mRNA_H-elongata_contig167639.4222.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: D8LQH2_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQH2_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.520e-57 Identity = 91/140 (65.00%), Postives = 110/140 (78.57%), Query Frame = 1
Query: 1 VMIYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQLLSFVGGQSQWLFDPSVYFYNDVASL 420
+MIY LERAIRLMPR SWQYT+VIDCEG +GL+ LP ++YMKK+F++LSH+YPMRLG VLF NVGP+VMLCW++VSPLL RTK KM IPS+ +KYIHPSQLLSF GG+S W +DP+VYF +D ASL
Sbjct: 287 LMIYNLERAIRLMPRNSWQYTIVIDCEG---------MGLKQLPPVTYMKKMFKLLSHHYPMRLGHVLFTNVGPSVMLCWKVVSPLLQARTKAKMHLIPSTALGQTAKYIHPSQLLSFAGGKSTWQYDPAVYFSSDAASL 417
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: A0A835ZL56_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL56_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.120e-27 Identity = 53/131 (40.46%), Postives = 82/131 (62.60%), Query Frame = 1
Query: 7 IYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQLLSFVGGQSQWLFDPSVYF 399
+YT+ERA R RG YT+V DC G GL +LP + +++ +F MLS +YPMRLG +L N +V LCWR+ SP++ RTK+K++F RA++++Y+ P++L +GG S + +D + YF
Sbjct: 101 VYTVERAWRARARGVEAYTIVADCRG---------FGLTHLPPLPFLRAMFGMLSRHYPMRLGHILLCNASASVHLCWRVCSPIVPPRTKDKIVFAREGDRALVARYVAPAELPRALGGASAYEYDAARYF 222
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: A0A7S2XX21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX21_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.470e-19 Identity = 49/125 (39.20%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 1 VMIYTLERAIRLMP--RGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAI-ISKYIHPSQLLSFVGGQ 366
+++YTLERAI+ M RG ++ V++DC G G SR P IS + F+ L HNYPMRLG V VN G + + W++VSP+L++RT++K+ F+ + + I +Y++P L GG+
Sbjct: 54 LLVYTLERAIKSMDSKRGVEKFIVLVDCTGFGLSRA---------PPISLVTGQFKTLMHNYPMRLGKVFVVNAGTPMNMLWKIVSPILNERTRHKVFFLSEKEISQHIPQYVNPDVLEVEFGGK 169
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: UPI000867B36A (CRAL/TRIO domain-containing protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867B36A) HSP 1 Score: 66.2 bits (160), Expect = 5.070e-10 Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 1
Query: 4 MIYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQLLSFVGGQSQWLFDPSVYF 399
+++ LERAI +MPRG ++I+ +G GSS PS+S K++ +L +YP RLG L +NV V ++L++P + T+ KM+F A + ++ PSQL GG ++ + Y+
Sbjct: 193 LVWGLERAIDMMPRGVENLALLINFKGSGSS---------TTPSLSQGKQVMSILQTHYPERLGRALIINVPFFVNGFFKLITPFIDPNTREKMVF-----NADLRNHVPPSQLDRNFGGDCEFEYVHGDYW 310
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: A0A0E9NRI8_SAICN (CRAL-TRIO domain-containing protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NRI8_SAICN) HSP 1 Score: 66.2 bits (160), Expect = 5.750e-10 Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 1
Query: 4 MIYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQLLSFVGGQSQWLFDPSVYF 399
+++ LERAI +MPRG ++I+ +G GSS PS+S K++ +L +YP RLG L +NV V ++L++P + T+ KM+F A + ++ PSQL GG ++ + Y+
Sbjct: 193 LVWGLERAIDMMPRGVENLALLINFKGSGSS---------TTPSLSQGKQVMSILQTHYPERLGRALIINVPFFVNGFFKLITPFIDPNTREKMVF-----NADLRNHVPPSQLDRNFGGDCEFEYVHGDYW 310
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: A0A7S2D6C1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6C1_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.760e-9 Identity = 37/122 (30.33%), Postives = 64/122 (52.46%), Query Frame = 1
Query: 10 YTLERAI-RLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRA-IISKYIHPSQLLS-FVGGQ 366
Y LE A+ R G QYT ++D G+ +P + +K F +++ +YP+R G+ V+ G + L WR++ P++ +RT+ K+ + + A I++ I PSQL F GG+
Sbjct: 1 YNLETALARGAEAGLDQYTFIVDLHNTGA-----------MPPLKTVKASFEIMARHYPLRQGNTFLVHGGSMISLLWRILEPVIPERTRAKVRIVSEKEEAEILTSLIAPSQLEKRFKGGE 111
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: I2FT99_USTH4 (Related to PDR16-protein involved in lipid biosynthesis and multidrug resistance / PHO13-4-nitrophenylphosphatase n=2 Tax=Ustilago TaxID=5269 RepID=I2FT99_USTH4) HSP 1 Score: 62.4 bits (150), Expect = 1.340e-8 Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 4 MIYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQL-LSFVGGQSQWLFDPSVYF 399
++YTLERAI +MP+G Y +VID + S PS+S + + +L ++Y RLG VNV + + V+P L TK K+ F A +++Y+ QL F GG+ + +D Y+
Sbjct: 178 LVYTLERAIDMMPQGVENYAIVIDYKSATSQSN---------PSLSTARTVANILQNHYVERLGKAFIVNVPWFINAFFSAVTPFLDPVTKEKIKF-----NANLTEYVPKEQLDAEFAGGRYNYEWDFKTYW 296
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: A0A1Y1XZ57_9FUNG (CRAL/TRIO domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XZ57_9FUNG) HSP 1 Score: 61.2 bits (147), Expect = 2.060e-8 Identity = 35/131 (26.72%), Postives = 69/131 (52.67%), Query Frame = 1
Query: 7 IYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQLLSFVGGQSQWLFDPSVYF 399
I+T+E+AI+L+P G+ Q+ ++ID +G ++ P +S ++ +L +YP RLG ++ ++LVSP + T+NK+ F+ K + + + + +GG+ + +D SVY+
Sbjct: 142 IFTIEKAIQLLPPGAEQFCLLIDYKGASMAKN---------PPLSQAAELLSILHAHYPERLGLAYLIDTPWYFSGFFKLVSPFIDPVTRNKINFVDRKKAEQMGEKLDMDYVEQHIGGKFDFEYDHSVYW 263
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: G0SHD5_CHATD (Putative phosphatidylinositol transporter protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0SHD5_CHATD) HSP 1 Score: 61.6 bits (148), Expect = 2.180e-8 Identity = 36/133 (27.07%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 4 MIYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQLLS-FVGGQSQWLFDPSVYF 399
++Y +ER I LMP G ++I+ + + T P +S +++ +L H+YP RLG L +N+ V ++L++P + RT+ K+ F +S+Y+ P Q+ + F G ++ ++ +VY+
Sbjct: 146 LVYMVERVIDLMPAGQETLALLINFKQSKTRSNTT-------PGMSLAREVLHILQHHYPERLGRALIINMPWFVTTFFKLITPFIDPRTREKLKFNED-----MSQYVPPEQMWNEFSTGMLEFEYEHAVYW 266
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Match: W3VUR6_PSEA5 (CRAL-TRIO domain-containing protein n=3 Tax=Moesziomyces TaxID=63261 RepID=W3VUR6_PSEA5) HSP 1 Score: 60.5 bits (145), Expect = 6.260e-8 Identity = 41/132 (31.06%), Postives = 65/132 (49.24%), Query Frame = 1
Query: 4 MIYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKIFRMLSHNYPMRLGDVLFVNVGPTVMLCWRLVSPLLHQRTKNKMMFIPSSKRAIISKYIHPSQLLSFVGGQSQWLFDPSVYF 399
++YTLERAI LMP G Y +VID G S PS+S + + +L ++Y RLG +NV + + ++P L TK K+ F A +++++ QL GG+ + +D VY+
Sbjct: 173 LVYTLERAIDLMPEGVENYAIVIDYRGATSQSN---------PSLSTARAVANILQNHYVERLGRAFVMNVPWFLNAFFTAITPFLDPITKEKIRF-----NANLAEFVPAEQLDVEFGGRYNYEWDFDVYW 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167639.4222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig167639.4222.1 >prot_H-elongata_contig167639.4222.1 ID=prot_H-elongata_contig167639.4222.1|Name=mRNA_H-elongata_contig167639.4222.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp MIYTLERAIRLMPRGSWQYTVVIDCEGEGSSRETAWLGLRNLPSISYMKKback to top mRNA from alignment at H-elongata_contig167639:5..1051+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig167639.4222.1 ID=mRNA_H-elongata_contig167639.4222.1|Name=mRNA_H-elongata_contig167639.4222.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1047bp|location=Sequence derived from alignment at H-elongata_contig167639:5..1051+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig167639:5..1051+ >mRNA_H-elongata_contig167639.4222.1 ID=mRNA_H-elongata_contig167639.4222.1|Name=mRNA_H-elongata_contig167639.4222.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=840bp|location=Sequence derived from alignment at H-elongata_contig167639:5..1051+ (Himanthalia elongata Himel1 dioecious)back to top |