mRNA_H-elongata_contig17092.4380.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: D7FR19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR19_ECTSI) HSP 1 Score: 282 bits (722), Expect = 3.390e-94 Identity = 135/208 (64.90%), Postives = 158/208 (75.96%), Query Frame = 1
Query: 85 LLTDMPCEKGLNFRFFDQRTNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYESGPVGKGE-------QFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSISAIVVPAPPNTFSHQKLCQRGFTPQ----------------------------ARAYDFHGSPFVRMCLFPT 603
+LTDMPCEKGLNFRFFDQRTN+QWFKGYWALARIIRRRVYCEEMGLT+ QEFT++DP+SRHVLIQMGDAP+GYGRWR+E+GP G+ Q+A+VDRLCVLKEYR RGFAK+CLERIV DV+ QT MK +++AIVVPAPPNTF+HQKL +RG+TPQ DFHG+P+VRMCLFP+
Sbjct: 1 MLTDMPCEKGLNFRFFDQRTNKQWFKGYWALARIIRRRVYCEEMGLTSQQEFTEMDPTSRHVLIQMGDAPLGYGRWRFETGPAGQXXXXXXXXLQYAMVDRLCVLKEYRQRGFAKSCLERIVHDVSTQTAQMKTAVAAIVVPAPPNTFAHQKLGERGWTPQDVEPTVQLRAEGKDRVGVQSTAISCVLQGDTVDFHGTPYVRMCLFPS 208
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: A0A835YLW0_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW0_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.150e-44 Identity = 78/171 (45.61%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 82 QLLTDMPCEKGLNFRFFDQRTNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYESGPVGKGEQFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSISAIVVPAPPNTFSHQKLCQRGFTPQARAYDFHGSPFVRMCL 594
+LL + GLNF+ FDQR F GYW + RI+RRRV+CEE+ EF + D + RH++IQ+GDAP+G RWR E A++DRLC+L YR RGFA+ +E +EDV+A + ++ + A+VV AP T KL RGF PQA A G P VRMCL
Sbjct: 26 RLLAEGFVSGGLNFKAFDQRVPPTVFNGYWIICRILRRRVFCEELQGVPEMEFDENDGTCRHIIIQVGDAPVGCLRWRIEPPQAAGAPAVALIDRLCILAAYRGRGFARKAMEHALEDVSAVAVEAQVGVGAVVVLAPSGTMLQAKLADRGFVPQAEAV-LKGIPAVRMCL 195
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: A0A7S2D796_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D796_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.740e-34 Identity = 76/210 (36.19%), Postives = 113/210 (53.81%), Query Frame = 1
Query: 1 MCVCGGVLRFQGEKCAVCGHKGKGKIYQLLTDMPCEKGLNFRFFDQRTNEQWFKGY-------W----ALARIIRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYESGPVGKGEQF--AVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSISAIVVPAPPNTFSHQKLCQRGFTPQAR-AYDFHGSPFVRM 588
MC F ++C +CGHKGKG ++L L+F+ FDQ ++E + Y W ALA I+RRRV+ +E+G+ EF + +P+SRHV+ MGDAP+ Y RWR ++ P G G AV+DRLCVL YR + A+ L +++D+ M ++I VPA + QKL GF ++ + G+P VR+
Sbjct: 5 MCTACNHAHFPDQRCPICGHKGKGNSFRLPKFKGSPTHLHFKAFDQHSHEAKWSEYQQEAISHWTALSALASIVRRRVFVQELGIQENLEFDEHEPNSRHVVGFMGDAPVAYARWRLDTAPDGSGSNHSVAVLDRLCVLGNYRTQNVARNMLNFVMQDIAQMPFPMPVTIVVTNVPATYDALL-QKLLGHGFAIMSQETFLERGAPHVRL 213
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: A0A4D9D8K0_9STRA (N-acetyltransferase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8K0_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.820e-29 Identity = 80/204 (39.22%), Postives = 102/204 (50.00%), Query Frame = 1
Query: 28 FQGEKCAVCGHKGKGKIYQLL--TDMPCEKGLNFRFFDQRTNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYE-----------SGPVGK-GEQFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSIS-----AIVVPAPPNTFSHQKLCQRGFTPQARAYDFHGSPFV 582
+ EKCAVCGH+GKGK Y L+ T P L+F+ FDQ Q FK WALARIIR RV+ EE G+ EF D S HVL +GDAP+ RWR E S +G AV+DRL VLK YR RGFA L+ + ED + L A+++P KL ++G + G+PF+
Sbjct: 61 YPSEKCAVCGHRGKGKTYLLVAKTTAPSCATLHFKSFDQTQEAQAFKSLWALARIIRSRVFVEEEGIAEELEFDVHDESCHHVLGFLGDAPVLCARWRVEHPNGWENRELLSTKMGSTAGPMAVIDRLAVLKPYRGRGFAAEVLKFLGEDAASVLQGTHLGKEVLRAIAVLIPVDLTPCLSDKLREQG------GFHVMGNPFM 258
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: F0YI42_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI42_AURAN) HSP 1 Score: 119 bits (299), Expect = 2.220e-29 Identity = 70/189 (37.04%), Postives = 100/189 (52.91%), Query Frame = 1
Query: 58 HKGKGKIYQLLTDM---------PCEKGLNFRFFDQRTNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYESGPVGKGEQFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSISAIVVPAPP-NTFSHQKLCQRGFTPQARAYDFHGSPFVRMCL 594
H K+ +L+ M P + L+FRFFD +E ++ ++RI+RRR + +E+G++A EF +LD SRH L GDAP+ Y RW + AVVDRLC L+ YR RG A+ C+E I +D++ M+LS+ +VV P N +KL Q F P H S +RMCL
Sbjct: 52 HSSTVKVLFILSSMREVDGTLRKPADVNLHFRFFDITMSESEYRNNIDISRILRRRAFVDELGVSADVEFDNLDAKSRHSLGFYGDAPVSYARWHIDGNA-------AVVDRLCTLRAYRYRGVARRCMENIAQDISHCASRMQLSLEGLVVLVPDTNDILQRKLIQASFIPLDGRLTGHLS-CIRMCL 232
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: A0A7S3ZQB5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQB5_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.420e-26 Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 1
Query: 58 HKGKGKIYQLLTDM---------PCEKGLNFRFFDQRTNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYESGPVGKGEQFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSISAIVVPAPP-NTFSHQKLCQRGFTPQARAYDFHGSPF--VRMCL 594
H K+ +L+ M P + L+F FFD E ++ ++RI+RRR Y +E+G++A EF + D SRHVL GDAP Y RWR + A++DR+C L YR RG A+ CL+ + DV +KL++ +V+ P ++ QKL + F + D P VRMCL
Sbjct: 52 HNSTVKVLFILSSMREIDGTLRKPADINLHFTFFDNTMEEPHYRNNIDISRILRRRAYVDELGVSAELEFDEFDGESRHVLGSYGDAPACYARWRVN-------DNAAIIDRVCTLHAYRYRGVARKCLQHVAHDVLCCASRLKLTLHGLVLLVPQQHSTIQQKLAEASFI----SLDGSVGPLSCVRMCL 231
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: A0A1V9Z3I7_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3I7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.610e-17 Identity = 51/173 (29.48%), Postives = 88/173 (50.87%), Query Frame = 1
Query: 40 KCAVCGHKGKGKIYQLLTDMPCEKGLNFRFFDQRTNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSS--RHVLIQMGDAPMGYGRWRYESGPVGKGEQFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSISAIV--VPAPPNTFSHQKLCQRGFTPQ 546
KC +CGH GK K+ QLL ++FR F + G W+ +R++R +++ G+ F +LD ++ +HVLI +GDAP+G RW + G + A++++L VL +R G L IV+D+ + + + AIV +P P++ + + F P+
Sbjct: 16 KCPICGHIGKCKVMQLLEKNTPINQVSFRSFRVDVHASPILGNWSFSRLLREKIFAAPTGMFDAPLFDNLDVTNACKHVLIFVGDAPVGSARWSFT---YDNGVEVALIEKLGVLDTHRRAGHGAKMLAFIVQDIATTSRDVGRDVFAIVANIPNDPSSAPWKTFVKCKFEPK 185
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: A0A067CC32_SAPPC (N-acetyltransferase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CC32_SAPPC) HSP 1 Score: 79.7 bits (195), Expect = 5.890e-15 Identity = 43/153 (28.10%), Postives = 77/153 (50.33%), Query Frame = 1
Query: 31 QGEKCAVCGHKGKGKIYQLLTDMPCEKGLNFRFFDQRTNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSS--RHVLIQMGDAPMGYGRWRYESGPVGKGEQFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLTMKLSISAIV 483
QG KC +CGH GK K+ LL ++ R F + G W+ +R++R +++ + F +LD ++ +H+LI +GDAP+G RW + G + A++++ +L +R G LE I++D+ + + + AIV
Sbjct: 15 QGVKCPICGHIGKCKVLMLLKKNAPINQVSLRAFRIDVHASPILGDWSFSRLLREQIFALPTAMFGAPLFDNLDVTNACKHILIFVGDAPVGTARWSFT---YDNGVEVALIEKFGLLDTHRRLGHGTKMLEYIIQDIATTSAEVGRDVFAIV 164
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: C6CWC1_PAESJ (GCN5-related N-acetyltransferase n=5 Tax=Paenibacillus TaxID=44249 RepID=C6CWC1_PAESJ) HSP 1 Score: 56.6 bits (135), Expect = 7.610e-7 Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 1
Query: 142 TNEQWFKGYWALARIIRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYESGPVGKGEQFAVVDRLCVLKEYRLRGFAKACLE 420
TNEQ + + IR++V+ +E G+ A E+ + + SS+HVL+ D P+ GR R G A + R+CVL +R G +A +E
Sbjct: 9 TNEQDLQAVYD----IRKKVFVDEQGVPAENEYDEFEESSKHVLVHYNDEPVAAGRVRVVDG-------VAKLQRICVLASHRKYGLGRAVVE 90
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Match: A0A0L1LP58_PRIMG (N-acetyltransferase domain-containing protein n=49 Tax=Bacillaceae TaxID=186817 RepID=A0A0L1LP58_PRIMG) HSP 1 Score: 56.2 bits (134), Expect = 1.060e-6 Identity = 28/90 (31.11%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 187 IRRRVYCEEMGLTAPQEFTDLDPSSRHVLIQMGDAPMGYGRWRYESGPVGKGEQFAVVDRLCVLKEYRLRGFAKACLERIVEDVTAQTLT 456
IR+ V+ EE G+ EF + + +++H+LI + P GR+R + +A ++R+CVLKE+R G K + + E + LT
Sbjct: 18 IRKTVFVEEQGVPLKDEFDEHEETAKHILIYYNNKPAASGRFRIV-------DDYAKIERICVLKEFRKYGLGKEVVTSLEEAAKKEGLT 100 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17092.4380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17092.4380.1 >prot_H-elongata_contig17092.4380.1 ID=prot_H-elongata_contig17092.4380.1|Name=mRNA_H-elongata_contig17092.4380.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp MCVCGGVLRFQGEKCAVCGHKGKGKIYQLLTDMPCEKGLNFRFFDQRTNEback to top mRNA from alignment at H-elongata_contig17092:1074..3871+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17092.4380.1 ID=mRNA_H-elongata_contig17092.4380.1|Name=mRNA_H-elongata_contig17092.4380.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2798bp|location=Sequence derived from alignment at H-elongata_contig17092:1074..3871+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17092:1074..3871+ >mRNA_H-elongata_contig17092.4380.1 ID=mRNA_H-elongata_contig17092.4380.1|Name=mRNA_H-elongata_contig17092.4380.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at H-elongata_contig17092:1074..3871+ (Himanthalia elongata Himel1 dioecious)back to top |