mRNA_H-elongata_contig16636.4169.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16636.4169.1
Unique NamemRNA_H-elongata_contig16636.4169.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: D8LPP9_ECTSI (CCCH-type Zn finger-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPP9_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 3.360e-79
Identity = 243/674 (36.05%), Postives = 311/674 (46.14%), Query Frame = 2 
Query:  152 VFGTGAGFGG--------GYGDSGADNAPHSFEQP-----TSAPL----------PTPQPGLGFGASP--GDCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQHPV-GAGRGHGRSGPGSRFATGRXXXXXXXXXXXXXXSSRIPT-EAVDRSKQTCVFFVQGKCTKGDACQFSHATSPDNGPGQAFHKGIGPSSETERAGPPKEHVKPFAEQPLSAMEIIRNGNVAQQQKGSKFSVKGPEERVPAVRGSGVSSSSPKGM-------------EIGSDPFSAGPPVMIGGDGKTYVVGPDGLVPLDDVMRTIAVTAKEHTRYTPSSASCNAATVEPCQQSTVDVKTDRAHDTGMSQSLPSQSLDKAPGKSGILTLPDGGFVTRKRAAEMQLLRNGGSGQDLRCVRQRDAEEKVNQQERRFGKADGRTVPQAVGKPSIMDRLGPAKQS--TLASREKAVGPARIRPEISSQLGRNREEPRQQSAPVDRLRDGSRVNRPSPLSRPQTLGTARPTRRSDDASGLGTFGGKT-AVAR--MVVNHKPASLDFKISTLDEIKSRKAMAGEAVTEATARKTAKM------QEIKVANAVDHAVEVGSSHGIAAASSLSSVAGSTKEDVSEVAPAVP---------VPNDALQLEADDMIEFRQWL 1993
            +FGTG GF          G+G      A  + E P     T+ P           P+P PG    A+P  GDC+YFLQGTC KG+NCLFRH+ AA+A+GI+CRFWQNGFCKD  +C F HPV G G G GR G   RF  G X       XXXX    R+   E VDRSKQTCVFFVQGKCTKGDAC FSHA   + G  QA      P       G P+      +  P+ A    RN +V Q +  +  + +G E +   + G   +S    G                G     A P + +   GK YV   +G                                                      Q+  + S D+     GI+ LPDGG VTRKRAAE+QL ++     + R VRQRD  E+   QERR        +P  VG+  I+DRLGP  Q+  T  + E  V PARIR E  +   R REEPR    PV+R   G + +  S L R + + +A PTRR+    G G  G  T A+AR  +V   K ++LDFKI TLDEIKSRKA A  A    T ++          + +    A   AVE        A +S +SV  +T      V P++P         V +D  QL+A+DM EF +WL
Sbjct:    1 MFGTGGGFXXXXXXVPTPGFGQRETTPAVGAAETPGGQVSTAQPFGQQASGTNAAPSPNPGKIAAAAPAAGDCYYFLQGTCTKGNNCLFRHSEAARASGIVCRFWQNGFCKDDVNCPFLHPVRGQGMGGGRGG---RFGGGXXMAAGRGGXXXXRGGPRLQGWETVDRSKQTCVFFVQGKCTKGDACPFSHAIPSEGGVSQAAEANHLPQRAAVPEGRPQPPAMDSSPAPVPA---ARNDSVPQTKTSASEASRGEETKANGIPGQSSASVRVSGAGREEARSFSRRVGAFGDGASKADPALAVASAGKAYVTARNG------------------------------------------------------QARATSSSDQRQEAPGIIVLPDGGLVTRKRAAELQLRKDERGDAEARNVRQRDGREQGRAQERRPTSGSRGVLP--VGRVPILDRLGPVTQASDTAPTTEWIVAPARIRREAPTLQARKREEPRPHVTPVER--PGLQPSSSSSLPRSRVMASALPTRRTGGGRGAG--GDSTSAIARPAVVAQRKSSALDFKIPTLDEIKSRKAKAEVAAPRVTTKRDQAFSASNGEKPMSATPAAPDAVEE-------APTSPNSVVSTTVG----VQPSLPLXXXXXXXTVQSDPPQLDAEDMDEFSEWL 597
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: A0A401SVC6_CHIPU (C3H1-type domain-containing protein n=5 Tax=Chiloscyllium TaxID=34767 RepID=A0A401SVC6_CHIPU)

HSP 1 Score: 59.3 bits (142), Expect = 2.470e-5
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQH 436
            DC+++   TCAKGDNCLFRH  AA  +  +C  WQ G C     C F+H
Sbjct:    7 DCYFYFYSTCAKGDNCLFRHCEAALGSETICTLWQEGRCFRQV-CKFRH 54
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: UPI001B7F2FAE (zinc finger CCCH domain-containing protein 11A isoform X1 n=3 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7F2FAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.470e-5
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQH 436
            DC+++   TCAKGDNCLFRH  AA  +  +C  WQ G C     C F+H
Sbjct:    7 DCYFYFYSTCAKGDNCLFRHCEAALGSETICTLWQEGRCFRQV-CKFRH 54
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: A0A401PHY5_SCYTO (C3H1-type domain-containing protein n=3 Tax=Scyliorhinus TaxID=7829 RepID=A0A401PHY5_SCYTO)

HSP 1 Score: 59.3 bits (142), Expect = 2.480e-5
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQH 436
            DC+++   TCAKGDNCLFRH  AA  +  +C  WQ G C     C F+H
Sbjct:    7 DCYFYFYSTCAKGDNCLFRHCEAALGSETICTLWQEGRCFRQV-CKFRH 54
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: UPI001CF556ED (zinc finger CCCH domain-containing protein 11A-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF556ED)

HSP 1 Score: 59.3 bits (142), Expect = 2.590e-5
Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQHPV 442
            DC+++   TCAKGD+C +RH  AA  N I C  W+ G C     C F+H V
Sbjct:    7 DCYFYYYSTCAKGDDCPYRHQPAALGNEITCELWEKGICSRKV-CKFRHSV 56
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: A0A139WJ07_TRICA (Zinc finger CCCH domain-containing protein 11A-like Protein n=4 Tax=Tribolium TaxID=7069 RepID=A0A139WJ07_TRICA)

HSP 1 Score: 57.4 bits (137), Expect = 5.270e-5
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQH 436
            DC+++   TCAKGDNC FRH  +A     +C FW+ G C +   C+F+H
Sbjct:   26 DCYFYYYSTCAKGDNCTFRHEPSALGCETMCSFWKEGKCLNV-HCNFRH 73
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: A0A8J6HBZ5_TENMO (C3H1-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HBZ5_TENMO)

HSP 1 Score: 57.4 bits (137), Expect = 5.590e-5
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQH 436
            DC+++   TCAKGDNC FRH  +A     +C FW+ G C +   C+F+H
Sbjct:   12 DCYFYYYSTCAKGDNCTFRHEPSALGCETMCSFWKEGKCLNV-HCNFRH 59
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: A0A482VXP9_9CUCU (Zinc finger CCCH domain-containing protein 11A-like n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VXP9_9CUCU)

HSP 1 Score: 57.4 bits (137), Expect = 6.060e-5
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQH 436
            DC+++   TCAKGDNC FRH  +A     +C FW+ G C +   C+F+H
Sbjct:   24 DCYFYYYSTCAKGDNCTFRHEPSALGCETMCSFWKEGKCLNV-HCNFRH 71
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BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Match: UPI000C251F32 (zinc finger CCCH domain-containing protein 11A-like isoform X1 n=3 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C251F32)

HSP 1 Score: 57.4 bits (137), Expect = 6.980e-5
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 2 
Query:  290 DCHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQH 436
            DC+++   TCAKGDNC FRH  +A     +C FW+ G C +   C+F+H
Sbjct:   44 DCYFYYYSTCAKGDNCTFRHEPSALGCETMCSFWKEGKCLNV-HCNFRH 91
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16636.4169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LPP9_ECTSI3.360e-7936.05CCCH-type Zn finger-containing protein n=2 Tax=Ect... [more]
A0A401SVC6_CHIPU2.470e-548.98C3H1-type domain-containing protein n=5 Tax=Chilos... [more]
UPI001B7F2FAE2.470e-548.98zinc finger CCCH domain-containing protein 11A iso... [more]
A0A401PHY5_SCYTO2.480e-548.98C3H1-type domain-containing protein n=3 Tax=Scylio... [more]
UPI001CF556ED2.590e-545.10zinc finger CCCH domain-containing protein 11A-lik... [more]
A0A139WJ07_TRICA5.270e-544.90Zinc finger CCCH domain-containing protein 11A-lik... [more]
A0A8J6HBZ5_TENMO5.590e-544.90C3H1-type domain-containing protein n=1 Tax=Tenebr... [more]
A0A482VXP9_9CUCU6.060e-544.90Zinc finger CCCH domain-containing protein 11A-lik... [more]
UPI000C251F326.980e-544.90zinc finger CCCH domain-containing protein 11A-lik... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16636contigH-elongata_contig16636:1767..5421 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.6
Seed ortholog evalue1.1e-73
Seed eggNOG ortholog2880.D8LPP9
KEGG koko:K22415
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0097159,GO:1901363
EggNOG free text desc.DNA binding
EggNOG OGsKOG4791@1,KOG4791@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCCCH-type Zn finger-containing protein
Ec32 orthologEc-18_002010.1
Exons3
Model size2151
Cds size1854
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16636.4169.1prot_H-elongata_contig16636.4169.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16636 1909..5266 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929973.895232-UTR-H-elongata_contig16636:1766..19081622929973.895232-UTR-H-elongata_contig16636:1766..1908Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16636 1767..1908 +
1691679230.390325-UTR-H-elongata_contig16636:1766..19081691679230.390325-UTR-H-elongata_contig16636:1766..1908Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16636 1767..1908 +
1622929973.9468994-UTR-H-elongata_contig16636:5266..54211622929973.9468994-UTR-H-elongata_contig16636:5266..5421Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16636 5267..5421 +
1691679230.433779-UTR-H-elongata_contig16636:5266..54211691679230.433779-UTR-H-elongata_contig16636:5266..5421Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16636 5267..5421 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929973.9094453-CDS-H-elongata_contig16636:1908..20911622929973.9094453-CDS-H-elongata_contig16636:1908..2091Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16636 1909..2091 +
1691679230.4070175-CDS-H-elongata_contig16636:1908..20911691679230.4070175-CDS-H-elongata_contig16636:1908..2091Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16636 1909..2091 +
1622929973.922316-CDS-H-elongata_contig16636:2971..30941622929973.922316-CDS-H-elongata_contig16636:2971..3094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16636 2972..3094 +
1691679230.4176888-CDS-H-elongata_contig16636:2971..30941691679230.4176888-CDS-H-elongata_contig16636:2971..3094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16636 2972..3094 +
1622929973.9347959-CDS-H-elongata_contig16636:3718..52661622929973.9347959-CDS-H-elongata_contig16636:3718..5266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16636 3719..5266 +
1691679230.4254923-CDS-H-elongata_contig16636:3718..52661691679230.4254923-CDS-H-elongata_contig16636:3718..5266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16636 3719..5266 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16636.4169.1

>prot_H-elongata_contig16636.4169.1 ID=prot_H-elongata_contig16636.4169.1|Name=mRNA_H-elongata_contig16636.4169.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=618bp
MAHVFGTGAGFGGGYGDSGADNAPHSFEQPTSAPLPTPQPGLGFGASPGD
CHYFLQGTCAKGDNCLFRHNHAAKANGILCRFWQNGFCKDAASCSFQHPV
GAGRGHGRSGPGSRFATGRGMSGMRGAFSGGRGSSRIPTEAVDRSKQTCV
FFVQGKCTKGDACQFSHATSPDNGPGQAFHKGIGPSSETERAGPPKEHVK
PFAEQPLSAMEIIRNGNVAQQQKGSKFSVKGPEERVPAVRGSGVSSSSPK
GMEIGSDPFSAGPPVMIGGDGKTYVVGPDGLVPLDDVMRTIAVTAKEHTR
YTPSSASCNAATVEPCQQSTVDVKTDRAHDTGMSQSLPSQSLDKAPGKSG
ILTLPDGGFVTRKRAAEMQLLRNGGSGQDLRCVRQRDAEEKVNQQERRFG
KADGRTVPQAVGKPSIMDRLGPAKQSTLASREKAVGPARIRPEISSQLGR
NREEPRQQSAPVDRLRDGSRVNRPSPLSRPQTLGTARPTRRSDDASGLGT
FGGKTAVARMVVNHKPASLDFKISTLDEIKSRKAMAGEAVTEATARKTAK
MQEIKVANAVDHAVEVGSSHGIAAASSLSSVAGSTKEDVSEVAPAVPVPN
DALQLEADDMIEFRQWL*
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mRNA from alignment at H-elongata_contig16636:1767..5421+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16636.4169.1 ID=mRNA_H-elongata_contig16636.4169.1|Name=mRNA_H-elongata_contig16636.4169.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3655bp|location=Sequence derived from alignment at H-elongata_contig16636:1767..5421+ (Himanthalia elongata Himel1 dioecious)
ACTTGTTACAGTGCTGTGAAGCATTTGTCTATCTCTACCCAGTGTTTTGT
AATCGTTCCCTTAGTAACAGATTCGTCGATTTCCTGGAGAACAGCGAGTC
AGACTAGCGAGGGTTCGACGTCTATCTTCAATAGCTCCATCCATGGCTCA
TGTGTTCGGGACAGGGGCTGGCTTTGGGGGTGGCTATGGCGATTCGGGCG
CCGACAACGCGCCTCACAGCTTTGAACAACCGACAAGTGCACCATTACCA
ACCCCTCAACCCGGTCTCGGCTTTGGTGCTTCTCCTGGCGATTGTCACTA
CTTCCTTCAAGGAACTTGTGCCAAGGTAAGTAGAGTCGACCGATTATTCC
TGTGAGTAAACAAACTACATAGGTTTTATTTTAAAAAGCCTCATCCTCAC
TCGGAATAAGCCCGTTATTTCCTGACAAAGAGTCGCGTGAAGCACCAAGA
TCGGCCTACAGCTCTAGAGCTAATCACGGTGTAGCATCGATCGTGGTGGT
CACGCTAATCCCGAACGAGGAATATATAACTGCCAGAAATGTTTTCGCTG
AGTGGTTGGTCCTGGGTCCTGGTACTCTTCGAGTCCTAGCTACTACTAAG
ATCGAAGAATGGCGAGGAATACGTCCACATATTATCACAATTTGCCCCTC
TCGAACCCCGCTTGTGGTTTGCTCAATGCTCAACGCTCAACCGGTGAAGC
TTTCCAACATCCAACACATGACTTACGAGAGCTTGATTTATAATGATTTA
CCGCTGACAAACATACATCAGTGCAAGTAGGAACAGGTGATTGGAATATT
TATTTTAAAATATACCGGTATAAACTAATTCCAACCCTCCTAACATTCAG
ACCTTCTTTGCACCATGAGAGGTGACGTCCAGGGGACCAACTTTCGTCAG
GTTCGAGTGTATACTGTTCATAGTTTTTCTCATTTGATTTCTCGTAGCGA
TACCCCTAACCAGGATTCTGCACCCAGATGGTATACAGTATATGTTAAGT
TAAGCGACTTAACACTGGCCTTGAACTTCCAAGCACTACTCTCTGTACAG
TCAGTCGAACATGGCCAGAACACGTCTTGAAATAACATTCCAGGCAACGG
CGAACCCGGGAACAGTGTAATATTTATATCACTACATTCATACTTTAAAT
ATTATCCTGTATGGGCCTGCTATTTGCGTATTGTAATAAACATCGTTATC
CACAGGGTGACAACTGCCTCTTCCGACACAACCACGCTGCCAAGGCAAAT
GGCATCTTGTGCCGATTCTGGCAAAACGGCTTCTGCAAGGATGCTGCCAG
CTGTTCTTTTCAACACCCAGTGGGAGCGGTGAGCAAACTTCCCCAGTAGC
CAAGTTGGACATGTTCCTACCGCAGCTGGCCCTTGTTTTCCCATGAAAAA
CGTATGAACTAATTTCAACCCTCTAAACATCCACACATCTACGTCTTCTT
AGCACCGTAAAGGGTGCAGTCCAGGGGATCAACTACCTTTGATTATTCGC
CTTCGTTATATCCCGATTTGGCTAATCAACGCCTAACTTACCAGGACCTT
GCCCATCCCGCATAGTCTTACCAGATAAAGGCATAGGGGCCGGGGGTCGG
ACCATCCCATATACACCCGTCCGTCTTCTGGGAATCTTGCTGAACTTTGA
AGCTGACTCAATTCTTGAGATGTTTCACTTCATTTTCAGCGTAATGCCAT
CAGTTTTTGTTATTTTAGTATTTTAAACGTTCGCGTAACTTCAGCCTCAA
AATGGTCGTGCCGCGATTTCAGACAAAACTGTATTGCAAAATATCTTAAC
GTTTTTTGTCCAAATGTATTGCCCAACACCGCTTCTCTGACGTATGGTTG
TGTTGCCCTTTCTCGTGTGTGTTTTCGGGGTAATCTCCCGGTGATTTTGG
TGAATTCTGTCCCGTCCCATATACGGCGCGCGTGTCCGACGGCGATGTCC
AGGGGCGGGGACATGGGCGATCCGGACCTGGAAGTCGTTTTGCAACTGGA
CGAGGAATGAGTGGTATGCGTGGTGCATTTAGCGGTGGTCGAGGAAGCTC
CCGTATACCGACAGAGGCGGTGGATCGCAGCAAGCAAACATGCGTTTTTT
TCGTCCAGGGAAAATGCACGAAAGGTGATGCTTGTCAGTTCAGCCATGCG
ACTTCTCCGGACAACGGCCCAGGGCAAGCATTTCACAAAGGAATCGGACC
TAGCAGCGAAACAGAGCGCGCGGGCCCTCCGAAGGAGCATGTCAAACCGT
TTGCCGAGCAGCCTTTGTCGGCAATGGAAATAATTCGTAATGGCAATGTG
GCTCAGCAACAGAAGGGGAGCAAATTTTCCGTCAAGGGGCCAGAAGAGCG
TGTTCCAGCCGTGCGCGGAAGCGGCGTCAGTTCGTCATCGCCTAAGGGTA
TGGAAATCGGATCTGACCCCTTCTCAGCGGGCCCACCCGTTATGATCGGG
GGCGACGGAAAAACTTACGTAGTTGGTCCTGATGGTCTGGTTCCGCTTGA
CGATGTGATGCGCACGATAGCGGTTACAGCTAAGGAGCATACTAGATATA
CCCCTTCATCAGCTTCGTGTAATGCAGCAACGGTTGAGCCTTGCCAGCAG
AGCACGGTGGACGTAAAAACTGATCGCGCGCATGATACCGGTATGTCCCA
GTCGTTACCATCACAATCGCTCGATAAAGCTCCAGGGAAGTCAGGAATAT
TAACTCTGCCCGACGGTGGCTTTGTCACGCGAAAGAGGGCGGCAGAAATG
CAACTCCTCAGGAACGGTGGCAGCGGCCAAGATCTCAGATGCGTACGACA
GCGAGATGCTGAAGAGAAGGTAAATCAGCAAGAGCGTAGGTTTGGAAAGG
CGGATGGGAGGACGGTGCCACAAGCGGTCGGCAAGCCATCAATTATGGAT
CGTTTAGGCCCAGCTAAGCAATCCACGTTAGCATCCAGGGAGAAGGCAGT
GGGTCCCGCCAGGATTCGACCGGAAATCTCTAGCCAGCTAGGGAGAAATC
GAGAGGAACCGCGCCAGCAGAGTGCGCCCGTAGATCGCCTTAGGGATGGA
TCGCGGGTGAACCGACCCTCTCCGTTGTCAAGACCACAGACTCTTGGCAC
CGCGCGGCCGACGAGGCGCTCGGACGACGCCTCAGGATTAGGAACATTTG
GAGGGAAGACAGCGGTTGCGAGGATGGTTGTCAACCACAAGCCGGCTTCT
CTAGACTTCAAGATTTCCACTCTAGACGAGATCAAGAGCAGAAAGGCAAT
GGCGGGCGAAGCAGTAACGGAGGCAACCGCGCGGAAGACTGCAAAGATGC
AAGAAATCAAGGTCGCAAATGCTGTTGATCACGCAGTAGAAGTAGGCAGT
TCCCATGGAATAGCAGCTGCCTCGTCGCTTTCATCTGTCGCTGGCAGTAC
CAAGGAAGATGTCTCTGAAGTAGCGCCGGCAGTACCTGTACCCAATGATG
CTTTGCAACTCGAAGCCGATGATATGATCGAGTTTCGTCAATGGCTCTAG
TGGAAGTGTGATATTTTGCGTGCTCGTTACGTGTACGAGATATGGTACAG
AAGTTAATTAAAAATACACCTGGGAGTGCCTCGACTTGCTTTGCATGTTA
GAAGGCACGCAAGACAGGCCAAGTTGAAATAAAGGTTGTTATCATCAGGC
AGCAC
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Coding sequence (CDS) from alignment at H-elongata_contig16636:1767..5421+

>mRNA_H-elongata_contig16636.4169.1 ID=mRNA_H-elongata_contig16636.4169.1|Name=mRNA_H-elongata_contig16636.4169.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3708bp|location=Sequence derived from alignment at H-elongata_contig16636:1767..5421+ (Himanthalia elongata Himel1 dioecious)
ATGGCTCATGTGTTCGGGACAGGGGCTGGCTTTGGGGGTGGCTATGGCGA
TTCGGGCGCCGACAACGCGCCTCACAGCTTTGAACAACCGACAAGTGCAC
CATTACCAACCCCTCAACCCGGTCTCGGCTTTGGTGCTTCTCCTGGCGAT
TGTCACTACTTCCTTCAAGGAACTTGTGCCAAGATGGCTCATGTGTTCGG
GACAGGGGCTGGCTTTGGGGGTGGCTATGGCGATTCGGGCGCCGACAACG
CGCCTCACAGCTTTGAACAACCGACAAGTGCACCATTACCAACCCCTCAA
CCCGGTCTCGGCTTTGGTGCTTCTCCTGGCGATTGTCACTACTTCCTTCA
AGGAACTTGTGCCAAGGGTGACAACTGCCTCTTCCGACACAACCACGCTG
CCAAGGCAAATGGCATCTTGTGCCGATTCTGGCAAAACGGCTTCTGCAAG
GATGCTGCCAGCTGTTCTTTTCAACACCCAGTGGGAGCGGGTGACAACTG
CCTCTTCCGACACAACCACGCTGCCAAGGCAAATGGCATCTTGTGCCGAT
TCTGGCAAAACGGCTTCTGCAAGGATGCTGCCAGCTGTTCTTTTCAACAC
CCAGTGGGAGCGGGGCGGGGACATGGGCGATCCGGACCTGGAAGTCGTTT
TGCAACTGGACGAGGAATGAGTGGTATGCGTGGTGCATTTAGCGGTGGTC
GAGGAAGCTCCCGTATACCGACAGAGGCGGTGGATCGCAGCAAGCAAACA
TGCGTTTTTTTCGTCCAGGGAAAATGCACGAAAGGTGATGCTTGTCAGTT
CAGCCATGCGACTTCTCCGGACAACGGCCCAGGGCAAGCATTTCACAAAG
GAATCGGACCTAGCAGCGAAACAGAGCGCGCGGGCCCTCCGAAGGAGCAT
GTCAAACCGTTTGCCGAGCAGCCTTTGTCGGCAATGGAAATAATTCGTAA
TGGCAATGTGGCTCAGCAACAGAAGGGGAGCAAATTTTCCGTCAAGGGGC
CAGAAGAGCGTGTTCCAGCCGTGCGCGGAAGCGGCGTCAGTTCGTCATCG
CCTAAGGGTATGGAAATCGGATCTGACCCCTTCTCAGCGGGCCCACCCGT
TATGATCGGGGGCGACGGAAAAACTTACGTAGTTGGTCCTGATGGTCTGG
TTCCGCTTGACGATGTGATGCGCACGATAGCGGTTACAGCTAAGGAGCAT
ACTAGATATACCCCTTCATCAGCTTCGTGTAATGCAGCAACGGTTGAGCC
TTGCCAGCAGAGCACGGTGGACGTAAAAACTGATCGCGCGCATGATACCG
GTATGTCCCAGTCGTTACCATCACAATCGCTCGATAAAGCTCCAGGGAAG
TCAGGAATATTAACTCTGCCCGACGGTGGCTTTGTCACGCGAAAGAGGGC
GGCAGAAATGCAACTCCTCAGGAACGGTGGCAGCGGCCAAGATCTCAGAT
GCGTACGACAGCGAGATGCTGAAGAGAAGGTAAATCAGCAAGAGCGTAGG
TTTGGAAAGGCGGATGGGAGGACGGTGCCACAAGCGGTCGGCAAGCCATC
AATTATGGATCGTTTAGGCCCAGCTAAGCAATCCACGTTAGCATCCAGGG
AGAAGGCAGTGGGTCCCGCCAGGATTCGACCGGAAATCTCTAGCCAGCTA
GGGAGAAATCGAGAGGAACCGCGCCAGCAGAGTGCGCCCGTAGATCGCCT
TAGGGATGGATCGCGGGTGAACCGACCCTCTCCGTTGTCAAGACCACAGA
CTCTTGGCACCGCGCGGCCGACGAGGCGCTCGGACGACGCCTCAGGATTA
GGAACATTTGGAGGGAAGACAGCGGTTGCGAGGATGGTTGTCAACCACAA
GCCGGCTTCTCTAGACTTCAAGATTTCCACTCTAGACGAGATCAAGAGCA
GAAAGGCAATGGCGGGCGAAGCAGTAACGGAGGCAACCGCGCGGAAGACT
GCAAAGATGCAAGAAATCAAGGTCGCAAATGCTGTTGATCACGCAGTAGA
AGTAGGCAGTTCCCATGGAATAGCAGCTGCCTCGTCGCTTTCATCTGTCG
CTGGCAGTACCAAGGAAGATGTCTCTGAAGTAGCGCCGGCAGTACCTGTA
CCCAATGATGCTTTGCAACTCGAAGCCGATGATATGATCGAGTTTCGTCA
ATGGCTCTAGGGGCGGGGACATGGGCGATCCGGACCTGGAAGTCGTTTTG
CAACTGGACGAGGAATGAGTGGTATGCGTGGTGCATTTAGCGGTGGTCGA
GGAAGCTCCCGTATACCGACAGAGGCGGTGGATCGCAGCAAGCAAACATG
CGTTTTTTTCGTCCAGGGAAAATGCACGAAAGGTGATGCTTGTCAGTTCA
GCCATGCGACTTCTCCGGACAACGGCCCAGGGCAAGCATTTCACAAAGGA
ATCGGACCTAGCAGCGAAACAGAGCGCGCGGGCCCTCCGAAGGAGCATGT
CAAACCGTTTGCCGAGCAGCCTTTGTCGGCAATGGAAATAATTCGTAATG
GCAATGTGGCTCAGCAACAGAAGGGGAGCAAATTTTCCGTCAAGGGGCCA
GAAGAGCGTGTTCCAGCCGTGCGCGGAAGCGGCGTCAGTTCGTCATCGCC
TAAGGGTATGGAAATCGGATCTGACCCCTTCTCAGCGGGCCCACCCGTTA
TGATCGGGGGCGACGGAAAAACTTACGTAGTTGGTCCTGATGGTCTGGTT
CCGCTTGACGATGTGATGCGCACGATAGCGGTTACAGCTAAGGAGCATAC
TAGATATACCCCTTCATCAGCTTCGTGTAATGCAGCAACGGTTGAGCCTT
GCCAGCAGAGCACGGTGGACGTAAAAACTGATCGCGCGCATGATACCGGT
ATGTCCCAGTCGTTACCATCACAATCGCTCGATAAAGCTCCAGGGAAGTC
AGGAATATTAACTCTGCCCGACGGTGGCTTTGTCACGCGAAAGAGGGCGG
CAGAAATGCAACTCCTCAGGAACGGTGGCAGCGGCCAAGATCTCAGATGC
GTACGACAGCGAGATGCTGAAGAGAAGGTAAATCAGCAAGAGCGTAGGTT
TGGAAAGGCGGATGGGAGGACGGTGCCACAAGCGGTCGGCAAGCCATCAA
TTATGGATCGTTTAGGCCCAGCTAAGCAATCCACGTTAGCATCCAGGGAG
AAGGCAGTGGGTCCCGCCAGGATTCGACCGGAAATCTCTAGCCAGCTAGG
GAGAAATCGAGAGGAACCGCGCCAGCAGAGTGCGCCCGTAGATCGCCTTA
GGGATGGATCGCGGGTGAACCGACCCTCTCCGTTGTCAAGACCACAGACT
CTTGGCACCGCGCGGCCGACGAGGCGCTCGGACGACGCCTCAGGATTAGG
AACATTTGGAGGGAAGACAGCGGTTGCGAGGATGGTTGTCAACCACAAGC
CGGCTTCTCTAGACTTCAAGATTTCCACTCTAGACGAGATCAAGAGCAGA
AAGGCAATGGCGGGCGAAGCAGTAACGGAGGCAACCGCGCGGAAGACTGC
AAAGATGCAAGAAATCAAGGTCGCAAATGCTGTTGATCACGCAGTAGAAG
TAGGCAGTTCCCATGGAATAGCAGCTGCCTCGTCGCTTTCATCTGTCGCT
GGCAGTACCAAGGAAGATGTCTCTGAAGTAGCGCCGGCAGTACCTGTACC
CAATGATGCTTTGCAACTCGAAGCCGATGATATGATCGAGTTTCGTCAAT
GGCTCTAG
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