mRNA_H-elongata_contig16878.4281.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16878.4281.1
Unique NamemRNA_H-elongata_contig16878.4281.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0
Identity = 511/786 (65.01%), Postives = 606/786 (77.10%), Query Frame = 1
Query:    1 YDDDCVVETYFCEKDNRLARIEVVLDEATNTVTCGTQVILINDWCTGSNHHGGGGMDFFENGDMALAVGDMSKADQVDAGDQEENTCLVEGVALPQGNFRAQLEDFNEGKLLRISADALVAEAPDTADTTGFLVRGEDFWLEAKGFRNPFRLVILPGSGNVVVADVGLNTAESFKVVPNPLEAEEGAAMGNYGWPCMEGNAWIPTDTNTWLVENKNDACDGVRGTTLGLPLEIDYDDLMDQALAGEVDWVPASYTYSSEIIDSEYPDTCASTLHSVSALHIYQGGNLPDRYSNAMLVGDYSKDCVFYFDVDAEAGTVDWTAPHVLFESRSIVDFNTDPKTGILYAIDAKISVLIKILGVGGTIGAVSTSPTVSTVPDVVLQADVTNGTVPLEVTLDASASSDSDGIVTVQWDCEGDGIFEAEGNWTAQTSKTHICTYDVDGAYQATVKTTNSLNASASDYVDILAGEAVASTMSPTPAPVAVTDSPLFTPAPVTXXXXXXXXXXXT-SPPELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQNSSD-CEMNLLAKDGVYLGEVPRVEAKLFFTPSSRL 2352
            Y DDC+VE ++CEKD RLAR+EV L+EAT +VTCG Q ILINDWCTGSNHHGGGGM F  NGDM L VGDMSKADQ D GDQEENTCL E   LPQGNFRAQ +DFNEGKLLRIS+DALVAEA   A TTGFLVR  DFWLEAKGFRNPFRL + P SG+V++ADVGL++AES KVVPNPLEA E  +M NYGWPC+EG+AWIP     WL +N++DACD VR TTLGLPLEIDYD L  +ALAG+VDWVP +Y Y    ID EYP+ CA+T  SVSALH+Y+GG+LP+RY N + VGDYSKDC FYFD+D   G VDW  PHVLFE+R+IVDF TDPKTGI+YAIDAK S+LIKI+ + G        P  S  P +VL+AD   G +PL+VT+DAS SSD++GIV ++WDCEGDG+FEAE +WT  +++ H CTY VDG Y+ +V+ TN L+ +A   +++LAGE  A      PAP               XXXX         SP EL+WE+++ATGV  GE+E G V +DNFWG TTTR +NGQIPGPTIRMEAC++Y LT  N L   NPGG WNTMKDPN+TN+HTHGLHISGESPADDVL+VE+ PGE HT+VYTIPCDHAGGTFWYHPHHHGST+LQ GGGAMG L++EDR DVHGIPDQ ++MPELV+ IQ     EM PEL  AD DA+G EL++TTA   HYLVNG V+P+I +  G+W+RLR++FAG GD+HAIS++   D CEM +LAKDGVYLGEVPR+E KLFFTPSSR+
Sbjct:  144 YGDDCLVEPFWCEKDQRLARVEVNLNEATQSVTCGAQEILINDWCTGSNHHGGGGMSFLSNGDMVLTVGDMSKADQRDPGDQEENTCLREDRGLPQGNFRAQFDDFNEGKLLRISSDALVAEATADASTTGFLVRDTDFWLEAKGFRNPFRLAVSPVSGDVIIADVGLDSAESIKVVPNPLEAAETVSMPNYGWPCIEGDAWIPPYAAEWLADNESDACDDVRDTTLGLPLEIDYDALKTKALAGQVDWVPPAYVYLDGTIDEEYPEFCANTQSSVSALHVYEGGHLPERYHNRLFVGDYSKDCAFYFDIDETTGVVDWATPHVLFENRAIVDFATDPKTGIMYAIDAKFSILIKIMAIDG--------PLTSGGPTIVLEADALEGPLPLDVTIDASGSSDAEGIVLLEWDCEGDGVFEAESDWTVASARNHTCTYTVDGTYEPSVRATNGLDETAVKSLEVLAGEVAA------PAPTXXXXXXXXXXXXXXXXXXAPPVGDALESPVELEWELNDATGVFMGEIEMGAVTIDNFWGVTTTRAFNGQIPGPTIRMEACQTYELTYTNNLGPLNPGGAWNTMKDPNTTNLHTHGLHISGESPADDVLYVEITPGESHTFVYTIPCDHAGGTFWYHPHHHGSTSLQMGGGAMGALVVEDRVDVHGIPDQIANMPELVMVIQ-----EMNPELSTADSDASGDELYSTTAAQTHYLVNGQVMPTIQMTTGEWVRLRMAFAGHGDNHAISIEAPEDSCEMAVLAKDGVYLGEVPRMEPKLFFTPSSRV 910          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A836CK08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK08_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.790e-70
Identity = 239/825 (28.97%), Postives = 338/825 (40.97%), Query Frame = 1
Query:   34 CEKDNRLARIEVVLDEATNTVTCGTQVILINDWCTGSNHHGGGGMDFFENGDMALAVGDMSKADQVDAGDQEENTCLVEGVALPQGNFRAQLEDFNEGKLLRISADALVAEAPDTADTTGFLVRGEDFWLEAKGFRNPFRLVILPGSGNVVVADVGLN---TAESFKVVPNPLEAEEGAAMGNYGWPCMEG-------------NAW-IPTDTNT--WLVENKNDACDGVRGTTLGLPLEIDYDDLMDQALA--------GEVDWVPASYTYSSEIIDSEYPDTCASTLHSVSALHIY--QGGN------LPDRYSNAMLVGDYSKDCVFYFDVDAEAGTVDWTAP-HVLFESRSIVDFNTDPKTGILYAIDAKISVLIKILGVGGTIGAVSTSPTVSTVPDVVLQADVTNGTVPLEVTLDASASSDSDGIVTVQWDCEGDGIFEAEGNWTAQTSKTHICTYDVDGAYQATVKTTNSLNASASDYVDILAGEAVASTMSPTPAPVAVTDSPLFTPAPVTXXXXXXXXXXXTSPPELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLT---MPNP----GGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMV-VPS-IDLEAGKWLRLRISFAGQGDDHAISLQNSSD----CEMNLLAKDGVYLGEVPRV--EAKLFFTPSSRL 2352
            CE    L R+ V L+  T T     +V L+   C  S+ HG G +     GD+ ++VGD S+  ++D G   +  C V G    QG FRAQ EDF  GK+ RI A  L A A    + T  +         A G R PFR+        + + D G     T E    + +        A+ NYGWPC+EG               W  P++     +L +     CDG++              L  QALA         ++ W P +Y Y    +D  +PD C   L +++++ I    G N      LP  Y+  ++  D+ K C ++FD D   G  D + P HV+  +  +VD    P     Y ID   + L+++  +                                      +A++  D I                    A+T K                                        T +P P P A T                       + PELQW   N  G   G L   VV L+   G   TR +NG IPGP +RM+ C +Y+LT+KN L     P P        N++ DP  TNVH HGLH+SGE+P DDV  V + PG+   Y YTIPCDHA GT WYHPHHHGS ALQTGGGA G+L++E    +  G P + + +PE  V IQ     E+ P               +        +VNG    P+ + +EAG+W +L I   G   +   +L  ++D    C++ LL KDG  + + PR   + KLF + SSR+
Sbjct:  119 CEHPYYLDRVAVDLEAGTMT----KEVTLLQVACGSSSSHGPGTV-LSIGGDLLVSVGDGSQYAELDPGFDVDG-CYVPGAGDDQGVFRAQREDFGNGKVHRIPAALLNAPAAIALEATSPV---------AIGLRQPFRMFYHAPGDTLWIGDTGFGDGGTTERIYGLNDASAPVLSTAVPNYGWPCIEGVFANTADALAGKYTLWDTPSEQERLRYLEDRGLTRCDGIK--------------LAAQALADGTAPPDDADLMWRPPTYEYRVGALDPNHPDDCGGGLAAITSVFISATNGANNSSSSGLPADYTGKLIFADHVKQCTWFFDADPATGAPDTSVPPHVITANLGLVDIVAGPGGTGAYGIDFANARLVRMASL-------------------------------------TAAAAPRDAIAAPIGXXXXXXXXXXXXXXAAKTVKP---------------------------------------TKTPKPIPAAKT------------------CRNPRNFPELQW-TRNDDGSYEGTLTLDVVMLETERGAVRTRAWNGMIPGPLMRMQPCGTYHLTVKNALKGWPAPPPRIAAAAQLNSVHDPLVTNVHVHGLHVSGEAPGDDVFGV-IEPGDAAMYTYTIPCDHASGTNWYHPHHHGSVALQTGGGAAGMLVIEPSAREALGTPAEIAALPEQFVVIQ-----EIDPAXXXXXXXXXXXXXXDVPPL---LMVNGCADAPAQMRVEAGQWTKLHILNVGVAYNAVATLVAAADGVAACDVVLLGKDGAPVADAPRALPDRKLFLSVSSRV 810          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835ZH56_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH56_9STRA)

HSP 1 Score: 238 bits (607), Expect = 7.420e-63
Identity = 194/666 (29.13%), Postives = 278/666 (41.74%), Query Frame = 1
Query:  487 VADVGLN---TAESFKVVPNPLEAEEGAAMG-NYGWPCMEG----------NAWIPTDTNT------WLVENKNDACDGVRGTTLGLPLEIDYDDLMDQALAGEVDWVPASYTYSSEIIDSEYPDTCASTLHSVSALHIYQGGNLPDRYSNAMLVGDYSKDCVFYFDVDAEAGTVDWTAP----HVLFESRSIVDFNTDPKTGILYAIDAKISVLIKILGVGGTIGAVSTSPTVSTVPDVVLQADVTNGTVPLEVTLDASASSDSDGIVTVQWDCEGDGIFEAEGNWTAQTSKTHICTYDVDGAYQATVKTTNSLNASASDYVDILAGEAVASTMSPTPAPVAVTDSPLFTPAPVTXXXXXXXXXXXTSPPELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLT-MPN---PGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDL--EAGKWLRLRISFAGQGDDHAISLQNS-----------SDCEMNLLAKDGVYLGEVPRV--EAKLFFTPSSRL 2352
            + DVG     T E   V  +  +   G     N+GWPC+EG            + P DT++      ++  N  D CDGV           DY          +  W    + Y   ++D +YP  C  +  +++++H+Y+G ++P  Y+  +++ DY+K CV+YFD   + GT +  AP    HVL      VD    P  G LY +D   + ++++                                        A     S G+         DG  E                                                        P  V V D   F P                + PE QW    A G  +G LEFG VE+    G   T GYNG  PGP +RM+AC  Y+LTLKN L   P    P    N   DP  TN+H HG+HISG +P DDV F  +  GE+  YVYT+PCDH GGT WYHPHHHG  ALQ+G GAMG+LI+E  P +   +P +   MPE  + IQ     E+ P  ++   DAA  +LF T       LVNG     +++  EAG+W+R+ I       + A++++ +           + C++ LL KDGV++ + PR   +  +F + SSRL
Sbjct:   12 ITDVGFGDGGTTERLFVATDVSKHVPGVTQPFNWGWPCIEGLFSTVDDEVAGNFNPLDTDSEQQRQAYVRTNNLDVCDGVYNAVQ------DYVAGDAPGPLSDATWRAPVFEYRVGLLDPDYPGLCTYSNAAITSVHVYEGADMPAAYTGKLIIADYAKQCVWYFD--NKPGTKEPDAPGSYPHVLLAGTGCVDTAEGPD-GALYCVDLLNNRILRMY---------------------------------------AKGEGPSKGL---------DGPTEPXXXXXXXXXXXX-------------------------------------------PDNVVVADQ-CFDPK---------------NMPEFQW-ARQADGSYAGVLEFGAVEIATATGTMRTVGYNGLQPGPIMRMQACGVYHLTLKNTLEGWPEGIGPEAGVNGEHDPTVTNIHLHGMHISGMAPGDDV-FAAIAAGEEQEYVYTVPCDHTGGTNWYHPHHHGIVALQSGTGAMGMLIVESNPREAQDMPPEIQMMPEQFIVIQ-----EIDPIALQTYADAAKDQLFQTDIAQAFTLVNGCDAGDVEMTVEAGQWVRVHILNHANAFNSALTIKAAVAGAAPAAPAAAQCDVLLLGKDGVWVADAPRAVPDNNMFVSISSRL 554          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835Z3E9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E9_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.990e-60
Identity = 130/282 (46.10%), Postives = 168/282 (59.57%), Query Frame = 1
Query: 1531 LQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLT-MPNPGGDW-NTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGI---PDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQNSSD---CEMNLLAKDGVYLGEVPRVEAKLFFTPSSRL 2352
            L W   NA G  S  LEFG ++  N +G T TRGYNG IPGP +R++AC+ Y LTLKN L+   +P     N   +P++TN+HTHGLH+SG   AD+VL  EV  GE   Y Y IPCDHAGGT +YH HHHG   LQ GGGA+G+L ++D P    I   P  Y  MP   V +Q      + P+ ++    A G +LF TTAT++HYL NG    ++ +  GKW RLR+   G+ D+  +S+QN      C M LLAKDGVY      V   LFF+ SSR+
Sbjct:  684 LAWTT-NADGTLSATLEFGAIQFTNKYGTTRTRGYNGGIPGPLMRLQACKVYKLTLKNTLSGWADPTSPTLNQFTNPSTTNLHTHGLHVSGMGNADNVLR-EVARGESAVYTYAIPCDHAGGTHFYHAHHHGGVTLQAGGGAVGLLRVDDNPTFEAIASRPAIYGSMPTRYVVLQY-----VDPDTLQTTAAAMGDDLFYTTATAKHYLTNGCDDYTMSITLGKWTRLRMLHVGRLDNALVSIQNQGGGDPCIMALLAKDGVYDSAPGTVYTNLFFSISSRV 958          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835YZ52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ52_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.890e-55
Identity = 126/300 (42.00%), Postives = 165/300 (55.00%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKN-MLTMPNPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGI---PDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGE----------------LFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQNSSD---CEMNLLAKDGVYLGEVPRV-EAKLFFTPSSRL 2352
            PEL+W      GV    L  G V+  N WG T TRGYNG +P P +R+ AC  Y LTL+N      NPGG  N  ++P +TN+HTHGLH+SG   ADD  + EV PG++  Y Y IPCDHAGGT +YHPHHHGS  L  G GA+G+L ++D P +      P  Y  MP+  +A Q   F +  P  ++A  D  G +                LF TTA  +HYL NG    +  +  GKW RLR+   G G D  +SL        C++ +LAKDG+Y   V RV  A+ +F+ SSR+
Sbjct:  575 PELKW-TQGKDGVFRATLTLGAVQFANKWGTTRTRGYNGGVPAPLMRLRACGVYKLTLRNAQQKWGNPGGALNDFREPATTNLHTHGLHVSGIGNADDT-YREVLPGKETVYTYAIPCDHAGGTHFYHPHHHGSVFLSAGAGAVGMLRVDDNPTLEANARRPAIYGRMPQRYLAFQ---FFD--PSRLKALADGMGDQARHPAAPLRLNALAKGLFYTTAKRKHYLTNGCTGYTNSITIGKWTRLRMLHIGHGADAVVSLVREGGGKTCKVAMLAKDGIYSDTVGRVVPAQFYFSVSSRV 867          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A836CIZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 6.800e-51
Identity = 110/273 (40.29%), Postives = 158/273 (57.88%), Query Frame = 1
Query: 1558 GVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMP--NPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHG-IPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISL----QNSSDCEMNLLAKDGVYLGEVPRVEA--KLFFTPSSR 2349
            G +   L F VVE  N +G T TR +N  +  PTIRM+AC  Y +TL N L     +P G  NT++DP  TN+H HGLHISG    D+V+ V++ PG  H Y Y IPCDHA G  +YH HHHGS ++Q GGGA+G++++ED P   G +P   + MPE  + I+      + PE +          ++ +TAT  HYL+N     S+   AG+W RLR+   G   +  + +     +++ C + L+AKDGVY+  VPR  A  ++FF+ +SR
Sbjct:  577 GYKCANLSFDVVEYTNSYGTTRTRAFN--LYNPTIRMKACGKYLITLTNDLAAGWGDPTGAINTLRDPQRTNLHVHGLHISGNGAVDNVVDVQLSPGGGHLYKYEIPCDHASGLHFYHTHHHGSASVQAGGGAVGLIVIEDNPQFEGTLPGWLNGMPERHLLIEV-----VEPEAVRGYAKDMSDTVYTSTATKDHYLINKCTSVSVTAPAGRWTRLRMLHVGGALNAKMRIGGGGSSAAACAVGLVAKDGVYVSHVPRALATREVFFSVASR 842          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.140e-50
Identity = 126/303 (41.58%), Postives = 168/303 (55.45%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTT-TRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPG----GDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVHGI-PDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVP---------------SIDLEAGKWLRLRISFAGQGDDHAISLQ----NSSDCEMNLLAKDGVYLGEVPRVEA--KLFFTPSSRL 2352
            PEL W    A G  + +L  GVV L    G T  TR +NG IPGP IRM+AC+ Y LT++N L     G    G  N    P  TN+HTHGLHISGESPAD+  FV + PG+++TY Y IPCDH GG  WYHPH HG+ ALQT GGA G++++E       + P     MPE  + IQ     E+ P  ++A    +G  +F++  T+   LVNG   P               +I++EAG+W RLR+   G   +  I+++    N   C++ LLAKDGV L + PR  A   LF + S+RL
Sbjct:  388 PELGW-THQADGTFTADLTLGVVTLTTADGGTLRTRAWNGLIPGPIIRMKACQVYYLTVRNDLGAWPEGKPETGVMNGFHGPTVTNIHTHGLHISGESPADNP-FVSILPGQEYTYQYRIPCDHIGGLHWYHPHKHGAVALQTHGGAAGLIVIEPMAREASVTPAAIQTMPEQYLMIQ-----EIDPPGLQAFATQSGDRIFDSDITAAFTLVNGCSAPGAGVVVKPAMTTALANINVEAGQWTRLRLLNVGHQYNSIITIEPKVLNGVPCQLGLLAKDGVPLADAPRAVAGNALFVSLSTRL 683          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835Z524_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z524_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.100e-50
Identity = 122/311 (39.23%), Postives = 160/311 (51.45%), Query Frame = 1
Query: 1531 LQWEVDNATGVRSGELEFGVVELDNFWGKTTTRG---------------------------YNGQIPGPTIRMEACRSYNLTLKNMLT-MPNPGGDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRPDVH---GIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQ----NSSDCEMNLLAKDGVYLGEVPRV--EAKLFFTPSSRL 2352
            L W    A GV    L+F  ++  N  G T TRG                           YNG IPGP IRM+AC++Y +TL+N L    N  G  NTM  P +TN+HTHGLHISG   AD+V   E+ PG      Y IPCDHAGGT +YHPHHHGS  LQ  GGA G+L ++D P        P  Y  MP   +     +F  ++P  +     A   +LF +TAT RHYL NG    +  +  GKW RLR+   G+ D+   S+         C++ L+AKDGVY  E  R+  + ++FF+ SSR+
Sbjct:  572 LAW-TQGADGVLRARLDFEPIQFTNKQGTTRTRGRRRTXXXXXXXXXXXXXXXXXXXXXXXYNGHIPGPIIRMQACKTYQITLRNGLAGWANVPGAENTMHSPQTTNLHTHGLHISGMGTADNVAR-EMLPGSDTVITYAIPCDHAGGTHFYHPHHHGSVTLQAFGGAAGILQIDDNPAFEIGDHRPAIYGQMPNKYL-----IFQYVHPAFLNERASAMKDDLFASTATERHYLTNGCADYTTGVTLGKWTRLRMLHIGRKDNAIASITARDGGKGACKVALIAKDGVYDNEAGRILADGRVFFSISSRV 875          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835Z7H4_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H4_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.010e-49
Identity = 118/291 (40.55%), Postives = 161/291 (55.33%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPG--GDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYP----ELIEADRDAAGGELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQ-----NSSDCEMNLLAKDGVYLGEVPR---VEAKLFFTPSSRL 2352
            PEL W  ++  G    +L FG  E    +    TR YNG +PGP IRM+ACR+Y +T+ NML     G  G  +   DP  TN+H HGLH+SG++P+DDVL V ++PG   TY Y IPCDHAGGT WYHPH  GSTALQ  GGA G++I+E    +    P  Y  +PE ++ +Q     E+ P    EL E +  AA  +L   T  +R    NGM V    +EA  W R+RI       +  +++        + C + LLAKDGV++  +PR    E  +F + SSR+
Sbjct:    2 PELPWVRNDYAGTYDADLFFGAGEEGTPYVLIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPVGKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVLTVNIQPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQ-----EIVPYGANELAE-NAAAAEDQLLTVTTNTRASYWNGMTVK---VEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASLPRSVPAEQSIFLSLSSRV 283          
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Match: A0A835YUJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ5_9STRA)

HSP 1 Score: 192 bits (489), Expect = 7.050e-48
Identity = 113/280 (40.36%), Postives = 156/280 (55.71%), Query Frame = 1
Query: 1525 PELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIPGPTIRMEACRSYNLTLKNMLTMPNPG------GDWNTMKDPNSTNVHTHGLHISGESPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGAMGVLIMEDRP-DVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAGGELFNTTATSRHY-LVNGM----VVPSIDLEAGKWLRLRISFAGQGDDHAISL----QNSSDCEMNLLAKDGVYLGEVPRV 2316
            PEL+W  + A G  SG LE   VE+    G   TRG+NG +PGP IRM+AC +Y L L N       G      G  N   DP  TN+H HGLHISG +P D +  + +  GE + Y YTIPC+HA GTFWYHPH HGSTALQ  GGA G+LI+E  P +    P  Y+ MPE ++ +Q     ++  +L+      +G  LF+ +   + + +VNG         + L AG+W +LR+   G   +  +S+      +  C++ LLAKDGV+L + PRV
Sbjct:  298 PELEW-TEQADGSFSGTLELSAVEMVKGGGTIVTRGFNGMVPGPVIRMQACNTYKLRLVNDQAGWPAGLNADQIGGVNGFHDPTVTNLHLHGLHISGMAPGDSMDTL-LEAGEMNVYTYTIPCEHASGTFWYHPHGHGSTALQADGGAAGMLIVEGAPRESAKFPPAYNAMPEQLLVVQ-----DINTDLLGRLAGYSGDSLFSKSPMMKPFTMVNGCDPADAPADVALAAGQWTKLRMLNVGTQYNSVLSIVPAVPAADPCDVQLLAKDGVWLSDAPRV 570          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16878.4281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE0.000e+065.01PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CK08_9STRA1.790e-7028.97Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZH56_9STRA7.420e-6329.13CBM6 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z3E9_9STRA1.990e-6046.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ52_9STRA2.890e-5542.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CIZ3_9STRA6.800e-5140.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCB5_9STRA3.140e-5041.58CBM6 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z524_9STRA4.100e-5039.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7H4_9STRA1.010e-4940.55Uncharacterized protein (Fragment) n=2 Tax=Tribone... [more]
A0A835YUJ5_9STRA7.050e-4840.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16878contigH-elongata_contig16878:322..7145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score156.4
Seed ortholog evalue5.6e-35
Seed eggNOG ortholog41875.XP_007514690.1
EggNOG free text desc.Multicopper oxidase
EggNOG OGs2RBNT@2759,34MP1@3041,3841T@33090,COG2132@1
COG Functional cat.Q
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons13
Model size2352
Cds size2352
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929985.4721205-CDS-H-elongata_contig16878:321..5401622929985.4721205-CDS-H-elongata_contig16878:321..540Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 322..540 +
1691679235.255526-CDS-H-elongata_contig16878:321..5401691679235.255526-CDS-H-elongata_contig16878:321..540Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 322..540 +
1622929985.4849617-CDS-H-elongata_contig16878:886..10871622929985.4849617-CDS-H-elongata_contig16878:886..1087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 887..1087 +
1691679235.2708032-CDS-H-elongata_contig16878:886..10871691679235.2708032-CDS-H-elongata_contig16878:886..1087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 887..1087 +
1622929985.5008545-CDS-H-elongata_contig16878:1371..15771622929985.5008545-CDS-H-elongata_contig16878:1371..1577Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 1372..1577 +
1691679235.2790022-CDS-H-elongata_contig16878:1371..15771691679235.2790022-CDS-H-elongata_contig16878:1371..1577Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 1372..1577 +
1622929985.5208526-CDS-H-elongata_contig16878:2095..22441622929985.5208526-CDS-H-elongata_contig16878:2095..2244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 2096..2244 +
1691679235.287058-CDS-H-elongata_contig16878:2095..22441691679235.287058-CDS-H-elongata_contig16878:2095..2244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 2096..2244 +
1622929985.537544-CDS-H-elongata_contig16878:2830..29611622929985.537544-CDS-H-elongata_contig16878:2830..2961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 2831..2961 +
1691679235.2954636-CDS-H-elongata_contig16878:2830..29611691679235.2954636-CDS-H-elongata_contig16878:2830..2961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 2831..2961 +
1622929985.5728881-CDS-H-elongata_contig16878:3320..34351622929985.5728881-CDS-H-elongata_contig16878:3320..3435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 3321..3435 +
1691679235.3059216-CDS-H-elongata_contig16878:3320..34351691679235.3059216-CDS-H-elongata_contig16878:3320..3435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 3321..3435 +
1622929985.620289-CDS-H-elongata_contig16878:3657..38001622929985.620289-CDS-H-elongata_contig16878:3657..3800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 3658..3800 +
1691679235.315844-CDS-H-elongata_contig16878:3657..38001691679235.315844-CDS-H-elongata_contig16878:3657..3800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 3658..3800 +
1622929985.6400857-CDS-H-elongata_contig16878:4223..44181622929985.6400857-CDS-H-elongata_contig16878:4223..4418Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 4224..4418 +
1691679235.3240085-CDS-H-elongata_contig16878:4223..44181691679235.3240085-CDS-H-elongata_contig16878:4223..4418Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 4224..4418 +
1622929985.6572816-CDS-H-elongata_contig16878:4614..48991622929985.6572816-CDS-H-elongata_contig16878:4614..4899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 4615..4899 +
1691679235.3331318-CDS-H-elongata_contig16878:4614..48991691679235.3331318-CDS-H-elongata_contig16878:4614..4899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 4615..4899 +
1622929986.0546453-CDS-H-elongata_contig16878:5345..55561622929986.0546453-CDS-H-elongata_contig16878:5345..5556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 5346..5556 +
1691679235.3439186-CDS-H-elongata_contig16878:5345..55561691679235.3439186-CDS-H-elongata_contig16878:5345..5556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 5346..5556 +
1622929986.0777133-CDS-H-elongata_contig16878:6007..62071622929986.0777133-CDS-H-elongata_contig16878:6007..6207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 6008..6207 +
1691679235.3589375-CDS-H-elongata_contig16878:6007..62071691679235.3589375-CDS-H-elongata_contig16878:6007..6207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 6008..6207 +
1622929986.0922217-CDS-H-elongata_contig16878:6413..64901622929986.0922217-CDS-H-elongata_contig16878:6413..6490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 6414..6490 +
1691679235.3707662-CDS-H-elongata_contig16878:6413..64901691679235.3707662-CDS-H-elongata_contig16878:6413..6490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 6414..6490 +
1622929986.2994611-CDS-H-elongata_contig16878:6925..71451622929986.2994611-CDS-H-elongata_contig16878:6925..7145Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 6926..7145 +
1691679235.380756-CDS-H-elongata_contig16878:6925..71451691679235.380756-CDS-H-elongata_contig16878:6925..7145Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16878 6926..7145 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16878.4281.1prot_H-elongata_contig16878.4281.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16878 322..7145 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16878.4281.1

>prot_H-elongata_contig16878.4281.1 ID=prot_H-elongata_contig16878.4281.1|Name=mRNA_H-elongata_contig16878.4281.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=784bp
YDDDCVVETYFCEKDNRLARIEVVLDEATNTVTCGTQVILINDWCTGSNH
HGGGGMDFFENGDMALAVGDMSKADQVDAGDQEENTCLVEGVALPQGNFR
AQLEDFNEGKLLRISADALVAEAPDTADTTGFLVRGEDFWLEAKGFRNPF
RLVILPGSGNVVVADVGLNTAESFKVVPNPLEAEEGAAMGNYGWPCMEGN
AWIPTDTNTWLVENKNDACDGVRGTTLGLPLEIDYDDLMDQALAGEVDWV
PASYTYSSEIIDSEYPDTCASTLHSVSALHIYQGGNLPDRYSNAMLVGDY
SKDCVFYFDVDAEAGTVDWTAPHVLFESRSIVDFNTDPKTGILYAIDAKI
SVLIKILGVGGTIGAVSTSPTVSTVPDVVLQADVTNGTVPLEVTLDASAS
SDSDGIVTVQWDCEGDGIFEAEGNWTAQTSKTHICTYDVDGAYQATVKTT
NSLNASASDYVDILAGEAVASTMSPTPAPVAVTDSPLFTPAPVTAPVAAP
VGEPLTSPPELQWEVDNATGVRSGELEFGVVELDNFWGKTTTRGYNGQIP
GPTIRMEACRSYNLTLKNMLTMPNPGGDWNTMKDPNSTNVHTHGLHISGE
SPADDVLFVEVRPGEQHTYVYTIPCDHAGGTFWYHPHHHGSTALQTGGGA
MGVLIMEDRPDVHGIPDQYSDMPELVVAIQASLFSEMYPELIEADRDAAG
GELFNTTATSRHYLVNGMVVPSIDLEAGKWLRLRISFAGQGDDHAISLQN
SSDCEMNLLAKDGVYLGEVPRVEAKLFFTPSSRL
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mRNA from alignment at H-elongata_contig16878:322..7145+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16878.4281.1 ID=mRNA_H-elongata_contig16878.4281.1|Name=mRNA_H-elongata_contig16878.4281.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6824bp|location=Sequence derived from alignment at H-elongata_contig16878:322..7145+ (Himanthalia elongata Himel1 dioecious)
TACGACGATGATTGCGTGGTGGAGACTTACTTCTGTGAGAAGGACAACCG GCTGGCTCGCATCGAAGTGGTTCTCGACGAGGCCACCAACACCGTCACCT GCGGCACGCAAGTAATACTAATCAACGACTGGTGCACCGGTTCCAACCAC CACGGAGGCGGCGGCATGGACTTCTTTGAAAATGGCGATATGGCGCTCGC CGTAGGAGACATGTCCAAGGTACTGTATACCTGTAGTGGGTCGGAGCTCT GTGCGAGCAGCAGACAGCTGAACTGCACTCCTCTTATGAGTGTTTTTGGA ATTGAGTTCATATGATTTTTCAGAATAATAGTCACATGAAAATAGATCCA ATCAATGATCGAGCATCCTATTATTATATATTAATAGTCGCAGTGGTTGT GGTGAATGAAAGACAAGACAAGGCGGCAGAAAAGGCGGCATTTCACGTCT TCTCCCGCGCCTCAACACTACGCTAGCTAGCTAACTCATTCGTCGTTTTT TTTTCGTACGCTGTCTGTTCGTTGTTTATTTTCCCCCACGTTGTTAATAT GCCGATGGCCCTCAGGCGGATCAGGTCGACGCCGGTGACCAGGAAGAAAA CACGTGCCTAGTGGAGGGTGTGGCCCTACCACAGGGAAATTTTCGTGCAC AGCTAGAAGACTTCAATGAGGGCAAGCTGTTGCGGATTTCCGCCGATGCC CTCGTGGCGGAGGCTCCCGACACTGCGGACACTACTGGGTTCCTAGTCCG AGGCGAGGATTTCTGGGTGAGAGCTTCAACGATGATAACTCCGCATGGAA AGTGTTAGAACTATTAATCGAGTCAGACCCGAGTGCAATACAATACAGTA CAGTACATTACATTAATTCAAGGTGCGGAGGTAGCCGTTACACTATTATA AATATTTATATATTGAAGATTATGTTATATGGGGGCGATAGCAACATGCT CTACAATTGTTTGAAGGGTCTACATTATATTTTTTCCTAGACCATACACC GCTTCCTTCGAACCAACGCCCATCTCCGCGCCGATTCTCCCTTGAATCAG CTCGAGGCCAAGGGCTTCCGCAACCCGTTCCGCTTGGTGATTCTGCCGGG CTCTGGCAACGTTGTCGTTGCCGACGTGGGGCTAAACACTGCGGAGAGTT TCAAGGTAGTACCCAACCCGCTCGAAGCGGAGGAGGGCGCGGCGATGGGG AACTACGGCTGGCCATGCATGGAGGGTAACGCGTGGATACCGACCGACAC GAACACGTGGGTTTTTTGTTACGAAACAATGAGAGGCGATCTCACCCACC GCTGTCGTGAGCGCGGTTCTGTGGAGTATCCTCACCCACTAGTGTTATTT TGTTATGTTTGTAGGACTTCATTGTCGAGCTAGCGCTCGCTCTCGAAAAA TAAAGATTGGACGCTTTTGAGGATTTTTCTCCCCCAACGTCCTTTTTTCC CTTTTTTATTTATTTTAAAACCTTGAACTTAATCCAACCCTCCGAACATC CACACCTTTTTATTTGCGCTTCAATTAAAATGTTGTTGATTTTTCTCACT CGTGATGCACTTTGACAACTCCAAACCCGAATTAGTTTCTTCTGAATCGC GAAATGGAGAAAAAACACAACAGCGCCACGCACAAAAAACAACTAAAGGC TGTGTGAAAGGACAGTGTTAAATACTATATAATACAATTAGAGACGAGCG GATGTCGTCTATTCTACTGCAAATATTGTTATCGATTCACAGCATTTACC CTTGTATCGCGATGCTCCCGATAGGTGGCTCGTCGAGAATAAGAACGACG CATGCGATGGCGTGCGAGGCACAACACTTGGCCTCCCATTAGAGATCGAC TACGACGACCTCATGGATCAAGCTCTAGCAGGAGAGGTGGACTGGGTGCC CGCGTCCTATACCTATAGCTCAGGTAACATTACCGTTGCGATGCCTCACG ATGCCGTAAAAACTGTTGCATTGCCATAGATTGCCTCTTCCCGGCATACC ACAAAATACCCACGGTAAATGTGACTGATTCTGACCGCAAGAGCCAACAG CCGCAGGATTGCGGGCAATCCATCTCCCCCGTCCCTCCCCGCCGGTCAGT AATCTAGGAAACTTTGTGGCTTGCAATCGACAATCAACGACCACGAAATA TTCTATCGTCACGTCATTACGCAAGATTTGGTAGATGTTATTGTATAGAA TATATGTCGTTTTATTTTGGTAGGGGGGAGGGGGGTCACGGTCAAGAACC TTCCGAGCGCGGTAACGCTTGCTTTAGTGGAAGCGCTACGGCGTTTATAG CGTATCCCAGCCAAACAATATTTCCTAGGGTTTTTGATGCGAAGGGGAAG GCATGTAATGAGTTTCCTCCACCCACTGTTACACAGTATCGTACATAATA TATATATATATATATATATATATATAGTACAGCTGTAGTGTTTTTCTTGA ATGTCTAAATATTGAAATTGCGGCGTGCTATCCCCCACTGCGTGATCTGA CTTAATCAGAAATCATCGACTCCGAGTATCCAGACACATGCGCCAGCACT CTGCATTCAGTGTCAGCTCTCCACATCTACCAGGGGGGAAATCTGCCCGA TCGATACTCCAACGCGATGCTTGTAGGCGACTATTCAAAGGTACCGACGG CGCTCGGGTCATGCAGGAGTGATCAGCCTTCCTTGTCTTGCTTGACTGAA ATAAAGATAGCCATAACCATCCCTCCCATCATGTATATTAACACGCCTAC TCCCTCGTCAAACCGCATTTTGATTTTTTTGAGAGCCCCCTACGGCAGCA AGAGACGGGTCGAAAGATTGTTTGATGCCTAGGCATTCAAAATCTATAAA ACGTAGCCTGGTTTGCAACCAATATTCTGAGACGGAGATGAACACGCAAC CTTGAAAGCGATCGCTACCATCCCCCCTTCTTCACGCGATCCAAATACTT CTCTTTTTGTTTTTTACGTTTTTCACATGCAAAAATACATGGGTGATAGG ATTGCGTGTTCTATTTCGACGTGGACGCCGAGGCCGGAACGGTGGACTGG ACTGCCCCCCACGTGCTGTTTGAATCGCGCTCCATCGTAGACTTCAATAC TGATCCAAAGACTGGTGGGTTGCCTGCTATACGCATTAATGCATGCTGGT GCTGGTCCTGGTCCTGGTAGTGATCACTGCGCTATGTACCATGTACCCGC GTTTATCACGAACGCTCTGAAACAAGTTGGAAAACCCAACCAAACAATTT TCGCGTCTACCTGGCAACCCTTAGCCCCGGTTGTTTCATAAACAATGTTA ACGTGATCCATACGTTGGGTGTATGGCACGCGGCAGGTATATTGTATGCC ATCGATGCGAAGATCTCCGTCCTCATCAAGATCCTCGGAGTTGGCGGCAC GATCGGCGCCGTTTCGACTAGTCCGACCGTTTCGACTGTTCCGGACGTGG TGCTCCAGGCTGACGTTACTAATGGCACGGTGCGAAAATATTTGCTGGGG TGTCTGGAGAGACTTCCTTCGCGCAGCGTGATCGAATCGAGTAAAACAGC CAAAGGTAGACAAAAACTACTAATAGTTTACTTTTTACTATTAATATCTG ATTTACGACAGAGGAAGATTTCCAGTCTGAAACATCAAGAGCAAGTTGAT GTCGACGTCTCCTGGGGGGTACATCTTGTAACATGCAGTGGTAGCATAGA GTGGTCAACAAGAGATGCCGTAAAGAAGACGCCTTGAGGTTTGACCGTCG ACCTCGGGGTCACGAATCTCGCCGCTCATCTCTCGTGACGACCAACTCAA CTCCCTCACCATTTCTCCCTTTAGTTGAAAGTGTACACAAGGCCCCCTTA AATATATCGAAATTGACACCCATCACCCCAAATATCCCCTTTTTCCTTAC AGGTGCCACTGGAGGTCACCCTGGATGCTTCGGCATCCTCCGACTCAGAC GGAATCGTGACGGTGCAGTGGGATTGCGAAGGGGACGGCATCTTCGAGGC CGAGGGCAACTGGACCGCTCAGACCTCCAAGACACATATCTGCACGTACG ATGTAGACGGAGCTTACCAGGCTACGGTTAAGACGACCAACTCCCTGGTG AGTGCCTCCCTTGTGCATCCTATACATTATACTAGTATATTACTTGACTC GCTTCCTTCTCTCGCCGGCGTGTACACGTGTAACTGTAAAAAGCTCAAGC GAGCGCACCCCGCCACTGAGACAACCCCAACCAGAAACCTCATGAACTCG ATCGCGCCCCCCCTCCGCTTGTACACGCCTTCGACCTCTCCAGAATGCCT CTGCTTCGGACTACGTCGATATCCTTGCCGGGGAAGCGGTTGCCTCGACG ATGTCTCCGACTCCAGCGCCGGTTGCGGTCACCGACTCACCCTTGTTCAC CCCGGCCCCAGTCACGGCTCCAGTCGCTGCCCCTGTCGGGGAGCCGCTGA CGTCTCCGCCGGAGCTGCAGTGGGAGGTGGACAATGCCACAGGGGTGCGT TCTGGCGAGCTAGAGTTTGGCGTGGTCGAGCTCGACAACTTCTGGGGGAA GACCACCACGCGAGGATACAACGGACAGGTATATATTATGTAAATATATT ATGTGAAAACAACGATATGGAAGGTGATCAACTATTAATGTTAATACATC AATAAATTATATGAAAATAACGATGTGGGAGGTAATATTATGCAAAACCC CCCGATGTAGATTAATACGTATAGGAGGAAGCTCCGAGGGAAAATTATGC TAACGTTTAGGTATATATCTTTTTTCTTACTTTTATTCCTTCGACGACCG TGGAGAATGGAGAACCTGGAAAGAGTTCCTGTCTAGGATAGACATTCGTG TGAGTCTTTTAAGAATCGAAGGGTAGCTTACCCGTTTTATGTATCCTCGT CCAAAGGTAGCTGCTTCCGATTAAAAGGCTATGCGACTAAGCAAGCGCGA ACTAACTTGTCTAGACTTAATCCCTTGCTACTTGTCGATCTTTGCTCCCT TCCTTGTTGTCCCCGAACCTGCAGATTCCCGGGCCCACCATCCGCATGGA GGCTTGTCGTTCGTACAACCTAACGCTCAAAAACATGCTGACGATGCCCA ACCCCGGCGGCGACTGGAACACTATGAAGGATCCAAACTCGACCAACGTG CACACCCACGGGCTTCACATATCTGGAGAGAGTCCCGCGGACGACGTGCT GTTTGTCGAGGTCCGGCCGGGAGAGCAACACACCTGTGAGTATGGTGTGT GTGTGCGTGTGTGGCAACCGGGTCGCCGCCGCCGCCGACAGAGCTTCGAA ATGTCTGGGAAAGTTCCTTTACCAAAGGGAAAGTTGGTGATTATGAGAGG GCTTGGGCAGCCGGGCCCATATCTACGTGTCACAACAGAAGCGATTGGCT TGGCTTGGCTGTTTTTGGTAGCGTATAGACGACTCGGGCAATGTCCGATC GGGACAATTCGGGACACCGTTGCCCTACTCTCGTGCCGTACGTACGTTCT TTTGTCTTAAGACGGAAAACCGCCTTCTAGCGGTGGATAATATTACGAGC ACACGAGCACGCCTTTGTGTCAGGATTCCTTCCTCGTCTCTACCCCTCCT TGCTGTCCATTCGAATTGAATTCAACTCCCTCCCCTCCCCTCCCCTCCTC CGTAAATATCCTCGTCCCCACCCCCACCCCCACCAGACGTGTACACGATT CCATGCGATCACGCGGGAGGAACATTTTGGTACCACCCACACCACCACGG CTCCACGGCGCTGCAGACTGGCGGAGGAGCCATGGGAGTTCTAATCATGG AGGACAGGCCCGATGTTCACGGAATACCGGACCAGTACTCCGACATGCCC GAGCTAGTGGTGGCAATTCAGGCGAGTCTCTTCTCTGTGGAGTCTGTTTT ATACATATACTAAATTATATGCTAAAAAATGATATAACATACTATCAAAG AGAAAACAGGCGTTGTGAAGGACCGCGGGTTTGCTGTGGTTTTGTTAAGC TTTTGCCTCCTCTGAAAAAACTACGGAGACCTTTAAAATATCTTCGTGAG AGCGCGTTGTGACGTCGATCTGCTGCCGGCGGGTCTCTTCAGGAGATGTA TCCGGAGCTGATCGAGGCGGACCGAGATGCGGCCGGAGGAGAGCTCTTTA ACACTACCGCCACCTCGAGGTAACGTCCAATGGCGGAGACAAGCTTGAAG GGCTCGATAGACCCCGAGTGTCAATTGTTTTCCTTCTGGTCTTGGTTGAT AGGACGTAGCGCTGGTACGTGTTATATTGAAGCAAACGTGGTAGGCGCGC TGGAAGGGAGTGATTACGATTGCGACCGCGGGCAGAGGATACTTTTAGCT TTTTGGAGCATATCGCTCGATGATCATGTCTGGCATAACACTTTACCGTT GTACCAAGCATGGAGGACGGAAAGAGAGAAAGCCTTGAGGCAATCGATAT GATCTGTTGGTGTACGGTACCGCCCGATAGGGGGCGCCTGTATATATTGC CTATGCATCGCAGGCAATACGCCGGTATATATATATATATTTTTTTAATG TTATTTCTCGTTCTTCATTTTTCGATCAAAATCATGTAATCATGTAACCG GTAGGCATTACCTGGTGAACGGCATGGTGGTGCCCTCCATCGATCTCGAG GCCGGCAAGTGGCTACGTCTTCGCATTTCCTTCGCCGGGCAGGGCGATGA CCACGCCATTTCTCTGCAAAACTCCAGCGACTGCGAAATGAATCTTCTCG CGAAGGACGGGGTTTACCTCGGAGAAGTGCCGCGAGTCGAGGCCAAGCTG TTTTTTACGCCTTCCTCGAGGTTG
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Coding sequence (CDS) from alignment at H-elongata_contig16878:322..7145+

>mRNA_H-elongata_contig16878.4281.1 ID=mRNA_H-elongata_contig16878.4281.1|Name=mRNA_H-elongata_contig16878.4281.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4704bp|location=Sequence derived from alignment at H-elongata_contig16878:322..7145+ (Himanthalia elongata Himel1 dioecious)
TACGACGATGATTGCGTGGTGGAGACTTACTTCTGTGAGAAGGACAACCG
GCTGGCTCGCATCGAAGTGGTTCTCGACGAGGCCACCAACACCGTCACCT
GCGGCACGCAAGTAATACTAATCAACGACTGGTGCACCGGTTCCAACCAC
CACGGAGGCGGCGGCATGGACTTCTTTGAAAATGGCGATATGGCGCTCGC
CGTAGGAGACATGTCCAAGTACGACGATGATTGCGTGGTGGAGACTTACT
TCTGTGAGAAGGACAACCGGCTGGCTCGCATCGAAGTGGTTCTCGACGAG
GCCACCAACACCGTCACCTGCGGCACGCAAGTAATACTAATCAACGACTG
GTGCACCGGTTCCAACCACCACGGAGGCGGCGGCATGGACTTCTTTGAAA
ATGGCGATATGGCGCTCGCCGTAGGAGACATGTCCAAGGCGGATCAGGTC
GACGCCGGTGACCAGGAAGAAAACACGTGCCTAGTGGAGGGTGTGGCCCT
ACCACAGGGAAATTTTCGTGCACAGCTAGAAGACTTCAATGAGGGCAAGC
TGTTGCGGATTTCCGCCGATGCCCTCGTGGCGGAGGCTCCCGACACTGCG
GACACTACTGGGTTCCTAGTCCGAGGCGAGGATTTCTGGGCGGATCAGGT
CGACGCCGGTGACCAGGAAGAAAACACGTGCCTAGTGGAGGGTGTGGCCC
TACCACAGGGAAATTTTCGTGCACAGCTAGAAGACTTCAATGAGGGCAAG
CTGTTGCGGATTTCCGCCGATGCCCTCGTGGCGGAGGCTCCCGACACTGC
GGACACTACTGGGTTCCTAGTCCGAGGCGAGGATTTCTGGCTCGAGGCCA
AGGGCTTCCGCAACCCGTTCCGCTTGGTGATTCTGCCGGGCTCTGGCAAC
GTTGTCGTTGCCGACGTGGGGCTAAACACTGCGGAGAGTTTCAAGGTAGT
ACCCAACCCGCTCGAAGCGGAGGAGGGCGCGGCGATGGGGAACTACGGCT
GGCCATGCATGGAGGGTAACGCGTGGATACCGACCGACACGAACACCTCG
AGGCCAAGGGCTTCCGCAACCCGTTCCGCTTGGTGATTCTGCCGGGCTCT
GGCAACGTTGTCGTTGCCGACGTGGGGCTAAACACTGCGGAGAGTTTCAA
GGTAGTACCCAACCCGCTCGAAGCGGAGGAGGGCGCGGCGATGGGGAACT
ACGGCTGGCCATGCATGGAGGGTAACGCGTGGATACCGACCGACACGAAC
ACGTGGCTCGTCGAGAATAAGAACGACGCATGCGATGGCGTGCGAGGCAC
AACACTTGGCCTCCCATTAGAGATCGACTACGACGACCTCATGGATCAAG
CTCTAGCAGGAGAGGTGGACTGGGTGCCCGCGTCCTATACCTATAGCTCA
GGTGGCTCGTCGAGAATAAGAACGACGCATGCGATGGCGTGCGAGGCACA
ACACTTGGCCTCCCATTAGAGATCGACTACGACGACCTCATGGATCAAGC
TCTAGCAGGAGAGGTGGACTGGGTGCCCGCGTCCTATACCTATAGCTCAG
AAATCATCGACTCCGAGTATCCAGACACATGCGCCAGCACTCTGCATTCA
GTGTCAGCTCTCCACATCTACCAGGGGGGAAATCTGCCCGATCGATACTC
CAACGCGATGCTTGTAGGCGACTATTCAAAGAAATCATCGACTCCGAGTA
TCCAGACACATGCGCCAGCACTCTGCATTCAGTGTCAGCTCTCCACATCT
ACCAGGGGGGAAATCTGCCCGATCGATACTCCAACGCGATGCTTGTAGGC
GACTATTCAAAGGATTGCGTGTTCTATTTCGACGTGGACGCCGAGGCCGG
AACGGTGGACTGGACTGCCCCCCACGTGCTGTTTGAATCGCGCTCCATCG
TAGACTTCAATACTGATCCAAAGACTGGATTGCGTGTTCTATTTCGACGT
GGACGCCGAGGCCGGAACGGTGGACTGGACTGCCCCCCACGTGCTGTTTG
AATCGCGCTCCATCGTAGACTTCAATACTGATCCAAAGACTGGTATATTG
TATGCCATCGATGCGAAGATCTCCGTCCTCATCAAGATCCTCGGAGTTGG
CGGCACGATCGGCGCCGTTTCGACTAGTCCGACCGTTTCGACTGTTCCGG
ACGTGGTGCTCCAGGCTGACGTTACTAATGGCACGGTATATTGTATGCCA
TCGATGCGAAGATCTCCGTCCTCATCAAGATCCTCGGAGTTGGCGGCACG
ATCGGCGCCGTTTCGACTAGTCCGACCGTTTCGACTGTTCCGGACGTGGT
GCTCCAGGCTGACGTTACTAATGGCACGGTGCCACTGGAGGTCACCCTGG
ATGCTTCGGCATCCTCCGACTCAGACGGAATCGTGACGGTGCAGTGGGAT
TGCGAAGGGGACGGCATCTTCGAGGCCGAGGGCAACTGGACCGCTCAGAC
CTCCAAGACACATATCTGCACGTACGATGTAGACGGAGCTTACCAGGCTA
CGGTTAAGACGACCAACTCCCTGGTGCCACTGGAGGTCACCCTGGATGCT
TCGGCATCCTCCGACTCAGACGGAATCGTGACGGTGCAGTGGGATTGCGA
AGGGGACGGCATCTTCGAGGCCGAGGGCAACTGGACCGCTCAGACCTCCA
AGACACATATCTGCACGTACGATGTAGACGGAGCTTACCAGGCTACGGTT
AAGACGACCAACTCCCTGAATGCCTCTGCTTCGGACTACGTCGATATCCT
TGCCGGGGAAGCGGTTGCCTCGACGATGTCTCCGACTCCAGCGCCGGTTG
CGGTCACCGACTCACCCTTGTTCACCCCGGCCCCAGTCACGGCTCCAGTC
GCTGCCCCTGTCGGGGAGCCGCTGACGTCTCCGCCGGAGCTGCAGTGGGA
GGTGGACAATGCCACAGGGGTGCGTTCTGGCGAGCTAGAGTTTGGCGTGG
TCGAGCTCGACAACTTCTGGGGGAAGACCACCACGCGAGGATACAACGGA
CAGAATGCCTCTGCTTCGGACTACGTCGATATCCTTGCCGGGGAAGCGGT
TGCCTCGACGATGTCTCCGACTCCAGCGCCGGTTGCGGTCACCGACTCAC
CCTTGTTCACCCCGGCCCCAGTCACGGCTCCAGTCGCTGCCCCTGTCGGG
GAGCCGCTGACGTCTCCGCCGGAGCTGCAGTGGGAGGTGGACAATGCCAC
AGGGGTGCGTTCTGGCGAGCTAGAGTTTGGCGTGGTCGAGCTCGACAACT
TCTGGGGGAAGACCACCACGCGAGGATACAACGGACAGATTCCCGGGCCC
ACCATCCGCATGGAGGCTTGTCGTTCGTACAACCTAACGCTCAAAAACAT
GCTGACGATGCCCAACCCCGGCGGCGACTGGAACACTATGAAGGATCCAA
ACTCGACCAACGTGCACACCCACGGGCTTCACATATCTGGAGAGAGTCCC
GCGGACGACGTGCTGTTTGTCGAGGTCCGGCCGGGAGAGCAACACACCTA
TTCCCGGGCCCACCATCCGCATGGAGGCTTGTCGTTCGTACAACCTAACG
CTCAAAAACATGCTGACGATGCCCAACCCCGGCGGCGACTGGAACACTAT
GAAGGATCCAAACTCGACCAACGTGCACACCCACGGGCTTCACATATCTG
GAGAGAGTCCCGCGGACGACGTGCTGTTTGTCGAGGTCCGGCCGGGAGAG
CAACACACCTACGTGTACACGATTCCATGCGATCACGCGGGAGGAACATT
TTGGTACCACCCACACCACCACGGCTCCACGGCGCTGCAGACTGGCGGAG
GAGCCATGGGAGTTCTAATCATGGAGGACAGGCCCGATGTTCACGGAATA
CCGGACCAGTACTCCGACATGCCCGAGCTAGTGGTGGCAATTCAGGCGAG
TCTCTTCTCTACGTGTACACGATTCCATGCGATCACGCGGGAGGAACATT
TTGGTACCACCCACACCACCACGGCTCCACGGCGCTGCAGACTGGCGGAG
GAGCCATGGGAGTTCTAATCATGGAGGACAGGCCCGATGTTCACGGAATA
CCGGACCAGTACTCCGACATGCCCGAGCTAGTGGTGGCAATTCAGGCGAG
TCTCTTCTCTGAGATGTATCCGGAGCTGATCGAGGCGGACCGAGATGCGG
CCGGAGGAGAGCTCTTTAACACTACCGCCACCTCGAGGAGATGTATCCGG
AGCTGATCGAGGCGGACCGAGATGCGGCCGGAGGAGAGCTCTTTAACACT
ACCGCCACCTCGAGGCATTACCTGGTGAACGGCATGGTGGTGCCCTCCAT
CGATCTCGAGGCCGGCAAGTGGCTACGTCTTCGCATTTCCTTCGCCGGGC
AGGGCGATGACCACGCCATTTCTCTGCAAAACTCCAGCGACTGCGAAATG
AATCTTCTCGCGAAGGACGGGGTTTACCTCGGAGAAGTGCCGCGAGTCGA
GGCCAAGCTGTTTTTTACGCCTTCCTCGAGGTTGGCATTACCTGGTGAAC
GGCATGGTGGTGCCCTCCATCGATCTCGAGGCCGGCAAGTGGCTACGTCT
TCGCATTTCCTTCGCCGGGCAGGGCGATGACCACGCCATTTCTCTGCAAA
ACTCCAGCGACTGCGAAATGAATCTTCTCGCGAAGGACGGGGTTTACCTC
GGAGAAGTGCCGCGAGTCGAGGCCAAGCTGTTTTTTACGCCTTCCTCGAG
GTTG
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