mRNA_H-elongata_contig1679.4234.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: F6GWB2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=F6GWB2_VITVI) HSP 1 Score: 79.0 bits (193), Expect = 1.530e-17 Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 1 VARRRTFMWGCLLVVGSGLFFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRH 234
VA + WG + ++ +FF+ +YA V SKL+PP+G++++ AI++D +YC+LVPL I A+Y W+S+K+F+H
Sbjct: 10 VASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYCFLVPLTIPILIVAVYFHWLSMKLFKH 87
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: W4FKI4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FKI4_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.160e-17 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 22 MWGCLLVVGSGLFFVTSIYAIVFSKLMPPT----GHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRHN 237
+WG ++V S +FF+T +Y IV +K++PP ++DAIR D HYCYLVPL I + A+Y+SWVSLK FR N
Sbjct: 14 IWGYVIVSLSAIFFITFMYLIVVAKVLPPPTPGRSFPMMDAIRGDQHYCYLVPLTIPVAFIAMYVSWVSLKYFRQN 89
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A8J4PUN0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PUN0_9MYCE) HSP 1 Score: 79.7 bits (195), Expect = 2.600e-16 Identity = 33/75 (44.00%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 13 RTFMWGCLLVVGSGLFFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRHN 237
RT +G +++ + +FF++S Y + FSKL+P TG+ +LD I+ D++YC+LVP++I + +Y +W+SLK FRHN
Sbjct: 175 RTAFYGWIILFCTFIFFISSTYCLFFSKLLPDTGNKVLDFIKYDWYYCFLVPVLIPVTIITVYFNWLSLKFFRHN 249
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A1Y2GU76_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-domain-containing protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A1Y2GU76_9FUNG) HSP 1 Score: 75.1 bits (183), Expect = 1.190e-15 Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 16 TFMWGCLLVVGSGLFFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRHN 237
T++WG LL + + F TS+YA+V S MP TG+ LD I++D HYC L+P+ I + A+ +W+ +K+FRHN
Sbjct: 48 TYLWGYLLFFSTMIGFTTSMYALVASNYMPMTGNKTLDWIKQDSHYCMLLPVTIPVTVLAVLFNWLGMKLFRHN 121
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A067BPD6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPD6_SAPPC) HSP 1 Score: 74.3 bits (181), Expect = 1.360e-15 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 22 MWGCLLVVGSGLFFVTSIYAIVFSKLMPPTGHI----LLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRHN 237
+WG ++V S FF+T +Y IV +KL+PP+ +++ IR+D YCYL+PL I A+Y++WVSLK FRHN
Sbjct: 24 IWGYVIVGLSFAFFMTFLYLIVVAKLLPPSDDPARFPMMETIRQDHFYCYLIPLTIPAGFIAMYINWVSLKYFRHN 99
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A482SEM9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEM9_9ARCH) HSP 1 Score: 72.4 bits (176), Expect = 1.030e-14 Identity = 31/70 (44.29%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 28 GCLLVVGSGLFFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRHN 237
G +L+V S L V S+Y I+ SKLMP TG + LD +++D ++CYL+PL+I P+ + +YL+W+++ F+ N
Sbjct: 41 GLVLIVLSVLVLVISLYTILISKLMPYTGIVALDFVKDDEYFCYLLPLLILPTFSVVYLNWLAMNHFQQN 110
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A6A4ZJ79_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ79_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.210e-14 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 22 MWGCLLVVGSGLFFVTSI-----------YAIVFSKLMPPT----GHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRHN 237
+WG ++V S +FF+T + Y IV +K++PP ++DAIR D HYCYLVPL I + A+Y+SWVSLK FR N
Sbjct: 14 IWGYVIVSLSAIFFITFMQVHLSSDVVIEYLIVVAKVLPPPTPGRSFPMMDAIRGDQHYCYLVPLTIPVAFIAMYVSWVSLKYFRQN 100
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A1Y3MPZ7_PIRSE (Uncharacterized protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MPZ7_PIRSE) HSP 1 Score: 68.9 bits (167), Expect = 1.030e-13 Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 16 TFMWGCLLVVGSGLFFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRHN 237
T M G +L+ + FV +Y++VFS+ M TG+ +LD I+ D +YCYL+PL+I ++++W S+K FRHN
Sbjct: 4 THMAGWVLLFITYCVFVMGMYSVVFSRFMADTGNPVLDGIKNDNYYCYLIPLLIVIIYLFIFVNWFSMKFFRHN 77
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A2P6NM70_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NM70_9EUKA) HSP 1 Score: 69.3 bits (168), Expect = 1.180e-13 Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 58 FFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRH 234
FF S++ I SK++P TG+ LLD IRED HYCYL+PL + + + +W+++K FRH
Sbjct: 37 FFGASVFTIYISKVLPETGNPLLDTIREDHHYCYLIPLSLMTTYLFFFNNWLAMKFFRH 95
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Match: A0A022PQH2_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PQH2_ERYGU) HSP 1 Score: 68.2 bits (165), Expect = 2.610e-13 Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 25 WGCLLVVGSGLFFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLMIYPSCTALYLSWVSLKIFRH 234
WG ++ FV +YA V SKL+PP+ + ++ AI+ D++YC+LVPL + A+Y W+S+K+F+H
Sbjct: 16 WGWFFLIFGSFSFVFFLYAAVVSKLLPPSDNSVIQAIQNDWYYCFLVPLTLPILFVAVYFHWLSMKLFKH 85 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1679.4234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1679.4234.1 >prot_H-elongata_contig1679.4234.1 ID=prot_H-elongata_contig1679.4234.1|Name=mRNA_H-elongata_contig1679.4234.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp MWGCLLVVGSGLFFVTSIYAIVFSKLMPPTGHILLDAIREDFHYCYLVPLback to top mRNA from alignment at H-elongata_contig1679:10486..11251+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1679.4234.1 ID=mRNA_H-elongata_contig1679.4234.1|Name=mRNA_H-elongata_contig1679.4234.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=766bp|location=Sequence derived from alignment at H-elongata_contig1679:10486..11251+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1679:10486..11251+ >mRNA_H-elongata_contig1679.4234.1 ID=mRNA_H-elongata_contig1679.4234.1|Name=mRNA_H-elongata_contig1679.4234.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=438bp|location=Sequence derived from alignment at H-elongata_contig1679:10486..11251+ (Himanthalia elongata Himel1 dioecious)back to top |