mRNA_H-elongata_contig17037.4354.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: D7FUV2_ECTSI (Methylase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV2_ECTSI) HSP 1 Score: 237 bits (605), Expect = 2.800e-77 Identity = 114/181 (62.98%), Postives = 142/181 (78.45%), Query Frame = 1
Query: 1 MHAMGYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWDTNAIPMHESEGLFVYVCTKWSREKIEET-KTRQKELETETSIQKQSSTGYFLHGGRRGIVHGNQIIHVV 540
MHA+GYRCITA+DISAT I LMQA DQ+KEGIEY++GDARKMDS PD L+D I DKGCADSL+CG R TDDVVDMF ECCRVLRP G+FLC SHG PD R+++F HE LQW TN IP+H SEGL VYV TKW++E+IE + R ++E+ S++ +S+T RRGI+H N+I++ +
Sbjct: 1 MHALGYRCITAMDISATAIGLMQAGDQDKEGIEYMVGDARKMDSLPDNLFDGIFDKGCADSLICGYRTTDDVVDMFHECCRVLRPSGVFLCVSHGAPDARMHMFEHEGLQWLTNVIPIHGSEGLNVYVSTKWTQEEIEAAERQRLDDIESTISMRTRSTTFSHSTRSRRGIMHQNRIVYAM 181
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A383VKH7_TETOB (Methyltransf_11 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKH7_TETOB) HSP 1 Score: 87.0 bits (214), Expect = 1.070e-17 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 1
Query: 13 GYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWDTNAIPM 354
GY+ I +DIS+ ++ MQ + ++Y +GDAR M +G +D ++DKG D+++CG A D+ M EC RVLRP G+ + ++GEP +RL L W M
Sbjct: 63 GYQSILNIDISSVVVQHMQELHKSIPQLQYRVGDARSMPEFKNGAFDAVIDKGTLDAVLCGEHAGDNATSMLDECSRVLRPGGVLMVVTYGEPCSRLPLLLQPCYGWHVELYVM 176
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A0G4IFX1_9ALVE (Methyltranfer_dom domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IFX1_9ALVE) HSP 1 Score: 87.0 bits (214), Expect = 1.120e-17 Identity = 45/107 (42.06%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 1 MHAMGYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQ-PDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRL-YLFR 315
M+ G+ IT +DIS +I MQ + Q+K G+ ++ +A M + DGLYDC++DKG DS++CG +T ++ M RE RVL+P GI++ S+G+P R+ YL R
Sbjct: 58 MYEDGFHDITNIDISTIVIKNMQEKYQDKPGLSFMQLNALDMKEKFSDGLYDCVIDKGTMDSILCGEGSTHNIQTMLREVSRVLKPNGIYIVISYGQPSYRMSYLQR 164
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A813HVE0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HVE0_POLGL) HSP 1 Score: 85.1 bits (209), Expect = 5.300e-17 Identity = 47/135 (34.81%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 1 MHAMGYRCITALDISATIIALMQAEDQE-KEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWDTN--AIPMHESEGL-FVYVCTK 393
M+ GY+ IT++D + T I M A ++ + ++++ DA KM + G++D ++DK D+ CG A+ + EC RVLRP+G+FLC S+G P+TRL FR + L++ A+P+ + + YV T+
Sbjct: 100 MYDHGYKSITSIDNAGTCILQMAARNKVMRPELKWLKMDATKMQFEK-GIFDAVIDKSVIDTFACGDNASLVICAYLAECWRVLRPKGVFLCISYGNPETRLAFFRQKNLEFSVRHVALPVRSAGSAHYAYVLTR 233
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A1Y1HM77_KLENI (S-adenosyl-L-methionine dependent methyltransferases n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HM77_KLENI) HSP 1 Score: 85.1 bits (209), Expect = 7.000e-17 Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 1
Query: 13 GYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWDTN 342
GY IT +DIS T+I M+ + + +++V DAR M G D ++DKG D+LMCG AT++V M E R+LRP G++L S+GEP TR+ W T+
Sbjct: 82 GYYDITNVDISPTVIKAMKMKHLDLPQLKWVCADARSMTIFKSGSLDAVIDKGTLDALMCGDEATENVNSMVSEVFRLLRPGGVYLMVSYGEPTTRMPYLGPSRRAWSTS 191
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A7J7QH74_9CHLO (Methyltransferase-like protein 13-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QH74_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 7.960e-17 Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 13 GYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQW 333
GY+ I DIS+ ++ MQ + ++Y + DAR M DG +D ++DKG D+++CG A D+ M EC RVLRP G+ + ++GEP +RL L W
Sbjct: 63 GYQSILNTDISSVVVRHMQDLHKAMPQLQYRVADARSMPEFKDGAFDAVIDKGTLDAVLCGEHAGDNATSMLDECSRVLRPGGVLVVVTYGEPCSRLPLLLQPCYGW 169
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A813JUP2_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JUP2_POLGL) HSP 1 Score: 83.6 bits (205), Expect = 1.220e-16 Identity = 42/145 (28.97%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 1 MHAMGYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWD-------------TNAIPMHESEGL-FVYVCTK 393
M+ G+ I +DI+ T++ MQ + ++K G+ Y D R M+ PD ++ ++DK C D+++CG +T + + E RVL+P G+++C SHG+P RL + W T ++ + + + ++YVC K
Sbjct: 58 MYEEGFHNINNIDIAMTVVKQMQEKYRDKPGMTYAQMDGRSMEL-PDANFNTVIDKACLDAVLCGEGSTHNAQKILTEVSRVLQPNGVYICISHGQPSYRLTYLQRPEFGWTVKTYTVQKPMMGMTASLSADDKDNVHYIYVCVK 201
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A482SVL7_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVL7_9ARCH) HSP 1 Score: 85.1 bits (209), Expect = 2.180e-16 Identity = 47/137 (34.31%), Postives = 74/137 (54.01%), Query Frame = 1
Query: 1 MHAMGYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWDTNAIPMHES--EGLFVYVCTKWSRE 405
++ G+R ITA+DIS T+I MQ + + G+E+++ DAR M D + I DKGC D+L CG + +E RVL+ EG+F+ +H R+ FR W + +H S EGL +++ T+ S +
Sbjct: 139 LYVHGFRDITAIDISQTLIMQMQKQYESYPGVEFMVMDARYMHKFADETFTVIFDKGCVDTLFCGTDYFESSTRAMKEIYRVLKHEGVFMTVTHAPAIGRVPYFR--TAPWAIESYMVHASIGEGLTLFILTRTSNQ 273
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A7R9U186_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U186_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-15 Identity = 45/146 (30.82%), Postives = 74/146 (50.68%), Query Frame = 1
Query: 1 MHAMGYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYDCIVDKGCADSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWDTNAIPMHESEGL---------FVYVCTKWSREKI 411
M A GY I +D+S TI+ +MQ + + + + + D RK++ D YD ++DKG D+L+C A +D E RVL+P+G++ S+G PDTRL L W + + + E ++Y+C K E++
Sbjct: 58 MAADGYDEIVNIDVSETIVRVMQ---ERAQNMSFYVMDMRKLEFT-DEEYDAVIDKGTLDTLLCMETAAEDAKQGLMEISRVLKPQGVYFMVSYGAPDTRLPYLEDGDLSWSVSVHKVEKPEAAIAKGKPGYHYIYICQKGGLEQV 199
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Match: A0A7S2XWS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS2_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.600e-15 Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 178 DSLMCGIRATDDVVDMFRECCRVLRPEGIFLCTSHGEPDTRLYLFRHELLQWDTNAIPMHESEGLFVYVCTK 393
DSL CG R DDV+ M +E CRVL P G FL +HG P+TRL RH L W +P+ S+G+ +Y TK
Sbjct: 3 DSLFCGYRCMDDVLQMCQEVCRVLMPGGCFLEFTHGHPETRLTYLRHPSLGWTVEHVPIVNSQGIHLYAITK 74 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17037.4354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17037.4354.1 >prot_H-elongata_contig17037.4354.1 ID=prot_H-elongata_contig17037.4354.1|Name=mRNA_H-elongata_contig17037.4354.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp MHAMGYRCITALDISATIIALMQAEDQEKEGIEYVIGDARKMDSQPDGLYback to top mRNA from alignment at H-elongata_contig17037:1671..3761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17037.4354.1 ID=mRNA_H-elongata_contig17037.4354.1|Name=mRNA_H-elongata_contig17037.4354.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2091bp|location=Sequence derived from alignment at H-elongata_contig17037:1671..3761- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17037:1671..3761- >mRNA_H-elongata_contig17037.4354.1 ID=mRNA_H-elongata_contig17037.4354.1|Name=mRNA_H-elongata_contig17037.4354.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig17037:1671..3761- (Himanthalia elongata Himel1 dioecious)back to top |