mRNA_H-elongata_contig170424.4358.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A6H5L5H3_9PHAE (Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5H3_9PHAE) HSP 1 Score: 154 bits (390), Expect = 3.000e-41 Identity = 83/108 (76.85%), Postives = 86/108 (79.63%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERA---RREGDPEEVSGIVPQSLVELFRLLEERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLREMVRTGS 315
+GAGKTHTMMGSER R +P EVSGIVPQSLVELFRLL RA GSGEE E ETWSVR GYLQVYNEQIMDLLS SKPLKINEDP KG+VVVAGL EM T S
Sbjct: 48 TGAGKTHTMMGSERVVGVRAGDEPTEVSGIVPQSLVELFRLLAARAEVGSGEEDEAETWSVRVGYLQVYNEQIMDLLSDSSKPLKINEDPAKGVVVVAGLAEMEVTSS 155
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A397AAE3_9STRA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AAE3_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.470e-21 Identity = 59/134 (44.03%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERARREGDPE----------------EVSGIVPQSLVELFRLL------EERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLREM-VRTGSPLSELL 333
+GAGKTHTMMGSER D + V GI+P +L ++FRL+ EE A G + WSV YL+VYNEQI DLL+P S+PL + EDP KG+V VAGL + V T S + +LL
Sbjct: 4 TGAGKTHTMMGSERDGSGDDNQLGHXXXXXXXXXXNVPHVDGIIPHALTDIFRLINSARADEEDASVAEGLGFQ---WSVVVTYLEVYNEQIRDLLNPSSRPLALREDPVKGVVHVAGLHHVTVETSSQVLQLL 134
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A485LD64_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD64_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.100e-20 Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 1 SGAGKTHTMMGSER--------ARREGDPE--EVSGIVPQSLVELFRLLEERAGAGSG---EEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLREM-VRTGSPLSELL 333
+GAGKTHTMMGSER + D E +V GI+P SL ++FRL+ ER +G W+V YL+VYNEQI DLL+P ++PL + EDP KG+V VAGL + VR + + +LL
Sbjct: 156 TGAGKTHTMMGSERDGCTDNNQVMDDDDDEVPQVDGIIPHSLTDIFRLIAERRAEQQAMMLSDGTGFRWNVVVTYLEVYNEQIRDLLNPSNRPLALREDPVKGVVNVAGLHHVEVRNSAEVLQLL 280
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A024UPZ7_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPZ7_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.420e-19 Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERARREG----------DPEEVSGIVPQSLVELFRLL----EERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLREMV 303
+GAGKTHTMMGSER + D V GI+P SL ++FRL+ EE A A E G W+V YL+VYNEQI DLL P ++PL + EDP KG+V VAGL +V
Sbjct: 110 TGAGKTHTMMGSERDGSDDNQLDHHDDDDDVPHVDGIIPHSLTDIFRLISRAREEEAEAAVAE-GLGFNWTVVVTYLEVYNEQIRDLLHPSNRPLALREDPVKGVVHVAGLHHVV 223
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A397FLK9_9STRA (Kinesin motor domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FLK9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.560e-19 Identity = 59/130 (45.38%), Postives = 75/130 (57.69%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERARREGDPE------------EVSGIVPQSLVELFRLL------EERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLREM-VRTGSPLSELL 333
+GAGKTHTMMGSER D + V GI+P +L ++FRL+ EE A G + WSV YL+VYNEQI DLL+P S+PL + EDP KG+V VAGL + V T S + +LL
Sbjct: 802 TGAGKTHTMMGSERDGSGDDNQLGHHDDDDDNVPHVDGIIPHALTDIFRLINSARADEEDASVAEGLGFQ---WSVVVTYLEVYNEQIRDLLNPSSRPLALREDPVKGVVHVAGLHHVTVETSSQVLQLL 928
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A1V9ZQM7_9STRA (Kinesin-like protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQM7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 6.840e-19 Identity = 55/126 (43.65%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERARR-----------EGDPEEVSGIVPQSLVELFRLL---EERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLREM-VRTGSPLSELL 333
+GAGKTHTMMG R + +G P+ +GI+PQSL ++FRL+ +E A EG +W+V YL+VYNE I DLL+PKSK L + ED KG+V V+GLR + V + + + +LL
Sbjct: 102 TGAGKTHTMMGKHRDSKSYDEFIDDEYEDGVPD--TGIIPQSLSDIFRLIHIRQEEEKAQHENEGGSSSWTVTVSYLEVYNEAIRDLLNPKSKNLSLREDAQKGVVHVSGLRHVDVASATDVLDLL 225
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A8K1CIS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS1_PYTOL) HSP 1 Score: 88.6 bits (218), Expect = 4.630e-18 Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERARR------EGDPEEVSGIVPQSLVELFRLL------EERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLR-EMVRTGSPLSELL 333
+GAGKTHTMMGSER + D +V GI+P +L ++FR++ EE G E W V YL+VYNEQI DLL P ++ L + EDP +GIV VAGL E V + + +LL
Sbjct: 116 TGAGKTHTMMGSERDGLGEFDDFDDDDYQVDGIIPHALTDIFRIIRCRQEEEEYLNIAQGSTFE---WKVLVSYLEVYNEQIRDLLQPSTRALSLREDPARGIVQVAGLHHEEVNSVGQVMQLL 236
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: W7TJK0_9STRA (Kinesin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJK0_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.730e-18 Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERARREGDPEEVSGIVPQSLVELFRLLEERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSP---KSKPLKINEDPGKGIVVVAGLREM-VRTGSPLSELL 333
+GAGKT TMMGS A G+ V+G++PQSL ++F +E R W V Y++VYNEQI DL+ P + +PL++ EDP KG+VVVAGL EM VR + + +LL
Sbjct: 117 TGAGKTFTMMGSSCAAA-GESAPVTGVIPQSLSDVFATIERRKRTAPPNS----QWQVFCSYMEVYNEQIYDLIGPGAGRGQPLQLREDPSKGVVVVAGLPEMLVRDTAQVLDLL 226
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A835YL84_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL84_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.100e-17 Identity = 54/112 (48.21%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 1 SGAGKTHTMMGSERARREGDPEE-------------VSGIVPQSLVELFRLLEERAGAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLRE 297
+GAGKTHTM S G SGI+PQSLV++FR +E R AGSG ETWSVR YL+VYNEQI+DLL P L++ ED +G+V VAGL E
Sbjct: 137 TGAGKTHTMGSSGTTCGSGXXXXXXXXXXXXXXXXXASGIMPQSLVDVFRGVEARRRAGSG--ARAETWSVRVSYLEVYNEQILDLLEPGGC-LQVCEDKARGVVKVAGLAE 245
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Match: A0A024FZR4_9STRA (Kinesin-like protein n=13 Tax=Albugo candida TaxID=65357 RepID=A0A024FZR4_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.060e-17 Identity = 55/136 (40.44%), Postives = 69/136 (50.74%), Query Frame = 1
Query: 1 SGAGKTHTMMGSER---------------ARREGDPEEVSGIVPQSLVELFRLLEERA---GAGSGEEGEIETWSVRAGYLQVYNEQIMDLLSPKSKPLKINEDPGKGIVVVAGLR-EMVRTGSPLSELLVNRLRY 351
+GAGKTHTMMGSER + + V GI+PQ+L ++F+ + R G + G I W V YL+VYNEQI DLL P PL + ED KGIV VAGL E + + E L RY
Sbjct: 113 TGAGKTHTMMGSERDGLILPSECSEEMEDLQSQDSVLSVDGIIPQALADIFQSIHNRKAEEGQLRMQNGTIFEWEVMISYLEVYNEQIRDLLRPSDTPLALREDTAKGIVHVAGLHYENAHSAEEVLEFLRRGNRY 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig170424.4358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig170424.4358.1 >prot_H-elongata_contig170424.4358.1 ID=prot_H-elongata_contig170424.4358.1|Name=mRNA_H-elongata_contig170424.4358.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp MMGSERARREGDPEEVSGIVPQSLVELFRLLEERAGAGSGEEGEIETWSVback to top mRNA from alignment at H-elongata_contig170424:14..526- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig170424.4358.1 ID=mRNA_H-elongata_contig170424.4358.1|Name=mRNA_H-elongata_contig170424.4358.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=513bp|location=Sequence derived from alignment at H-elongata_contig170424:14..526- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig170424:14..526- >mRNA_H-elongata_contig170424.4358.1 ID=mRNA_H-elongata_contig170424.4358.1|Name=mRNA_H-elongata_contig170424.4358.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at H-elongata_contig170424:14..526- (Himanthalia elongata Himel1 dioecious)back to top |