mRNA_H-elongata_contig16678.4183.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16678.4183.1
Unique NamemRNA_H-elongata_contig16678.4183.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16678.4183.1 vs. uniprot
Match: D7FMK4_ECTSI (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK4_ECTSI)

HSP 1 Score: 624 bits (1608), Expect = 1.700e-200
Identity = 469/1118 (41.95%), Postives = 601/1118 (53.76%), Query Frame = 1 
Query:    1 RYLYEVVQKAMDTRGGMDSCNHDHEIGSNPLLAAYQVCHDLCSSMVLEILHGQAQKLAARIGGLWATHLEIVFDKEAQVLDLCVWQREFNTGLAGTGREVGIGGVSGLDGDAWLPQYSSEMGLIVNLPPPPAGCRYVRVHRPPDRQRQIVASLGPALERQKSRDLESDMENGQGLDAVPDSLNRFLEDAEVERVGGGVVKGAVDVRADKLSCSRMLLAATRTFAAQKIEALASDVISLAYELGIVRCLIQVTLLGGFTLRISSANGNAAFCVWLEVSVDVKSGRYLVKDSGFVSRKVGTADLVSRLEDALNLLPRSDSQTLGEKITGALSAGR---REPSVRNASVRSGQQDLRQHQVRRCMAECFRVLRRGEVEHVMRRVFGLVPHQRWQALLGRVNAGG-RAGV--PAIVGS--AESSFRIATYSLIQQFREYERCRECKGFLMSDEWRRG-------RLGPGGSD-TGSKSALTTARLPGDV-IGPG--LSSKDP-----SLSTHPE----VLPT-VAASVVDNSNGGEVSASQPLR------VGPACS----SHTCQLRAEWSEVLSFFLEISIAENLELEVTLLVAGRPSNGPGRCSLRQTVGETYPLQVQVMPCSTRSSH---------LPTEVPTQNSQRFRMLGKRSASHMADGQGVGLMGTTDGASPTASPGKSSTLSIATPPQLARPDSRWQLDDVSKLSKVELLGHKGIEAELYTAVRMAKLFIPFARLQHALRTLTVGTSLSLDIQGLTNSLKHIVEPPSCAVDLFFGTEEGWSSPEVAAELAKVTFYDGHVESDCWEWDVTLGPNTMIMDYGDLDYGSGEAASLHRRRAALECVQDVLPLVQHIVVVALKAPKSKGANDCENVLGKHLKFRFPSLFSVRSMCRSFAMSGKGLASMQTLAAQASDLQRSEGFDSGMGYVVLSCSPIHVAMHDPCSHHVVVLTHTAFSAERFASQERPGLVLIPLRDHVPTCPAAMKELQAAVSKHRDLRSLLHGLSRTIPVLAAVSRVVPGIASVAAGAAAVSFGLSQNRSMTEEMFVLAPVSPACFVLSARPKTEKR----PPLTLIIEAGGHVRVAGLLDRKEDVVVNTAVLQDLLLEWIATGS 3198
            RYL+EV+QKAMD     D+         N LLAAYQVCHDLC SMVLEILH QAQKLA R+GGLWA  L ++F K++Q                                                                      IVA+LGP  E  + R L SD+ +           +    D E   V   ++  +V +  DKLSC+RMLLAA R FA+QK+  LA+DV S A +LG   C+ +VT +GG +  I    G       +EVSVDVKSGRYLVKD+     K   A  +SRL +ALNLLP +DSQ+LGE I   LSAGR   ++ S+     R+G+QDLRQ  VRRCM E F +LRRGE+EH  R  FG+VPH RWQALLGR +A    AG   P + GS    SS R+       QFRE        G L+S+ WR+        R G    + T ++ A T  ++P     G G  L+S  P     S S+  +     LP  +AAS+ + S+GG+  AS+  R      VG   +    S    +  E  EVLSFFLE+ I  NL++E T++ A  P+ G  R SLR  VGETY L     PC   S           LP++ P        +  KRSAS +  G   G +G T G      P   +TL  A             +  V + S+ +L           TAV+M   F+PFARLQHAL  L VGT LSLD + LT+      + P CAV  F   E GWSSPEVAA  A+V+F+ GH ++D WEWDVTLGP T +MD+        E   L   R     V + LPL QHI ++ ++    + ++      GKH++FRFP  FSV +MCRSFA++G+GL  MQTLAAQAS L R  G ++  GY V+SCSPIHVAM D    HVV+LTH+AFS+   +S +RPGLVLIP   H PTCPAAM+EL+A+V KHRDL +LLHGLSRT+PVLA VSRV+PG+ S A        G++ +RS +   FVL  V+PA FVLS  P  E+R    P LTL +EAGG VRV+     ++DVV +T  L+ LLLEWIA+ S
Sbjct:  251 RYLHEVIQKAMDVHADGDANPRP-----NALLAAYQVCHDLCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQ----------------------------------------------------------------------IVAALGPPGEFLEGRGLGSDVGD-----------HSVTTDEETSAVDS-LLTSSVQIYPDKLSCARMLLAAARIFASQKVNTLAADVESYAAQLG--ACVPRVTTVGGLSAYICPWGGGG-----VEVSVDVKSGRYLVKDTLPGGGKA-MASCISRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSIPTQRARNGEQDLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTDANAIDAGTEFPRLDGSDTLRSSVRLG------QFRE-------NGVLLSEAWRKRTRNFRILRRGTSAIELTRAERAATIGQVPTAASAGAGFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMASRSTRWRTDRGVGSGANGVKASSEGNVLEETGEVLSFFLEVDITGNLDVEHTVVSATLPTAGRARKSLRPVVGETYKL----FPCQPLSGSRCGSLDADLLPSKPPP------AVGTKRSASCLDAGYSQGAIGITTGVHDGLCP---TTLHAA-------------VGTVGEASQTQLC----------TAVQMCNRFVPFARLQHAL--LRVGTGLSLDFRELTHFSGATQQVPHCAV--FLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWAVPAKDEDKGLAVTRGI---VHEQLPLAQHIEILGVRQEGIESSSTTRMAQGKHVRFRFPPPFSVHAMCRSFALAGEGLTVMQTLAAQASKL-RQTGCEAA-GYSVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPW-PHAPTCPAAMRELEASVRKHRDLNALLHGLSRTVPVLAEVSRVLPGVGSAA--------GMNGDRSPSRGEFVLTAVTPARFVLSKSPLGERRLQSKPALTLAVEAGGQVRVS--TPGRKDVVADTGALRRLLLEWIASTS 1204
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16678.4183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMK4_ECTSI1.700e-20041.95Mediator of RNA polymerase II transcription subuni... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16678contigH-elongata_contig16678:2576..7379 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score620.5
Seed ortholog evalue1.4e-174
Seed eggNOG ortholog2880.D7FMK4
Preferred nameMED14
KEGG koko:K15156
KEGG Pathwayko04919,map04919
GOsGO:0000122,GO:0000428,GO:0001085,GO:0001091,GO:0001093,GO:0001098,GO:0001099,GO:0001103,GO:0003674,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0014070,GO:0016070,GO:0016591,GO:0016592,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0023052,GO:0030374,GO:0030518,GO:0030521,GO:0030522,GO:0030880,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032870,GO:0032991,GO:0033993,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0038023,GO:0042221,GO:0042809,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051427,GO:0051716,GO:0055029,GO:0060089,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070491,GO:0070847,GO:0070887,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0080090,GO:0090304,GO:0090575,GO:0097659,GO:0098727,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.regulation of transcription by RNA polymerase II
EggNOG OGsKOG1875@1,KOG1875@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMediator complex, subunit Med14
Ec32 orthologEc-23_000640.1
Exons6
Model size3484
Cds size3174
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16678.4183.1prot_H-elongata_contig16678.4183.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16678 2856..7349 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929974.9813879-UTR-H-elongata_contig16678:2575..28551622929974.9813879-UTR-H-elongata_contig16678:2575..2855Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16678 2576..2855 -
1691679230.9317794-UTR-H-elongata_contig16678:2575..28551691679230.9317794-UTR-H-elongata_contig16678:2575..2855Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16678 2576..2855 -
1622929975.1070015-UTR-H-elongata_contig16678:7349..73791622929975.1070015-UTR-H-elongata_contig16678:7349..7379Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16678 7350..7379 -
1691679231.0172327-UTR-H-elongata_contig16678:7349..73791691679231.0172327-UTR-H-elongata_contig16678:7349..7379Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16678 7350..7379 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929975.000881-CDS-H-elongata_contig16678:2855..49971622929975.000881-CDS-H-elongata_contig16678:2855..4997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 2856..4997 -
1691679230.947628-CDS-H-elongata_contig16678:2855..49971691679230.947628-CDS-H-elongata_contig16678:2855..4997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 2856..4997 -
1622929975.016421-CDS-H-elongata_contig16678:5332..55431622929975.016421-CDS-H-elongata_contig16678:5332..5543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 5333..5543 -
1691679230.9573174-CDS-H-elongata_contig16678:5332..55431691679230.9573174-CDS-H-elongata_contig16678:5332..5543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 5333..5543 -
1622929975.0338354-CDS-H-elongata_contig16678:5755..58781622929975.0338354-CDS-H-elongata_contig16678:5755..5878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 5756..5878 -
1691679230.9670727-CDS-H-elongata_contig16678:5755..58781691679230.9670727-CDS-H-elongata_contig16678:5755..5878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 5756..5878 -
1622929975.0530488-CDS-H-elongata_contig16678:6142..64261622929975.0530488-CDS-H-elongata_contig16678:6142..6426Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 6143..6426 -
1691679230.9764578-CDS-H-elongata_contig16678:6142..64261691679230.9764578-CDS-H-elongata_contig16678:6142..6426Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 6143..6426 -
1622929975.0702598-CDS-H-elongata_contig16678:6635..68451622929975.0702598-CDS-H-elongata_contig16678:6635..6845Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 6636..6845 -
1691679230.9963589-CDS-H-elongata_contig16678:6635..68451691679230.9963589-CDS-H-elongata_contig16678:6635..6845Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 6636..6845 -
1622929975.086593-CDS-H-elongata_contig16678:7145..73491622929975.086593-CDS-H-elongata_contig16678:7145..7349Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 7146..7349 -
1691679231.0079145-CDS-H-elongata_contig16678:7145..73491691679231.0079145-CDS-H-elongata_contig16678:7145..7349Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16678 7146..7349 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16678.4183.1

>prot_H-elongata_contig16678.4183.1 ID=prot_H-elongata_contig16678.4183.1|Name=mRNA_H-elongata_contig16678.4183.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1058bp
MDTRGGMDSCNHDHEIGSNPLLAAYQVCHDLCSSMVLEILHGQAQKLAAR
IGGLWATHLEIVFDKEAQVLDLCVWQREFNTGLAGTGREVGIGGVSGLDG
DAWLPQYSSEMGLIVNLPPPPAGCRYVRVHRPPDRQRQIVASLGPALERQ
KSRDLESDMENGQGLDAVPDSLNRFLEDAEVERVGGGVVKGAVDVRADKL
SCSRMLLAATRTFAAQKIEALASDVISLAYELGIVRCLIQVTLLGGFTLR
ISSANGNAAFCVWLEVSVDVKSGRYLVKDSGFVSRKVGTADLVSRLEDAL
NLLPRSDSQTLGEKITGALSAGRREPSVRNASVRSGQQDLRQHQVRRCMA
ECFRVLRRGEVEHVMRRVFGLVPHQRWQALLGRVNAGGRAGVPAIVGSAE
SSFRIATYSLIQQFREYERCRECKGFLMSDEWRRGRLGPGGSDTGSKSAL
TTARLPGDVIGPGLSSKDPSLSTHPEVLPTVAASVVDNSNGGEVSASQPL
RVGPACSSHTCQLRAEWSEVLSFFLEISIAENLELEVTLLVAGRPSNGPG
RCSLRQTVGETYPLQVQVMPCSTRSSHLPTEVPTQNSQRFRMLGKRSASH
MADGQGVGLMGTTDGASPTASPGKSSTLSIATPPQLARPDSRWQLDDVSK
LSKVELLGHKGIEAELYTAVRMAKLFIPFARLQHALRTLTVGTSLSLDIQ
GLTNSLKHIVEPPSCAVDLFFGTEEGWSSPEVAAELAKVTFYDGHVESDC
WEWDVTLGPNTMIMDYGDLDYGSGEAASLHRRRAALECVQDVLPLVQHIV
VVALKAPKSKGANDCENVLGKHLKFRFPSLFSVRSMCRSFAMSGKGLASM
QTLAAQASDLQRSEGFDSGMGYVVLSCSPIHVAMHDPCSHHVVVLTHTAF
SAERFASQERPGLVLIPLRDHVPTCPAAMKELQAAVSKHRDLRSLLHGLS
RTIPVLAAVSRVVPGIASVAAGAAAVSFGLSQNRSMTEEMFVLAPVSPAC
FVLSARPKTEKRPPLTLIIEAGGHVRVAGLLDRKEDVVVNTAVLQDLLLE
WIATGST*
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mRNA from alignment at H-elongata_contig16678:2576..7379-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16678.4183.1 ID=mRNA_H-elongata_contig16678.4183.1|Name=mRNA_H-elongata_contig16678.4183.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4804bp|location=Sequence derived from alignment at H-elongata_contig16678:2576..7379- (Himanthalia elongata Himel1 dioecious)
AGATACCTCTACGAGGTGGTGCAAAAGGCCATGGATACCAGGGGTGGCAT
GGATAGCTGCAATCATGATCACGAGATCGGGTCAAATCCTCTTTTGGCAG
CGTATCAAGTATGTCACGACCTTTGTAGCAGCATGGTGCTCGAGATCCTT
CACGGTCAGGCACAGAAGCTCGCCGCGAGGATAGGAGGATTGTGGGCCAC
CCACCTGGAGATTGTTTTCGACAAGGAGGCCCAGGTAAGCTTTCAAATCT
GCTTCGGTACTGGTACTGTATTGATAGAGTTTGTAGTTGTTTTAAAAACA
TCCGAAGCAAGTTCAAATTTCCACCCAGTGGAAGACCGTTGTTATTATGA
TCAAAAGCATGAGCCATTTCGGCACTGTCGAGCAAGCTGTAGAAATAAAA
AATGTTGAACGCTGGTGAGTAGCATTCCCGTTGCCAAGCTTGCTGATGCG
TTCCATCATGCTCAGGCGGAATTATTTCTGTCACCCTCTGTTTTAATTTT
GCATTGTAAATAATAACTTTGTGGATTGCAACAGGTTCTCGATTTGTGTG
TCTGGCAGCGAGAATTCAACACAGGACTTGCGGGTACTGGACGAGAAGTC
GGCATCGGGGGCGTCAGTGGTCTCGACGGCGATGCTTGGCTTCCCCAGTA
TTCGTCCGAAATGGGACTGATCGTTAATCTACCCCCACCTCCAGCTGGAT
GTCGCTATGTTCGAGTACATAGACCGCCGGACAGACAACGACAGGTTGTT
AGCTTTACACGCTGTGCTTTTGTGCGCAGATCGGGCTGGGGAGGGCTTTA
CTTACGTTGCACGGCTGGTCTCCGTCAGAGCGACAACCAAATCTGCATAA
TCTGATGCTGGATCTCATCAGAGCTACAGCAGTGATCTCAGGGTATTCCT
TGCGACACTCACGACAGCGCCCTTGTTTATGTTATCTATGTACCCTGTTC
CAGATAGTGGCATCACTCGGACCTGCACTGGAACGGCAGAAATCCCGAGA
CTTGGAGAGTGATATGGAAAATGGCCAAGGGCTTGACGCTGTCCCTGACT
CCCTCAATAGGTTTTTGGAGGATGCTGAGGTTGAAAGGGTGGGTGGTGGT
GTGGTGAAAGGCGCCGTGGATGTCCGCGCTGACAAGCTGAGCTGCTCACG
GATGTTGTTAGCAGCCACCCGAACTTTCGCAGCACAGAAGATCGAGGCAT
TGGCAAGTGATGTAATATCATTGGCGTACGAACTCGGGTGAGATAATTAC
TACCACTGTGCTTTCGCGCCCTCGTGAAGATAGCGGTGACAACGGTGATC
ACAACGATAATATTACTTAGCTCTGAAGAAATAATTAGTGGAAGAGGCAG
ACTAGCACTTGTCAGCTTTACAGGAAATCAAAGGTCAAACTCTTGAACGT
ACACCATGGAAAGCGGTTGTTGGATACCATGAGAAGTACCCTATGATCGC
TATCGTTTCGCTGTTTAGTTAATCGTTCACCATTTATCGTTGATCGCGCA
GAATTGTAAGGTGCTTGATTCAAGTGACGCTTTTAGGCGGCTTTACTCTC
CGAATTTCGTCTGCTAATGGAAATGCGGCTTTCTGTGTATGGCTGGAGGT
GTCAGTGGACGTTAAGAGCGGCAGGTGAGCTATGTCTAGGACTATGAATA
TGATGCTAGATGCTGTGGTGCTTTTCAAGAGTCGATGTAGCTCCTTCAAT
TTAGAGCTAGCTTTAGTAGTAGCCACGTGTGCATACATACAATACAGTCG
GAGTGTCGATTTCAAGAGCAGCGCGTTCAATCGCATTGCACATTGCATCG
GTTCCCTATGCATTCTCCCTTGCAAAAACACGACAGGTACCTCGTCAAGG
ACTCGGGTTTCGTTTCCCGCAAGGTGGGCACTGCAGATTTGGTTTCTCGT
CTCGAGGATGCCTTGAACCTTTTGCCTCGCTCCGACTCTCAAACACTGGG
AGAAAAGATCACCGGGGCGCTGTCGGCTGGCAGGAGAGAGCCCAGCGTCA
GGAACGCAAGTGTGCGGAGCGGGCAGCAAGATTTACGGCAACATCAGGTG
CAGGCTTTCAAAGACAAACTACATAACTAAATAGTTCTCTCGTGGACCGG
TCCAAATACTTGAATTTGCTAGATAGGTGTGTATATGTATTTTGTGTATG
TCACAGATGCGATGCGACTTTGCTTCGGCAGCAATGATCGACGCGAACGA
CAGTAACGATAAAGAAAAATTATAAGAACAGCAACGCAACGATCGAGTCG
CAAACAGTTGTGGTAGTAAAGGACCATATATTATCGTGTCACGGCAGCTG
TAGCTGTAGAGCTTACATGTGTCGTTTATATAGCATGTCATTCCCGTTTA
GCCCGTACAAACCCTTGTTTTGCTCGTGGCAGGTACGTCGCTGTATGGCA
GAGTGTTTCAGAGTGCTCCGCAGAGGGGAGGTAGAGCACGTTATGCGTCG
TGTGTTCGGACTGGTTCCTCACCAACGGTGGCAAGCTCTCTTGGGTCGTG
TAAATGCTGGGGGGAGAGCCGGTGTACCGGCCATTGTTGGGAGCGCGGAA
AGTAGCTTCCGAATCGCAACTTACTCCCTTATCCAGCAGTTCCGCGAGTA
CGAAAGATGTAGAGAATGTAAGGGGTTCCTGATGTCAGACGAATGGAGAA
GAGGTCGACTTGGTCCAGGGGGCAGCGATACGGGTTCAAAGTCGGCGTTA
ACCACTGCTAGGCTGCCTGGAGACGTCATCGGACCGGGCCTAAGCTCGAA
AGATCCCTCGTTATCAACTCATCCAGAAGTATTGCCGACTGTCGCAGCAT
CGGTGGTAGATAATTCTAATGGAGGTGAGGTTTCCGCCAGCCAGCCACTA
CGTGTGGGTCCAGCATGTTCGTCACATACTTGCCAACTTCGTGCAGAGTG
GAGCGAGGTACTCTCGTTCTTCCTGGAGATTAGCATCGCAGAAAACTTGG
AGCTGGAGGTCACGCTTCTTGTGGCGGGGCGGCCTTCGAATGGGCCAGGT
CGCTGTTCACTTCGACAAACAGTGGGGGAAACGTATCCGCTGCAGGTGCA
GGTGATGCCCTGCAGCACGAGAAGTTCGCATTTACCAACCGAAGTACCCA
CACAAAATTCGCAACGATTCCGTATGCTGGGCAAACGATCAGCCTCACAC
ATGGCAGACGGACAGGGCGTTGGGTTGATGGGAACGACAGATGGCGCAAG
TCCAACTGCCAGTCCAGGAAAAAGCTCGACACTGTCTATTGCTACTCCTC
CCCAATTGGCGAGACCCGATTCGCGGTGGCAACTAGATGACGTATCAAAA
TTGTCAAAAGTTGAGCTTCTAGGCCACAAAGGAATCGAGGCTGAGCTGTA
CACGGCTGTGCGCATGGCGAAGCTCTTCATCCCCTTTGCGCGACTGCAGC
ATGCCCTCCGCACGCTCACAGTTGGCACATCTTTGTCGCTGGATATCCAG
GGCCTGACTAACTCTTTGAAACATATAGTTGAGCCCCCTTCCTGTGCAGT
AGATCTTTTCTTCGGGACTGAAGAAGGCTGGTCGAGCCCAGAGGTGGCTG
CAGAGTTGGCGAAGGTGACATTCTACGATGGGCATGTTGAGTCCGATTGC
TGGGAGTGGGATGTTACCCTGGGACCAAATACGATGATCATGGACTACGG
CGACCTTGATTATGGCAGTGGGGAGGCGGCAAGTTTGCATAGACGCAGGG
CCGCGTTGGAATGCGTGCAGGACGTGTTACCCTTGGTCCAGCACATTGTA
GTAGTCGCTTTGAAAGCGCCGAAGTCTAAGGGAGCAAATGACTGCGAAAA
TGTTTTGGGAAAACACCTGAAGTTTCGTTTTCCCTCTCTGTTTTCAGTAC
GTTCCATGTGTCGCTCGTTTGCTATGTCAGGAAAGGGTTTGGCATCTATG
CAGACGTTGGCTGCTCAGGCCTCCGATTTGCAGCGAAGTGAAGGTTTTGA
TTCAGGAATGGGATATGTTGTCTTGTCGTGCAGCCCGATACACGTTGCGA
TGCATGATCCCTGCTCACACCACGTCGTGGTTCTCACGCACACCGCATTT
TCAGCTGAGCGCTTCGCGTCGCAAGAGCGCCCGGGATTGGTATTGATTCC
CTTGCGCGACCATGTACCCACTTGTCCAGCAGCAATGAAGGAGCTTCAGG
CGGCAGTATCGAAGCACCGCGATCTTCGTTCCTTGTTGCATGGACTCTCG
CGGACGATTCCGGTCCTGGCCGCGGTTTCCCGCGTTGTTCCAGGCATCGC
GAGTGTAGCAGCAGGAGCAGCAGCAGTTAGCTTCGGGTTAAGCCAAAACC
GTAGCATGACTGAAGAAATGTTTGTGTTGGCGCCTGTTAGCCCCGCGTGT
TTCGTTCTGTCTGCTCGCCCTAAGACAGAGAAGCGACCACCACTGACTTT
GATTATAGAGGCAGGCGGGCATGTTCGCGTTGCTGGATTGTTGGATCGGA
AAGAGGATGTCGTGGTCAACACTGCTGTTTTGCAAGATTTGTTACTTGAG
TGGATCGCAACAGGTTCTACGTAATCAGCTCGGCGGTATCCTAGCGTTAA
ATACGTCCTGGAAAACATCCATACTTTCTTGCCACATAAATAAATTGTTG
TAAGGTCACATGTACCAAGTGCTAAAAACAATTTCTAGATTTCAAGTGGC
TGATCGCGGTTAACAAAAATCCTGCATGAATTAAAGGCTTAACTTTTTGT
TTGTTTATAAATTAAAAAATCACGACTCGACCCGAAAGGATATTGGAGAA
AAACAAAGACAAAACTGAAAAGCGGGTCGTTTTTTTGCGCCGGCAATGTC
AGCA
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Coding sequence (CDS) from alignment at H-elongata_contig16678:2576..7379-

>mRNA_H-elongata_contig16678.4183.1 ID=mRNA_H-elongata_contig16678.4183.1|Name=mRNA_H-elongata_contig16678.4183.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=6348bp|location=Sequence derived from alignment at H-elongata_contig16678:2576..7379- (Himanthalia elongata Himel1 dioecious)
ATGGATACCAGGGGTGGCATGGATAGCTGCAATCATGATCACGAGATCGG
GTCAAATCCTCTTTTGGCAGCGTATCAAGTATGTCACGACCTTTGTAGCA
GCATGGTGCTCGAGATCCTTCACGGTCAGGCACAGAAGCTCGCCGCGAGG
ATAGGAGGATTGTGGGCCACCCACCTGGAGATTGTTTTCGACAAGGAGGC
CCAGATGGATACCAGGGGTGGCATGGATAGCTGCAATCATGATCACGAGA
TCGGGTCAAATCCTCTTTTGGCAGCGTATCAAGTATGTCACGACCTTTGT
AGCAGCATGGTGCTCGAGATCCTTCACGGTCAGGCACAGAAGCTCGCCGC
GAGGATAGGAGGATTGTGGGCCACCCACCTGGAGATTGTTTTCGACAAGG
AGGCCCAGGTTCTCGATTTGTGTGTCTGGCAGCGAGAATTCAACACAGGA
CTTGCGGGTACTGGACGAGAAGTCGGCATCGGGGGCGTCAGTGGTCTCGA
CGGCGATGCTTGGCTTCCCCAGTATTCGTCCGAAATGGGACTGATCGTTA
ATCTACCCCCACCTCCAGCTGGATGTCGCTATGTTCGAGTACATAGACCG
CCGGACAGACAACGACAGGTTCTCGATTTGTGTGTCTGGCAGCGAGAATT
CAACACAGGACTTGCGGGTACTGGACGAGAAGTCGGCATCGGGGGCGTCA
GTGGTCTCGACGGCGATGCTTGGCTTCCCCAGTATTCGTCCGAAATGGGA
CTGATCGTTAATCTACCCCCACCTCCAGCTGGATGTCGCTATGTTCGAGT
ACATAGACCGCCGGACAGACAACGACAGATAGTGGCATCACTCGGACCTG
CACTGGAACGGCAGAAATCCCGAGACTTGGAGAGTGATATGGAAAATGGC
CAAGGGCTTGACGCTGTCCCTGACTCCCTCAATAGGTTTTTGGAGGATGC
TGAGGTTGAAAGGGTGGGTGGTGGTGTGGTGAAAGGCGCCGTGGATGTCC
GCGCTGACAAGCTGAGCTGCTCACGGATGTTGTTAGCAGCCACCCGAACT
TTCGCAGCACAGAAGATCGAGGCATTGGCAAGTGATGTAATATCATTGGC
GTACGAACTCGGATAGTGGCATCACTCGGACCTGCACTGGAACGGCAGAA
ATCCCGAGACTTGGAGAGTGATATGGAAAATGGCCAAGGGCTTGACGCTG
TCCCTGACTCCCTCAATAGGTTTTTGGAGGATGCTGAGGTTGAAAGGGTG
GGTGGTGGTGTGGTGAAAGGCGCCGTGGATGTCCGCGCTGACAAGCTGAG
CTGCTCACGGATGTTGTTAGCAGCCACCCGAACTTTCGCAGCACAGAAGA
TCGAGGCATTGGCAAGTGATGTAATATCATTGGCGTACGAACTCGGAATT
GTAAGGTGCTTGATTCAAGTGACGCTTTTAGGCGGCTTTACTCTCCGAAT
TTCGTCTGCTAATGGAAATGCGGCTTTCTGTGTATGGCTGGAGGTGTCAG
TGGACGTTAAGAGCGGCAGAATTGTAAGGTGCTTGATTCAAGTGACGCTT
TTAGGCGGCTTTACTCTCCGAATTTCGTCTGCTAATGGAAATGCGGCTTT
CTGTGTATGGCTGGAGGTGTCAGTGGACGTTAAGAGCGGCAGGTACCTCG
TCAAGGACTCGGGTTTCGTTTCCCGCAAGGTGGGCACTGCAGATTTGGTT
TCTCGTCTCGAGGATGCCTTGAACCTTTTGCCTCGCTCCGACTCTCAAAC
ACTGGGAGAAAAGATCACCGGGGCGCTGTCGGCTGGCAGGAGAGAGCCCA
GCGTCAGGAACGCAAGTGTGCGGAGCGGGCAGCAAGATTTACGGCAACAT
CAGGTACCTCGTCAAGGACTCGGGTTTCGTTTCCCGCAAGGTGGGCACTG
CAGATTTGGTTTCTCGTCTCGAGGATGCCTTGAACCTTTTGCCTCGCTCC
GACTCTCAAACACTGGGAGAAAAGATCACCGGGGCGCTGTCGGCTGGCAG
GAGAGAGCCCAGCGTCAGGAACGCAAGTGTGCGGAGCGGGCAGCAAGATT
TACGGCAACATCAGGTACGTCGCTGTATGGCAGAGTGTTTCAGAGTGCTC
CGCAGAGGGGAGGTAGAGCACGTTATGCGTCGTGTGTTCGGACTGGTTCC
TCACCAACGGTGGCAAGCTCTCTTGGGTCGTGTAAATGCTGGGGGGAGAG
CCGGTGTACCGGCCATTGTTGGGAGCGCGGAAAGTAGCTTCCGAATCGCA
ACTTACTCCCTTATCCAGCAGTTCCGCGAGTACGAAAGATGTAGAGAATG
TAAGGGGTTCCTGATGTCAGACGAATGGAGAAGAGGTCGACTTGGTCCAG
GGGGCAGCGATACGGGTTCAAAGTCGGCGTTAACCACTGCTAGGCTGCCT
GGAGACGTCATCGGACCGGGCCTAAGCTCGAAAGATCCCTCGTTATCAAC
TCATCCAGAAGTATTGCCGACTGTCGCAGCATCGGTGGTAGATAATTCTA
ATGGAGGTGAGGTTTCCGCCAGCCAGCCACTACGTGTGGGTCCAGCATGT
TCGTCACATACTTGCCAACTTCGTGCAGAGTGGAGCGAGGTACTCTCGTT
CTTCCTGGAGATTAGCATCGCAGAAAACTTGGAGCTGGAGGTCACGCTTC
TTGTGGCGGGGCGGCCTTCGAATGGGCCAGGTCGCTGTTCACTTCGACAA
ACAGTGGGGGAAACGTATCCGCTGCAGGTGCAGGTGATGCCCTGCAGCAC
GAGAAGTTCGCATTTACCAACCGAAGTACCCACACAAAATTCGCAACGAT
TCCGTATGCTGGGCAAACGATCAGCCTCACACATGGCAGACGGACAGGGC
GTTGGGTTGATGGGAACGACAGATGGCGCAAGTCCAACTGCCAGTCCAGG
AAAAAGCTCGACACTGTCTATTGCTACTCCTCCCCAATTGGCGAGACCCG
ATTCGCGGTGGCAACTAGATGACGTATCAAAATTGTCAAAAGTTGAGCTT
CTAGGCCACAAAGGAATCGAGGCTGAGCTGTACACGGCTGTGCGCATGGC
GAAGCTCTTCATCCCCTTTGCGCGACTGCAGCATGCCCTCCGCACGCTCA
CAGTTGGCACATCTTTGTCGCTGGATATCCAGGGCCTGACTAACTCTTTG
AAACATATAGTTGAGCCCCCTTCCTGTGCAGTAGATCTTTTCTTCGGGAC
TGAAGAAGGCTGGTCGAGCCCAGAGGTGGCTGCAGAGTTGGCGAAGGTGA
CATTCTACGATGGGCATGTTGAGTCCGATTGCTGGGAGTGGGATGTTACC
CTGGGACCAAATACGATGATCATGGACTACGGCGACCTTGATTATGGCAG
TGGGGAGGCGGCAAGTTTGCATAGACGCAGGGCCGCGTTGGAATGCGTGC
AGGACGTGTTACCCTTGGTCCAGCACATTGTAGTAGTCGCTTTGAAAGCG
CCGAAGTCTAAGGGAGCAAATGACTGCGAAAATGTTTTGGGAAAACACCT
GAAGTTTCGTTTTCCCTCTCTGTTTTCAGTACGTTCCATGTGTCGCTCGT
TTGCTATGTCAGGAAAGGGTTTGGCATCTATGCAGACGTTGGCTGCTCAG
GCCTCCGATTTGCAGCGAAGTGAAGGTTTTGATTCAGGAATGGGATATGT
TGTCTTGTCGTGCAGCCCGATACACGTTGCGATGCATGATCCCTGCTCAC
ACCACGTCGTGGTTCTCACGCACACCGCATTTTCAGCTGAGCGCTTCGCG
TCGCAAGAGCGCCCGGGATTGGTATTGATTCCCTTGCGCGACCATGTACC
CACTTGTCCAGCAGCAATGAAGGAGCTTCAGGCGGCAGTATCGAAGCACC
GCGATCTTCGTTCCTTGTTGCATGGACTCTCGCGGACGATTCCGGTCCTG
GCCGCGGTTTCCCGCGTTGTTCCAGGCATCGCGAGTGTAGCAGCAGGAGC
AGCAGCAGTTAGCTTCGGGTTAAGCCAAAACCGTAGCATGACTGAAGAAA
TGTTTGTGTTGGCGCCTGTTAGCCCCGCGTGTTTCGTTCTGTCTGCTCGC
CCTAAGACAGAGAAGCGACCACCACTGACTTTGATTATAGAGGCAGGCGG
GCATGTTCGCGTTGCTGGATTGTTGGATCGGAAAGAGGATGTCGTGGTCA
ACACTGCTGTTTTGCAAGATTTGTTACTTGAGTGGATCGCAACAGGTTCT
ACGTAAGTACGTCGCTGTATGGCAGAGTGTTTCAGAGTGCTCCGCAGAGG
GGAGGTAGAGCACGTTATGCGTCGTGTGTTCGGACTGGTTCCTCACCAAC
GGTGGCAAGCTCTCTTGGGTCGTGTAAATGCTGGGGGGAGAGCCGGTGTA
CCGGCCATTGTTGGGAGCGCGGAAAGTAGCTTCCGAATCGCAACTTACTC
CCTTATCCAGCAGTTCCGCGAGTACGAAAGATGTAGAGAATGTAAGGGGT
TCCTGATGTCAGACGAATGGAGAAGAGGTCGACTTGGTCCAGGGGGCAGC
GATACGGGTTCAAAGTCGGCGTTAACCACTGCTAGGCTGCCTGGAGACGT
CATCGGACCGGGCCTAAGCTCGAAAGATCCCTCGTTATCAACTCATCCAG
AAGTATTGCCGACTGTCGCAGCATCGGTGGTAGATAATTCTAATGGAGGT
GAGGTTTCCGCCAGCCAGCCACTACGTGTGGGTCCAGCATGTTCGTCACA
TACTTGCCAACTTCGTGCAGAGTGGAGCGAGGTACTCTCGTTCTTCCTGG
AGATTAGCATCGCAGAAAACTTGGAGCTGGAGGTCACGCTTCTTGTGGCG
GGGCGGCCTTCGAATGGGCCAGGTCGCTGTTCACTTCGACAAACAGTGGG
GGAAACGTATCCGCTGCAGGTGCAGGTGATGCCCTGCAGCACGAGAAGTT
CGCATTTACCAACCGAAGTACCCACACAAAATTCGCAACGATTCCGTATG
CTGGGCAAACGATCAGCCTCACACATGGCAGACGGACAGGGCGTTGGGTT
GATGGGAACGACAGATGGCGCAAGTCCAACTGCCAGTCCAGGAAAAAGCT
CGACACTGTCTATTGCTACTCCTCCCCAATTGGCGAGACCCGATTCGCGG
TGGCAACTAGATGACGTATCAAAATTGTCAAAAGTTGAGCTTCTAGGCCA
CAAAGGAATCGAGGCTGAGCTGTACACGGCTGTGCGCATGGCGAAGCTCT
TCATCCCCTTTGCGCGACTGCAGCATGCCCTCCGCACGCTCACAGTTGGC
ACATCTTTGTCGCTGGATATCCAGGGCCTGACTAACTCTTTGAAACATAT
AGTTGAGCCCCCTTCCTGTGCAGTAGATCTTTTCTTCGGGACTGAAGAAG
GCTGGTCGAGCCCAGAGGTGGCTGCAGAGTTGGCGAAGGTGACATTCTAC
GATGGGCATGTTGAGTCCGATTGCTGGGAGTGGGATGTTACCCTGGGACC
AAATACGATGATCATGGACTACGGCGACCTTGATTATGGCAGTGGGGAGG
CGGCAAGTTTGCATAGACGCAGGGCCGCGTTGGAATGCGTGCAGGACGTG
TTACCCTTGGTCCAGCACATTGTAGTAGTCGCTTTGAAAGCGCCGAAGTC
TAAGGGAGCAAATGACTGCGAAAATGTTTTGGGAAAACACCTGAAGTTTC
GTTTTCCCTCTCTGTTTTCAGTACGTTCCATGTGTCGCTCGTTTGCTATG
TCAGGAAAGGGTTTGGCATCTATGCAGACGTTGGCTGCTCAGGCCTCCGA
TTTGCAGCGAAGTGAAGGTTTTGATTCAGGAATGGGATATGTTGTCTTGT
CGTGCAGCCCGATACACGTTGCGATGCATGATCCCTGCTCACACCACGTC
GTGGTTCTCACGCACACCGCATTTTCAGCTGAGCGCTTCGCGTCGCAAGA
GCGCCCGGGATTGGTATTGATTCCCTTGCGCGACCATGTACCCACTTGTC
CAGCAGCAATGAAGGAGCTTCAGGCGGCAGTATCGAAGCACCGCGATCTT
CGTTCCTTGTTGCATGGACTCTCGCGGACGATTCCGGTCCTGGCCGCGGT
TTCCCGCGTTGTTCCAGGCATCGCGAGTGTAGCAGCAGGAGCAGCAGCAG
TTAGCTTCGGGTTAAGCCAAAACCGTAGCATGACTGAAGAAATGTTTGTG
TTGGCGCCTGTTAGCCCCGCGTGTTTCGTTCTGTCTGCTCGCCCTAAGAC
AGAGAAGCGACCACCACTGACTTTGATTATAGAGGCAGGCGGGCATGTTC
GCGTTGCTGGATTGTTGGATCGGAAAGAGGATGTCGTGGTCAACACTGCT
GTTTTGCAAGATTTGTTACTTGAGTGGATCGCAACAGGTTCTACGTAA
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