mRNA_H-elongata_contig1718.4423.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: D7G0X4_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X4_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.840e-31 Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 85 LDRRS---DIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNTPSTRSFQT---MCTLFQDIYLLHYDGAVNELKYAPSEVEEVKLVPVGEL 390
L +RS D +PGMWDVSVGGHF+AG+ SLETA+KET EELG+ CD+ SL FV V T + +C ++DIYLL +DG V +LK++PSEVE+VKLVP+ L
Sbjct: 38 LQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETDEELGLSCDESSLRFVCTVATTAKGSTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQAL 145
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: A0A835YMT5_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMT5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.520e-22 Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 85 LDRRS---DIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNTP---STRSFQTMCTLFQDIYLLHYDGAVNELKYAPSEVEEVKLVPVGELE 393
+ RRS D YPGMWDVSVGGH +AGD SL TA KET EELGI +D L F+ + + + R C ++D+Y+L Y+G + E+ ++ EVEEV+ P ++E
Sbjct: 20 MQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVE 128
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: A0A7S0NEA1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NEA1_9CRYP) HSP 1 Score: 89.7 bits (221), Expect = 2.960e-19 Identity = 41/97 (42.27%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 100 DIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVL-----NTPSTRSFQTMCTLFQDIYLLHYDGAVNELKYAPSEVEEVKLV 375
D +PG WDVS+ GH S+GD+ +ETA+KE EELG++ +++ L ++ + ++P T F +C ++DI+LL YDG++ +LK+AP EV+ V V
Sbjct: 118 DTFPGKWDVSIAGHVSSGDSVIETAMKEAKEELGLDVEEEQLEYLGTIATSMRGSSPITGDF--LCNEYKDIFLLKYDGSLEDLKFAPEEVQAVSRV 212
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: L1JKA1_GUITC (Nudix hydrolase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JKA1_GUITC) HSP 1 Score: 87.0 bits (214), Expect = 3.090e-18 Identity = 46/115 (40.00%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 70 WPYPG-----LDRRS---DIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFV-----SLVLNTPSTRSFQTMCTLFQDIYLLHYDGAVNELKYAPSEVEEVKLV 375
W Y G + +RS D +PG WDVS+ GH S+GD+ +ETA+KE+ EELG++ + L ++ S+ ++P T F +C ++DI+LL Y+G +++LK+AP EV+ V V
Sbjct: 99 WLYDGQGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKESKEELGLDIKKEELEYLGTIATSMAGSSPITGDF--LCNEYKDIFLLKYEGHLDDLKFAPEEVQAVSRV 211
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: A0A7S0QHM2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHM2_9CRYP) HSP 1 Score: 85.9 bits (211), Expect = 1.210e-17 Identity = 53/131 (40.46%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 46 HVTGFHPR----WPYPG-----LDRRSD---IYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNT---PSTRSFQTMCTLFQDIYLLHYDGAVNELKYAPSEVEEVKLVPVGELE 393
H TG R W Y L +RSD +P WDVSVGGH SAGDT +E A++ET EELG++ + L FV+ V T S + C ++D++L YDG L YAP EV V E+E
Sbjct: 108 HATGTWHRAVHIWLYNSKGQILLQKRSDEKDTFPSKWDVSVGGHLSAGDTVVEAALRETEEELGLKIGEGDLAFVATVATTVAGSSAKQGAFTCNEYKDLFLARYDGPAEALVYAPDEVAGVAWRDADEVE 238
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: A0A1G2M3F6_9BACT (Nudix hydrolase domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_46_22b TaxID=1802301 RepID=A0A1G2M3F6_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 4.940e-15 Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 1
Query: 94 RSDIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNTPSTRSFQTMCTLFQDIYLLHYDGAVNELKYAPSEVEEVKLVPVGE 387
+ D GMWD+SVGGH SAG TS+E AV+E EE+GI + LTF+ + + FQD+YL+ D V++L EV+EV+ + + E
Sbjct: 53 KKDRGGGMWDISVGGHISAGQTSIEAAVREVSEEIGITIEPSELTFLFGTSTDAELSNRKNQAKHFQDVYLVKKDLDVSKLVLQKEEVDEVRYISIEE 150
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: UPI000248F8F3 (NUDIX domain-containing protein n=1 Tax=Aquimarina agarivorans TaxID=980584 RepID=UPI000248F8F3) HSP 1 Score: 75.1 bits (183), Expect = 3.010e-14 Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 100 DIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNTPSTRSFQTMC-TLFQDIYLLHYDGAVNELKYAPSEVEEVKLVPVGELE 393
D YP +WD+SV GH SAGDT AV+E EE+G++ ++ L F+ + S R T+ F +Y+L + +NELK EV VKL+ + +LE
Sbjct: 56 DTYPNLWDISVAGHLSAGDTPSTAAVREIQEEIGVKISEEKLFFLKTIRK--SNRISNTIIDNEFNHLYVLEFAVNINELKLQTEEVTAVKLIDINDLE 152
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: UPI001E3585F4 (NUDIX domain-containing protein n=1 Tax=Lacrimispora sp. NSJ-141 TaxID=2897778 RepID=UPI001E3585F4) HSP 1 Score: 72.0 bits (175), Expect = 5.020e-13 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 85 LDRRS---DIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNTPSTRSFQTMCTL---FQDIYLLHYDGAVNELKYAPSEVEEVK 369
L RRS D YPG+WDV+ GH SAGD LETAV+ET EELGI + L F+ L + S+ +Q + + F ++L+ D ++ + EVEEV+
Sbjct: 54 LQRRSEEKDSYPGLWDVAAAGHVSAGDGYLETAVRETKEELGISLESGELQFL-FCLKSESSWEYQGISYIDREFHYVFLVEKDAGLSGFRLQKEEVEEVR 153
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: A0A1F6EN17_9BACT (Nudix hydrolase domain-containing protein n=1 Tax=Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_50_24 TaxID=1798507 RepID=A0A1F6EN17_9BACT) HSP 1 Score: 70.5 bits (171), Expect = 1.710e-12 Identity = 38/105 (36.19%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 85 LDRRSD---IYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNTPSTRSFQTMCTL-FQDIYLLHYDGAVNELKYAPSEVEEVKLVPVGE 387
L +RS +P WD+SV GH S+G TS+E A +ET EE+G+ D++ ++ V + T FQD++L+H D ++ +L P EVEEV+ + + E
Sbjct: 48 LQKRSKNKIAHPSCWDISVAGHASSGQTSIEAAKRETEEEIGLTLLDEAYEYLFTVRRVREVINKGTYVNNEFQDVFLVHSDISIEDLVLPPDEVEEVRWLDISE 152
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Match: A0A4Q1ISZ4_9FLAO (NUDIX domain-containing protein n=1 Tax=Lutibacter sp. HS1-25 TaxID=2485000 RepID=A0A4Q1ISZ4_9FLAO) HSP 1 Score: 69.3 bits (168), Expect = 4.550e-12 Identity = 33/97 (34.02%), Postives = 52/97 (53.61%), Query Frame = 1
Query: 100 DIYPGMWDVSVGGHFSAGDTSLETAVKETGEELGIECDDQSLTFVSLVLNTPSTRSFQTMCTLFQDIYLLHYDGAVNELKYAPSEVEEVKLVPVGEL 390
D +PG+WD+SV GH SAG+ +++A++E EE+GI + L ++ T + IY+ + + LK EV EVKL+P+ EL
Sbjct: 55 DTFPGLWDISVAGHISAGELPIDSAIREVSEEVGISIQQKQLHYIG-TSTKKVTHKIDLIDNELHHIYICSINFNIETLKIQQEEVAEVKLIPLNEL 150 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1718.4423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1718.4423.1 >prot_H-elongata_contig1718.4423.1 ID=prot_H-elongata_contig1718.4423.1|Name=mRNA_H-elongata_contig1718.4423.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp MSQNKCCGLHSHVTGFHPRWPYPGLDRRSDIYPGMWDVSVGGHFSAGDTSback to top mRNA from alignment at H-elongata_contig1718:1953..2857- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1718.4423.1 ID=mRNA_H-elongata_contig1718.4423.1|Name=mRNA_H-elongata_contig1718.4423.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=905bp|location=Sequence derived from alignment at H-elongata_contig1718:1953..2857- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1718:1953..2857- >mRNA_H-elongata_contig1718.4423.1 ID=mRNA_H-elongata_contig1718.4423.1|Name=mRNA_H-elongata_contig1718.4423.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig1718:1953..2857- (Himanthalia elongata Himel1 dioecious)back to top |