mRNA_H-elongata_contig16972.4326.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: D7FKR6_ECTSI (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR6_ECTSI) HSP 1 Score: 414 bits (1064), Expect = 1.350e-143 Identity = 191/236 (80.93%), Postives = 213/236 (90.25%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLPKFEAKY 708
KLIMSSSPSTRFDG +IDGLKE +L+ P FL+LYAESK KGE AVL+ACSD LLTVAIAPHQIYGPRDNLF+P +LEAAGKGQLRVFGNGKNKVSFTY+DNYCHGLILGYDALY+GSP LG FYIVTDGGWQYFWRV+D AG+AMGF+SLF K KLP LLMV VG +C IGW LGRKL++NPFTVKML+IHRWFDISAAERDLKYKPIV+FE+GFS+T WLKE+WLP F+AK+
Sbjct: 112 KLIMSSSPSTRFDGNDIDGLKEDELEYPKKFLQLYAESKAKGEVAVLEACSDSLLTVAIAPHQIYGPRDNLFMPSLLEAAGKGQLRVFGNGKNKVSFTYLDNYCHGLILGYDALYQGSPALGNFYIVTDGGWQYFWRVIDGAGMAMGFKSLFDKMKLPTLLMVPVGYVCAGIGWILGRKLRVNPFTVKMLIIHRWFDISAAERDLKYKPIVTFEEGFSKTIAWLKEDWLPTFKAKH 347
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A7S3Y444_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y444_HETAK) HSP 1 Score: 327 bits (837), Expect = 4.480e-109 Identity = 154/231 (66.67%), Postives = 181/231 (78.35%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLPK 693
KL+ SSSPSTRFDG +IDGLKES + P FLELYAE+K GE AV +ACS +L TVAIAPHQ+YGPRD LFLP +LEA G G+LRVFG G+NKVSF ++DNY HGLILGYDALY+ SP L KFYIVTDG Q FWRVLD+AG AMGF SLF K LP L++ V I +GW LGR+ K+NPFTVKML IHRWF+I AA +DL Y+PIV+FE+G++ T W +E WLPK
Sbjct: 117 KLVYSSSPSTRFDGSDIDGLKESQMSYPKKFLELYAETKAMGERAVFEACSPELRTVAIAPHQVYGPRDTLFLPNLLEAIGNGKLRVFGRGENKVSFCHVDNYAHGLILGYDALYEHSPALAKFYIVTDGPPQKFWRVLDAAGQAMGFTSLFRKFHLPVFLLMGVAYILELLGWMLGRRFKVNPFTVKMLTIHRWFNIEAARQDLGYEPIVTFENGWADTMHWFRENWLPK 347
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A7S2UZ88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ88_9STRA) HSP 1 Score: 320 bits (819), Expect = 2.330e-106 Identity = 143/231 (61.90%), Postives = 184/231 (79.65%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLPK 693
+L+MSSSPSTRFDG +I+GL DLKIPD F+++YAE+K GE A DAC D L+TVAIAPHQ+YGPRD+LFL +L G G+LR+FG+GKN VSF ++DNYCHGLILGYDAL+KGSP LG+FYIVTDG Q FW+V+D AG+AMGF+SL++K LP +L++ + IC +G L RK K+ PF+VKML IHR+FDI AA++DLKY+P++ F+ G+ T DW K+ WLPK
Sbjct: 116 RLVMSSSPSTRFDGNDIEGLGVEDLKIPDKFVQIYAETKAMGEKACRDACCDTLMTVAIAPHQVYGPRDSLFLNNLLHPIGNGKLRIFGSGKNMVSFCHVDNYCHGLILGYDALHKGSPALGRFYIVTDGPPQQFWKVIDQAGVAMGFRSLWTKFHLPIMLLMVLAHICDFLGMLLNRKFKLTPFSVKMLTIHRYFDIEAAKKDLKYEPLIEFDKGWLETIDWFKQNWLPK 346
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A835Z5A6_9STRA (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A6_9STRA) HSP 1 Score: 315 bits (806), Expect = 2.650e-104 Identity = 142/230 (61.74%), Postives = 179/230 (77.83%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLP 690
KL+MS SPSTRFDG +IDGL E+ LK P +L+LYAE+K E +L AC D+L T++IAPHQ+YGPRD+LFL +L AG+G+LR+FG G NK SFTY+DNYCHGLILGYDAL GSP LGKFYIVTDGG+Q FW+VLD A +AMGF S+++KTKLP LL++ + IC IG+ L K+++NPF VKML IHRWF+I AA +DL YKP+ +F+ G+ T +W K WLP
Sbjct: 113 KLVMSGSPSTRFDGNDIDGLTEAQLKYPKKYLQLYAETKALAEQEILAACCDELQTISIAPHQVYGPRDSLFLVNLLTVAGQGRLRIFGKGDNKCSFTYVDNYCHGLILGYDALRPGSPALGKFYIVTDGGYQIFWKVLDHAVVAMGFTSIWTKTKLPYLLLMVLAYICNVIGFLLRTKMRLNPFNVKMLTIHRWFNIDAATKDLGYKPLYTFDQGWDTTCEWFKTVWLP 342
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A7S4LLS6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLS6_9EUGL) HSP 1 Score: 303 bits (775), Expect = 3.030e-99 Identity = 140/228 (61.40%), Postives = 178/228 (78.07%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDK--LLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKE 678
+++MSSSPSTR DGG+I+GL+E +KIP FL+ YAESK GE A+ +AC+++ LTVA+APHQ+YGPRD LFLP +L A+ G+LR+FG+G+N++S ++DNYCHGLILGY ALYKGSP LGKFYIVTDGG + FW +LD A + +G SLF+KTKLP LM+TV IC +G+ L RK K+ PFTVKML IHRWFDIS AERDL YKP++ FEDG+ W K+
Sbjct: 131 RIVMSSSPSTRMDGGHIEGLREDQMKIPKKFLQDYAESKAAGEVALREACNEEEDFLTVAVAPHQVYGPRDALFLPNLLSASYNGKLRIFGDGENEISVCHVDNYCHGLILGYLALYKGSPALGKFYIVTDGGKKKFWHILDDAMVQLGCTSLFTKTKLPIWLMMTVAYICNVLGFILRRKFKLTPFTVKMLYIHRWFDISNAERDLGYKPLIKFEDGWQDMIAWFKD 358
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A448Z5Q8_9STRA (3Beta_HSD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5Q8_9STRA) HSP 1 Score: 300 bits (767), Expect = 4.620e-98 Identity = 138/239 (57.74%), Postives = 179/239 (74.90%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLPKFEAKYSKK 717
KL+ SSSPSTRF GG+++GL E D+ IPD F+ LYAE+K GE AV ACSD LLT+++APHQ+YG D+LFLPK+LEAAG G LRVFG G+NK+S +IDNY HGL+ G DALYK SP L KFY++TD QYFW++L+ A IAMGF LFSK LP L+ +V IC + + G++ K+ PFTVKML+IHR+F+I A+RDL YKP++SFE G+ T +W K WLP+++ +KK
Sbjct: 140 KLVYSSSPSTRFRGGDVEGLSEDDMPIPDQFVALYAETKAAGEKAVEKACSDSLLTISVAPHQLYGEYDSLFLPKLLEAAGSGNLRVFGKGENKISLCHIDNYSHGLLCGADALYKNSPALAKFYVITDDEPQYFWKILNQAVIAMGFADLFSKFHLPVWLLYSVAYICDFVSFLTGKQFKLKPFTVKMLIIHRYFNIKNAKRDLLYKPLISFEKGWPETIEWFKINWLPEYQKVGTKK 378
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A7S2SV77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV77_9STRA) HSP 1 Score: 301 bits (770), Expect = 4.660e-98 Identity = 142/243 (58.44%), Postives = 181/243 (74.49%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDL-KIPDT-FLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDG-------GWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLPKFEA 702
KLI SSSPSTRFDG ++DGL E + IP +L+ YA++K GE AV ACS+ L+TVAIAPHQ+YGPRDNLFLP +LE AG+G LR+FG G N++ F+++DNYCHGLILG ALY GSP LGKFYIVTDG G FW LD A +AMGFQS++SK KLP ++ + +C IGW +G K+K+NPF V++L +HRWFDISAAE DLKYKP++S++ G++ T W KE WLP F++
Sbjct: 134 KLIFSSSPSTRFDGSDVDGLSEEQMPSIPQRKYLQDYAKTKAMGELAVSAACSEDLMTVAIAPHQVYGPRDNLFLPNMLEVAGQGMLRIFGGGHNRICFSHVDNYCHGLILGSTALYPGSPALGKFYIVTDGSTHPDPRGCCEFWVELDKAVVAMGFQSIWSKFKLPVWFLMPIAYLCLFIGWIIGVKIKLNPFAVRVLTMHRWFDISAAENDLKYKPVISYKQGWAETIAWFKENWLPDFQS 376
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A061R3Y9_9CHLO (Nad-dependent steroid dehydrogenase-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R3Y9_9CHLO) HSP 1 Score: 296 bits (758), Expect = 6.220e-97 Identity = 140/240 (58.33%), Postives = 178/240 (74.17%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKI--PDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWL---KEEWLPKFEAK 705
K++MSSSPSTRFDG ++ GL ES LKI P FL+ YAE+K GE A+ +AC ++L+TVAIAPHQ+YGPRD+LFLP +L AA G+LR+FG G NKV+FT++DNYCH LILGYDALY GS LG+FYI TDGG + FW VLD A + MG+ L +K KLP LM+ IC IG+ GRK+K+ PF V+ML+I RWF+I AA++DL YKP++SFE G+ T +W KE W+ K E K
Sbjct: 112 KIVMSSSPSTRFDGSSVRGLAESQLKIQDPGKFLQAYAETKAMGEIALREACCEELMTVAIAPHQVYGPRDSLFLPSLLHAAKTGKLRIFGKGDNKVAFTHVDNYCHALILGYDALYPGSAALGQFYIATDGGSELFWHVLDQAVVRMGYTPLRNKLKLPTGLMMVAAYICNLIGYVTGRKMKLTPFAVRMLVIDRWFNIDAAKKDLGYKPLISFEHGWQETIEWFADNKEWWIAKAEGK 351
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: A0A1E7FGB3_9STRA (NAD(P)-binding protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGB3_9STRA) HSP 1 Score: 296 bits (759), Expect = 7.500e-97 Identity = 132/234 (56.41%), Postives = 177/234 (75.64%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVFGNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDGGWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLPKFEA 702
KL+ SSSPSTRF GG+++GL E ++ IPD F+ LYAE+K KGE AV ACSD LLTV++APHQ+YGP D LFLPK+LEAAG G+LR+FG G+NK+S +IDNYC GL+ G D+LY+GSP L FY+VTD G QYFW+ ++ AG+AMGF L +K LP L+ +V C + + G++ K+ PFTVKML+IHR+F+I A RDL+YKP++SF+ G+ T +W + WLP ++A
Sbjct: 140 KLVYSSSPSTRFTGGDVEGLSEDEMPIPDKFVALYAETKAKGEKAVSQACSDTLLTVSVAPHQLYGPYDTLFLPKLLEAAGSGKLRIFGKGQNKISLCHIDNYCVGLLCGADSLYRGSPTLSNFYVVTDDGPQYFWKTINQAGVAMGFVDLETKFHLPVWLLYSVAYFCNFLTFLTGKQFKLKPFTVKMLIIHRYFNIKNARRDLQYKPLISFDKGWPDTIEWFRINWLPDYKA 373
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Match: F2UJP1_SALR5 (Reductase with NAD or NADP as acceptor n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UJP1_SALR5) HSP 1 Score: 297 bits (760), Expect = 9.850e-97 Identity = 144/247 (58.30%), Postives = 180/247 (72.87%), Query Frame = 1
Query: 1 KLIMSSSPSTRFDGGNIDGLKESD---LKIPDTFLELYAESKEKGETAVLDACSDKLLTVAIAPHQIYGPRDNLFLPKILEAAGKGQLRVF-----GNGKNKVSFTYIDNYCHGLILGYDALYKGSPVLGKFYIVTDG-------GWQYFWRVLDSAGIAMGFQSLFSKTKLPALLMVTVGQICGAIGWCLGRKLKINPFTVKMLLIHRWFDISAAERDLKYKPIVSFEDGFSRTQDWLKEEWLPKF 696
KL+MSSSPSTRFDG ++DGL E+ L +P +++ YAE+K GE AV ACS L+TV++APHQ+YGPRDNLF+P ILEAAG G LR+F G G NKV FT++DNYCHGL+ AL+K SP LGKFYIVTDG G+ +FW+VLD AMGF S++SK KLP L++ + IC IGW GRKLK+NPF V++L +HRWFDIS AERDLK+ PI+SF DG+ T D+ KE WLP+F
Sbjct: 131 KLVMSSSPSTRFDGSDVDGLTEAQMPALPLP-RYMQTYAETKAMGEMAVTAACSPSLMTVSVAPHQVYGPRDNLFMPNILEAAGTGVLRIFSARRTGYGMNKVCFTHVDNYCHGLMCAEKALFKNSPALGKFYIVTDGRTHPSPLGYAHFWQVLDEPIKAMGFPSIWSKFKLPVWLLMPIAHICDFIGWLTGRKLKLNPFNVRVLTMHRWFDISVAERDLKFTPIISFTDGWRDTADYFKEHWLPRF 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16972.4326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16972.4326.1 >prot_H-elongata_contig16972.4326.1 ID=prot_H-elongata_contig16972.4326.1|Name=mRNA_H-elongata_contig16972.4326.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp MSSSPSTRFDGGNIDGLKESDLKIPDTFLELYAESKEKGETAVLDACSDKback to top mRNA from alignment at H-elongata_contig16972:3..2642+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16972.4326.1 ID=mRNA_H-elongata_contig16972.4326.1|Name=mRNA_H-elongata_contig16972.4326.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2640bp|location=Sequence derived from alignment at H-elongata_contig16972:3..2642+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16972:3..2642+ >mRNA_H-elongata_contig16972.4326.1 ID=mRNA_H-elongata_contig16972.4326.1|Name=mRNA_H-elongata_contig16972.4326.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig16972:3..2642+ (Himanthalia elongata Himel1 dioecious)back to top |