mRNA_H-elongata_contig16636.4170.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A835ZFY6_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY6_9STRA) HSP 1 Score: 355 bits (910), Expect = 8.470e-120 Identity = 189/267 (70.79%), Postives = 218/267 (81.65%), Query Frame = 1
Query: 4 AAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
A+KV GV+KVLH D PA+ ++AEN +R V A A YTH+MA+S+MAGKNFIGRLG+E +PVTDVI+V++E TF RPMYAGNA+ATV A PLK+LTVRPTAF+K+ GG+A +E+A L + GL F+SESV RPDL ARVVVSGGRGMK+G++F MLE LADKLGGAVGASRAAVDAG+V NELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIF AD+GLV DLF AVPEL K+
Sbjct: 76 ASKVAGVAKVLHGDHPAYAHFLAENTSRGVRASAEAHKYTHVMAISSMAGKNFIGRLGAEMDLAPVTDVIKVVDESTFERPMYAGNAIATVTASDPLKLLTVRPTAFDKAPATGGSAAVEAAPLPAE-PETGLSKFVSESVSSSARPDLGAARVVVSGGRGMKNGENFAMLEALADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFTVADYGLVADLFTAVPELTKKL 341
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A4D9DEZ9_9STRA (Electron transfer flavoprotein subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEZ9_9STRA) HSP 1 Score: 315 bits (806), Expect = 5.610e-104 Identity = 172/268 (64.18%), Postives = 208/268 (77.61%), Query Frame = 1
Query: 1 QAAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
QAA+V GVSKVL A+ A+ K +AEN+++AV A AG Y+HI+A S+M KN++ R+ + P+TDVI + ++ TFVRPMYAGNA+ATV PLK+LTVR TAFEK+ + GG+A E A V +AGL +FLSESV RP+L+ ARVV+SGGRG+K +HF+MLE LADKL GAVGASRAAVD + NELQVGQTGKVVAP+LY+AVGISGAIQHLSGMKDSK IVAINKDKEAPIFQ AD+GLV DLF AVPEL K+
Sbjct: 78 QAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMHSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAK-PEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFKAVPELTDKV 344
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A067CIA0_SAPPC (Electron transfer flavoprotein subunit alpha n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CIA0_SAPPC) HSP 1 Score: 311 bits (798), Expect = 5.420e-103 Identity = 169/268 (63.06%), Postives = 202/268 (75.37%), Query Frame = 1
Query: 1 QAAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
+AA V GV VLHAD + +AE +T VAAVQ A S++HI+A S+ KNF+ RLG+ +P+TDV+ V++E TF RPMYAGNA+ATV + +K++T+RPT FEK+A GG+A + +A A A L F+SE +RPDL ARVVVSGGRGMK G++FEML LADKL GAVGASRAAVDAGFV NELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ +D+G+V DLF VPEL KI
Sbjct: 64 EAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASVSAAPTA---APANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFEMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A5D6Y5S8_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S8_9STRA) HSP 1 Score: 311 bits (797), Expect = 8.770e-103 Identity = 166/268 (61.94%), Postives = 204/268 (76.12%), Query Frame = 1
Query: 1 QAAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
QAAK+ GVS VLHA D + +AE +T + A Q A YTHI+A S+ A KN+I R+G++ +P++DV+ V +++TF RPMYAGNA+A V + +K+LTVRPT FEK+A GG+A + A G +F+SE V RPDLT ARVV++GGRG+K G +FE+L +LADKLGGAVGASRAAVDAG+V NELQVGQTGKVVAPELY+AVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ AD+GLV DLF AVPEL KI
Sbjct: 68 QAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQQANQYTHIVAPSSNASKNYIPRVGAKLDVAPISDVLAVADKDTFFRPMYAGNAIAKVTSSDAVKLLTVRPTGFEKAAAEGGSAAVSPA---PEAPTVGKTAFVSEEVSKSERPDLTSARVVIAGGRGLKSGDNFELLYKLADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 332
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A2D4CIU3_PYTIN (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIU3_PYTIN) HSP 1 Score: 310 bits (794), Expect = 2.120e-102 Identity = 163/267 (61.05%), Postives = 205/267 (76.78%), Query Frame = 1
Query: 4 AAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
AAK+ GVS VLHA D + +AE++T + A Q S++HI+A S+ A KN++ RLG++ +P++D+I V +++TF+RP YAGNA+A V++ +K++TVRPT FEK+A GG A + A A G F+SE V RPDLT ARVV+SGGRG+K G++F+ML +LADKLGGAVGASRAAVDAGFV NELQVGQTGKVVAPELY+AVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ +D+GLV DLF AVPEL KI
Sbjct: 64 AAKIAGVSNVLHAKDAKYDHLLAEDVTELLVATQKEKSFSHILAPSSNASKNYLPRLGAKLDTAPISDIIAVADKDTFLRPTYAGNAIAQVKSKDAVKIITVRPTGFEKAAAEGGNAAV---AAAPEAAATGKSQFVSEEVSKSERPDLTAARVVISGGRGLKSGENFDMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 327
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A024GNR0_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GNR0_9STRA) HSP 1 Score: 310 bits (793), Expect = 3.430e-102 Identity = 160/267 (59.93%), Postives = 207/267 (77.53%), Query Frame = 1
Query: 4 AAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
A ++ V+KVLHA+DP + +AEN+ + ++Q S++HI+A ++ + KN++ RLG++ +P++D+IQV+NE TFVRP YAGNA++ V++ +K++TVRPT FEK GG A E + VE D+ F+SE + RPDLT ARVV+SGGRG+K G++F++L +LADKLGGAVGASRAAVDAGFV NELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ AD+GLVGDLF +PEL KI
Sbjct: 67 ACQIPSVTKVLHANDPKYDHQLAENMVELLYSLQQVHSFSHILAPTSNSSKNYLPRLGAKLDVAPISDIIQVVNENTFVRPTYAGNAISKVQSVDAVKLITVRPTGFEKMGTEGGKAAAEQVSTVEF--DSSKSEFVSEQISKSERPDLTAARVVISGGRGLKSGENFDLLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVGDLFQLLPELTEKI 331
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A6G0XJ74_9STRA (Electron transfer flavoprotein subunit alpha n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ74_9STRA) HSP 1 Score: 308 bits (788), Expect = 1.780e-101 Identity = 171/267 (64.04%), Postives = 198/267 (74.16%), Query Frame = 1
Query: 4 AAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
AA V GV VLHAD +AE IT V VQ A ++THI+A S+ KNF+ R+G+ SP TDV+ V++E TF RPMYAGNA+ATV + +K+LTVRPT F+K+A GGA + +A AGL F+SE +RPDLT ARVVVSGGRGMK G++F +L LADKL GAVGASRAAVDAGFV NELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ AD+GLV DLF+AVPEL KI
Sbjct: 65 AASVQGVKSVLHADAAQFDHSLAEEITSLVVTVQKASNFTHIVAPSSNISKNFLPRVGAALDVSPFTDVLAVVDENTFQRPMYAGNAIATVTSSDAVKLLTVRPTGFDKAATTGGAGAVSAAPAAPV---AGLSRFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDGEAPIFQVADYGLVEDLFNAVPELTEKI 328
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A6U3UTA5_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3UTA5_9STRA) HSP 1 Score: 308 bits (789), Expect = 2.410e-101 Identity = 166/268 (61.94%), Postives = 205/268 (76.49%), Query Frame = 1
Query: 1 QAAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
QAA V GV ++ +D +AEN +RAV A + Y+H+MA S+ KN++ R+ E +P+TDVI++L E+TFVRPMYAGN++AT+++ +K+L++R TAF+K A+ GG+A +E L E DAGL +F S S RPDLT A VVVSGGRGMK G++F MLE LADKLGGAVGASRAAVDAG+V NELQVGQTGKVVAP+LYIAVGISGAIQHLSGMKDSK IVAINKD EAPIFQ AD+GLV DLF+AVPE+ SK+
Sbjct: 82 QAAAVAGVGNIITGNDAGLETGLAENFSRAVVAAAKSKGYSHVMAPSSNFTKNYLPRVAIELDSAPMTDVIEILGEDTFVRPMYAGNSLATIKSQDSVKLLSIRTTAFDKCADSGGSAEMEDLVL-EGTCDAGLSAFKSASASESERPDLTAASVVVSGGRGMKSGENFGMLEELADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPDLYIAVGISGAIQHLSGMKDSKTIVAINKDAEAPIFQVADYGLVQDLFNAVPEISSKV 348
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: A0A8K1FT05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT05_PYTOL) HSP 1 Score: 307 bits (787), Expect = 2.440e-101 Identity = 164/267 (61.42%), Postives = 205/267 (76.78%), Query Frame = 1
Query: 4 AAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
AAK+ GVS VLHA D +AE++T + A Q +++HI+A S+ A KN++ RLG++ +P++D+I V +++TFVRP YAGNA+A V++ +K++TVRPT FEK+A GG+A + +A A AG F+SE V RPDL ARVV+SGGRG+K G++FEML +LADKLGGAVGASRAAVDAGFV NELQVGQTGKVVAPELY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQ AD+GLV DLF AVPEL KI
Sbjct: 64 AAKIAGVSNVLHAKDAKFDHLIAEDVTELLLATQKEKNFSHILAPSSNASKNYLPRLGAKLDSAPISDIIAVADKDTFVRPTYAGNAIAQVKSSDAVKLITVRPTGFEKAAVEGGSASVSAA---PEAAAAGKTQFVSEEVSKSERPDLGSARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 327
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Match: K3WS82_GLOUD (Electron transfer flavoprotein subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS82_GLOUD) HSP 1 Score: 306 bits (785), Expect = 5.240e-101 Identity = 161/268 (60.07%), Postives = 205/268 (76.49%), Query Frame = 1
Query: 1 QAAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAGKNFIGRLGSEFGCSPVTDVIQVLNEETFVRPMYAGNAVATVRAPGPLKVLTVRPTAFEKSANIGGAAPIESAALVEHGADAGLGSFLSESVGGGNRPDLTVARVVVSGGRGMKDGKHFEMLERLADKLGGAVGASRAAVDAGFVANELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADFGLVGDLFDAVPELESKI 804
QAAK+ GVS VLHA D + +AE +T + A Q ++THI+A S+ A KN++ R+G++ +P++D++ V +++TF+RP YAGNA+A +++ +K++TVRPT FEK+A GG+A + A A G F+SE V +RPDLT ARVVVSGGRG+K G++FEML +LADKL GAVGASRAAVDAG+V NELQVGQTGKVVAPELYIA GISGAIQHL+GMKDSK IVAINKD+EAPIFQ +D+GLV DLF AVPEL KI
Sbjct: 65 QAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQKEKNFTHILAPSSNASKNYLPRVGAKLDVAPISDILAVADKDTFLRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAATEGGSASVSPA---PEAATVGKTQFVSEEVSKSDRPDLTSARVVVSGGRGLKSGENFEMLYKLADKLNGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16636.4170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16636.4170.1 >prot_H-elongata_contig16636.4170.1 ID=prot_H-elongata_contig16636.4170.1|Name=mRNA_H-elongata_contig16636.4170.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp QAAKVLGVSKVLHADDPAHGKWVAENITRAVAAVQTAGSYTHIMALSTMAback to top mRNA from alignment at H-elongata_contig16636:5651..6991- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16636.4170.1 ID=mRNA_H-elongata_contig16636.4170.1|Name=mRNA_H-elongata_contig16636.4170.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1341bp|location=Sequence derived from alignment at H-elongata_contig16636:5651..6991- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16636:5651..6991- >mRNA_H-elongata_contig16636.4170.1 ID=mRNA_H-elongata_contig16636.4170.1|Name=mRNA_H-elongata_contig16636.4170.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1614bp|location=Sequence derived from alignment at H-elongata_contig16636:5651..6991- (Himanthalia elongata Himel1 dioecious)back to top |