mRNA_H-elongata_contig16860.4274.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 253 bits (645), Expect = 3.550e-81 Identity = 121/129 (93.80%), Postives = 124/129 (96.12%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGEDLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 387
L ILSRGNVFADIYHMSFISFQTV +TFHRFCKYFA ELYDEY+YLPTGEDLRKVMEQY RIGFPGAVGSTDVTHIYW MCPYNQAR+YTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY
Sbjct: 88 LQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 216
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 253 bits (645), Expect = 4.210e-80 Identity = 121/129 (93.80%), Postives = 124/129 (96.12%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGEDLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 387
L ILSRGNVFADIYHMSFISFQTV +TFHRFCKYFA ELYDEY+YLPTGEDLRKVMEQY RIGFPGAVGSTDVTHIYW MCPYNQAR+YTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY
Sbjct: 179 LQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 307
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 201 bits (512), Expect = 2.200e-60 Identity = 97/129 (75.19%), Postives = 109/129 (84.50%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGEDLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 387
L IL+RGN FADIYHMSFIS QT ATFHRF +YFA E+Y E+I+LPTG+ +KVM QY R+GF GA GSTDVTHI W MCPYNQAR YTGKEG PTVA+QVTVDH+ RVLAVT GFTG+TNDK+IIRY
Sbjct: 163 LQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRY 291
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.810e-52 Identity = 86/129 (66.67%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGE--DLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTII 381
L IL RGNVF IY++S++S TV FH+FC++FA E+YDE+I+LP+ E +L +VM QY ++GFPGA+GSTDVTHI W CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAVT GFTG+TNDKTII
Sbjct: 132 LTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTII 260
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.380e-51 Identity = 86/129 (66.67%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGED--LRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTII 381
L IL RGN FA IY MS++S +TV FH+FC++FA E+YDE I+LPT E L VM+QY R+GF GAVGS DVTHI W CPYNQAR YTGKEG PT+A+QVTVDH+GR +AVT GFTG+TNDKTI+
Sbjct: 90 LTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIV 218
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 171 bits (433), Expect = 9.250e-51 Identity = 80/129 (62.02%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGEDLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 387
L IL RGN F DI +S +S ATFH+FCK+FA+EL++E+IYLPTG +VM Y ++G GA+GSTDVTHI W MCP+ R YTGKEG PT+A+QVTVDH+GR +A+T GFTGATNDKTI+RY
Sbjct: 8 LQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIMRY 136
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 172 bits (436), Expect = 2.140e-49 Identity = 81/129 (62.79%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGEDLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 387
L IL RGN F DI +S +S ATFH+FCK+FA+EL++E+IYLPTG +VM Y ++G GA+GSTDVTHI W MCP+ R YTGKEG PT+A+QVTVDH+GR +A+T GFTGATNDKTIIRY
Sbjct: 255 LQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRY 383
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.810e-48 Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGE--DLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTII 381
L IL RGN FA IY MS++S TV A FH FCK+FA E+YDE+IYLP+ + +L VM+QY R+GF GA+GS DVTHI W CPYN R YTGKEG PT+ +QVTV+H+GR AVT GFTG+TNDKTI+
Sbjct: 130 LTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIV 258
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 167 bits (422), Expect = 7.040e-48 Identity = 80/129 (62.02%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGE--DLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTII 381
L IL RGN FA IY +S++S +TV FH+FCK+FA E+YDE+IYLP+ + +L VM+QY R+GF GA+GS DVTHI W CPYN AR YTGKEG PTV +QVTV+H+GR +AVT GFT +TNDKT +
Sbjct: 103 LTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTV 231
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 162 bits (410), Expect = 2.630e-46 Identity = 76/127 (59.84%), Postives = 96/127 (75.59%), Query Frame = 1
Query: 7 ILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGEDLRKVMEQYHRIGFPGAVGSTDVTHIYWCMCPYNQARMYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRY 387
+L +GN F D+ +S +S TFH+FC++FA E++DE+IYLPTG L +VM +H++G+ GA GSTDVTHI W MCP+ R +TGKEG PT+A+ VTVDH GR LAVT GFTGATNDKTIIRY
Sbjct: 43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRY 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16860.4274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16860.4274.1 >prot_H-elongata_contig16860.4274.1 ID=prot_H-elongata_contig16860.4274.1|Name=mRNA_H-elongata_contig16860.4274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp LHILSRGNVFADIYHMSFISFQTVGATFHRFCKYFAEELYDEYIYLPTGEback to top mRNA from alignment at H-elongata_contig16860:6430..6816- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16860.4274.1 ID=mRNA_H-elongata_contig16860.4274.1|Name=mRNA_H-elongata_contig16860.4274.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=387bp|location=Sequence derived from alignment at H-elongata_contig16860:6430..6816- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16860:6430..6816- >mRNA_H-elongata_contig16860.4274.1 ID=mRNA_H-elongata_contig16860.4274.1|Name=mRNA_H-elongata_contig16860.4274.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=774bp|location=Sequence derived from alignment at H-elongata_contig16860:6430..6816- (Himanthalia elongata Himel1 dioecious)back to top |