mRNA_H-elongata_contig167491.4209.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 226 bits (576), Expect = 6.850e-65 Identity = 136/359 (37.88%), Postives = 202/359 (56.27%), Query Frame = 1
Query: 4 VELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQ--VGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILH--GVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGV--TKTSTIPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITYGGEPGGNQVIS-VDRRRLRH---LPGYASLSVG 1050
VE PK ++G++ VF+ K + + IE YK RLVAQGF QV GI + E+ P ASI ++L++ WE Q++V AYL D+EE IY++ P + K+ V LK+ +YGL +G + K+ EL + G RS+ D CVF W+ + V++++IA+ VDD +A TK R++ + F ++DLG++ + LG + RDR+ TL QH YI + RF + K+ T P G LS P T QFE+M+ IPY+ ++G+LM+AA TRPDI++A L +F NPG HW A++ +YL TR+ +T+G G + S D H + GY L G
Sbjct: 147 VEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGT-VLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSAEHRHSISGYVFLLDG 502
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A4V1T029_9SPHI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4V1T029_9SPHI) HSP 1 Score: 219 bits (558), Expect = 1.210e-64 Identity = 121/322 (37.58%), Postives = 191/322 (59.32%), Query Frame = 1
Query: 10 LPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQ--VGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGVTKTST--IPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITY 963
+P+G +G + VFK K+D +G IE++K RLVA+GF Q G+ Y+E+ P + S+R+V++M+ E Q++V A+L +++E ++++ PE + K+ V LKK++YGL A W +F + + GF+ + D C++ I G +++ +YVDD+L+A+ Q L F + D+G+ SY +G I+RDR+ G L Q YI V ERF + K S +P G K S + P+ + + ++M QIPY +IVG+LM+A T TRP ISFA LG++ NPG HW+ A+K L+YL T+D +TY
Sbjct: 1 MPEGCKRVGCKWVFKTKLDSNGNIERHKARLVAKGFTQKDGVDYKETFSPVSKKDSLRIVMAMVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFVVDGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVTSFGFKENIVDRCIYLKI-SGSKFIILVLYVDDILLATNDLGLLRQTKEFLSKNFEMKDMGEASYVIGIEISRDRSQGWLGLSQKAYINKVLERFKMDKCSAGIVPIQKGDK-FSLNQCPKNELERKQMEQIPYASIVGSLMYAQTCTRPGISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDRMLTY 320
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS) HSP 1 Score: 219 bits (559), Expect = 8.330e-64 Identity = 125/354 (35.31%), Postives = 190/354 (53.67%), Query Frame = 1
Query: 7 ELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQVGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGVTKTSTIPSAAGKKALSKSNSPQTDAQFEEMRQIP-YKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITYGGEPGGNQVISVDRRRLRHLPGYASLSVGRGGDD 1065
+LP G+ +G + VF K D+DG I +YK RLVAQG+ Q+ G+ Y E+ P S+ L + E Q++V AYL ++EE IY+ PE Y D +V L+K +YGL +G W +F +L + GF + +AD CV++ I G + + I V+VDDLL+ S T D + +L + F + DLG+ +G I RDR GT+ Q QYI+ V RFG+ + + + K +TD + + Y++++G+L++AA TRPDIS A +LG+F NPGP HW ++ +YL TR+L + + G ++IS GY+ S DD
Sbjct: 8 DLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMTI-ITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNVILKK---RTDDLIADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEG-EIIST---------GYSDASFASNPDD 347
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A4S4K4Q2_9APHY (Uncharacterized protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K4Q2_9APHY) HSP 1 Score: 230 bits (586), Expect = 8.670e-64 Identity = 144/360 (40.00%), Postives = 199/360 (55.28%), Query Frame = 1
Query: 1 VVELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEA--DVEENIYVELPEAY--RDSRKQVGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGVT--KTSTIPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITYGGEPGGNQ-VISVDRRRLRH---LPGYASLSVG 1050
VVE P G V+G++ V + K D G I+KYK RLVAQGF QV G+ Y E+ P ASIR+VL++ GWE + + N AYL + D +E IY+E P + +D + V LKKA+YGL G W + I L GF+R++AD VF + G +V++A++VDD ++ + Q R L + + DLG VS+ LG +TRD A TL QH YI ++ RF T K S+IP + L KS P + MR+IPY+ +G+LM+AA TRPDISFA L +F+ NPG HW ++ +YL T+ L + YGG G Q + D H + GY L G
Sbjct: 997 VVERPLGVNVVGSKWVLRIKKDATGAIDKYKARLVAQGFTQVYGVDYFETFAPVAKIASIRLVLAIAARNGWEVQSFDFNSAYLNSVLDDDEEIYLEQPPQFSLKDPKLHVLRLKKALYGLKQGGRKWYEHLCIALADLGFKRAEADYGVF-YAKVGESLVLLAIHVDDCIITGNSSTLISQYKRQLGDKYSLTDLGPVSWLLGIKVTRDLEARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNIQFL-KSQCPTSLIDIARMRKIPYREAIGSLMYAAVGTRPDISFAVSTLAQFSHNPGWIHWEAVKRVFRYLLGTKMLVLQYGGVQQGLQGYVDADGASQEHRHAISGYVFLVDG 1354
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH) HSP 1 Score: 219 bits (559), Expect = 3.190e-63 Identity = 121/324 (37.35%), Postives = 189/324 (58.33%), Query Frame = 1
Query: 4 VELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQ--VGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGVTKTST--IPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITY 963
VELP+G +G + VFK K D +G IE+YK RLVA+GF Q +GI Y+E+ P + S+R++++++ E Q++V A+L ++EE +++ PE + K+ V LKK++YGL A W +F + + GF+ + D C++ + G + + +YVDD+L+AS+ + L F + D+G+ SY +G I RDR+ G L Q YI+ V ERFG+ K S P G K S PQ + + + M +IPY + VG+L++A T TRPDISFA LG++ NPG HW+ +K ++YL T++ +TY
Sbjct: 52 VELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSPSIAPIQKGDK-FSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQGTKEYMLTY 373
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 227 bits (579), Expect = 7.380e-63 Identity = 138/359 (38.44%), Postives = 202/359 (56.27%), Query Frame = 1
Query: 4 VELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQ--VGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILH--GVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGV--TKTSTIPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITYGGEPGGNQVIS-VDRRRLRH---LPGYASLSVG 1050
VE PK ++G++ VF+ K + +G IE YK RLVAQGF QV GI + E+ P ASIR++L++ WE Q++V AYL D+EE IY+ P + K+ V LK+ +YGL +G + K+ EL + G RS+ D CVF W+ + V++++IA+ VDD +A TK R++ + F ++DLG++ + LG + RDR+A TL Q YI + RF + K+ T P G LS P T QFE+M+ IPY+ +G+LM+AA TRPDI++A L +F NPG HW A++ +YL TR+ +T+G G + S D H + GY L G
Sbjct: 957 VEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGT-VLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSAEHRHSISGYVFLLDG 1312
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 227 bits (578), Expect = 1.010e-62 Identity = 136/359 (37.88%), Postives = 201/359 (55.99%), Query Frame = 1
Query: 4 VELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEA--DVEENIYVELPE--AYRDSRKQVGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGVT--KTSTIPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITYGGEPGGNQ-VISVDRRRLRH---LPGYASLSVG 1050
V+ P V+G++ V + K D G I+KYK RLVAQGF Q+ GI Y E+ P +SIR++L++ GW+ + + N AYL + D +E IY+E P A +D + V L+KA+YGL G W + I L GF R+++D VF + + + V+A++VDD + ++ + R + +P+ DLG+VS+ LG + RDR A TL QH YI ++ RF T K S+IP + L+KS P + A MR+IPY+ +G+LM+AA TRPDISFA L +F+ NPG THW ++ +YL T++L + YGG G + + D H + GY L G
Sbjct: 998 VDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVF-FAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQEHRHAITGYVFLVDG 1354
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A251UJK4_HELAN (Putative zinc finger, CCHC-type n=7 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UJK4_HELAN) HSP 1 Score: 226 bits (577), Expect = 1.100e-62 Identity = 121/324 (37.35%), Postives = 191/324 (58.95%), Query Frame = 1
Query: 4 VELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQ--VGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGVT--KTSTIPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITY 963
VELP G +G + VFK K+D +G +E+YK RLVA+G+ Q +GI Y+E+ P + S+R+V++++ E Q++V A+L D++E++Y++ PE ++ ++ V LKK++YGL A W +F ++ +GF ++Q D C + + G ++ +YVDD+L+AS + ++ R L F + DLG SY +G I RDR+ G L Q YI V R+ + K S P G P T+ + E+M QIPY ++VG+LM+A TRPDI++ A LG++ NPG HW+ A+K L+YL T+D +TY
Sbjct: 830 VELPNGVKPVGCKWVFKTKLDPNGNVERYKARLVAKGYTQKEGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLDEDVYMKQPEGFKPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKRQGFMKNQVDQCTYLK-MSGSDFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGDASYVIGIEIHRDRHKGILGLSQKAYIDRVLTRYNMQQCKPSVAPVVKGD-VFGSFQCPTTEVEKEQMSQIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDYKLTY 1151
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A438CL20_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CL20_VITVI) HSP 1 Score: 224 bits (570), Expect = 9.530e-62 Identity = 123/324 (37.96%), Postives = 189/324 (58.33%), Query Frame = 1
Query: 4 VELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQ--VGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGV--TKTSTIPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITY 963
VELP G +G + VFK K D G+IE+YK RLV +G+ Q +GI ++E+ P + S R++++++ E Q++V A+L D++E +Y+E P + + K+ V L K++YGL A W +F + GF+ + D C++ + G + + +YVDD+L+AS + L + F + DLG+ SY LG I RDR G LK Q YI+ + +RF + K++ P G K SK+ PQ D + EEM+ IPY ++VG+LM+A TRPDI+F LG++ NPG HW+ A+K L+YL T+DL +TY
Sbjct: 808 VELPHGCKPVGCKWVFKTKRDSSGKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFDLELHQMDVKTAFLNGDLDEEVYMEQPIGFVEVGKEDLVCKLNKSIYGLKQASRQWYLKFDKIITQNGFKENTVDRCIYLRV-SGSSYIFLVLYVDDILLASNDPDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRAYIERILKRFNMHNCKSTKAPIVKGDK-FSKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRYLSNPGSQHWKAAKKVLRYLQGTKDLMLTY 1129
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Match: A0A445LQ30_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445LQ30_GLYSO) HSP 1 Score: 223 bits (569), Expect = 1.630e-61 Identity = 125/324 (38.58%), Postives = 191/324 (58.95%), Query Frame = 1
Query: 4 VELPKGKTVLGTRLVFKCKIDKDGRIEKYKCRLVAQGFRQVKGIQYEESSYPTPAQASIRMVLSMIVALGWEARQLNVNMAYLEADVEENIYVELPEAYRDSRKQ--VGILKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRWILHGVVVVVIAVYVDDLLVASATKRDEEQAARDLCS*FPINDLGKVSYYLGCHITRDRNAGTLKFEQHQYIQNVAERFGVTKTST--IPSAAGKKALSKSNSPQTDAQFEEMRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALQYLWRTRDLGITY 963
VELPKG +G + VFK K D G +E+YK RLVA+GF Q GI Y+E+ P + S R++++++ E Q++V A+L D+EE++Y++ P + K+ V LKK++YGL A W +F + + GF+ + D CV+ + G V+ + +YVDD+L+A+ + + L S F + D+G+ SY +G I R+R+ G L Q YI V ERF + K S +P G K S + P+ D + ++M IPY ++VG++M+A T TRPDISFA LG++ NPG HW+ A+K L+YL T+D +TY
Sbjct: 929 VELPKGCKRVGYKWVFKTKRDSHGNLERYKARLVAKGFTQKDGIDYKETFSPVSRKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEDVYMDQPMGFSVEGKEHMVCKLKKSIYGLKQASRQWYLKFNDTIVSFGFKENTVDRCVYLKV-SGSKVMFLVLYVDDILLATNDLGLFHETKKFLSSNFEMKDMGEASYVIGIEIFRNRSQGLLGLSQKAYINKVLERFRMEKCSASPVPIQKGDK-FSLAQCPKNDLERKQMEAIPYASVVGSIMYAQTCTRPDISFATGMLGRYQSNPGMEHWKAAKKVLRYLQGTKDHILTY 1250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167491.4209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig167491.4209.1 >prot_H-elongata_contig167491.4209.1 ID=prot_H-elongata_contig167491.4209.1|Name=mRNA_H-elongata_contig167491.4209.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp MRQIPYKAIVGALMWAATMTRPDISFAAHQLGKFNDNPGPTHWREAQKALback to top mRNA from alignment at H-elongata_contig167491:78..1164- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig167491.4209.1 ID=mRNA_H-elongata_contig167491.4209.1|Name=mRNA_H-elongata_contig167491.4209.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1087bp|location=Sequence derived from alignment at H-elongata_contig167491:78..1164- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig167491:78..1164- >mRNA_H-elongata_contig167491.4209.1 ID=mRNA_H-elongata_contig167491.4209.1|Name=mRNA_H-elongata_contig167491.4209.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at H-elongata_contig167491:78..1164- (Himanthalia elongata Himel1 dioecious)back to top |