mRNA_H-elongata_contig16776.4228.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16776.4228.1
Unique NamemRNA_H-elongata_contig16776.4228.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: D8LNT5_ECTSI (Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT5_ECTSI)

HSP 1 Score: 639 bits (1647), Expect = 2.780e-225
Identity = 329/413 (79.66%), Postives = 363/413 (87.89%), Query Frame = 1 
Query:   10 IDPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTED---PPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            +DPRTPTMTTALEIVKGAL AV+GFP+GKST+GSRI EGNKARITVKTGKAEAPT AQMQKV+DVV+++IAKD  CFRL+MPR DAE +YG AMYDVVEPPA V ELSLLYIEGLVLHSQL+PCL ST  VGKV+VTKQKFR NKQELEV+FDVEP+ +  T+D   PPQC PP+ ++V  LNA+E RVS++ G +G   +  +A   G   QKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTG +AHRFLRRGLFFSHRDLTQILD YEAGKKF+LYTGRGPSSD+LHLGHL+PFHFTKYLQ    FKVPLVVQLTDDEKFLFKP+LKLEECHRLAFENAKDIIACGF+ ESTFIFSDLDYIQ MYPVVLKIQKLVT+NQ RGI GFTESHNIG ++F AVQA
Sbjct:    5 VDPRTPTMTTALEIVKGALCAVIGFPIGKSTIGSRISEGNKARITVKTGKAEAPTAAQMQKVVDVVNEAIAKDQACFRLTMPRKDAESTYGSAMYDVVEPPAQVEELSLLYIEGLVLHSQLHPCLPSTGPVGKVSVTKQKFRVNKQELEVMFDVEPSTDTPTDDTATPPQCVPPSAETVVLLNASEARVSADDGVEGGVEESGKAAAEG--GQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGRKAHRFLRRGLFFSHRDLTQILDLYEAGKKFFLYTGRGPSSDALHLGHLVPFHFTKYLQ--EAFKVPLVVQLTDDEKFLFKPELKLEECHRLAFENAKDIIACGFDPESTFIFSDLDYIQHMYPVVLKIQKLVTYNQVRGIFGFTESHNIGCQAFPAVQA 413
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A835ZE99_9STRA (Tryptophan--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE99_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 2.760e-139
Identity = 227/416 (54.57%), Postives = 283/416 (68.03%), Query Frame = 1 
Query:   13 DPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIRVS-------SEGGSDGAARDRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            DPRTP M TA+EIVKGAL+AVLGFP+G+ST+GS+I EG+K RITV+    E P    M +V +V++  + KDL C   +M R  A+ +YG AMYD  E PA+V+ L+L Y+EGL LH+  +  L ST GVG++ +TK+++ + K++LEV+F+V P     T                     +R S                             Q VTPWEVEAD EVDY KLV +FGS LI+ED+VARVER+T  RAHRFLRRGLFFSHRDL Q+LD YE G+KFYLYTGRGPSS++LHLGHL+PF FT++LQ    F VPLV+QLTDDEKFLFK +L L E HRLA ENA+DIIAC F+   TF+FSDLDYI+++YPVVL+IQK VT NQ RGI GF +S NIG  +F AVQA
Sbjct:    4 DPRTPAMHTAMEIVKGALSAVLGFPLGRSTIGSKISEGDKGRITVQLASEEKPGPEAMLRVQEVINGIVEKDLSCHVFTMARAAADAAYGDAMYDKFEVPAEVTTLTLFYLEGLALHAAPHTYLPSTGGVGRIQITKERYMTAKRQLEVMFNVLPAAGASTXXXXXXXXXXXXXXXXXAVEPLRTSVPRLLXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEADEEVDYNKLVVAFGSQLISEDMVARVERLTNRRAHRFLRRGLFFSHRDLNQLLDLYEKGEKFYLYTGRGPSSEALHLGHLVPFQFTQWLQ--EAFGVPLVIQLTDDEKFLFKSNLPLAETHRLARENARDIIACEFDPAKTFMFSDLDYIKELYPVVLQIQKFVTFNQTRGIFGFNDSTNIGCIAFPAVQA 417
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: W7TK77_9STRA (Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK77_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 2.760e-134
Identity = 220/415 (53.01%), Postives = 285/415 (68.67%), Query Frame = 1 
Query:   19 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVE-PTEN------LGTEDPPQCPPPAIDSVAALNAAEIRVSSEG-GSDGAARDRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            RTP   T+  IVKGALA VLGFP+G +T+G+   EG++ R+TV+ G+A  PT  Q  +V + ++  +A + P     + R  A+ SY  AMY+    P  ++EL++ YIE +         ++ST  VG + + K KFRS K+ELE+ + V  P+E+      +  ED    P  + ++++ LN+  +R +S G G++         +  G+  Q VTPWEVE D E+DY+KL+KSFGS  ITE +V+R+ER+T  + HRFLRRGLFFSHRDLTQ+LD YE G KFYLYTGRGPSS+SLHLGHLIPFHFT+YLQ    F VPLV+QLTDDEKF FK  L LEECHRLA+ENAKD+IACGF+ + TFIFSDLDYIQ +YP VLKIQKLVT NQ RGI GFTES + G  +F AVQA
Sbjct:    8 RTPQAVTSALIVKGALANVLGFPIGGTTIGTHYSEGHRVRLTVQIGQAPDPTETQFIQVAETINTILAANQPVHVFKLARHRAQTSYKNAMYNRHAVPESITELTIAYIEKIAFSCTAEAVVASTGMVGAITINKTKFRSAKKELEIQYTVSTPSESGPAVLAVAKEDDETLP--SSEAISLLNSDTVRQASGGKGNEKGGNGGSIGSASGEGGQVVTPWEVEGDQEIDYDKLIKSFGSMRITESLVSRIERLTNRKCHRFLRRGLFFSHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQ--EAFDVPLVIQLTDDEKFQFKQGLALEECHRLAYENAKDVIACGFDVKKTFIFSDLDYIQHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQA 418
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A4D9CRR7_9STRA (Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRR7_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 1.100e-133
Identity = 222/415 (53.49%), Postives = 285/415 (68.67%), Query Frame = 1 
Query:   19 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVE-PTEN----LGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDG---GDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            RTP   T+  IVKGALA VLGFP+G +T+G+   EG++ R+TV+ G+A  PT  Q  +V + ++  +A + P     + R  A+ SY  AMY+    P  V+EL++ YIE +         ++ST  VG + + K KFRS K+ELE+ + V  P+E+    L          P+ ++++ LN+  +R +S  G +G  +  +  N G   G+  Q VTPWEVE D E+DY+KL+KSFGS  ITE +V+R+ER+T  + HRFLRRGLFFSHRDLTQ+LD YE G KFYLYTGRGPSS+SLHLGHLIPFHFT+YLQ    F VPLV+QLTDDEKF FK  L LEECHRLA+ENAKD+IACGF+ + TFIFSDLDYIQ +YP VLKIQKLVT NQ RGI GFTES + G  +F AVQA
Sbjct:    8 RTPQAVTSALIVKGALANVLGFPIGGTTIGTHYSEGHRVRLTVQIGQAPDPTETQFIQVAETINTILAANQPVHVFKLARHQAQTSYKNAMYNRHAVPESVTELTIAYIEKIAFSCTAEAVVASTGMVGAITINKTKFRSAKKELEIQYTVSTPSESGPAVLAVTKENDETLPSSEAISLLNSDTVRQAS--GGEGNEKRGNGGNIGSASGEGGQVVTPWEVEGDQEIDYDKLIKSFGSMRITESLVSRIERLTNRKCHRFLRRGLFFSHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQ--EAFDVPLVIQLTDDEKFQFKQGLALEECHRLAYENAKDVIACGFDVKKTFIFSDLDYIQYLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQA 418
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A0G4G1K6_VITBC (Tryptophan--tRNA ligase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G1K6_VITBC)

HSP 1 Score: 363 bits (931), Expect = 6.460e-117
Identity = 211/433 (48.73%), Postives = 273/433 (63.05%), Query Frame = 1 
Query:   19 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEA-PTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIR--------VSSEGGSDGAARDRDEAND---------------GGDRSQKVTPWEVEADGE--VDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            R P + TAL IVKGAL   L  P  +ST      +G   R  +  G   + P     +++ ++V+D +A ++P    ++ R  AE +YG AMYD    P  V+EL L++IE   +++ ++P   ST   G++ +TK K  SNK  LEV FD+ PTE    E   Q  P A +   A +    R        V+   G+D A        +               GG   Q+VTPWEVEAD E  +DY+KL+  FG S ITED ++R+ER+T  RAHRFLRRGLFFSHRDL  +L+ YE G+ FYLYTGRGPSS++LHLGHL+PF FTK+LQ  + F VPLV+QLTDDEKFLFK +L +EEC RLA+ENAKDI+A GF+++ TFIFSDLDYIQ MYP+VL+IQK VT+NQ RGI GFTES NIG  +F AVQA
Sbjct:    7 RHPLLDTALHIVKGALVVALRIPTARSTKSVDFKKGLPLRGAITVGPVTSEPNEEDKRRIQELVNDKVAANVPIRVFAVARQLAETTYGEAMYDDFGVPKSVTELRLVFIEKWNINANIFPVAQSTGACGRIDITKWKHNSNKNSLEVSFDLTPTEAYTDE---QNVPLATEEALANDQVPAREMVLPPADVAGTHGTDEATETNGNPQNSQXXXXXXXXXXXXTGG--GQRVTPWEVEADEETGIDYDKLIIQFGCSKITEDHISRIERLTKQRAHRFLRRGLFFSHRDLDMLLNAYEQGEPFYLYTGRGPSSEALHLGHLVPFWFTKWLQ--DAFNVPLVIQLTDDEKFLFKENLTVEECKRLAYENAKDILAIGFDKDKTFIFSDLDYIQTMYPLVLQIQKKVTYNQSRGIFGFTESDNIGKSAFPAVQA 432
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A7J6QYM2_PEROL (Tryptophan--tRNA ligase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QYM2_PEROL)

HSP 1 Score: 340 bits (872), Expect = 1.900e-110
Identity = 201/413 (48.67%), Postives = 266/413 (64.41%), Query Frame = 1 
Query:   19 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRL--SMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTEN---LGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVE-ADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            R+P    AL ++KGA+  VL  P G++T      EG   ++T+ + K E PT  Q + +   V + + ++ P F++   +PR  AEK Y   MYD  + P  V EL L+Y+E   L+  ++P + ST  +G++ +TK K+ + K  LE+ F VEP  +   +  ED      P +D +A     + +++ EG              G    QKVTPWEVE AD  +DY+KL++ FG S I + ++ R+ER+TG +AHRFLRRGLFFSHRDL  +LD YE G  FYLYTGRGPSS+SLHLGHL+PF FTK+LQ  +TF VPLV+QLTDDEKF FK  L LEE HRLA+ENAKDIIACGF+ + TFIFSDLDY+  MYP V KIQKLVT+NQ RG  GFT S ++G  SF A+QA
Sbjct:    7 RSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHEGG-GKLTLNSIKEE-PTEDQKELIATNVYNKVEENAP-FKVFTGVPRELAEKKYFDTMYDSFKVPDSVKELRLVYLEQWNLNCNVHPIVKSTGLLGEINLTKWKYSAKKATLEISFTVEPASDVFEMAEEDSNVEDLPPLD-IAVPYVPDDQLNQEGVL------------GVSEGQKVTPWEVEGADEGIDYDKLIRDFGCSPIDQKLIDRMERLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQ--DTFDVPLVIQLTDDEKFFFKDYLTLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQA 401
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A7J6P9A6_PEROL (Tryptophan--tRNA ligase n=4 Tax=Perkinsus TaxID=28000 RepID=A0A7J6P9A6_PEROL)

HSP 1 Score: 327 bits (838), Expect = 3.820e-103
Identity = 195/397 (49.12%), Postives = 258/397 (64.99%), Query Frame = 1 
Query:   67 AAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRL--SMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTEN---LGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVE-ADGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            +AVL  P G++T      EG   ++T+ + K E PT  Q + +   V + + ++ P F++   +PR  AEK Y   MYD  + P  V EL L+Y+E   L+  ++P + ST  +G++ +TK K+ + K  LE+ F VEPT +   +  ED      P +D +A     + +++ EG              G    QKVTPWEVE AD  +DY+KL++ FG + I + ++ R+ER+TG +AHRFLRRGLFFSHRDL  +LD YE G  FYLYTGRGPSS+SLHLGHL+PF FTK+LQ  +TF VPLV+QLTDDEKF FK  L LEE HRLA+ENAKDIIACGF+ + TFIFSDLDY+  MYP V KIQKLVT+NQ RG  GFT S ++G  SF A+QA
Sbjct:   20 SAVLRIPTGRTTERVSPHEGG-GKLTLNSIKEE-PTEDQKELIATNVYNKVEENAP-FKVFTGVPRELAEKKYFDTMYDSFKVPDSVKELRLVYLEQWNLNCNVHPIVKSTGLLGEINLTKWKYSAKKATLEISFTVEPTSDVFEMAEEDSNVEDLPPLD-IAVPYVPDDQLNQEGVL------------GVSEGQKVTPWEVEGADEGIDYDKLIRDFGCTPIDQKLIDRMERLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQ--DTFDVPLVIQLTDDEKFFFKDYLTLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQA 398
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: F0VBM7_NEOCL (Tryptophan--tRNA ligase n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VBM7_NEOCL)

HSP 1 Score: 316 bits (810), Expect = 5.750e-99
Identity = 186/431 (43.16%), Postives = 254/431 (58.93%), Query Frame = 1 
Query:   10 IDPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVEA-DGEVDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYE--------------------AGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            +  RTP    AL IVKGA    L    G++T   +  + NK  IT+     + PT ++ + +  +    I ++ P    ++PR  A + Y  +  D    PA+V E+ L+ +    +++ +YP L ST  + ++     KF + K++L +   V P +N           PA+     +   ++   S+          D  NDG D  Q VTPW+V+A +G +DY+KL+K FG S IT  +++R+E +TG RAH  LRRG+FFSHRDL  +LD  E                    +G  FYLYTGRGPSS++LH+GHL+PF FTKYLQ  + F VPLV+QLTDDEKFLFK +L LEE HRLAFENAKDIIACGF+ + TFIFSDL YIQ +YPV+L+IQK VT+NQ RG+ GF ES NIG  +F AVQA
Sbjct:    1 MSTRTPYQDAALAIVKGAACIALSLKTGRTTRNVKFSKDNKCSITLGPVDNQ-PTASEEELLKTLTQQKIEENCPFRVFTIPREVATRMYQESYLDEFGIPANVKEVRLVVLPEWNINANIYPTLKSTGQIAEIRFETVKFVAEKRQLCLTLQVVPADNGDA--------PAVAVEEKVAPEDLPTLSQVLPPSGVEGDDLGNDGQD-DQTVTPWDVQANEGGIDYDKLLKKFGCSAITPQLISRIEALTGKRAHHLLRRGIFFSHRDLNLLLDAIEKRQANLASEKREDGAGADAFSGPAFYLYTGRGPSSEALHIGHLVPFMFTKYLQ--DVFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNIGKSAFPAVQA 419
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: C5KK97_PERM5 (Tryptophan--tRNA ligase n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KK97_PERM5)

HSP 1 Score: 328 bits (840), Expect = 1.060e-97
Identity = 200/423 (47.28%), Postives = 265/423 (62.65%), Query Frame = 1 
Query:   19 RTPTMTTALEIVKGALAAVLGFPVGKSTVG-SRIIEGNKARITVKTGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRL--SMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPT--------ENLGTEDPPQCP---PPAIDSVAALNAAEIRVSSEGGSDGAARDRDEAND-GGDRSQKVTPWEVEADGE-VDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            R+P    AL ++KGA+  VL  P G++T   S  + G K  +T+ + K E PT  Q + +   V + + ++ P F++   +PR  AE+ Y   MYD  + P  V EL L+Y+E   L+  ++P + ST  +G+V +T  K+ + K  LE+ F +EP+        E+   ED P      P   D     +   + V +       A   D+    G    QKVTPWEVE   E +DY+KL++ FG S I + ++ R+E++TG +AHRFLRRGLFFSHRDL  +LD YE G  FYLYTGRGPSS+SLHLGHL+PF FTK+LQ  +TF VPLV+QLTDDEKF FK  L LEE HRLA+ENAKDIIACGF+ + TFIFSDLDY+  MYP V KIQKLVT+NQ RG  GFT S ++G  SF A+QA
Sbjct:    5 RSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHLGGGK--LTLNSIKEE-PTEEQKELIATNVYNKVEENAP-FKVFTGVPRDLAERKYFDTMYDSFKVPESVKELRLVYLEQWNLNCNVHPIIKSTGLLGEVNLTHWKYSAKKATLEISFTLEPSCDVFEMAEEDGNVEDLPSLDIAVPYVPDGTITYHFKGVIVVT------LAEQLDQNRVLGVSNCQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQ--DTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQA 415
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BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Match: A0A2A9M2P2_9APIC (Tryptophan--tRNA ligase n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M2P2_9APIC)

HSP 1 Score: 310 bits (793), Expect = 2.540e-96
Identity = 190/453 (41.94%), Postives = 255/453 (56.29%), Query Frame = 1 
Query:   19 RTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVKTGKAEA-PTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDVVEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQELEVVFDVEPT------------ENLGTEDPPQC----PPPAIDSVAALNAAEIRVSSEGGSDGAARDRDEANDGGDRSQKVTPWEVEADGE-VDYEKLVKSFGSSLITEDIVARVERVTGMRAHRFLRRGLFFSHRDLTQILDFYEA----------------------------GKKFYLYTGRGPSSDSLHLGHLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENAKDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTESHNIGYKSFHAVQA 1239
            RTP    AL IVKGA    LG   G++T   +  +  KA +T+  G  EA P+  +++ +  + S  I ++ P   L++PR  A++ Y  +  D    PA V  + L+ ++   +++ ++P L ST  +  +   +  F   K++L +   V P             +N+  E+ P      PP  ++        E   SSEG                   Q VTPWEV+   E +DY KL+K FG S IT ++VAR+E++TG RAH  LRRG+FFSHRDL  +LD  E                             G  FYLYTGRGPSS++LH+GHLIPF FTKYLQ  +TF VPLV+QLTDDEKFLFK +L LEE HRLAFENAKDIIACGF+ + TFIFSDL YIQ +YP++L+IQK VT+NQ RG+ GF ES N+G  +F AVQA
Sbjct:    5 RTPFQDAALAIVKGAACVALGLKTGRTTQNVKFSKDYKAVLTL--GPIEASPSATEVELLQTLTSQKIEENAPFRVLTVPRDVADRLYKESYLDEFGIPASVKSVRLVILDEWNINANIHPTLKSTGLISDIKFERFMFIEEKKQLSISIQVVPAVAADAADLCAEEQNVNGEELPSLSQVLPPSGVED-------EEAGSSEGS-----------------DQTVTPWEVQGSDEGIDYNKLLKKFGCSAITPELVARIEKLTGKRAHHLLRRGIFFSHRDLNLLLDALEKRQNAEKLQASKREDGSAGEAAKGDKESEGPAFYLYTGRGPSSEALHIGHLIPFMFTKYLQ--DTFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPIILEIQKKVTYNQVRGLFGFCESDNVGKSAFPAVQA 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16776.4228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNT5_ECTSI2.780e-22579.66Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZE99_9STRA2.760e-13954.57Tryptophan--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
W7TK77_9STRA2.760e-13453.01Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CRR7_9STRA1.100e-13353.49Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis sa... [more]
A0A0G4G1K6_VITBC6.460e-11748.73Tryptophan--tRNA ligase n=2 Tax=Vitrella brassicaf... [more]
A0A7J6QYM2_PEROL1.900e-11048.67Tryptophan--tRNA ligase n=1 Tax=Perkinsus olseni T... [more]
A0A7J6P9A6_PEROL3.820e-10349.12Tryptophan--tRNA ligase n=4 Tax=Perkinsus TaxID=28... [more]
F0VBM7_NEOCL5.750e-9943.16Tryptophan--tRNA ligase n=1 Tax=Neospora caninum (... [more]
C5KK97_PERM51.060e-9747.28Tryptophan--tRNA ligase n=2 Tax=Perkinsus marinus ... [more]
A0A2A9M2P2_9APIC2.540e-9641.94Tryptophan--tRNA ligase n=1 Tax=Besnoitia besnoiti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16776contigH-elongata_contig16776:977..7555 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score642.1
Seed ortholog evalue1.8e-181
Seed eggNOG ortholog2880.D8LNT5
KEGG rclassRC00055,RC00523
KEGG koko:K01867
KEGG ReactionR03664
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006469,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008285,GO:0009058,GO:0009059,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010835,GO:0016070,GO:0016874,GO:0016875,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022603,GO:0030234,GO:0031323,GO:0031324,GO:0031334,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0032991,GO:0033673,GO:0034641,GO:0034645,GO:0034660,GO:0042127,GO:0042325,GO:0042326,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043436,GO:0043549,GO:0043603,GO:0043604,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045765,GO:0045859,GO:0045936,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051239,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0090304,GO:0098772,GO:0140098,GO:0140101,GO:1901342,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:2000026
EggNOG free text desc.tryptophanyl-tRNA aminoacylation
EggNOG OGsCOG0180@1,KOG2145@2759
EC6.1.1.2
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTryptophan--tRNA ligase
Ec32 orthologEc-08_005870.1
Exons9
Model size1239
Cds size1239
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929979.7271082-CDS-H-elongata_contig16776:976..11231622929979.7271082-CDS-H-elongata_contig16776:976..1123Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 977..1123 +
1691679232.8940322-CDS-H-elongata_contig16776:976..11231691679232.8940322-CDS-H-elongata_contig16776:976..1123Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 977..1123 +
1622929979.7466307-CDS-H-elongata_contig16776:2475..26181622929979.7466307-CDS-H-elongata_contig16776:2475..2618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 2476..2618 +
1691679232.9104652-CDS-H-elongata_contig16776:2475..26181691679232.9104652-CDS-H-elongata_contig16776:2475..2618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 2476..2618 +
1622929979.7648048-CDS-H-elongata_contig16776:3029..31621622929979.7648048-CDS-H-elongata_contig16776:3029..3162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 3030..3162 +
1691679232.921441-CDS-H-elongata_contig16776:3029..31621691679232.921441-CDS-H-elongata_contig16776:3029..3162Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 3030..3162 +
1622929979.7824886-CDS-H-elongata_contig16776:3713..39531622929979.7824886-CDS-H-elongata_contig16776:3713..3953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 3714..3953 +
1691679232.9303854-CDS-H-elongata_contig16776:3713..39531691679232.9303854-CDS-H-elongata_contig16776:3713..3953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 3714..3953 +
1622929979.804795-CDS-H-elongata_contig16776:4196..43521622929979.804795-CDS-H-elongata_contig16776:4196..4352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 4197..4352 +
1691679232.937757-CDS-H-elongata_contig16776:4196..43521691679232.937757-CDS-H-elongata_contig16776:4196..4352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 4197..4352 +
1622929979.8196135-CDS-H-elongata_contig16776:5182..53091622929979.8196135-CDS-H-elongata_contig16776:5182..5309Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 5183..5309 +
1691679232.9460413-CDS-H-elongata_contig16776:5182..53091691679232.9460413-CDS-H-elongata_contig16776:5182..5309Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 5183..5309 +
1622929979.8367162-CDS-H-elongata_contig16776:5888..59651622929979.8367162-CDS-H-elongata_contig16776:5888..5965Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 5889..5965 +
1691679232.954665-CDS-H-elongata_contig16776:5888..59651691679232.954665-CDS-H-elongata_contig16776:5888..5965Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 5889..5965 +
1622929979.8549209-CDS-H-elongata_contig16776:6685..68131622929979.8549209-CDS-H-elongata_contig16776:6685..6813Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 6686..6813 +
1691679232.9650526-CDS-H-elongata_contig16776:6685..68131691679232.9650526-CDS-H-elongata_contig16776:6685..6813Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 6686..6813 +
1622929979.8699841-CDS-H-elongata_contig16776:7467..75551622929979.8699841-CDS-H-elongata_contig16776:7467..7555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 7468..7555 +
1691679232.9760506-CDS-H-elongata_contig16776:7467..75551691679232.9760506-CDS-H-elongata_contig16776:7467..7555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16776 7468..7555 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16776.4228.1prot_H-elongata_contig16776.4228.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16776 977..7555 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16776.4228.1

>prot_H-elongata_contig16776.4228.1 ID=prot_H-elongata_contig16776.4228.1|Name=mRNA_H-elongata_contig16776.4228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=413bp
MAAIDPRTPTMTTALEIVKGALAAVLGFPVGKSTVGSRIIEGNKARITVK
TGKAEAPTVAQMQKVMDVVSDSIAKDLPCFRLSMPRCDAEKSYGFAMYDV
VEPPADVSELSLLYIEGLVLHSQLYPCLSSTRGVGKVAVTKQKFRSNKQE
LEVVFDVEPTENLGTEDPPQCPPPAIDSVAALNAAEIRVSSEGGSDGAAR
DRDEANDGGDRSQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVER
VTGMRAHRFLRRGLFFSHRDLTQILDFYEAGKKFYLYTGRGPSSDSLHLG
HLIPFHFTKYLQARNTFKVPLVVQLTDDEKFLFKPDLKLEECHRLAFENA
KDIIACGFNQESTFIFSDLDYIQQMYPVVLKIQKLVTHNQDRGILGFTES
HNIGYKSFHAVQA
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mRNA from alignment at H-elongata_contig16776:977..7555+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16776.4228.1 ID=mRNA_H-elongata_contig16776.4228.1|Name=mRNA_H-elongata_contig16776.4228.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6579bp|location=Sequence derived from alignment at H-elongata_contig16776:977..7555+ (Himanthalia elongata Himel1 dioecious)
ATGGCGGCCATAGATCCGAGAACCCCTACCATGACCACGGCGCTTGAGAT
CGTCAAAGGAGCGCTAGCTGCGGTTTTAGGCTTCCCCGTGGGAAAGTCTA
CCGTCGGGAGCCGTATCATTGAGGGCAACAAAGCGCGCATCACCGTGGTG
AGCTAGTTGGAGCAGGTTCCTCGTGAGCCTAAATTCTGTTTTTTTATGAT
GGTGTCATCCATGTTTTTGAAATACTTGCTGTAGATGGACGCATAAAACT
CTGGGGCGTCCATTGCACCTAGATCAGACTCAGCTTGCGGCTCGTTCTAA
GCCCCATCTCGCGAACTAGATCCAGTGTCTCAACGGTGCATATATATGTA
ATTATGTATGTATTGTCGCACATTTAGCAGAAGGATCAACCGGATTTGGT
ATCTTTCTGTTCGTGGTCGGCTGAACAGGGAAAATAATTTCCCTGTCCCC
GTTCGCGCCTGAGATTTTGGTGTCGCGAGACGGGTTCAGCAGTCCCGTCC
CGCGTCAGCCTGCTCATTCTCGCAACCCAGGCTGAATCTGGTGCTCACTC
CCGGGATGCTCTCAATCTTCCCGTTTTCCGCAACGGCGTCCATCTCTACC
GTCAATCACCATCGGGTCATTCCCGATTTCTGGCTCAACTTGATTCCATG
AAAAACTAAGTACCTATCATTAGATTACTGATCGTACGCTGACAAGCATT
CATAGATAAACTCCTAGTCATGGGGGGCCTTCTGCTCAGTCAGCGGCAGC
AGTGCGCAACGGGATGTGTCCGAGTCGGAATTCAACATTTACCTACAGAG
CACTAAAATTTCGTTCCAGAGGCAGGTACGACATCATGGGTGAACACAAG
TAGCCTCATAAGACCGTCTGCGTGCCTCACTCCGTCAGATAGTCGTTAGG
CTCCATCGGGTATACGATTAAACCAATGCGTTGGAAACACTGGGCACTGT
TGAGGGCGGATAGTACCTAATTAATAGTCCGTCCGCGCCGTCGGCGAAAG
AATGCGGTTTCCATGCCTCAAATCGTCATGAACACCCTGAATGTTTCTCA
CGGGGGTTTGGGAAGTAACAAAACGGTTGCCTGCGACAGAACGCGATACC
ATCGTTGGGACCCCGTGTCTTTCTAAATATCTGTGAATTAATTCTCCCGT
TTGGGCATCTATTTCGAAGGTTATTACTAATAATACATACCGTAGTATGT
CTACTTTCCAAAATACGTGATGCAGTAGTTAGTATAGTTGAGCTGTCAAT
ACTCGCCTCGTAACCCAGTCGGTGATCGCGGTTGCGACAAGCGCGCGACC
TTGATTCTTGCCGTCCCTTGAGTAAGCATCAATATATATTCGCCGCAGCA
CAGAATGGACCAGACTTCCACAGTTCTGGATGAGGGGTGGGGGCTATCCG
GACAGGAGAGTTGATCTCGCGGGCTTGTACCCCCCTCTCACGTTCGTGCC
GTTTGTAATTCGTACAACGTCCATCACGTCACGCTCCCGATGCACGCAGA
AAACAGGCAAGGCGGAGGCGCCGACTGTTGCGCAGATGCAGAAGGTGATG
GATGTGGTAAGCGATTCTATCGCTAAGGACCTGCCGTGCTTTCGGCTCAG
CATGCCGCGATGCGACGCGGAGAAGTCCTATGGGTTCGCCATGTGAGGAA
CCGCACTCACGCGGCGCGAGAAATTAACCTGGTGTTTTGGGGCGCAGCCT
CGAGAAGCAGTGCGAACGTGAAAGGAGATGGTGAACTGCCCTTAGTTTGT
CATTGTCCCCATGCCCTCGAAAAAATGTCGGTCCTCGTCACCAGAGCTAC
GGGCTCTGGTGATCTCTGCTGTTGTGACGGAAATCGTGTTGCTTAGTCTG
ATAGTCTGTTCGACGCCGATTTCAGGGGTAGGGCATGAGGGCAAAAATTT
GGAAGGCAAAAGTCTTGGAAAGCCAGCCTTGATACCGCGGTTTAGTAGCC
GGTCTTCTCGCAGCCCGTATTGTGTGTGCTCATTCCTTGTTCCCTGATAC
AGTGCATGACGTCATTCGCGATGAATTCGATCCCCGCCGGGGGCGGACGG
CAGGTACGACGTTGTGGAACCGCCCGCTGATGTCTCGGAGCTAAGCCTGT
TGTATATCGAGGGGCTCGTGCTGCACAGCCAGCTCTACCCCTGCTTATCA
TCGACAAGGGGCGTGGGGAAGGTGGCTGTCACAAAGGTAGGAGAGTAAAG
GAGCGACAAGGAAGAAGCTGATTCACGGCATGCGATTGCTCTTGAACTTC
CTCGTTTTCCGCGGCGTGTGCTCCGGTTGTTACTGTGCCATTTTTTTTGT
CGCGCACGGTGAATCATGGGAATTCAAACTCTGCTCTTGATGTAACGCCG
CGCTCGAGCTGAGGTATGGCAAGCGAGTGATATTTCGAAGTCTTCGCGAA
TGAACTGCGCCACAGCCCGTATCACGCTTCCGCCGTCGAGAGCCAGACAC
GCCGCTGCTTCTCGCGACGATTGTATCTGCGTTAAAGAAAATGTTGTGAT
TTTTATACTTGTTCAGCACGCTCTGTATCTTAGTACCGTTATCGATTTCC
CCAAAGCATGGTTTGATCACCGTCTGGCCAACGCTGGCCTCAGATGATGA
AGTCGATGGAGCCTATGACAGCGCTCCCGAAGAGCGGCGTCATGTCCCAC
TGTAACACCGGCACCGAAATGACGTCACGGCGTTGTGTATTTCCAGTGGT
AAGTCCTGACAGCGTCCGTGCCCTGCCTTCTCCGCAGCAAAAATTCCGCT
CCAACAAGCAAGAGCTGGAAGTTGTATTTGACGTCGAACCCACGGAAAAC
CTGGGGACAGAAGATCCGCCGCAATGCCCGCCTCCCGCGATCGACTCCGT
CGCTGCGCTCAACGCGGCGGAGATTCGAGTTTCTTCGGAGGGTGGCTCAG
ACGGTGCTGCCAGGGATAGAGACGAGGCCAACGACGGGGGAGATCGATCA
CAGAAGGTCACGCCTTGGGAGGTGGAGGTGAGCTGGGCTGCTACCATTAT
GCCGGTCGCCCATACCGTTTGTCGACGGCCTAACAAAGCCCCCACAGTTT
CGTGGACAAGTGGGCGTTTTGTATCGAATGTTTTGATGTTTTCCGCTACG
CTTATTTGCACCGTTGGGTGTGCCGATGACAATCGCCAGCTGTGGCCACG
CTACGCTTCGCCCGGACCCATTTTCGAAAACGCCTTGGAAACCTGAAGAA
GTACGTCCCCTGAATGATAGGCGGACGGCGAGGTCGACTACGAGAAGCTG
GTCAAGTCGTTTGGCTCGTCGCTCATCACGGAGGACATTGTGGCGAGAGT
TGAGCGGGTGACGGGCATGCGGGCCCACCGATTTTTGAGGAGAGGCCTTT
TCTTCTCCCACAGAGACTTGACCCAGGTGAGGGCCGTCGCTCTCTTTTCT
CTCTGGTTATTGAGGCCATTGATACCGTTGATGCACGAGATTCGTAAAAT
CAAGAAGAACCCCCCCCCCTCCCCCGCCTCCGCCTCCACACACACACAAA
CGTTGGGAGGATCAATGCGAGTAGCCTATAATGACTATGACGACAGGGCC
GGATTGCGTGGTTATGTGCATCTTAATAAATACACACACAAATGCACATC
CCCACTTGGTGGTGTTGAAATATATATCACCAACAATTGTTGGGGGGGAA
TGGCACCATCTGACACTGTAACGAAATGAGACGTGGGAGGGCGGGGAGGC
TGGGGGGTTGTCTTTGATTTTTTACAGCTTTCTTTGTGGTATGAATTGTA
TCATACCATACCGTACACCATATACCACCGTTGGTAGTGTGGTATGGAAA
ATGGTATGCTTAGAGACTCTGAGGTTTGAGTGGTGCGGAGAGCATGTCAG
ATGGGCGGGAAATCCGACAACCGGATACACTTACTTGCCTTGAGAGAAGC
AGGCAGAGTCGCCTTCTGAAAAGAGTGCACATGGGCTGGATACATACGAA
GAAAAAATAGCTTCCACGTCTCATCTACGGTATGTTTTTTATGTGCACAC
TGAAAACAAATCCTGTTAAAACGAGCCCCGTTGTTTTTGCCGTCCTTCAT
CCAAAAGGCCATGAAGGCAGGCGCCCTCGCGCAACAGGAGGTTAGATAAG
CTTCAATGGTGATGCCTGGGTGCCTGACCGACGGGCGTCTTTCCTGTCCC
CTTTGTTCCCTCCTCCTCCTCGCTTCATTTCCTCCTTGGTGTTCTCCTCG
AGAAAGATCCTGGATTTTTACGAGGCGGGCAAGAAGTTTTACCTGTACAC
GGGGAGGGGTCCCTCGTCCGACTCGCTGCATCTGGGACACCTCATCCCGT
TCCACTTCACCAAATACCTTCAGGCAAGAAACAGTTCTTGGATGAGACGC
TTTCTCGTGTGTGTGTGTGCTGCTGCTGCTAAACGCCCTTGATTTGGTTT
TGCTCCTCTTCCGCGGTAGTGCCGGTGTAAAACGGGGGTGTAGATACTCT
GCTGTAAATATTCTCGTAGAGGGGGAGGCAGGGGGGGGGGGGCTACGGTA
CGGTAATTGATGGGGTGCTTCTTGGCGGCTGTTGTACCTGGTGGCTTCAA
TTCTTCGGCGCTGTTTCTTTTGCCTGAGGGTGCTGATTAGTATGTTCTTC
TGGGGCCCGTGTTTCGTACCAGCGTCGCACCGCGATCGCCGTCCGCTCGA
GAACCCAAACGACTGGCCCACGACTGTGCCCGCACCCGGGGGGGGGGGGT
TGTTTGTTTGCGGTACCGCTACACAAGAGGGTAGAGGGGCAGAGGAAGCG
TTTTCGTCTTTGCCACTCTTCGTTCGCACCCTGGTATTTACGCGACAAAC
CGCCGCCGACTGTAGCCCGCCTTTATATATATATATGTGTGTGTGTGTGT
GTTTGGGGGTATGCATGCGTGTGTGCGAATTATATTTCGACGTTACTTGC
TCCTCCAGGAAGCATTCAAGGTGCCGCTGGTGGTGCAGCTGACGGACGAC
GAGAAGTTCCTCTTTAAGCCTGACCTCAAGCTCGAAGAGGTACCTTATAT
TGCATCCAAGTAATTGTATGACCGTAAAGCTGGTAACAGGGTATTCCAAC
GCCCCCTCCCCGATGGATGAAAGACGAGCGTTCCCGTGATGTTTTTTTGC
GCACCACGAGGAGTGAAGACACTGGTAGCGTGTGTTTTGGGGAACGACCT
CAACGAAATGTTCGCGGAAATTCCAGTATTTTGTGTAACTACTTGCCTAC
ACTAATACCATGTGTCCCGTATGTAGGAGGGGAGAAGATGTCCTTCCCCT
TGGTATACGGTATATACCCTTGTCACATATATGATACTTCATGCAGTAAG
CCTCTCTTGAAGCACGCCTCCGTACTCCGAACTCCCAAAAAAGAAAGCAG
CACGGTTTGGTCGCAGCGGTTAGCGCTGGGCTTTGAACAAAATTTTGGCG
GAAAACGTGCGCACGTAGGGCGTGCTATGCGGTATATAGACTATACTGTC
GAATTTTGTCTGCTGCGTGCGGGAAACTATCCAAGTGTTGTGCTTTGTGG
GTCTTCGACTTCGAATGGGCTCATCCGACGCTATTTCGCCGAAAATTGTA
CTGCGCTGGCGTTCCTCACCACTTGTCGGAAACCCCGTCGCCGTGTTTAT
GATGAAATAAATAATTTTAAAAGTATTACGCCCTCAAGCATGGCTCGCAT
GGCACTCGCGACCGGGGAAGCTGTAGCTTTACCGTCACCCTTGTGCCCTA
TGTTGCCAGTGTCATCGGCTTGCCTTCGAGAACGCGAAGGACATAATCGC
TTGCGGCTTCAACCAGGAGTCGACGTTCATCTTCAGCGATCTAGACTACA
TCCAGCAAATGTACCCTGTTGTCTTGAAGATCCAAAAGTGAGTATGTGTA
GAGGGGAGCGCACCAAAGTATCGGCAACACCTCGCGAGTCGTTCAACAGT
AAGGATGAGGGGGGGTATGTTCCGAATCTGTCCCCTGAGTTCAGGGAGGG
CGGTATAAAAACATATTCTTTTATGTGGATAATTGAGAAAAAGTCCATAT
GGAATGGATATTTCGGGAAAGATACTATAAACAATATTGCCGGGTAGGGA
GGATTTGTAGCTCTATCGCCGCCCGCTTTAGTTGAACACATCACACACCA
CGCAAGACCCTTACACGCGACGGCGCGGCGCGGAGGGATCTTTGCACGCC
TGATCGGTGGCTTATTTGTCTCCGTGGTTGGTGTTGCTTTTTTATTATAT
TGGCTGCGTTGGGTTGGGGTGGGAGGCGAAAGGTGGAGCATATTGTTGGT
TCGGCGTGTTGGGATATCCTTTTCTGTGCTGCTCCCCGCTTGAGACCACG
GCGATCAGTAGCCGTGTCGGTCAGTCGGTAGGTTGATTATCCACCAAATC
TGGTGGGGGAGCACAGATCCTTGGACATGTTACCCTCGCATACAATGGCG
CTGCGACTAGCTCGTTATAAACATCACCCTATCCTACCCTATTAATACCC
TACCCGCGCCTGTCTCTTGTCCGTGGAACCGTATGAAATAGGCTGGTGAC
GCACAACCAAGACCGGGGCATCTTAGGCTTTACGGAAAGCCACAATATCG
GGTACAAGTCCTTCCACGCAGTACAAGCC
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Coding sequence (CDS) from alignment at H-elongata_contig16776:977..7555+

>mRNA_H-elongata_contig16776.4228.1 ID=mRNA_H-elongata_contig16776.4228.1|Name=mRNA_H-elongata_contig16776.4228.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2478bp|location=Sequence derived from alignment at H-elongata_contig16776:977..7555+ (Himanthalia elongata Himel1 dioecious)
ATGGCGGCCATAGATCCGAGAACCCCTACCATGACCACGGCGCTTGAGAT
CGTCAAAGGAGCGCTAGCTGCGGTTTTAGGCTTCCCCGTGGGAAAGTCTA
CCGTCGGGAGCCGTATCATTGAGGGCAACAAAGCGCGCATCACCGTGATG
GCGGCCATAGATCCGAGAACCCCTACCATGACCACGGCGCTTGAGATCGT
CAAAGGAGCGCTAGCTGCGGTTTTAGGCTTCCCCGTGGGAAAGTCTACCG
TCGGGAGCCGTATCATTGAGGGCAACAAAGCGCGCATCACCGTGAAAACA
GGCAAGGCGGAGGCGCCGACTGTTGCGCAGATGCAGAAGGTGATGGATGT
GGTAAGCGATTCTATCGCTAAGGACCTGCCGTGCTTTCGGCTCAGCATGC
CGCGATGCGACGCGGAGAAGTCCTATGGGTTCGCCATAAAACAGGCAAGG
CGGAGGCGCCGACTGTTGCGCAGATGCAGAAGGTGATGGATGTGGTAAGC
GATTCTATCGCTAAGGACCTGCCGTGCTTTCGGCTCAGCATGCCGCGATG
CGACGCGGAGAAGTCCTATGGGTTCGCCATGTACGACGTTGTGGAACCGC
CCGCTGATGTCTCGGAGCTAAGCCTGTTGTATATCGAGGGGCTCGTGCTG
CACAGCCAGCTCTACCCCTGCTTATCATCGACAAGGGGCGTGGGGAAGGT
GGCTGTCACAAAGGTACGACGTTGTGGAACCGCCCGCTGATGTCTCGGAG
CTAAGCCTGTTGTATATCGAGGGGCTCGTGCTGCACAGCCAGCTCTACCC
CTGCTTATCATCGACAAGGGGCGTGGGGAAGGTGGCTGTCACAAAGCAAA
AATTCCGCTCCAACAAGCAAGAGCTGGAAGTTGTATTTGACGTCGAACCC
ACGGAAAACCTGGGGACAGAAGATCCGCCGCAATGCCCGCCTCCCGCGAT
CGACTCCGTCGCTGCGCTCAACGCGGCGGAGATTCGAGTTTCTTCGGAGG
GTGGCTCAGACGGTGCTGCCAGGGATAGAGACGAGGCCAACGACGGGGGA
GATCGATCACAGAAGGTCACGCCTTGGGAGGTGGAGCAAAAATTCCGCTC
CAACAAGCAAGAGCTGGAAGTTGTATTTGACGTCGAACCCACGGAAAACC
TGGGGACAGAAGATCCGCCGCAATGCCCGCCTCCCGCGATCGACTCCGTC
GCTGCGCTCAACGCGGCGGAGATTCGAGTTTCTTCGGAGGGTGGCTCAGA
CGGTGCTGCCAGGGATAGAGACGAGGCCAACGACGGGGGAGATCGATCAC
AGAAGGTCACGCCTTGGGAGGTGGAGGCGGACGGCGAGGTCGACTACGAG
AAGCTGGTCAAGTCGTTTGGCTCGTCGCTCATCACGGAGGACATTGTGGC
GAGAGTTGAGCGGGTGACGGGCATGCGGGCCCACCGATTTTTGAGGAGAG
GCCTTTTCTTCTCCCACAGAGACTTGACCCAGGCGGACGGCGAGGTCGAC
TACGAGAAGCTGGTCAAGTCGTTTGGCTCGTCGCTCATCACGGAGGACAT
TGTGGCGAGAGTTGAGCGGGTGACGGGCATGCGGGCCCACCGATTTTTGA
GGAGAGGCCTTTTCTTCTCCCACAGAGACTTGACCCAGATCCTGGATTTT
TACGAGGCGGGCAAGAAGTTTTACCTGTACACGGGGAGGGGTCCCTCGTC
CGACTCGCTGCATCTGGGACACCTCATCCCGTTCCACTTCACCAAATACC
TTCAGGCAAGAAACAATCCTGGATTTTTACGAGGCGGGCAAGAAGTTTTA
CCTGTACACGGGGAGGGGTCCCTCGTCCGACTCGCTGCATCTGGGACACC
TCATCCCGTTCCACTTCACCAAATACCTTCAGGCAAGAAACACATTCAAG
GTGCCGCTGGTGGTGCAGCTGACGGACGACGAGAAGTTCCTCTTTAAGCC
TGACCTCAAGCTCGAAGAGCATTCAAGGTGCCGCTGGTGGTGCAGCTGAC
GGACGACGAGAAGTTCCTCTTTAAGCCTGACCTCAAGCTCGAAGAGTGTC
ATCGGCTTGCCTTCGAGAACGCGAAGGACATAATCGCTTGCGGCTTCAAC
CAGGAGTCGACGTTCATCTTCAGCGATCTAGACTACATCCAGCAAATGTA
CCCTGTTGTCTTGAAGATCCAAAATGTCATCGGCTTGCCTTCGAGAACGC
GAAGGACATAATCGCTTGCGGCTTCAACCAGGAGTCGACGTTCATCTTCA
GCGATCTAGACTACATCCAGCAAATGTACCCTGTTGTCTTGAAGATCCAA
AAGCTGGTGACGCACAACCAAGACCGGGGCATCTTAGGCTTTACGGAAAG
CCACAATATCGGGTACAAGTCCTTCCACGCAGTACAAGCCGCTGGTGACG
CACAACCAAGACCGGGGCATCTTAGGCTTTACGGAAAGCCACAATATCGG
GTACAAGTCCTTCCACGCAGTACAAGCC
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