mRNA_H-elongata_contig16657.4177.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: D7FHI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHI5_ECTSI) HSP 1 Score: 388 bits (997), Expect = 1.750e-132 Identity = 210/302 (69.54%), Postives = 235/302 (77.81%), Query Frame = 1
Query: 1 YSVAATAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVDV------ENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDT----GSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASH--ASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
YSVAATAQWFLEGSR YGA+GF N+ ASF+P DL+V+MR +VACVTGANSGIGY AKSLAE CTVHMLCRN+ARGE AR+R++ ETGNEDV+LHVVDV E FA SFL+ N L+VL+NNAGGMPAERT+S QGHE IMATMLGGTYLLTKLLLPALE AA A GS G+ + G GARVINVSSGGMYTV G GI+ D++S+ V+P+D TVVYA AKRAQVTLTERWAA H V FNSMHPGW DTPGLA GMP F+ Q GSLRSSEEG+DTIVWL
Sbjct: 3 YSVAATAQWFLEGSRKYGAKGFANACASFSPGDLDVNMRSKVACVTGANSGIGYCAAKSLAERNCTVHMLCRNKARGEEARARLSAETGNEDVYLHVVDVSDFQQVETFAGSFLESNTRLDVLINNAGGMPAERTESAQGHEAIMATMLGGTYLLTKLLLPALEKAAM-TAEGSAXXXXXXXXXXXGGADSRPGGGKTGARVINVSSGGMYTVSGAGIAADVDSKGVDPYDGTVVYALAKRAQVTLTERWAAMHKDGGVSFNSMHPGWCDTPGLASGMPDFRERQQGSLRSSEEGSDTIVWL 303
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A8B7ZE70_ACAPL (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZE70_ACAPL) HSP 1 Score: 219 bits (557), Expect = 2.610e-66 Identity = 127/289 (43.94%), Postives = 167/289 (57.79%), Query Frame = 1
Query: 25 WFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGIS-EDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
+ ++G R + G+ ++A +F P+DL++D+ + +TGANSGIG A LA+ TVHM+CR+EARG+ A+ + E +GNE VHLH+VD V FAT F + +LNVLVNNAG M R + G E AT GTY+LT LLP L + G+RV+ VSSGGMYT +S D++ RV +D T+VYA KR QV +TE WA SH +V F+ MHPGWADTP + MPGF R LRS E+GADT+VWL
Sbjct: 9 FIIKGLREFCRSGYESAAKNFKPEDLSIDLSSQSFMITGANSGIGKCTAYELAKRGGTVHMVCRSEARGQEAQKEIKESSGNEKVHLHIVDMSQPKRVYEFATQFRESGNTLNVLVNNAGCMVNTREVTEDGLEKNFATNTLGTYILTMSLLPLLRDTP---------------------------GSRVVTVSSGGMYTQK---LSLSDMQCERVSNFDGTMVYAQNKRQQVVMTEMWAKSHPAVHFSVMHPGWADTPAVRTSMPGFHRQFKNRLRSPEQGADTLVWL 267
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A7S2UXC8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXC8_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.600e-65 Identity = 126/287 (43.90%), Postives = 166/287 (57.84%), Query Frame = 1
Query: 34 EGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVDVEN------FATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHA--SVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
EG+ YG++GF+N F + VD+ G V+C+TGANSGIG+ AK LA+ + VH++CR+ +G+ A ++ T N+ + LH+VDV + FA +F N L+VLVNNA MPAER ++ +G+EM + T TYLLT L+P L+ ++ RVINVSS GMYTV +DL S + P+D ++YA AKR QV LTE A + SV NSMHPGW DTPGLA MP F S G+LRS E GADTIVWL
Sbjct: 4 EGNNLYGSKGFQNMVEKFG-EIPKVDLNGTVSCITGANSGIGFETAKKLAQFQSEVHLVCRDPVKGQEAVEKIKACTENDKIFLHIVDVSSMRQVSAFAETFAQENSKLDVLVNNAMSMPAERLETEEGNEMCIGTTAAQTYLLTTKLMPLLQKSSP---------------------------GRVINVSSAGMYTVKAR--IDDLNSENI-PYDGVLMYALAKRVQVILTEMMAEDYKGKSVTINSMHPGWVDTPGLATQMPSFYSSHKGTLRSMEAGADTIVWL 259
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A2T7DX14_9POAL (Uncharacterized protein n=3 Tax=Panicum TaxID=4539 RepID=A0A2T7DX14_9POAL) HSP 1 Score: 213 bits (543), Expect = 3.130e-64 Identity = 124/291 (42.61%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 16 TAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
TA + L G + GF A F +D+ + + G+ VTGANSGIG++ A+ LA H TV+MLCR++ RGE A +++ +TGNE+VHL + D V++FAT F + L+VLVNNAG + +R + +G E+ A + TY LT+L++P LE AA ARVI V+SGGMYT P +++DL+ +D T+ YA KR QV LTE WA + V F SMHPGWADTPG+A+ +PGF +G+LRS++EGADT+VWL
Sbjct: 9 TASFGLYGFTQFTKSGFLEHAKKFREEDMQIRLDGKNCLVTGANSGIGFATAEGLASHGATVYMLCRSKERGEAALNQIRSKTGNENVHLEICDLSSINEVKSFATKFTSMDKPLHVLVNNAGLLEHKRETTAEGLELNFAVNVAATYTLTELVMPLLEKAAPD--------------------------ARVITVASGGMYTEP---LNKDLQFSEGN-FDGTLQYARNKRIQVALTEWWAEKYKGVGFYSMHPGWADTPGVAKSLPGFSEKLSGNLRSNDEGADTVVWL 269
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A6J1F992_CUCMO (dehydrogenase/reductase SDR family member 12 n=7 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1F992_CUCMO) HSP 1 Score: 212 bits (539), Expect = 2.090e-63 Identity = 124/307 (40.39%), Postives = 182/307 (59.28%), Query Frame = 1
Query: 4 SVAATAQWFLEGSRF--YGARGFRNSAAS--------FAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
S+ A A + L+ R +GA G+ N S F P+D+ ++ G+ VTGANSGIGY+ A+ LA TV+M+CRN+ RGE A S + +TGN+++HL V D V++F+++F+ +N ++VLVNNAG + R + +G E+ A + GTY +T+L++P LE AA A+VI VSSGGMY+VP ++ DL+ V+ +D YA KR QV LTE+WA +++ + F SMHPGWA+TPG+A+ +P F +S +G LR+ EEGADTI+WL
Sbjct: 13 SIGALAMFLLKAWRVSVFGAYGYLNFTKSAFSEHSKMFKPEDMQANIEGKNCIVTGANSGIGYATAEGLASRGATVYMVCRNKERGEAALSEIKSKTGNQNIHLEVCDLSSIRDVKSFSSNFISKNVPVHVLVNNAGLLENNRVTTSEGFELNFAVNVLGTYAITELMMPLLEKAAPD--------------------------AKVITVSSGGMYSVP---LTNDLQFSEVK-FDGAKQYALNKRVQVALTEKWAEKYSNKGIGFYSMHPGWAETPGVAKSLPSFTKSLSGKLRTREEGADTIIWL 289
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A078IFY2_BRANA (BnaA09g22880D protein n=30 Tax=Brassicaceae TaxID=3700 RepID=A0A078IFY2_BRANA) HSP 1 Score: 211 bits (536), Expect = 3.520e-63 Identity = 118/278 (42.45%), Postives = 172/278 (61.87%), Query Frame = 1
Query: 61 GFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
GF + + F P+D+ + ++G+ VTGANSGIGY+ A+ LA TV+M+CRN+ RGE A S++ TGN++V+L V D +++FA+SF ++ ++VLVNNAG + +RT +P+G E+ A + GTY +T+L+LP LE A+ ++VI VSSGGMYT P ++ DL+ E +D + YA KR QV LTE+WA + + + F SMHPGWA+TPG+A +P F+ S +G LR+SEEGADT+VWL
Sbjct: 24 GFLDHSKKFKPEDMQIQIQGKNCVVTGANSGIGYAAAEGLASRGATVYMVCRNKERGEEALSKIQNSTGNQNVYLEVCDLSSVNDIKSFASSFASKDVPVHVLVNNAGLLENKRTTTPEGFELNFAVNVLGTYTMTELMLPLLEKASPD--------------------------SKVITVSSGGMYTSP---LTTDLQFSG-EKFDGVLQYARNKRIQVALTEKWAEKYKNKGIGFYSMHPGWAETPGVARSLPSFKESFSGKLRTSEEGADTVVWL 271
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A6I9QU12_ELAGV (dehydrogenase/reductase SDR family member 12 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QU12_ELAGV) HSP 1 Score: 211 bits (536), Expect = 3.520e-63 Identity = 124/293 (42.32%), Postives = 169/293 (57.68%), Query Frame = 1
Query: 16 TAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
T + L G + GF+ A F +D+ + M G+ VTGANSGIGY+ A+ LA TV+M+CR++ RGE A S++ TGN +VHL V D V++F + F +L+VLVNNAG + R + +G E+ A + TY LT+L++P+LE AA ARVI VSSGGMYT P ++EDL+ + +D + YA KR QV LTE+WA ++ S V F SMHPGWADTPG+A+ +PGF +G LR+SEEGADT +WL
Sbjct: 9 TTAFGLYGFTQFTKAGFQEHAKKFKEEDMQISMEGKNCMVTGANSGIGYATAEGLASRGATVYMVCRSKERGETALSKIQSTTGNPNVHLEVCDLSSISDVKSFVSRFSSEEKALHVLVNNAGLLEPNRVTTEEGLELNFAVNVAATYTLTELMMPSLEKAAPD--------------------------ARVITVSSGGMYTTP---LTEDLQFSESK-FDGVLQYARNKRVQVALTEKWAETYKSKGVSFYSMHPGWADTPGVAKSLPGFSEKLSGKLRTSEEGADTAIWL 271
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: UPI001863AEE1 (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863AEE1) HSP 1 Score: 211 bits (537), Expect = 4.530e-63 Identity = 122/288 (42.36%), Postives = 166/288 (57.64%), Query Frame = 1
Query: 25 WFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHASVRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
WFL+G Y GF ++ F DL+V + G+ +TGANSGIG + A ++A+ T+HM+CRN+ R E AR + ETGN+++H+H++D V FA SF R+ SLNVL+NNAG M R + +G E AT G Y+LTK L+P LE R + RV+ VSSGGM + DL+S +D T+VYA KR QV +TE+WA +H+S+ F+SMHPGWADTP +A MP F R+ LR++E+GADT VWL
Sbjct: 9 WFLKGIHEYTRSGFEAASTHFVEKDLDVSVAGKSFMITGANSGIGKATAIAIAKRGGTIHMVCRNKERAEEAREDIIRETGNKEIHVHLLDMAETQKVWEFAESFKKRHRSLNVLINNAGCMVHRREVNSEGLEKNFATNTLGVYILTKSLIPLLE---------------------------RSSNPRVVTVSSGGMLVQKLS--TSDLQSEEGY-FDGTMVYAQNKRQQVVMTEQWAKAHSSIHFSSMHPGWADTPAVATAMPQFHRTMQDKLRTAEQGADTAVWL 266
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: I1GXQ3_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GXQ3_BRADI) HSP 1 Score: 209 bits (533), Expect = 1.110e-62 Identity = 122/293 (41.64%), Postives = 171/293 (58.36%), Query Frame = 1
Query: 16 TAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
TA + L G + GF A F +D+ + + G+ VTGANSG+G++ A+ LA H TV+MLCRN+ RGE A ++ +TGN +VHL + D +++F T F N L+VLVNNAG + +R +P+G E+ A + TY LT+L++P LE AA ARVI VSSGGMYT P ++ +LE R + +D T YA KR QV LTE W+ +++ + F SMHPGWADTPG+++ +PG +G+LRS+EEGADT+VWL
Sbjct: 9 TAAFGLYGFTQFTKSGFAEHAKKFREEDMQIRLDGKNCLVTGANSGLGFATAEGLASHGATVYMLCRNKERGETALKQIRSKTGNMNVHLEICDLSSINEIKSFTTRFSSMNKPLHVLVNNAGFLEHKRVTTPEGLELNFAVNVAATYTLTELVMPLLEKAAPD--------------------------ARVITVSSGGMYTEP---LNNNLEYRESD-FDGTKQYARNKRVQVALTEWWSEKYSNKGIGFYSMHPGWADTPGVSKSLPGLSEKLSGNLRSNEEGADTVVWL 271
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Match: A0A1S4E3H2_CUCME (dehydrogenase/reductase SDR family member 12 isoform X1 n=4 Tax=Cucumis TaxID=3655 RepID=A0A1S4E3H2_CUCME) HSP 1 Score: 209 bits (533), Expect = 1.660e-62 Identity = 120/295 (40.68%), Postives = 173/295 (58.64%), Query Frame = 1
Query: 25 WFLEGSRFYGARGFRNSA-----ASFAPDDLNVDMRGRVACVTGANSGIGYSVAKSLAEHKCTVHMLCRNEARGERARSRVAEETGNEDVHLHVVD------VENFATSFLDRNPSLNVLVNNAGGMPAERTQSPQGHEMIMATMLGGTYLLTKLLLPALENAAAAVASGSGGAEVASDTGSKGKGGVRDAGARVINVSSGGMYTVPGGGISEDLESRRVEPWDATVVYAFAKRAQVTLTERWAASHAS--VRFNSMHPGWADTPGLAEGMPGFQRSQAGSLRSSEEGADTIVWL 870
W L YG F SA F P+D+ ++ G+ VTGANSGIGY+ A+ LA TV+M+CR++ RGE A S + +TGN++VHL V D +++F+++F+ +N ++VLVNNAG + R + +G E+ A + GTY +T+ LLP LE AA A+VI VSSGGMY+VP +++DL+ + +D + YA KR QV LTE+WA ++ + F SMHPGWA+TPG+ + +P F +S +G LR+SEEGADTI+WL
Sbjct: 25 WRLSAFGVYGYLNFTKSAFIEHSKMFKPEDMQTNIEGKNCIVTGANSGIGYATAEGLASRGATVYMICRSKERGEAALSEIKSKTGNQNVHLEVCDLSSIRDIKSFSSNFISKNVPVHVLVNNAGLLEKNRITTSEGFELNFAVNVLGTYAMTESLLPLLEKAAPD--------------------------AKVITVSSGGMYSVP---LTDDLQFSE-DQFDGAIQYALNKRVQVALTEKWAEMYSKKGIGFYSMHPGWAETPGVTKSLPSFSKSLSGKLRTSEEGADTIIWL 289 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16657.4177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16657.4177.1 >prot_H-elongata_contig16657.4177.1 ID=prot_H-elongata_contig16657.4177.1|Name=mRNA_H-elongata_contig16657.4177.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=290bp YSVAATAQWFLEGSRFYGARGFRNSAASFAPDDLNVDMRGRVACVTGANSback to top mRNA from alignment at H-elongata_contig16657:1656..7235+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16657.4177.1 ID=mRNA_H-elongata_contig16657.4177.1|Name=mRNA_H-elongata_contig16657.4177.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5580bp|location=Sequence derived from alignment at H-elongata_contig16657:1656..7235+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16657:1656..7235+ >mRNA_H-elongata_contig16657.4177.1 ID=mRNA_H-elongata_contig16657.4177.1|Name=mRNA_H-elongata_contig16657.4177.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1740bp|location=Sequence derived from alignment at H-elongata_contig16657:1656..7235+ (Himanthalia elongata Himel1 dioecious)back to top |