mRNA_H-elongata_contig16796.4240.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: A0A6H5KW21_9PHAE (Exportin-T n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW21_9PHAE) HSP 1 Score: 604 bits (1557), Expect = 8.640e-204 Identity = 362/590 (61.36%), Postives = 404/590 (68.47%), Query Frame = 1
Query: 1 QILEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDGVVPYVDVIVPGVQGMLDS-RGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXX------KGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGTGFTSVATCDPNTQDSANRMLHAVREGHCIGFPSGGWPAFTNEADKSVDMGLPGRGVDGMGT--AIPPQLLPHEAAERSGVLKLYLSVIQHLSSNGLAGVLSSPTNGPHLDSVLRSVLGGISGAEDAATKKMSLYIFSLLLGGFNRGRSGGSEVGNGGGATPAATKAVGGAEGTGAAA-------------GAVVQRRALVGKGGGLWQGMGATVDMEPAVQAAVTAFALEEVVPASLRCLMD-EPLVGLDLRDATAMSAVVHMGALLKEARSASGGSAGFVGAAAVACKCTPQVAEQLQRAVESAADGPAITTALKAFAQHMKPAR 1701
++LEAICG QGL N DVTLRTR CY LTKLVKA+++GVVPYVDVIVPGVQ +LDS +G+ +DLSDEA+LNLYETIG+LVGMPNVPV QV+ LD VL PQM +++ L +AA KG +DA AELAA VGAMANVSKGFK VVA EV+ F QALEAA SA+ +F +HVALRAKTMFLVHGL+PCLGEGLL+ L L LL+LVQEGDGKDLMEV +LNQL IE+GPK+AQLLDG L+PF RR YQL PG G T G A QLL HE AER+G KL SVIQH+SSNGLAGVLSSPTN PHLD VLRSV+ G+SGAEDA+TKK LYIFSLLLGGFNRGRSGG +VG G GGA G A A QRRAL GKGGGLW G G TVDMEP VQ+AVTAF E VPA+L+CL+D P GLDLRDA AMSA+V+MGALLKEAR ASGGSA FVG AA+AC CTPQVAEQLQ AVE AADGPAI TALKAFAQHM+P R
Sbjct: 43 KVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRVAAAGAGGVAGLVGESEKGGDDAIGAELAAGVGAMANVSKGFKPVVAAEVEARFLQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGG-DVGAG----------KGGASANGPAGXXXXXXXXXKSLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACGCTPQVAEQLQLAVEGAADGPAIATALKAFAQHMRPIR 621
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI) HSP 1 Score: 609 bits (1570), Expect = 1.200e-198 Identity = 367/593 (61.89%), Postives = 410/593 (69.14%), Query Frame = 1
Query: 1 QILEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDGVVPYVDVIVPGVQGMLDS-RGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLA-TASAALGXXXXX-----KGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGTGFTSVATCDPNTQDSANRMLHAVREGHCI--GFPSGGWPAFTNEADKSVDMGLPGRGVDGMGTAIPPQLLPHEAAERSGVLKLYLSVIQHLSSNGLAGVLSSPTNGPHLDSVLRSVLGGISGAEDAATKKMSLYIFSLLLGGFNRGRSGGSEVGNGGGATPAATKAVGGA----------------EGTGAAAGAVVQRRALVGKGGGLWQGMGATVDMEPAVQAAVTAFALEEVVPASLRCLMD-EPLVGLDLRDATAMSAVVHMGALLKEARSASGGSAGFVGAAAVACKCTPQVAEQLQRAVESAADGPAITTALKAFAQHMKPAR 1701
++LEAICG QGL N DVTLRTR CY LTKLVKA+++GVVPYVDVIVPGVQ +LDS +G+ +DLSDEA+LNLYETIG+LVGMP VPV QV+ LD VL PQM +++ L ASA G KG +DA AELAA VGAMANVSKGFK VVA EV+ FFQALEAA SA+ +F +HVALRAKTMFLVHGL+PCLGEGLL+ L L LL+LVQEGDGKDLMEV +LNQL IE+GPK+AQLLDG L+PF RR YQL PG G T G+P+G G A QLL HE AER+G KL SVIQH+SSNGLAGVLSSPTN PHLD VLRSV+ G+SGAEDA+TKK LYIFSLLLGGFNRGRSGG PAA GGA +G AAA QRRAL GKGGGLW G G TVDMEP VQ+AVTAF E VPA+L+CL+D P GLDLRDA AMSA+V+MGALLKEAR ASGGSA FVG AA+AC CTPQVAEQLQ AVE AADGPAI ALKAFAQHM+P R
Sbjct: 575 KVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPTVPVPKQVQLLDGVLGPQMRRIAENLQRAASAGAGGGAGLVGEGEKGGDDAIGAELAAGVGAMANVSKGFKPVVAAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWPNGTTAELPXXXXXXXXXXXXXXXXXXXG-AEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGG---------VPAAAAGEGGAXXXXXXXXXXXXXXTKKGLRAAA---TQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIAAALKAFAQHMRPVR 1154
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.720e-54 Identity = 146/393 (37.15%), Postives = 197/393 (50.13%), Query Frame = 1
Query: 4 ILEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDGVVPYVDVIVPGVQGMLDSRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGTGFTSVATCDPNTQDSANRMLHAVREGHCIGFPSGGWPAFTNEADKSVDMGLPGRGVDGMGTAIPPQLLPHEAAERSGVLKLYLSVIQHLSSNGLAGVLSSPTNGPHLDSVLRSVLGGISGAEDAATKKMSLYIFSLL 1182
+LEA+C +GL N +R R Y L++LVKAL +VPYV+ +VP V +L S LSDE+ LNLYET+G LVGMP VP +V +L+ VL P + ++ LA A D +AA A LA + +ANVSKGF T PE F Q LEAA + + A H +RA+ +FLVH +VP LGEG+L ++ LV G DL E+ LLNQ + FGPKA +D +LLP R+ Y LMP P A + PP+ L HE ER+ +LK YLS + H+ S+G+ GVL S N P LD+VL+SVL ++ +D KK + F+ +
Sbjct: 567 VLEALCSERGLSNASRLVRARAAYNLSRLVKALAGDMVPYVEAVVPAVAALLRSGASQGLLSDESVLNLYETLGCLVGMPAVPAERRVAYLEGVLAPLLARVHEALAQPQAIAQ-------DPEAAGAALAFCLAGLANVSKGF-TKPLPEAVAPFTQELEAAAAVLLALPDHPGVRARAIFLVHRMVPVLGEGMLPRVG-PACAALVARCTGADLEEIVQLLNQFCVAFGPKAFAFMDAMLLPLIRKIYDLMP-----------PPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPLQS--------------PPEPLSHEVLERTALLKQYLSFLTHVVSDGMLGVLCSAANAPQLDAVLQSVLDTLAQVDDPVAKKSCIAAFAAM 925
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: A0A448ZS68_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS68_9STRA) HSP 1 Score: 149 bits (375), Expect = 6.480e-33 Identity = 122/405 (30.12%), Postives = 191/405 (47.16%), Query Frame = 1
Query: 1 QILEAICGSQGLGNPDVTLRTRCCYLLTKLVKAL------RDG----VVPYVDVIVPGVQGMLDSRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGTGFTSVATCDPNTQDSANRMLHAVREGHCIGFPSGGWPAFTNEADKSVDMGLPGRGVDGMGTAIPPQLLPHEAAERSGVLKLYLSVIQHLSSNGLAGVLSSPTNGPHLDSVLRSVLGGISGAEDAATKKMSLYIFSLLL 1185
++L AI G++GL + D +R+RCCYLL +L+K++ + G + PYV+ V G+Q +L+++ L + D LNL+ETIG L+G + + Q ++L V+ P + + L L D DA L+ SV A+A +SKGFK EVQ + + L+ A S + + +R KT V L+ CL + +L + R L IL++ + D+++V+ L+NQL I+F KA +LD LLPF ++ + L NT S N +G D +V PH E + KL +V+ H+ +N + GVL S N L+++L+S+ G ED+ KK L F LLL
Sbjct: 576 KVLGAITGTRGLQHEDAKVRSRCCYLLLRLIKSMGTSGNKKSGGNCLLRPYVETAVSGIQSLLENKSIELRVDDT--LNLFETIGLLLGKNGLSPSEQGQYLTQVMTPHVRSIETILNDKKHELAQ------DPDAYGETLSNSVAAIAYLSKGFKKPPI-EVQNVLLETLKVAFSVLEMLPNNEEVRNKTYIFVQRLIQCLEDKVLDVMP-RLLFILIKHCNSGDILDVSQLINQLCIKFRAKAMCVLDSNLLPFLQKCHHLS-------------NTVVSENSSAQERHQGE----------------DATV--------------------APHLRTEELSIQKLSFAVLNHVVANDVTGVLLSSANASSLEAILQSMSEGAINVEDSLMKKTCLIFFRLLL 921
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: A0A6U9ZEP0_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZEP0_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.530e-32 Identity = 119/407 (29.24%), Postives = 195/407 (47.91%), Query Frame = 1
Query: 1 QILEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDG------------VVPYVDVIVPGVQGMLDSRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGTGFTSVATCDPNTQDSANRMLHAVREGHCIGFPSGGWPAFTNEADKSVDMGLPGRGVDGMGTAIPPQLLPHEAAERSGVLKLYLSVIQHLSSNGLAGVLSSPTNGPHLDSVLRSVLGGISGAEDAATKKMSLYIFSLLL 1185
++L A+ G++GL + + +R+RCCY L +L+K++ + + PYV+ V G+QG+L++ + ++L E LNL+ETIG L+G + + Q ++L V+ P + + L G D DA L+ S+ A+A +SKGFK EVQ++ + L A S + + +R KT V L+ CLG+ +L + R L +L+Q +D+++V+ L+NQL I+F KA LD LLPF ++ + L ++A D Q+ + H V N A + PH E+ + KL +V+ H+ +N + GVL S TN L+++L+S+ G ED KK L F +LL
Sbjct: 402 KLLGAMTGTRGLQHENAKVRSRCCYSLLRLIKSVGNTNNANKSNESSCLLRPYVETAVSGIQGLLEN--ENIELRVEDTLNLFETIGLLLGKNGLSPSEQGQYLAQVMTPHVRSIETILN------GKKQELAQDPDAYGETLSNSIAAIAYLSKGFKKPPF-EVQSVLLETLRVAFSVLETLPTNEEVRNKTYVFVQRLIQCLGDKVLDVIP-RLLFLLIQHCTAEDILDVSQLINQLCIKFRAKAMCALDSNLLPFLQKCHHLS-----NTIAADDSTGQE--RQQFHGV-----------------NVA-----------------------VAPHLRTEQLSIQKLSYAVLNHVVTNEVTGVLLSSTNVSSLEAILQSMSEGAINVEDPLMKKTCLIFFRVLL 751
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: A0A1E7FPN3_9STRA (Exportin-T n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPN3_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.920e-30 Identity = 118/404 (29.21%), Postives = 187/404 (46.29%), Query Frame = 1
Query: 1 QILEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDG---------VVPYVDVIVPGVQGMLDSRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGTGFTSVATCDPNTQDSANRMLHAVREGHCIGFPSGGWPAFTNEADKSVDMGLPGRGVDGMGTAIPPQLLPHEAAERSGVLKLYLSVIQHLSSNGLAGVLSSPTNGPHLDSVLRSVLGGISGAEDAATKKMSLYIFSLLL 1185
++L A+ G +GL + + +R+RCCYLL +L+K + + PYV+ V G+QG+L++ L L D LNL+ETIG L+G + + Q ++L +V+ P + + L + D D L+ S+ A+A +SKGFK + EVQT+ + LE A S + A + +R KT V L+ CL + +L + R L +L+Q +D+++V+ L+NQL I+F A LD LLP+ ++ + + G D+S PG+ V+ + PH E+ + KL +V+ H+ SN + VL S TN L +L+S+ G ED KK L F LLL
Sbjct: 579 KVLGAMTGPRGLQHENGRVRSRCCYLLLRLIKYVGSSSNKSNESSVLRPYVENAVSGIQGLLENNNVQLRLEDT--LNLFETIGLLLGKNGLSPSEQGQYLTNVMTPHVHSIKTILNERKQYISQ------DPDTYEQTLSNSIAAIAYLSKGFKKP-STEVQTVLLETLEVAFSVLEALPNNEEIRNKTYVFVQRLIQCLEDKVLNIMP-RLLFLLIQHCTAEDILDVSQLINQLCIKFKANAICALDSNLLPYLQKCHHISNTIG-----------------------------------------VDESALEHQPGQNVE---------VAPHLRTEQLSIQKLSYAVLNHIVSNDVTAVLISLTNISSLGVILQSMSEGAVCVEDPLMKKTCLIFFRLLL 922
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: B7G7L1_PHATC (Exportin-T n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7L1_PHATC) HSP 1 Score: 133 bits (334), Expect = 5.430e-28 Identity = 83/257 (32.30%), Postives = 144/257 (56.03%), Query Frame = 1
Query: 1 QILEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDGVVPYVDVIVPGVQGMLDSRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGT 771
++L+A+ G++GL + +R+RCCYLL +LVKA+ + P+V+ V G+QG+L + L+L + L L+ETIG L+G + Q R+L V+ P + + +L D + LA S+ A+A++SKGF A +Q + + + + + A H +R KTM L+ ++ CLG+ +L ++ R L IL++ + +D++ V+ + NQL I+F + ++DG L+PF R+ Y L+P T
Sbjct: 592 RVLDAMTGARGLQHGHARVRSRCCYLLLRLVKAIAPLLRPFVETAVAGIQGLLTNTT--LELRPDDTLYLFETIGLLLGKTGIDAPEQARYLTLVMTPHVRSIEKSLQD--------PRLLQDTEFFGDRLAQSIAALAHLSKGFSKP-AQSIQLVLMETVNITQIIMEALPNHEQVRNKTMVLLPRMIQCLGDQVLDKIP-RFLYILIEHCNSEDVLFVSQIFNQLCIKFKEASVPVIDGALMPFLRKCYALVPAT 836
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: B8C3C8_THAPS (Exportin-T n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C8_THAPS) HSP 1 Score: 120 bits (301), Expect = 5.580e-24 Identity = 84/266 (31.58%), Postives = 139/266 (52.26%), Query Frame = 1
Query: 4 ILEAICGSQGLGNPDVTLRTRCCYLLTKLVKAL-RDGVVPYVDVIVPGVQGMLDSRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAELAASVGAMANVSKGFKTVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQL-MPGTGFTSVATC 795
+L A+ G +GL +P +R+RCCYLL +LVK++ + PYV+V+V G+Q +L + L L L L+E G L+G + VQ R +VL P + + TL + A D + +L+ S+ A+A +SKG++ PEVQ + A++ +S + A +R +T L+ ++ CLGE +L + +L +D+++V+ LLNQL I+F AA +D LLPF ++ + + T A+C
Sbjct: 749 LLGALSGDRGLQHPHARVRSRCCYLLLRLVKSVGAKAMRPYVEVVVDGIQRLLFPSTNILQLPANEALYLFEITGTLLGTTGLDNEVQQRCATAVLTPHVQSIEKTLQSPDLAR--------DVEQYGEQLSMSISAIAQLSKGWQNHPPPEVQAVLVAAVDVCRSVLVALPSSPLVRNRTAVLLQRMILCLGERVLPTMPAFLDALLSHCSTEEDVLDVSQLLNQLCIKFKENAAPAIDVALLPFLQKVLTMQLSETSVVPTASC 1006
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: A0A1Y1IKH1_KLENI (Exportin-T n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKH1_KLENI) HSP 1 Score: 111 bits (277), Expect = 3.460e-21 Identity = 110/403 (27.30%), Postives = 174/403 (43.18%), Query Frame = 1
Query: 4 ILEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDGVVPYVDVIVPGVQGMLD---------SRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAE---LAASVGAMANVSKGFKTVVA----PEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMPGTGFTSVATCDPNTQDSANRMLHAVREGHCIGFPSGGWPAFTNEADKSVDMGLPGRGVDGMGTAIPPQLLPHEAAERSGVLKLYLSVIQHLSSNGLAGVLSSPTNGPHLDSVLRSVLGGISGAEDAATKKMSL 1164
+L ++G+ +PD +R+R YL +LVK LR + P+VD I+ ++ +L+ S+GDG D L ++E IG LVG+ VP Q +L ++L P +L LA+ A GD + A L + A+A +SKGF +A PE+ F QALE A A+ ++ +LR++ + VH +V CLG + L +LV + + KD+ME L NQLM +F + LL +L R + L+P D GLP +G GT + E+ + +LYL+ IQ +++N L +P N L V+ +++ G D +K+ L
Sbjct: 531 VLSVFLDARGVHHPDAGVRSRASYLFMRLVKVLRLQLQPFVDTILQSLEDLLEAITTSESVPSKGDGTD----ERLYIFEAIGLLVGVDEVPSAKQQEYLTALLGPLFQQLESVLASIPA---------GDLEGPATAVNTLQQVILAIAYLSKGFGEHLAANKRPEIGANFKQALEKALKALQRLPKNKSLRSRVISFVHRMVECLGTNIFPLLPAAIQQLLV-DCEAKDMMEFIQLANQLMAKFKAAVSPLLVELLPAIVARVFALVP-------------------------------------------------DGGLP----EGPGTNT------EDIREQRDLYRLYLTFIQTITANALTSAFLTPQNSQCLTKVMTTLVEGARAHADMTVRKICL 860
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Match: UPI000C1CEC51 (exportin-T-like isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CEC51) HSP 1 Score: 96.7 bits (239), Expect = 1.160e-16 Identity = 77/259 (29.73%), Postives = 129/259 (49.81%), Query Frame = 1
Query: 7 LEAICGSQGLGNPDVTLRTRCCYLLTKLVKALRDGVVPYVDVIVPGVQGMLD--SRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMKLSVTLATASAALGXXXXXKGDNDAAAAELAASVGAMANVSKGFK----TVVAPEVQTMFFQALEAAKSAIAAFSQHVALRAKTMFLVHGLVPCLGEGLLKQLSLRTLLILVQEGDGKDLMEVTHLLNQLMIEFGPKAAQLLDGVLLPFARRAYQLMP 765
L A +G+ + +V +R R +L T+ VK L+ +VPYV++I+ +Q + +R D ++E +++E IG L+GM +VP Q +L S+L P ++ V L+ A A G + A A++ + A+ +SKGF T P + MF Q L+ + F + LR K +H +V LG + L + L L+ E K+L++ LLNQL+ +F +L+GV A R + ++P
Sbjct: 533 LGAFLDERGVHHSNVNVRRRASHLFTRFVKLLKPKLVPYVEIILQHLQDKVAEFTRMDTAS-NEEDGSHIFEAIGLLIGMEDVPPDKQSDYLSSLLSPLCQQVEVALSNAKA------HNPGGSPAQIADIKQIIMAINALSKGFSERLATASRPSIGLMFKQTLDFLLQILVVFPKIEPLRCKVTSFIHSMVNTLGASVFPYLP-KALEQLLPESQPKELVDFLVLLNQLICKFSAGVRDILEGVYPIIASRVFNILP 783 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16796.4240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16796.4240.1 >prot_H-elongata_contig16796.4240.1 ID=prot_H-elongata_contig16796.4240.1|Name=mRNA_H-elongata_contig16796.4240.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=517bp MLDSRGDGLDLSDEAELNLYETIGYLVGMPNVPVTVQVRHLDSVLRPQMMback to top mRNA from alignment at H-elongata_contig16796:2115..7554+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16796.4240.1 ID=mRNA_H-elongata_contig16796.4240.1|Name=mRNA_H-elongata_contig16796.4240.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5440bp|location=Sequence derived from alignment at H-elongata_contig16796:2115..7554+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16796:2115..7554+ >mRNA_H-elongata_contig16796.4240.1 ID=mRNA_H-elongata_contig16796.4240.1|Name=mRNA_H-elongata_contig16796.4240.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3102bp|location=Sequence derived from alignment at H-elongata_contig16796:2115..7554+ (Himanthalia elongata Himel1 dioecious)back to top |