLSTDGSFLGADVLN----EKMQKSDNGLAKYWLFGFDEPEKLFASF---GWQADVVQF 229
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Match: E0UMT5_GLOV7 (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Gloeothece verrucosa (strain PCC 7822) TaxID=497965 RepID=E0UMT5_GLOV7) HSP 1 Score: 124 bits (311), Expect = 3.920e-30 Identity = 90/253 (35.57%), Postives = 128/253 (50.59%), Query Frame = 1
Query: 40 VAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNVEAIATSTEPGSNCPKQSADGTDVSAPERDSASRRF-ALRTRFGDDFFEDCTLPPKSIKQIVSLGAGMDTRGLRLRASAGTTVFEIDQALVLTVKRSILAGASLRTVSVGETLSGVGKAWVIGVEADLGQAEWEGELLQAGFDPALPSAWILEGLTMYLEEQEIEKLLQIVAKLCSSGSAFCATCISAECLKRSKKIDDDILRTWKWGSDDPQASF 795
V F+++++AAARAIESRRP+ LF D FAELL GA AI E + R F A+RTRF DDF + + +Q++ +G+GMDTR RL + T V+EIDQA VL K+S L+G + + + L + ADL + W+ LL G+ P+ PS W+LEGL YL + E+E LL + L GS A ++ S D + W+ +DP++ F
Sbjct: 9 VGFTAKVMAAARAIESRRPNALFIDPFAELLAGAEAISSAIPR-------------------LEEYEKQGRPFIAVRTRFFDDFLLNHS---SCCRQVIIVGSGMDTRAFRLNWKSDTHVYEIDQASVLQYKQSCLSGMAPQC---HQHL----------IYADLRETLWQKLLLCQGYQPSQPSLWLLEGLLYYLNQDEVENLLVTINHLSVVGSGLAADLMNPVIANGS----DQWAKYWRSSCEDPESLF 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17199.4431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17199.4431.1 >prot_H-elongata_contig17199.4431.1 ID=prot_H-elongata_contig17199.4431.1|Name=mRNA_H-elongata_contig17199.4431.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=309bp ADSENLNLTKANLVAFSSRIIAAARAIESRRPDRLFNDWFAELLPGASLNback to top mRNA from alignment at H-elongata_contig17199:4074..7273+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17199.4431.1 ID=mRNA_H-elongata_contig17199.4431.1|Name=mRNA_H-elongata_contig17199.4431.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3200bp|location=Sequence derived from alignment at H-elongata_contig17199:4074..7273+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17199:4074..7273+ >mRNA_H-elongata_contig17199.4431.1 ID=mRNA_H-elongata_contig17199.4431.1|Name=mRNA_H-elongata_contig17199.4431.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1854bp|location=Sequence derived from alignment at H-elongata_contig17199:4074..7273+ (Himanthalia elongata Himel1 dioecious)back to top |