mRNA_H-elongata_contig17074.4372.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig17074.4372.1
Unique NamemRNA_H-elongata_contig17074.4372.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: D7G426_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G426_ECTSI)

HSP 1 Score: 862 bits (2226), Expect = 3.470e-307
Identity = 426/542 (78.60%), Postives = 476/542 (87.82%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPVPMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYLLGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIKLDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVLH 1626
            REDEWGGSYENR+RFPVS+VEGIR+ACGDDFIIIYRLSMLDLIE+GSSW EIV LAK IEKAGASIINTGIGWHEAR+PTIATSVPRAGFSWVTK LKG+V +PLI TNRINMP TAE+VLA+GHADMISMAR PFLADPFWVRKAAEGR DEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNL PV  +K KR+AVVGSGPAGLAAAT CAERGH+VTLFEGA+ +GGQFNMAKL+PGKEEFYETLRYF R+I++TGVD+RLNSKVDA S+LA+DP FDA ILATGVLPR ++FEG+DHPK         VLSYVDVLR +A VGR+VAVIGAGGIGFDV+EYLLGE+AL+TP E+R+ D+  FLKEW+IDR+LS+RGGL       NS  N     REIWLCQRKK  LGKGLGKTTGWIHR SLK  GV+M+ +VSY+KVDD+GLHIK+DGEP +L VD+V+VCAGQEPL DL+ PL+ AGMPVFLIGGAE+A ELDAKRAIDQGTRLAAV+EDA  G VYNAPESLK K ++
Sbjct:  184 REDEWGGSYENRMRFPVSVVEGIREACGDDFIIIYRLSMLDLIEKGSSWEEIVELAKNIEKAGASIINTGIGWHEARVPTIATSVPRAGFSWVTKKLKGQVSVPLITTNRINMPDTAEKVLAEGHADMISMAR-PFLADPFWVRKAAEGRVDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLLPVNREKVKRVAVVGSGPAGLAAATGCAERGHNVTLFEGASQLGGQFNMAKLVPGKEEFYETLRYFKRKIDLTGVDIRLNSKVDAPSLLASDPGFDAVILATGVLPRTLNFEGSDHPK---------VLSYVDVLRHKAEVGRRVAVIGAGGIGFDVSEYLLGEKALQTPAEERLQDVPSFLKEWKIDRNLSNRGGLADGTSGDNSGHNG----REIWLCQRKKAPLGKGLGKTTGWIHRTSLKKHGVHMLGSVSYDKVDDEGLHIKVDGEPMVLPVDNVIVCAGQEPLKDLEDPLKEAGMPVFLIGGAEKAAELDAKRAIDQGTRLAAVVEDAHSGDVYNAPESLKAKGMN 711          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: A0A835Z979_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z979_9STRA)

HSP 1 Score: 689 bits (1779), Expect = 3.720e-239
Identity = 357/552 (64.67%), Postives = 427/552 (77.36%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVL-IPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPVPMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGA-DHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYLLGEQALK-TPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIKLD-GEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKV---LHAFT 1635
            R+DEWGG ++ R+RFPV IV  IR+A G DFIIIYRLSMLDLIE GSSW E+V LAK ++KAGASI+NTGIGWHEARIPTIAT VPRAGF+WVT+ LK E L  PLI TNRINMP TAE+VLA G ADM+SMAR P LADP+WVRKAAEGREDEINTCI CNQACLDH+F GK ASCLVNPRAG+ET L L PV   KR+R+AVVG+GPAGLA ATS A+RGH VTLFE A+ IGGQFNMAK +PGKEEF+ET+RYF R++E+TGV++ LN +V A  +++    ++  +LATGV+PR++ F G+ DH           VLSYVDVLR +A+VG++VA+IGAGGIGFDV EYLL E+ ++    E+R+ DI  FL+EW ID ++S RGGL             E  +REI+LCQRK G LGKGLGKTTGWIHR SLK  GV+M++ V Y +VDD GLH+  + GE R+L VD+V++CAGQEPL DLQ PL  AG+PVF IGG+E A ELDAKRAIDQGTRLAAVIEDA+ G V+NAP   K +    L AFT
Sbjct:  192 RQDEWGGEFQQRVRFPVEIVRRIREAVGQDFIIIYRLSMLDLIEGGSSWEEVVELAKNVDKAGASILNTGIGWHEARIPTIATCVPRAGFTWVTRKLKQEGLRTPLITTNRINMPQTAEQVLARGDADMVSMAR-PLLADPYWVRKAAEGREDEINTCIACNQACLDHSFVGKLASCLVNPRAGHETELRLLPVAATKRRRVAVVGAGPAGLACATSAAQRGHKVTLFESASDIGGQFNMAKAVPGKEEFHETIRYFKRQLELTGVEVVLNKRVSADDLISGG--YEQVVLATGVVPRQVDFPGSRDHRS---------VLSYVDVLRHKAHVGKRVAIIGAGGIGFDVAEYLLQEKKVQGMTVEQRLGDIPGFLREWGIDPNMSSRGGLAPAV--------SEPAEREIYLCQRKPGALGKGLGKTTGWIHRASLKKHGVHMISGVKYRRVDDAGLHVTFESGEERVLAVDNVIICAGQEPLRDLQEPLGAAGIPVFRIGGSELAAELDAKRAIDQGTRLAAVIEDAQAGQVFNAPLGFKAQAMDTLKAFT 723          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: W7U1Q4_9STRA (Dienoyl-reductase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1Q4_9STRA)

HSP 1 Score: 665 bits (1716), Expect = 8.380e-230
Identity = 344/545 (63.12%), Postives = 414/545 (75.96%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLK--GEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPVPMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYLLGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIKL--DGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVL 1623
            R   WGG YENR+RFPV IV+ +R A G+DFIII+RLSMLDLI  GS+W E+V LA+ +E AGA+IINTGIGWHEARIPTIAT VPRAG++WVTK LK  G + +PL  TNRINMP TAERVLADG+AD++SMAR PFLADP  + KAAEGR +EINTCI CNQACLDHTFKG++ASCLVNPRAGYET L+L PV    + R+AVVG+GPAGLA AT+ AERGH+VTLFE A  IGGQFNMAK+IPGKEEF+ET+RYFS R+++  VD+RLNS   A  + A    FD  ++ATGVLPR +   G +HPK         VLSYVDVLRG   VG++VA+IGAGGIGFDV EYLL + +L  PP    +++  FLKEW+ID D   RGGL++ +    +F       REI+L QRKKG +G GLGKTTGWIHR+SLK  GV+M+  V Y K+DD+GLH+KL   GE ++L VD +V CAGQEPL +LQ PL  AG+ VF IGGAE A ELDAKRAIDQGTRLAA +E AK G V++AP S + KV+
Sbjct:  188 RTGAWGGPYENRMRFPVEIVKAVRAAVGEDFIIIFRLSMLDLIPAGSAWEEVVTLAQALEAAGATIINTGIGWHEARIPTIATCVPRAGYAWVTKKLKETGVLGVPLCTTNRINMPATAERVLADGNADLVSMAR-PFLADPAILSKAAEGRVEEINTCIACNQACLDHTFKGQRASCLVNPRAGYETELHLLPVSPGSKMRVAVVGAGPAGLACATAAAERGHAVTLFEKADEIGGQFNMAKVIPGKEEFHETIRYFSHRLKLLQVDVRLNSPATAEDLAA--EGFDRVVMATGVLPRPVKIPGCEHPK---------VLSYVDVLRGRKEVGKRVAIIGAGGIGFDVAEYLLHDPSL--PPAS--VNVGKFLKEWRIDGDNKERGGLLEKEAHDPAF-------REIYLLQRKKGKMGGGLGKTTGWIHRVSLKKGGVHMVTGVEYLKIDDEGLHLKLKSSGETKVLNVDTIVTCAGQEPLRELQAPLTAAGLGVFRIGGAEMAAELDAKRAIDQGTRLAACLEKAKPGEVFSAPVSWEAKVM 709          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: A0A7S1TQY4_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQY4_9STRA)

HSP 1 Score: 638 bits (1646), Expect = 4.040e-219
Identity = 341/545 (62.57%), Postives = 395/545 (72.48%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPV--PMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRIS--FEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYLLGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIKLDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVL 1623
            R DEWGGSYENR+RFP  IV+ +R A GDDFIIIYRLSMLDL+E GSSW EIV LAK IE AGASIINTGIGWHEARIPTIATSVPR GF+WVTK LKGEV IPL  TNRIN P  AERVL DG ADMISMAR PFLADP +V KA  GRE +INTCIGCNQACLDHTFKGK+ASCLVNP AGYE  L ++P   P  KRK +AV+G+GPAG+A++T+ AERGH V LFE +  IGGQFNMAK IPGKEEFYET+RYF RRIE TGV+LRLN+  D  ++ A    FDA ILATGV PR +     G+D P  +         SYVDVL   A VG+ V VIGAGGIGFDV+E+L  + + + P     +D++ F+KEW +D     RGGL     +     N E + R I L QRKKG LG GLGKTTGWIHR  LK   V M   V Y  V+D+GL I+++G+ +++E D +VVCAGQ P  DL+ PL  AG  VF +GG+EEA ELDAKRAIDQGTRLAA IEDA  G V+NAPE   EK +
Sbjct:  192 RTDEWGGSYENRMRFPTEIVKRVRAAAGDDFIIIYRLSMLDLVEGGSSWPEIVQLAKNIESAGASIINTGIGWHEARIPTIATSVPRGGFAWVTKKLKGEVGIPLCTTNRINDPAVAERVLEDGCADMISMAR-PFLADPHFVAKAETGRELDINTCIGCNQACLDHTFKGKRASCLVNPIAGYELELKIEPTTDPSQKRK-VAVIGAGPAGMASSTTAAERGHDVVLFEASGEIGGQFNMAKKIPGKEEFYETMRYFGRRIEQTGVELRLNTVADVETLQA--EGFDAVILATGVKPRTLKDVLPGSDKPHFV---------SYVDVLANNAEVGKNVVVIGAGGIGFDVSEFLAHDPSHEAPS----VDVARFMKEWGVDMTNEARGGLAPEGAQ-----NPEPY-RNITLLQRKKGKLGAGLGKTTGWIHRQQLKKANVEMKGNVKYVAVEDEGLRIEINGKEQVIEADTIVVCAGQTPNRDLEKPLIDAGFTVFKVGGSEEASELDAKRAIDQGTRLAAQIEDATTGDVFNAPEGSFEKAM 713          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: A0A7R9U6D8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6D8_9STRA)

HSP 1 Score: 630 bits (1626), Expect = 4.750e-217
Identity = 347/549 (63.21%), Postives = 393/549 (71.58%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPV--PMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPR--RISFEGA-DHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYLLGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERH---QREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIKLDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVL 1623
            R DEWGGSYENR+RFP  IV  +RQA GDDFII+YRLSMLDL+E GS W EIV LAK +E AGA IINTGIGWHEARIPTIAT VPR GF+WVTK LKGEV IPL  TNRIN P  AE++L D  ADMISMAR PFLADP++V+KA EGRE +INTCIGCNQACLDHTFKGK+ASCLVNP A YE+   + P+  P DKR RIAV+G+GPAGLAA+T+ AERGH V LFE +  IGGQFNMAK IPGKEEFYETLRYF+RRIE TGVDLRLN++ D A++ +   AFDA ILATGV PR  R S  GA D P           LSYVDVL   A VG+ V VIGAGGIGFDV E L+  +     P   V D+  FLKEW +D     RGGL          PN        R+I L QRK G LG GLGKTTGWIHR  LK +GVNMM  V Y  V+  GL I++ GE R L+ D +VVCAGQ P  +L+ PL  AG  VF IGGAE+A ELDAKRAIDQGTRLAA IE A  G V+NAP  L E+++
Sbjct:  126 RTDEWGGSYENRMRFPTEIVRRVRQAVGDDFIIMYRLSMLDLVEGGSVWPEIVQLAKAVEGAGADIINTGIGWHEARIPTIATCVPRGGFAWVTKKLKGEVGIPLCTTNRINDPTVAEQILNDDCADMISMAR-PFLADPYFVKKAMEGRELDINTCIGCNQACLDHTFKGKRASCLVNPLACYESEFRITPIAGPSDKR-RIAVIGAGPAGLAASTTAAERGHDVVLFEASGEIGGQFNMAKTIPGKEEFYETLRYFNRRIEQTGVDLRLNTRADVATMKS--EAFDAVILATGVEPRTLRDSLPGAADSPI---------FLSYVDVLAKNAPVGKNVVVIGAGGIGFDVCERLVHNEE---HPASSV-DVDTFLKEWGVDGSNEGRGGLA---------PNGAEELEPARQITLLQRKSGKLGAGLGKTTGWIHRQQLKKKGVNMMGGVKYLSVEPDGLRIEVKGEERTLKCDTIVVCAGQSPKRELEKPLAEAGFDVFKIGGAEKAAELDAKRAIDQGTRLAAQIEHATTGQVFNAPVGLTERLM 648          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: W2QJP5_PHYPN (Uncharacterized protein n=47 Tax=Peronosporaceae TaxID=4777 RepID=W2QJP5_PHYPN)

HSP 1 Score: 631 bits (1628), Expect = 8.870e-217
Identity = 334/564 (59.22%), Postives = 407/564 (72.16%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKP--------VPMDKR------------KRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYL--LGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIK-LDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVL 1623
            R+D+WGGSYENRIRFPV IV+ +R A G+DFIII+RLSMLDL+E+GS+W EIV LAK+IE AGA+IINTGIGWHEARIPTIATSVPR GFSWVT+ +KGEV IPLI TNRINMP  AE+++A+G ADM+SMAR PFLADP +VRK  EGR DEINTCIGCNQACLDHTFKG  ASCLVNPR+GYET LN  P        V  D +            +R+AV+G+GPAGL+ +T+ A RGH VTLF+ A  IGGQFNMAK IPGKEEFYETLRYF +++++ GV+++L   V+AA +     AFD  ++ATGVLPR +   GADHPK         VLSY+DVL+ +A VG+KVA+IGAGGIGFDV E+L  +GE    +        +  F +EW ID   S RGG+  +K      P+     REI+L QRK    GK LGKTTGWIHR+SLK++ V M+  VSY+KVDD+GLH     G+  +L+VD+V++CAGQ PL +L+ PLQ  G+ VF IGGA+EA ELDAKRAIDQG RLAA IE AK G    A  +L  KV 
Sbjct:  152 RKDQWGGSYENRIRFPVEIVKAVRAAVGEDFIIIFRLSMLDLVEKGSTWDEIVMLAKQIEAAGATIINTGIGWHEARIPTIATSVPRGGFSWVTQKMKGEVSIPLITTNRINMPDVAEQIIAEGRADMVSMAR-PFLADPEFVRKTEEGRVDEINTCIGCNQACLDHTFKGITASCLVNPRSGYETLLNYTPTNGELLCGVSSDLQCDNSCCLLDTDAQRVAVIGAGPAGLSFSTAAALRGHEVTLFDQADAIGGQFNMAKTIPGKEEFYETLRYFEKQLKLKGVNVKLGQHVEAADLTTG--AFDKVVIATGVLPRTLKIPGADHPK---------VLSYIDVLKHKAPVGKKVAIIGAGGIGFDVAEFLSHVGESTSSS--------VDVFAREWGIDTTNSVRGGVAGIK------PSIPPQAREIYLMQRKSTKHGKDLGKTTGWIHRLSLKHRDVKMIGGVSYDKVDDEGLHYTDKKGKKHVLDVDNVIICAGQVPLRELEKPLQEQGVTVFRIGGADEAGELDAKRAIDQGARLAATIETAKPGDALGAEATLSAKVF 689          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: A0A0P1AI02_PLAHL (-dienoyl-reductase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AI02_PLAHL)

HSP 1 Score: 628 bits (1619), Expect = 2.400e-215
Identity = 326/544 (59.93%), Postives = 403/544 (74.08%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPVPMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYL--LGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIK-LDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVL 1623
            R D+WGGSYENRIRFP+ I++ +R A G DFIII+RLSMLDLIE+GS+W EIV LAK+IE AGA+IINTGIGWHEARIPTIATSVPR GFSWVT+ + GEV IPLI TNRINMP  AE+++A+G ADM+SMAR PFLADP +VRK  EGR DEINTCIGCNQACLDHTFKG  ASCLVNPR+GYET+LN    P    +R+AVVG+GPAGL+ + + A RGH VTLF+ A  IGGQFNMAK+IPGKEEF+ETLRYF +++++ GV+++   +VDAA + A D  FD  ++A+GVLPR +   GADHP          VLSY+DVL+ ++ VG++VA+IGAGGIGFDV E+L  +GE    +        +  F +EW ID   S RGG+  +K   +S P      REI+L QRK    GK LGKTTGWIHR+SLK++ V M+  VSY+KVDD GLH     G+ ++L+VD+V+VCAGQ PL +L++PLQ  G+PV+ IGGA+EA ELDAKRAIDQG RLAA IE AK G        L  K+ 
Sbjct:  180 RRDQWGGSYENRIRFPIEIIKAVRAAVGKDFIIIFRLSMLDLIEKGSTWDEIVMLAKQIEAAGATIINTGIGWHEARIPTIATSVPRGGFSWVTQKMMGEVSIPLITTNRINMPDVAEKIIAEGRADMVSMAR-PFLADPDFVRKTEEGRVDEINTCIGCNQACLDHTFKGITASCLVNPRSGYETSLNY--FPTTDVQRVAVVGAGPAGLSFSATAALRGHEVTLFDEADVIGGQFNMAKIIPGKEEFHETLRYFQKQLKLNGVNVKHGRRVDAADLTAGD--FDKVVMASGVLPRPLKIPGADHPM---------VLSYMDVLKKKSKVGQRVAIIGAGGIGFDVAEFLTHVGESTSSS--------VEVFAREWGIDTTNSVRGGVAGIK---SSVPPPA---REIYLMQRKSTKHGKDLGKTTGWIHRLSLKHRNVKMIGGVSYDKVDDAGLHYTDKSGKKQILDVDNVIVCAGQVPLRELEMPLQEKGIPVYRIGGADEAGELDAKRAIDQGARLAATIETAKPGDALEVQPPLSAKIF 695          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: K3XB01_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB01_GLOUD)

HSP 1 Score: 627 bits (1618), Expect = 3.520e-215
Identity = 333/544 (61.21%), Postives = 399/544 (73.35%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPVPMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYL--LGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIK-LDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVL 1623
            R DEWGG Y NRIRFPV +V+  RQA G DFIII+RLSMLDLIE+GS+W EIV LAK IE AGA+IINTGIGWHEARIPTIATSVPR GFSWVTK + GEV IPLI TNRIN P    +++ADGHADM+SMAR PFLADP +V KA EGREDEINTCIGCNQACLDHTFKG  ASCLVNPR+GYET   LK  P +  +RIAVVG+GPAGL+ +TS A RGH VTLF+ A  IGGQFNMAK+IPGKEEFYETLRYF +++++TGV+++L  +V A  + A    FD  ++ATGVLPR +   G DH          KVLSY+DVL+ +A VG++VAVIGAGGIGFDV+E+L  +G+ A         +D++ F KEW ID   S RGG+  VK      P  E   RE++L QRK    GK LGKTTGWIHR+SLK++ V M+  V+Y+KVDD GLH    +G+  +L VD+VVVCAGQ PL +L+ PL+  G+ VF IGGA+EA ELDAKRAIDQG RLAA IE A  G    A  +L  ++ 
Sbjct:  180 RTDEWGGPYANRIRFPVEVVKAARQAVGKDFIIIFRLSMLDLIEKGSTWEEIVQLAKEIENAGATIINTGIGWHEARIPTIATSVPRGGFSWVTKKMMGEVNIPLITTNRINAPEVGNQIIADGHADMVSMAR-PFLADPEFVLKAKEGREDEINTCIGCNQACLDHTFKGITASCLVNPRSGYET--ELKFTPTENVQRIAVVGAGPAGLSFSTSAATRGHEVTLFDQADAIGGQFNMAKVIPGKEEFYETLRYFEKKLKLTGVNVKLGQRVSAEDLAAGG--FDKVVIATGVLPRDLKIPGGDH---------SKVLSYIDVLKHKAPVGKRVAVIGAGGIGFDVSEFLTHIGKSAS--------LDVNLFAKEWGIDTSNSVRGGVQGVK---QEVPAPE---REVYLMQRKSTKHGKDLGKTTGWIHRLSLKHRDVKMIGGVNYDKVDDAGLHYTDKEGKKHVLGVDNVVVCAGQIPLRELEEPLKKKGVTVFRIGGADEAGELDAKRAIDQGARLAAKIETATPGEPLGAKPTLSTQIF 695          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: M4B9V5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B9V5_HYAAE)

HSP 1 Score: 627 bits (1617), Expect = 4.660e-215
Identity = 327/542 (60.33%), Postives = 403/542 (74.35%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPVPMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYLLGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIK-LDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVL 1623
            R+DEWGGSYE+RIRFP+ IV+ +R A G+DFI+I+RLSMLDL+ERGS+W EIV LAK+IE AGA+IINTGIGWHEARIPTIATSVPR GFSWVT+ +KGEV IPLI TNRINMP  AE+++A+G A  +SMAR PFLADP + RK  E R DEINTCIGCNQACLDHTFKG  ASCLVNPR+GYET LN  P   +  +R+AVVGSGPAGL+ +T+ A RGH VTLF+ A  IGGQFNMAK++PGKEEFYETLRYF +++++ GV+++L  +V+AA +++   AFD  ++ATGV+PR ++  GADHPK         VLSY+DVL+ EA VG+KVA+IGAGGIGFDV E+L  E       E     I  F +EW ID   + RGG+  ++      P+     RE++L QRK    GK LGKTTGWIHR+SLK++ V M+  VSY+KVDD GLH    +G+ ++L+VD+VVVC GQ PL +L+ PLQ  G+ VF IGGA+EA ELDAKRAIDQG RLAA IE AK G    A   L  KV 
Sbjct:  180 RKDEWGGSYEHRIRFPIEIVKAVRAAVGNDFILIFRLSMLDLVERGSTWDEIVMLAKQIEAAGATIINTGIGWHEARIPTIATSVPRGGFSWVTQKMKGEVSIPLITTNRINMPDVAEQIIAEGRA--VSMAR-PFLADPEFARKTEEDRVDEINTCIGCNQACLDHTFKGITASCLVNPRSGYETLLNYTPT--NNVQRVAVVGSGPAGLSFSTTAALRGHEVTLFDQADAIGGQFNMAKIVPGKEEFYETLRYFEKQLKLRGVNVKLGHRVEAAELMSG--AFDKVVIATGVVPRSLTIPGADHPK---------VLSYIDVLKNEAPVGQKVAIIGAGGIGFDVAEFLTHEG------ESSSSSIDAFAREWGIDTSNTVRGGVAGIQ------PSILPPSREVYLIQRKSTKHGKDLGKTTGWIHRLSLKHRNVKMIGGVSYDKVDDAGLHYTDKNGKKKVLDVDNVVVCVGQVPLRELEKPLQEKGIIVFRIGGADEAGELDAKRAIDQGARLAATIETAKPGDPLEATPPLSAKVF 693          
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Match: A0A847SH21_9NEIS (NADPH-dependent 2,4-dienoyl-CoA reductase n=1 Tax=Leeia aquatica TaxID=2725557 RepID=A0A847SH21_9NEIS)

HSP 1 Score: 625 bits (1613), Expect = 7.550e-215
Identity = 321/519 (61.85%), Postives = 390/519 (75.14%), Query Frame = 1
Query:    1 REDEWGGSYENRIRFPVSIVEGIRQACGDDFIIIYRLSMLDLIERGSSWREIVALAKRIEKAGASIINTGIGWHEARIPTIATSVPRAGFSWVTKNLKGEVLIPLIATNRINMPHTAERVLADGHADMISMAR*PFLADPFWVRKAAEGREDEINTCIGCNQACLDHTFKGKQASCLVNPRAGYETTLNLKPVPMDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIPGKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGVLPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIGFDVTEYLLGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRSNSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAVSYEKVDDQGLHIKLDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVFLIGGAEEAKELDAKRAIDQGTRLAA 1557
            R D+WGGS+ENRIRFP+ I+  +R A G DFIIIYRLSMLDL+++GS+W EIVALA+ +E+AGA++INTGIGWHEARIPTIAT VPR GF+WVT+ LKG V IPL+ TNRIN P  AE++L++G ADM+SMAR PFLADP +VRKAAE R DEINTCIGCNQACLDH F+ K  SCLVNPRA +ET LN   +P  + KRIAVVG+GPAGLA AT  A+RGH VTLFE ++ IGGQFN+AK +PGKEEFYETLRYF  ++    V++RL  +  A  +L     FD  +LATG+LPR+ISF G+DHPK         VLSY+DVLR +  VG +VA+IGAGGIGFD  EYL  E    TP     +D+  FL+EW ID +LSHRGGL      ++  P      R+I+L QRK   +G GLGKTTGWIHR SLKN+GV M++ V Y+KVDD+GLHI ++G+P+LL VDHVV+CAGQEP   L   L  +G PV LIGGA+ A ELDAKRAIDQG+RLAA
Sbjct:  182 RTDQWGGSFENRIRFPLEILRRVRAAVGSDFIIIYRLSMLDLVDQGSNWDEIVALAQAVEQAGATLINTGIGWHEARIPTIATMVPRGGFAWVTRKLKGSVRIPLVTTNRINTPEVAEQILSEGSADMVSMAR-PFLADPEFVRKAAEQRADEINTCIGCNQACLDHIFQAKMTSCLVNPRACHETELNY--LPTAQPKRIAVVGAGPAGLACATVAAQRGHQVTLFEASSEIGGQFNVAKQVPGKEEFYETLRYFRTQLARHQVEVRLGQRASAEQLLD----FDEVVLATGILPRQISFPGSDHPK---------VLSYLDVLRDKQPVGERVAIIGAGGIGFDTAEYLSHEG---TPTS---LDLPAFLQEWGIDGELSHRGGLRAGGPAASHSP------RQIYLLQRKSSKVGDGLGKTTGWIHRTSLKNKGVQMLSGVQYDKVDDEGLHITVNGQPQLLPVDHVVICAGQEPQRALHAALAASGKPVHLIGGADVAAELDAKRAIDQGSRLAA 672          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17074.4372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G426_ECTSI3.470e-30778.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z979_9STRA3.720e-23964.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U1Q4_9STRA8.380e-23063.12Dienoyl-reductase n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A7S1TQY4_9STRA4.040e-21962.57Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U6D8_9STRA4.750e-21763.21Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
W2QJP5_PHYPN8.870e-21759.22Uncharacterized protein n=47 Tax=Peronosporaceae T... [more]
A0A0P1AI02_PLAHL2.400e-21559.93-dienoyl-reductase n=1 Tax=Plasmopara halstedii Ta... [more]
K3XB01_GLOUD3.520e-21561.21Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
M4B9V5_HYAAE4.660e-21560.33Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A847SH21_9NEIS7.550e-21561.85NADPH-dependent 2,4-dienoyl-CoA reductase n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17074contigH-elongata_contig17074:2..6893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score507.7
Seed ortholog evalue4.4e-141
Seed eggNOG ortholog2880.D7G426
KEGG koko:K00219
EggNOG free text desc.NADPH-adrenodoxin reductase activity
EggNOG OGsCOG0493@1,COG1902@1,KOG0134@2759,KOG1800@2759
EC1.3.1.34
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNADH:flavin oxidoreductase/NADH oxidase, N-terminal
Ec32 orthologEc-19_000340.1
Exons12
Model size2040
Cds size1062
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17074.4372.1prot_H-elongata_contig17074.4372.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig17074 398..4522 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929994.3736043-UTR-H-elongata_contig17074:1..3971622929994.3736043-UTR-H-elongata_contig17074:1..397Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 2..397 -
1691679238.6780376-UTR-H-elongata_contig17074:1..3971691679238.6780376-UTR-H-elongata_contig17074:1..397Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 2..397 -
1622929994.5552988-UTR-H-elongata_contig17074:4522..45881622929994.5552988-UTR-H-elongata_contig17074:4522..4588Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 4523..4588 -
1691679238.7609646-UTR-H-elongata_contig17074:4522..45881691679238.7609646-UTR-H-elongata_contig17074:4522..4588Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 4523..4588 -
1622929994.569469-UTR-H-elongata_contig17074:5009..51241622929994.569469-UTR-H-elongata_contig17074:5009..5124Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 5010..5124 -
1691679238.7694693-UTR-H-elongata_contig17074:5009..51241691679238.7694693-UTR-H-elongata_contig17074:5009..5124Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 5010..5124 -
1622929994.583312-UTR-H-elongata_contig17074:5375..54761622929994.583312-UTR-H-elongata_contig17074:5375..5476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 5376..5476 -
1691679238.777982-UTR-H-elongata_contig17074:5375..54761691679238.777982-UTR-H-elongata_contig17074:5375..5476Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 5376..5476 -
1622929994.5965874-UTR-H-elongata_contig17074:5746..59001622929994.5965874-UTR-H-elongata_contig17074:5746..5900Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 5747..5900 -
1691679238.7862341-UTR-H-elongata_contig17074:5746..59001691679238.7862341-UTR-H-elongata_contig17074:5746..5900Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 5747..5900 -
1622929994.6145132-UTR-H-elongata_contig17074:6747..68931622929994.6145132-UTR-H-elongata_contig17074:6747..6893Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 6748..6893 -
1691679238.806621-UTR-H-elongata_contig17074:6747..68931691679238.806621-UTR-H-elongata_contig17074:6747..6893Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig17074 6748..6893 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929994.3915775-CDS-H-elongata_contig17074:397..4241622929994.3915775-CDS-H-elongata_contig17074:397..424Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 398..424 -
1691679238.6880033-CDS-H-elongata_contig17074:397..4241691679238.6880033-CDS-H-elongata_contig17074:397..424Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 398..424 -
1622929994.4083996-CDS-H-elongata_contig17074:919..10871622929994.4083996-CDS-H-elongata_contig17074:919..1087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 920..1087 -
1691679238.6979995-CDS-H-elongata_contig17074:919..10871691679238.6979995-CDS-H-elongata_contig17074:919..1087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 920..1087 -
1622929994.4236593-CDS-H-elongata_contig17074:1399..15391622929994.4236593-CDS-H-elongata_contig17074:1399..1539Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 1400..1539 -
1691679238.7088895-CDS-H-elongata_contig17074:1399..15391691679238.7088895-CDS-H-elongata_contig17074:1399..1539Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 1400..1539 -
1622929994.4383113-CDS-H-elongata_contig17074:1972..20551622929994.4383113-CDS-H-elongata_contig17074:1972..2055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 1973..2055 -
1691679238.717741-CDS-H-elongata_contig17074:1972..20551691679238.717741-CDS-H-elongata_contig17074:1972..2055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 1973..2055 -
1622929994.4552488-CDS-H-elongata_contig17074:2446..25531622929994.4552488-CDS-H-elongata_contig17074:2446..2553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 2447..2553 -
1691679238.7263465-CDS-H-elongata_contig17074:2446..25531691679238.7263465-CDS-H-elongata_contig17074:2446..2553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 2447..2553 -
1622929994.4738166-CDS-H-elongata_contig17074:2799..29701622929994.4738166-CDS-H-elongata_contig17074:2799..2970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 2800..2970 -
1691679238.734075-CDS-H-elongata_contig17074:2799..29701691679238.734075-CDS-H-elongata_contig17074:2799..2970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 2800..2970 -
1622929994.4914842-CDS-H-elongata_contig17074:3856..40961622929994.4914842-CDS-H-elongata_contig17074:3856..4096Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 3857..4096 -
1691679238.74453-CDS-H-elongata_contig17074:3856..40961691679238.74453-CDS-H-elongata_contig17074:3856..4096Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 3857..4096 -
1622929994.5142293-CDS-H-elongata_contig17074:4396..45221622929994.5142293-CDS-H-elongata_contig17074:4396..4522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 4397..4522 -
1691679238.7527995-CDS-H-elongata_contig17074:4396..45221691679238.7527995-CDS-H-elongata_contig17074:4396..4522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig17074 4397..4522 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig17074.4372.1

>prot_H-elongata_contig17074.4372.1 ID=prot_H-elongata_contig17074.4372.1|Name=mRNA_H-elongata_contig17074.4372.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=354bp
MDKRKRIAVVGSGPAGLAAATSCAERGHSVTLFEGAAHIGGQFNMAKLIP
GKEEFYETLRYFSRRIEVTGVDLRLNSKVDAASILAADPAFDAAILATGV
LPRRISFEGADHPKAILLIAFGKVLSYVDVLRGEANVGRKVAVIGAGGIG
FDVTEYLLGEQALKTPPEKRVMDISPFLKEWQIDRDLSHRGGLVQVKVRS
NSFPNDERHQREIWLCQRKKGGLGKGLGKTTGWIHRMSLKNQGVNMMAAV
SYEKVDDQGLHIKLDGEPRLLEVDHVVVCAGQEPLNDLQVPLQHAGMPVF
LIGGAEEAKELDAKRAIDQGTRLAAVIEDAKDGHVYNAPESLKEKVLHAF
TSD*
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mRNA from alignment at H-elongata_contig17074:2..6893-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig17074.4372.1 ID=mRNA_H-elongata_contig17074.4372.1|Name=mRNA_H-elongata_contig17074.4372.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6892bp|location=Sequence derived from alignment at H-elongata_contig17074:2..6893- (Himanthalia elongata Himel1 dioecious)
AGGGAGGACGAGTGGGGGGGAAGCTACGAGAACCGAATACGCTTCCCGGT GTCTATAGTGGAGGGCATTCGACAGGCCTGCGGGGACGACTTCATCATTA TATACAGACTTTCCATGCTAGATCTTATCGAGCGGGGCTCCAGCTGGTGA GCGTCGGATTCGTTTGCCGGCACACAGACACACACGCACACATAAGGTGA AACATGTCACAGACGTACGGTGAATGCTCATGCTAGGACTGAGGCTGCGG GACTGACGCCTGTTACAAGACAGCTCGTGGACAGAGACAGAGACAGAGCG GTACCTTAAGTGTGGTATGGTGTGGGGATGGCGCTATTGGGGTGTGGTGT CGTGGATCGTGTGACTGAAGCAGGTCATGTGCACGGGTCGGTGGTCCTCC ACATGGTCCGGCGACAGTCTTTACTAATCGTAATAGTAATAGTAGATAAT CACATGTGGGCCTAATCGTTCTGGCGGACATTAAAGCCTTACTTTGGAAT CAGTGAAAGCACTTTTATAGCTCAAAGCCCCAGCCAGTAAAATCACTTTT AATAACGCAATGCAATCGGTGGAACCATTATTAACCAGTATTAACTAGTA TTAGGGTTAGGGTTAGGGTTAGTATTAGCTAGCATTATTAATTAGTACGA AGTAGATCATTCACTGAAAAAGGTACAGAGAAAGAAAATATTGCAGTACC CTATTACTAACCCTAACCCTAACTAGTATTAACTAGTATTAGCCATTATT AATTAGTACGAAGTAGATCATTCACTGAAAAAGGTACAGAGAAAGAAAAT ATTGCAGTACCATACCCTATTACTAACCCTAACCGAAGTTTTTGAGACTA ACCCTAATAATACTAATAATACTAATACTGTGCAGTAGAAGGCCGTTCAG CGAATAAGGAGTAATGAGTGTCATCGCGTCCCCCGAGTTGGCCGCAACCC GCAATTGCTGTGATGGCGACGCCTCGCCTTACATGTCTTGAAGGAGGGAG ATTGTCGCCTTGGCCAAGAGGATAGAAAAAGCCGGCGCTTCCATTATCAA CACAGGCATCGGCTGGCATGAGGCGCGCATCCCTACGATCGCAACGAGCG TCCCGCGAGCAGGGTTTTCGTGGGTCACCAAGAATCTCAAGGGAGAGGTG TGAAAATGCACGAGCAGCTTCCTCGGTCCTAGTCACCGTGTCGTGTCGTG TCGTGTCATATTGGAGTCAGAAGTGTCCCATCTTGTCCGTCCTCTTTGCC CCGCTCCGACTGTTCCGTTGCCTAACCCTAACTCTAACCCTAAAGTGTTT CGAGTTGCTTTTCTGGGTGCGGGCGTCGTTGAATGGTACATCGAGGGGGG GGGTCGTATTTGAATGATACTAATGGAGTGCGACAATGGGGGTGATGGCG TGGATGCGGTGGGGCAGGTGTTGATCCCATTGATAGCGACGAACAGGATC AACATGCCTCACACGGCGGAGAGGGTACTGGCCGATGGACACGCAGACAT GATCTCCATGGCAAGGTAGTACAAGCCGGGAAAAGTTGTTGAAATGTTCT GAGGACTTGTTTGCCTGCCTCCTCGAGAGGTGCTCAATAAGTGCTCGAGA GGTGGCCAACGCTTGGATTTGGATTGCTCTGTTCCCCTAACTTGAGACCC TCGAACGTGTACGGCAGGGTGTACGGCAGTTGCTTTCCGCGTGGTTTATC CCGGCATACCGTACAATACCGTAACTTCGCGTTTTCTGTACTGTGACTGT GACTGTGACACCATGCTAGGCCTTTCTTAGCAGACCCGTTTTGGGTGCGA AAGGCGGCGGAGGGTCGAGAGGACGAGATAAACACATGTATTGGTTGCAA TCAGGCGTGCCTCGACCACACCTTCAAGGGGAAGGTAAGGCCATCGATGA TGAGTGACGCGTTTCGGCAAAGGTGCGTATGGGAAATGGGGACAGTACGC AATCATCCCAGATGGTAGGGGCGATGGAAGATCATTTTCGGCAGGGGTGA AGCTCCACAAGAGCTTGAGTTTATTCCTCTCACGAAGACTTATTTCACTT TTCCTAAGGAGCGATCTTGTTCCCCATGAGGGCCGTTTTTGTACCAGCCG TACGCCTGTGAATAATCGTCATAAACGTGAATAATCGTCATAAACGCACC ATGAGCTATTACACATGATGCTGAGCCTACACTGCTGCCGCCTACTTCAT GTATACCGTGGCGATGGAAATTGCTACTGTATAGTTTTAGAATATCGTTT TTCCTCATCAATATCGTCAATATCGCTGTTGTGACCACGGTTTTCGATGC CTCAGCAAGCATCGTGCCTCGTCAATCCCCGTGCGGGCTACGAAACGACC CTGAATCTCAAGCCCGTACCGATGGACAAGCGCAAGCGGATCGCCGTGGT TGGTTCAGGGCCGGCTGGGCTCGCTGCTGCCACTAGCTGCGCGGAGAGGG GACACTCGGTAACGCTCTTCGAAGGAGCTGCACACATCGGAGGCCAGGTA AGGGGAGCACCAGGGCATACAGCAGAACATGGCATACAGCAGAACATGGC ATACAGCAGAACATGGCATGCAGCAGAACATGGCATGTGATGTGATGTGA TATGAGGCACGAAAGGCGTAGGGGCATTGAAGTTCGCGTTCTCACTGTGT TGAGTATCTCCGCTGAGCGATATTCAAGGACAAGTTTCGCAATAGACAAG ACTGCCCGCCTCAACCAAGACAAGACCATCGCGTAACCCTAACCCTAACC CTGGTGCTGATTAAACTGCCCGCCTCAACCATGGCGGGACCCTACAGTTT AACATGGCGAAGCTCATCCCTGGGAAGGAAGAGTTCTACGAGACCCTTCG ATACTTCTCCAGGAGAATTGAGGTCACTGGCGTGGACCTGCGACTTAACT CCAAGGTCGACGCTGCATCGATTCTCGCTGCTGACCCAGCCTTCGACGCT GCCATCCTAGCCACCGGCGTGCTCCCAAGAAGAATCAGCTTCGAGGGCGC TGATCATCCTAAGGCAATATTATTAATAGCTTTCGGGGTTAGGGTTAGGC TGGAGCGGTTGACGTCATTGTGCAGACTTCGCTCGCTCTCCCGTGCCCAC GATACCCTTCACGTGGGTTTTACGTGCACCAACCAGTAGAGAGCAGAAAT CAGAGAGCGTGGGTTTGGATGGCATGACAACTATGACCTATAGAATGCTG CAATTGTTTCTGTTGTGCTTCATATTCGTCTCAAGAGTACCAACGCCTCA AGCGCTCGAAAGAGGTCTGTCTTCCTGTCTTCCTGTCTTTTTTGTATTGA TATTTAGTATTAGAACTGATAACTGATGGTATTTAGTATTAGAACTGATA ACTGATGGTATTTAGTATTAGAACTGATGGTATTTAGTATTAGAACTGAT GGTATTTAGTATTAGAACTGATGGTATTTAGTATTAGAACTGATGGTATT TAGTATTAGAACTGATGGTATTTAGTATTAGAACTGATGGTATTTAGTAT TAGAACTGATGGTATTTAGTATTAGAACTGATGGTATTTAGTATTAGAAC TGATGGTATTTAGTATTAGAACTGAGAACTGAGAAGGCCAGGGGTAAAAA ATGTTAGTCGCCTTCATCCTCGGGTTCACTGTAAGGGATGGAAGGGATGG ACTCCGTTCAAGTGTTTATTCAAGATGAGTAAGACGTCATTCCTCCGTCC TCCTCAAGAGGGTGGCAATGACAGTCCGTTGTCCGGTAAAAACGCCTAGT GTACTGCCTCCTTACACGAGTCGCCCTACCCATTCGGGCTTCGGACCTCA GACCTCAGACCTCGTGCCTTTCTGTCTCTCTTGCCCCTGCCTCTGTACTG TGTTGGAATGATACATTTTGATTATACATTTTGGACTACCTACATGGCTA CATGGAAATTTAATCGAAACGAGAAGGTGTTGAGCTACGTGGACGTGCTG CGTGGAGAGGCCAACGTAGGACGGAAGGTGGCAGTGATCGGAGCCGGAGG AATCGGGTTCGACGTGACGGAATATCTTTTGGGAGAACAAGCTCTCAAAA CTCCGCCCGAGAAGCGCGTCATGGACATTTCGCCCTTCCTCAAGGTGACA TGAGAACGTCTCTAACCCTATTGACGTCCTATTGGTGTCCTATTGATAAA CGGTCGTCGACGGCTCAAGTCGCGCCACCGTATCCATGGTGCTGCTCCTT CAAATAGTCCAGATTATCAAATAGAAAAGAGTATCAAAATCAAAAGCTTT ATTCTCAGTAATCTTCACATTTAAAGACAAAATTGTACACTGCTATATAT ATTGTAATATATTTTGTATCACCAATTGTATGGCTTCCAGGAGTGGCAAA TCGACCGCGACTTGTCTCATCGAGGAGGGCTTGTACAGGTTAAGGTTCGA TCAAATAGCTTCCCGAACGATGAGCGCCATCAGCGGGAAATATGGCTGTG AGTGCAGCATGGCGATCTTCTGTACCCGTCTACGATGTATAGTACAGTAT ATAGTATAGTATAGTATAGTATAGTTTAACTGGGATGTTTATGGGCAGCA GCAGCAGCATCAGCATCAACAACAATTATGGATATCAACAACCAGCCGAT GCGAAATGATAAGCTAGTTACAGACCTCATCCCGCGGCATTCTGCTTACG GCTATTGATTTATGTGTGGTCAAAGTCATCTCACGCTCCTAAGACTCTCT GGGCTAACATTATACCCAATACCCAATACTCAGCACGTGCTTTTCTTGCC GTACGGTCGCTTGGCGCTTATGGTTGCCACGTTTTTAACGGCTGTAACGC CTTCACGGCCCCATGCGGTGGACGTCCGCTGCGTAAAGGTGCCAAAGGAA GAAAGGTGGCCTTGGAAAGGGTCTGGGTAAAACGACGGGTTGGATACACC GCATGTCTCTGAAAAACCAAGGTGGGGTACAGTACACGGCATGGCATGGC ATGACACGGCACGTCTCTCTCAAGAAAGTTGGATTGTCTCTCTTCGGTAT AGTGAGTGAAGAATATTGGGAGGTTGGGAGGGAGTGTACTCAATTTTTGC ATGCCTCAGCTATTGAACAGGGCGCCTAGTCAACTTTGTGAAGAGGCGCG GTGCGGTCTCCTGCTCCCGCAGACTCTCTTTTAATAATTACTTGCAGTTC ATACAATAATTCCATATGTAATTAGGCAAATGTAGTGTTTCTTGGGGTAG TTGGTTGGCTTTGGCCACTGTTTGGTCACCTTAACAAGTCTATGGATGTA TTCAACTTTGAATTCTGCTGTGTGACCCATCAGACACCCTGCTGGCACGC TGTCCGCTGAATGGGTGATCTATCTACTATACTATGCTATAATGTGTTGA ATAGGGGTCAACATGATGGCAGCTGTTTCGTACGAGAAAGTAGATGACCA GGGACTACACATCAAGCTGGATGGCGAGCCGAGACTTTTGGAGGTTGATC ACGTCGTCGTCTGCGCTGGCCAAGAACCCCTGAATGATCTACAGGTACGA TCTACGAGTGTACGCTACCGCACATAACTGCGAGCAAGGTACGAGTTCTG CGTCGTGTGTCTGGTGAGGTGCTTGTAAATTAATTCAGTGATAAGAGTCG AACCATCGCTTGGGGAACGGTTCCGGTGTTTGCTTGGCGGAAGGGTCACA GTTAAAATTAGGGTTAGGGTTAGGGTTAGCGTTAGGGTTGGCTCTGATAA TAGCGCAGCGTAGGTTCAAATGACGTACAGCACCGCGTAGCATTGGCTAC TGAGCTTCAGCCGAGGTACAATATCGCCTGAATATTTTGATATGCTACTT TGGCAGGTCCCATTGCAACACGCCGGCATGCCTGTTTTCTTGATCGGCGG GGCTGAGGAGGCCAAGGAACTCGACGCTAAGCGAGCTATCGACCAAGGAA CACGACTGGCGGCTGTTATAGAAGATGCTAAAGATGGTCACGTGTATAAT GCACCGGAGAGCCTCAAAGAAAAGGTGGAGTAATGTAACTGTTGGCGAGA TGCCACATACGATCCGTGATCCACGATTGTCACATACGATCCGTGATCCA CGATTGCCATATACGATCCGTGATCCACGATTGCCACATACGATCCATGA TCCACATACCGTAGTAAACAGTAAGCATCATTTTTCCAAAACATGTTCAA CAGCTGTCACTTTGATAGAACTCTGTTAATAACCCTTATCATGGCAAGGA AGGACATGGATGCTCTATAGATGCTCTATAGTTGCACAGAGGATGAATAT TTCCTGTCGACGAAATATTGGCGAGCCGTGCAGGACCTCCCTACTTTAGA ACAACTTGAGATACGAGATACGATTTTCATTGCTTGTTTTAAGTTTTAAC TCTTATGGAACTCGATCTATTTTTTACATACTAAATTCAATACAAAAGTT GAAATCCAGTTCCAAAAGGGTTAAGCGACCAATTTTGCAATTCTGCGCTT GTACTACGCGTATTAACAGGTGTTGCACGCCTTCACCTCGGACTGAGCAG GCGTTACAGTATTTTCGAGGAGGCGTTATCTTCGAGGACGCACGAGGTTT ATCCACTCGTTGATCCACTCGTGCCGATGGCAAGTCTAGTTCGTCTGCTA GTTTATAAATAAGAGCTAGCAATGCCTACGCGCAAACTTTGGACGAGGGT TTCCGTGTGGGGCCTAGTGATTTTGACGATTTCGAGGGATATCTAGGGTT TAGTCTTTTAACCCTTTGGTTGTATTGCCTACGCCTAGCCAGAGCCCTCA CTCAGATAACCCGACAATCGGCAGACACCCCCACCTAGCGTGGCTTGACG GCGTCAAGTGTTGTTGGTATGGTTGTATGAATCGTGGTGTAAGGGTCAAG CCGTCTTCCTTGATCCCCGGAAGTAGTGAGTTCGAATCCTGG
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Coding sequence (CDS) from alignment at H-elongata_contig17074:2..6893-

>mRNA_H-elongata_contig17074.4372.1 ID=mRNA_H-elongata_contig17074.4372.1|Name=mRNA_H-elongata_contig17074.4372.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2124bp|location=Sequence derived from alignment at H-elongata_contig17074:2..6893- (Himanthalia elongata Himel1 dioecious)
ATGGACAAGCGCAAGCGGATCGCCGTGGTTGGTTCAGGGCCGGCTGGGCT
CGCTGCTGCCACTAGCTGCGCGGAGAGGGGACACTCGGTAACGCTCTTCG
AAGGAGCTGCACACATCGGAGGCCAGATGGACAAGCGCAAGCGGATCGCC
GTGGTTGGTTCAGGGCCGGCTGGGCTCGCTGCTGCCACTAGCTGCGCGGA
GAGGGGACACTCGGTAACGCTCTTCGAAGGAGCTGCACACATCGGAGGCC
AGTTTAACATGGCGAAGCTCATCCCTGGGAAGGAAGAGTTCTACGAGACC
CTTCGATACTTCTCCAGGAGAATTGAGGTCACTGGCGTGGACCTGCGACT
TAACTCCAAGGTCGACGCTGCATCGATTCTCGCTGCTGACCCAGCCTTCG
ACGCTGCCATCCTAGCCACCGGCGTGCTCCCAAGAAGAATCAGCTTCGAG
GGCGCTGATCATCCTAAGGCAATATTATTAATAGCTTTCGGGTTTAACAT
GGCGAAGCTCATCCCTGGGAAGGAAGAGTTCTACGAGACCCTTCGATACT
TCTCCAGGAGAATTGAGGTCACTGGCGTGGACCTGCGACTTAACTCCAAG
GTCGACGCTGCATCGATTCTCGCTGCTGACCCAGCCTTCGACGCTGCCAT
CCTAGCCACCGGCGTGCTCCCAAGAAGAATCAGCTTCGAGGGCGCTGATC
ATCCTAAGGCAATATTATTAATAGCTTTCGGGAAGGTGTTGAGCTACGTG
GACGTGCTGCGTGGAGAGGCCAACGTAGGACGGAAGGTGGCAGTGATCGG
AGCCGGAGGAATCGGGTTCGACGTGACGGAATATCTTTTGGGAGAACAAG
CTCTCAAAACTCCGCCCGAGAAGCGCGTCATGGACATTTCGCCCTTCCTC
AAGAAGGTGTTGAGCTACGTGGACGTGCTGCGTGGAGAGGCCAACGTAGG
ACGGAAGGTGGCAGTGATCGGAGCCGGAGGAATCGGGTTCGACGTGACGG
AATATCTTTTGGGAGAACAAGCTCTCAAAACTCCGCCCGAGAAGCGCGTC
ATGGACATTTCGCCCTTCCTCAAGGAGTGGCAAATCGACCGCGACTTGTC
TCATCGAGGAGGGCTTGTACAGGTTAAGGTTCGATCAAATAGCTTCCCGA
ACGATGAGCGCCATCAGCGGGAAATATGGCTGAGTGGCAAATCGACCGCG
ACTTGTCTCATCGAGGAGGGCTTGTACAGGTTAAGGTTCGATCAAATAGC
TTCCCGAACGATGAGCGCCATCAGCGGGAAATATGGCTGTGCCAAAGGAA
GAAAGGTGGCCTTGGAAAGGGTCTGGGTAAAACGACGGGTTGGATACACC
GCATGTCTCTGAAAAACCAAGGTGCCAAAGGAAGAAAGGTGGCCTTGGAA
AGGGTCTGGGTAAAACGACGGGTTGGATACACCGCATGTCTCTGAAAAAC
CAAGGGGTCAACATGATGGCAGCTGTTTCGTACGAGAAAGTAGATGACCA
GGGACTACACATCAAGCTGGATGGCGAGCCGAGACTTTTGGAGGTTGATC
ACGTCGTCGTCTGCGCTGGCCAAGAACCCCTGAATGATCTACAGGGGTCA
ACATGATGGCAGCTGTTTCGTACGAGAAAGTAGATGACCAGGGACTACAC
ATCAAGCTGGATGGCGAGCCGAGACTTTTGGAGGTTGATCACGTCGTCGT
CTGCGCTGGCCAAGAACCCCTGAATGATCTACAGGTCCCATTGCAACACG
CCGGCATGCCTGTTTTCTTGATCGGCGGGGCTGAGGAGGCCAAGGAACTC
GACGCTAAGCGAGCTATCGACCAAGGAACACGACTGGCGGCTGTTATAGA
AGATGCTAAAGATGGTCACGTGTATAATGCACCGGAGAGCCTCAAAGAAA
AGGTCCCATTGCAACACGCCGGCATGCCTGTTTTCTTGATCGGCGGGGCT
GAGGAGGCCAAGGAACTCGACGCTAAGCGAGCTATCGACCAAGGAACACG
ACTGGCGGCTGTTATAGAAGATGCTAAAGATGGTCACGTGTATAATGCAC
CGGAGAGCCTCAAAGAAAAGGTGTTGCACGCCTTCACCTCGGACTGAGTG
TTGCACGCCTTCACCTCGGACTGA
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