mRNA_H-elongata_contig167414.4205.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A6H5JAJ0_9PHAE (OHCU_decarbox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAJ0_9PHAE) HSP 1 Score: 220 bits (560), Expect = 4.570e-71 Identity = 103/134 (76.87%), Postives = 121/134 (90.30%), Query Frame = 1
Query: 1 LRCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAAI 402
LRCCHSNAWADAVL RMPF+SEEEA+AA+D CW+ L+P+ YLEA++AHPAIGDK+ALR+KFAPSRSGWE +EQAA+AGASE VL+ELSELN+ Y KNGFVFL+CA+G PAD ILA LKARLPNDRDTE+R A+
Sbjct: 17 LRCCHSNAWADAVLGRMPFKSEEEAQAAMDDCWAKLSPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDKEQAAAAGASEAVLDELSELNEEYRQKNGFVFLVCASGMPADAILALLKARLPNDRDTEIRNAV 150
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A835YUP2_9STRA (Putative OHCU decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP2_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.470e-35 Identity = 70/133 (52.63%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 1 LRCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
LRCC N WAD VL MPF SE +AR LD CW+ + P +LEA SAHP IG +K SGWE EEQ +A A + VL L E N+ Y DK GFVFLICATGK AD +LA L+AR + TE+ A
Sbjct: 24 LRCCTCNRWADEVLRHMPFSSESQARNTLDACWAAMGPQEWLEAFSAHPRIGAGGGDHKK----PSGWEAEEQKGAATAGQQVLQGLREWNRKYDDKFGFVFLICATGKSADEMLAALRARYHHHASTEMAVA 152
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: UPI00199ADACE (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI00199ADACE) HSP 1 Score: 120 bits (300), Expect = 6.680e-32 Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 4 RCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
RCC ++ W D +L PF ++ A DQ W+ S +LEA + +P IGD+ + R+KFA S + W EQ+ ++ A+E VL LS+ N Y K GF+F++CATGK AD +LA L+ARLPNDR TE++ A
Sbjct: 21 RCCGASHWVDGMLVLRPFSTDTALMKAADQVWAGTGESDWLEAFTHYPKIGDRDSRRQKFA-STAEWASHEQSGASAANEAVLTALSDGNLNYEAKFGFIFIVCATGKSADEMLALLQARLPNDRATELQIA 151
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A136I3N3_9ALTE (OHCU decarboxylase n=1 Tax=Alteromonas sp. Nap_26 TaxID=1795869 RepID=A0A136I3N3_9ALTE) HSP 1 Score: 116 bits (291), Expect = 1.450e-30 Identity = 57/132 (43.18%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 4 RCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
+CC +NAW + +++ P+ S + A+ Q W YLEA AHP IGD +LR+KFA +++ GE Q+ +A AS+ VL+ L E N Y+DK+GF+F+ICATG A+ +L +L+ RLPN D E++ A
Sbjct: 20 QCCAANAWIEKMVSTRPYSSIDALEASAKQAWQSCTNDDYLEAFKAHPMIGDVDSLRKKFANTKAIAAGE-QSGTASASDEVLHALKEANHAYLDKHGFIFIICATGLSAETMLEELQKRLPNSTDEELQNA 150
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A0D8D932_9GAMM (OHCU decarboxylase n=1 Tax=Thalassomonas viridans TaxID=137584 RepID=A0A0D8D932_9GAMM) HSP 1 Score: 115 bits (289), Expect = 3.060e-30 Identity = 60/130 (46.15%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 1 LRCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEV 390
++CC S+AW A++ PF E A DQ W L+ S YLEA HP IGD +LR K+A +++ GE+ A ++ ASE VLN+L+ N Y K GF+F++CATGK A+ +LA L+ARLPN+R E+
Sbjct: 19 MQCCTSSAWVRAMVQSRPFAGETALYQAADQHWQGLSESDYLEAFEGHPKIGDVNSLRAKYANTKALASGEQSAVNS-ASEQVLNDLARGNSDYEAKFGFIFIVCATGKSAEEMLALLQARLPNERAQEL 147
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A2A4TUN7_9BACT (OHCU decarboxylase n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A2A4TUN7_9BACT) HSP 1 Score: 115 bits (287), Expect = 5.350e-30 Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 7 CCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
CC + W D +L R P+ E+ + A + W LNP + EA + HP IGD K LR K W +EQ+ +AGASE + L +LN Y D G++F++CATGKPAD +LA LK+RL +D D E + A
Sbjct: 21 CCGARRWIDGMLMRKPYFDAEDLQTAGREIWELLNPEDWKEAFTHHPRIGDIKILRAK-------WASDEQSGAAGASEETIQSLKKLNDEYFDMFGYIFIVCATGKPADEMLAILKSRLVHDADEEFKIA 144
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A0D8CQQ8_9GAMM (OHCU decarboxylase n=1 Tax=Thalassomonas actiniarum TaxID=485447 RepID=A0A0D8CQQ8_9GAMM) HSP 1 Score: 115 bits (287), Expect = 6.140e-30 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 1 LRCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
++CC ++ W A++ PF E A DQ W L+ S YLEA HP IGD +LR K+A +++ GE+ A + ASE VLN+L++ N Y K GF+F++CATGK A+ +LA L+ARLPN+R E+ A
Sbjct: 19 MQCCTASTWVKAMVQSRPFADEAALYQAADQHWQGLSESDYLEAFEGHPKIGDVNSLRAKYANTKALASGEQSAVNV-ASEQVLNDLAKGNSDYETKFGFIFIVCATGKSAEQMLALLQARLPNERAQELANA 150
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A7S3XGY5_OXYMA (Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XGY5_OXYMA) HSP 1 Score: 114 bits (285), Expect = 9.070e-30 Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 1 LRCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
L CHS+ WA ++AR PFE + + W L +LEA HP IGD ++LR+K+ + EQ+ +GASE V+ L++ NQ Y +KNGF+F++CA+GK A +L L++RLPN RD E++ A
Sbjct: 5 LETCHSSKWAAGMVARRPFEDDAALLKGAQEVWDSLGEEDWLEAFRGHPKIGDAESLRKKYHGNSGALSSVEQSGVSGASEEVIQALAKGNQDYEEKNGFIFIVCASGKSASEMLEILQSRLPNGRDQELQNA 137
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A0G4FQZ7_VITBC (OHCU_decarbox domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FQZ7_VITBC) HSP 1 Score: 114 bits (286), Expect = 9.710e-30 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 1 LRCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
L+CCHS+ WA + PF S +E AA D+ W +L+ +LEA HP IGD LR+KFA + + E E QA + ASE VL L E N Y +NGF+F++CATGK A +LA L+ RL N+R E+ A
Sbjct: 21 LQCCHSSRWAIRMETLRPFASLDELEAAADRIWDNLSEPDWLEAFRGHPKIGDVDQLRQKFAATAAMCENE-QAGARSASEAVLRRLKEGNDQYQGQNGFIFIVCATGKSAGEMLALLEERLKNNRRVELANA 152
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Match: A0A7R7J8H7_9ALTE (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=2 Tax=unclassified Alteromonas TaxID=2614992 RepID=A0A7R7J8H7_9ALTE) HSP 1 Score: 114 bits (285), Expect = 1.170e-29 Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 4 RCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAIGDKKALREKFAPSRSGWEGEEQAASAGASEVVLNELSELNQTYMDKNGFVFLICATGKPADMILAKLKARLPNDRDTEVRAA 399
+CC S W ++ PF ++ A W+ YLEA AHP IGD LREKFA +++ EQ+ +A ASE LNEL E NQ Y+DK+GF+F+ICATG AD++L++L+ RLPN E+ A
Sbjct: 20 QCCASRTWIYSMTNARPFSDLKDIEGAAKTAWAKCAEQDYLEAFRAHPMIGDMNTLREKFANTKA-IAANEQSGTAVASEATLNELKEANQAYLDKHGFIFIICATGLSADVMLSELQKRLPNSTAQEITNA 150 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167414.4205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig167414.4205.1 >prot_H-elongata_contig167414.4205.1 ID=prot_H-elongata_contig167414.4205.1|Name=mRNA_H-elongata_contig167414.4205.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp LRCCHSNAWADAVLARMPFESEEEARAALDQCWSDLNPSGYLEAISAHPAback to top mRNA from alignment at H-elongata_contig167414:4..1227- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig167414.4205.1 ID=mRNA_H-elongata_contig167414.4205.1|Name=mRNA_H-elongata_contig167414.4205.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1224bp|location=Sequence derived from alignment at H-elongata_contig167414:4..1227- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig167414:4..1227- >mRNA_H-elongata_contig167414.4205.1 ID=mRNA_H-elongata_contig167414.4205.1|Name=mRNA_H-elongata_contig167414.4205.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig167414:4..1227- (Himanthalia elongata Himel1 dioecious)back to top |