mRNA_H-elongata_contig16500.4099.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16500.4099.1
Unique NamemRNA_H-elongata_contig16500.4099.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: D8LI72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI72_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 1.550e-142
Identity = 267/533 (50.09%), Postives = 318/533 (59.66%), Query Frame = 2
Query:  722 MEKLVVAERRKRARSAPLAPLRCHVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERLLNPSARMHPLPPETNTDVKRSSTVGCPNSSFHQCGEMTENTLAGKTALVT------EKSTHDSTAVGFQREMQEEE--GRGGDRARE----LQRLEKLFSTDGDDRSLPGKFASMIGRIGAEERKLVAWVDHCACLPRYLSTREEVSASVRRAEAILVS--EMGMAE-------SRGWSGRPGVVTVARSVGDGYVPVDMVGFVEGEVLAMLKRLFG-DGADPAIGVGG-MEVIYEDGME 2251
            ME+  VA  RKRAR  P   LRC++VDDHCDAL  IH AIR  ALPF G+S +H+DAHPDLMV P+M A  CF P ELYD L+ +EGGIAEWILP+V+QGHLS LWW+RP WARQF DGD+RF VG+V+ TG LRVSSTAPYFVDD LYC EE M +CKP+HL VS   +   S +                   C T                GAE                DYFT ENPFILELE  +GK DA +VR FY  P FRGA T LPH+ Q+EHE +FK+EV+RLL  +            +   + T G    +    G  +++   G            E     ST V  + + +EE   G GG  A +    L+RL +LF  DG+DR L GKFAS++GRIG E R+ VAW DHCACLPR+L+TREEV  +VR  EA L S  E G A        S  WSGRPGV+TVARS  DGYVP  MV FVE EVLAML RL+G DGA+   G GG +EV YEDG+E
Sbjct:    1 MERTRVAG-RKRARPTP--SLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLAQTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMHECKPLHLCVSLVPDNLPSPAE------------------CLT----------------GAELQ--------------DYFTTENPFILELEDHLGKRDAAVVRDFYGRPRFRGAATPLPHETQLEHEHIFKTEVDRLLGAAGEES----ANGAEQPAADTKGEAERAIVAGGTASKDLAEGSPGAARSGRFPGEVVVDGSTPVSEEADTREEADGGGGGSGASQEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVAWADHCACLPRHLATREEVKGAVRSVEAFLRSLLEGGTATTXXXXXXSANWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEGVAGRGGGLEVCYEDGLE 478          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A024UGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGZ0_9STRA)

HSP 1 Score: 181 bits (459), Expect = 7.760e-47
Identity = 103/281 (36.65%), Postives = 139/281 (49.47%), Query Frame = 2
Query:  782 LRCHVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERLLNPSARMH 1624
            +R  VVDDH  AL+ IH AIRRR LPF   +++H+DAHPDL  P ++ A + F P +LYD L  SE GIA ++LP+ F GH+  L W++PPWA+Q   GD  F+VG+  D G L V+S   YFVD+ +Y PE  +                                K+  ++  CE               H    S+      P+VLDICLDYFT  NPF+ E E   G DDA ++R  Y    F+     L H  Q+EH R   S +  ++      H
Sbjct:    5 MRVVVVDDHHHALEPIHQAIRRRVLPFANWTLVHFDAHPDLAFPRDVPAKSVFTPSQLYDVLDASEAGIASFVLPLSFAGHMESLIWVKPPWAQQMTLGDQAFAVGEHIDNGTLCVTSNHSYFVDEAMYAPESELTK------------------------------KQTLQLTVCEL--------------HDSPASSVRPPLGPFVLDICLDYFTTLNPFLHEFEKACGVDDAQVLRHIYGGLQFKNIPPTLSHAQQLEHHRHHTSTMTGMMESQRWRH 241          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: T0QNM0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNM0_SAPDV)

HSP 1 Score: 178 bits (451), Expect = 1.380e-45
Identity = 101/276 (36.59%), Postives = 140/276 (50.72%), Query Frame = 2
Query:  773 LAPLRCHVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERL 1600
            + PL  HVVDDH   L+ IH AIR+R LPF   +++H DAH DL  PP++ A   F P  LYD L  SE GIA ++LP+ + GH+ +L WI+PPWA Q   G + F VG+ + TG L V+S   YF+D+ LY P +++   KP  L ++ A          PA  V                                          P+VLDICLDYF+  NPF  ++   +G+D A L+   Y    ++  T  LPH  ++EH RLF S ++ L
Sbjct:    1 MEPLGVHVVDDHHHVLEPIHRAIRQRRLPFANFTIVHLDAHADLAFPPSLPAATIFSPDALYDGLDASEAGIASFLLPLAYAGHMHRLVWIKPPWATQMAIGTHAFDVGQHKATGCLGVTSHESYFIDENLYAPRDALD--KPASLELTVAE--------LPAAPVP---------------------------------------EGPYVLDICLDYFSTLNPFRQDITRAMGEDTASLLSCIYGDLSYKKKTVELPHSTRLEHGRLFASTIKTL 227          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A485KQ73_9STRA (Aste57867_10189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ73_9STRA)

HSP 1 Score: 170 bits (431), Expect = 6.790e-43
Identity = 100/270 (37.04%), Postives = 139/270 (51.48%), Query Frame = 2
Query:  794 VVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERLL 1603
            VVDDH   L+ IH AIR+R LPF   +M+H+DAHPDL  P ++ A   F P   YD L  SE GIA ++LP+V+ GH+  L W++PPWA Q + G   F+VG+ + TG LRVSS   YFVD+ +Y     +   + +HL V     E  SGS  PA                          P D                P+VLDICLDYF   NPF    ++  G +D  L+R  Y +  F+ A++ L H  + EH+ L  + ++R++
Sbjct:    8 VVDDHHHVLEPIHKAIRKRILPFSNWNMVHFDAHPDLAFPRSIPADRIFAPFAFYDDLDESEAGIASFLLPLVYAGHMKNLVWVKPPWATQMLLGHEEFTVGRHDATGELRVSSQHTYFVDEVMYANPTELSKAQTLHLSVC----ELGSGSMPPA--------------------------PAD----------------PYVLDICLDYFATINPFQKAFDAACGVEDGQLLRFIYGNLAFKTASSTLSHVEKREHQALHAAFLDRII 231          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A1V9ZZD1_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZD1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.250e-43
Identity = 96/277 (34.66%), Postives = 142/277 (51.26%), Query Frame = 2
Query:  773 LAPLRCHVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERLL 1603
            +A L  HVVDDH   L+ IH AIRRR LPF   +++H+DAH DL  P  + A   F P+ LYD L  S+ GIA ++LP+V+ GH++KL W++PPWA+Q   G   F VGK   +  LR++S   YFV++ LY P   +   K ++                           + ++   E    + +                 KG + ++LDICLDYF+  NPF  EL+  +G+    L+R  Y    ++ +   LPHDVQ+EH + F S +  +L
Sbjct:    1 MAQLEVHVVDDHHHVLEPIHKAIRRRVLPFNEFAIIHFDAHADLAFPNTLPADVIFRPENLYDELDASDAGIASFLLPLVYAGHMTKLIWVKPPWAKQMALGTQDFVVGKHLTSECLRLTSKETYFVEEGLYAPLNELTKTKSMN-------------------------NSLVQLTVAELPMQVNL-----------------KGQA-YILDICLDYFSTLNPFFEELKPALGEQKTLLIRRIYCGLCYKKSELLLPHDVQLEHYKKFSSTINTIL 234          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A2R5G5M2_9STRA (UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5M2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.040e-41
Identity = 152/503 (30.22%), Postives = 226/503 (44.93%), Query Frame = 2
Query:  743 ERRKRARSAPLAPLRCHVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKV----------EDT-----GMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERLLNPSARMHPLPPETNTDV---KRSSTVGCPNSSFHQCGEMTENTLAGKTALVTEKSTHDSTAVGFQREMQEEEGRGGDRARELQRLEKLFSTDGDDRSLPGKFASMIGRIGAEERKLVAWVDHCACLPRYLSTREEVSASVRRAEAILVSEMGMAESRGWSGRPGVVTVARSVGD--GYVPVDMVGFVEGEVLAMLKRLFGD 2191
            E  K+ ++ P+     +V  DH +AL+ +HAAIR   + F G++M+H D+HPDLMVPP M A   F P+EL+  L+ SE GIAE+ILP V+ GHL +L W+RP WA Q  DG + F VGK           ED      G LRV+   PY+ D+ L CP E ++  K V + V+ A                           C  +  +++                  G  PWVLDICLDYF+  NPF ++L++++G   A L +  Y      G T A     +    R+ +SE     + +A+ H  P +T  D    K    +    S+      + EN  AG   + TE ++  S A+    E       G D A +    E + +           F  ++    AE R L+A       LP + S+  E+ +       +L+S    A+       P +VT+A+S  D   Y PVD V  +    LAML+ ++ D
Sbjct:   34 EAEKKIKTLPV-----YVSGDHNEALESLHAAIRVGEVAFSGLAMLHVDSHPDLMVPPRMPADLVFKPRELHWELAKSETGIAEFILPAVYAGHLERLVWLRPTWADQLPDGQWEFKVGKAPGCSADEIITEDDERVNGGPLRVTWRTPYYEDEGLTCPVEDLQGAKSVEILVAGAA-------------------------TCTPQAFVQVC-----------------GDRPWVLDICLDYFSVNNPFYVDLQTKLGVKAATLCQEVYA-----GETLAWRRLERARQLRVPESEA----SVAAQEHD-PLKTRYDAAKRKHDDAIAALLSA------VVEN--AGPD-MPTEATSQASAALCACFEP------GADVAHDKGPSEVVEA-----------FVDLVRGASAETRALIASCGPNLDLPHHRSSESELDSLFAHLRELLLSVSASAQE------PSIVTIAKSSSDLLDYTPVDQVQGLFDRTLAMLRTVYPD 447          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A1V9Z4E5_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4E5_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.840e-41
Identity = 99/265 (37.36%), Postives = 134/265 (50.57%), Query Frame = 2
Query:  791 HVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKS 1585
            +VVDDH       H AIRRR LPF  V+++H DAHPDL  P ++ A   F P+ LYDAL  S+ GIA ++LP+ + GHL  L W++PPWA Q   GD+ F VG    T    VSS   YFVD+ L+   E++ + KP+ L V+                         E+ A  T T                        S +VLDICLDYF+  NPF+ +L +  G   A LVR+ Y   +++    A+PH+V + H RLF S
Sbjct:   11 YVVDDH-------HHAIRRRLLPFSNVTIVHLDAHPDLAFPRSIPAATIFAPEALYDALDASDAGIASFLLPLAYAGHLRHLVWVKPPWATQMATGDHEFLVG----TDACAVSSHEAYFVDEDLFARAETLSEAKPLSLTVA-------------------------ELPAAPTPTA-----------------------SSFVLDICLDYFSTHNPFLQDLVAAKGPTTAALVRSVYCGLLYKCVPAAVPHEVALAHRRLFAS 216          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A067CX65_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CX65_SAPPC)

HSP 1 Score: 164 bits (416), Expect = 7.800e-41
Identity = 100/281 (35.59%), Postives = 139/281 (49.47%), Query Frame = 2
Query:  773 LAPLRCHVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFI-----LELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERL 1600
            + PL  HVVDDH   L+ IH AIR+R LPF   +++H DAH DL  PP++ A   F P  LYD L  S+ GIA ++LP+ + GH+ +L WI+PPWA Q   G + F VG+ +DTG L V+S A YFVD+ LY P ++++  KP  L ++ A                       E+ A           P                  P+VLDICLDYF     F      +++   +G D A L+   Y    F+     LPH  ++EH RLF + +  L
Sbjct:    1 MQPLEVHVVDDHHHVLEPIHRAIRQRRLPFANCTIVHVDAHADLAFPPSLPAATIFSPGALYDGLDASDAGIASFLLPLAYAGHIHRLVWIKPPWATQMAIGTHTFHVGQQKDTGCLGVTSHASYFVDENLYAPLDALE--KPASLELTVA-----------------------ELPAA----------PLPE--------------GPYVLDICLDYFQRSTRFAKVYAAVDITRDLGDDTALLLSGIYGDLAFKKKKAELPHSTRLEHARLFATTMTTL 232          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A813HJC0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HJC0_POLGL)

HSP 1 Score: 165 bits (417), Expect = 7.830e-40
Identity = 137/515 (26.60%), Postives = 208/515 (40.39%), Query Frame = 2
Query:  794 VVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFC-PQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTG----------------------------------------------MLRVSSTAPYFVDDCLYCPEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRTTIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRIGKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERLLNPSARMHPLPPETNTDVKRSSTVGCPNSSFHQCGEMTENTLAGKTALVTEKSTHDSTAVGFQREMQEEEGRGGDRARELQRLEKLFSTDGDDRSLPGKFASMIGRIGAEERKLVAWVDHCACLPRYLSTREEVSASVRRAEAILVSEMGMAESR---GWSGRPGVVTVARSVGDGYVPVDMVGFVEGEVLAMLKRLFG 2188
            V + H +AL+ +H AIRRR LPF+G++M+H DAHPD+     + A   F  P  +Y AL +   GIA WILP V+ GHL+ +WW+RP WARQ  DGDYR  VG+   T                                                +R+S + PYFV+D ++ P+  +KD KP+   VS                         ++   + R  +     ++      A S      SPWVLD+CLDYF C NPF+ ++   I    AD+  A      FR  +        VE    F SE +      A +          ++++           Q  E  + T+  +   V               ++ EEE   G     +  L K       + +L    +S++  +   E   +        LP +  +  E+   +   E  L        S+   G  GRP +VT+ARSV DG+ P+  + F+E  V+ +L+R FG
Sbjct:   35 VCEYHDEALRCLHVAIRRRKLPFDGLTMVHLDAHPDMSASTTLPAEVVFQEPWHVYSALRSDPSGIASWILPAVYGGHLNCVWWVRPEWARQIADGDYRVQVGRAVTTSEGGSSSSSAPAASKDLPKKGLARFTPRPPTSGVTTANLQQEAGPLETIRISCSQPYFVEDGIFAPDSELKDAKPLQFLVS-------------------------QMPGADERIAL-----WEEEEDRKAGSLPKTSGSPWVLDVCLDYFACGNPFLTQVRPHIAAAFADVQDA----ATFRAGS--------VEDAARFISERDAFDAAFAEV----------LRQAIEAPAAEEDDAQGSEQGDGTIPEEDEAV---------------DLDEEEEEEGPLEEAVAALGKYLPGSRRE-ALLAALSSVLREVRESELHQLRDAGSMVTLPLHPPSESELRERLGAFEDFLTRLCAQHASKAGNGADGRPAIVTIARSVVDGFCPMRWLLFLEQGVMEVLRRRFG 481          
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Match: A0A835Z3T2_9STRA (UPF0489 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 7.120e-37
Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 2
Query:  758 ARSAPLAPLRCHVVDDHCDALKHIHAAIRRRALPFEGVSMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQGHLSKLWWIRPPWARQFMDGDYRFSVGKVEDTG 1117
            A +AP  P  CHVV+DH DAL   H A+RR+ L  +G++M+H DAHPDL V  +M A  CF P+ LYDAL  S GGIAEWI+P+V++GHL  +WW+RPPWA QF DG Y   VGK + TG
Sbjct:   10 AAAAPTIP--CHVVEDHHDALPFWHLAMRRKRLAQQGITMVHIDAHPDLCVTEDMQADICFQPRALYDALDNSVGGIAEWIIPLVYEGHLDTIWWLRPPWADQFTDGTYALGVGKSQATG 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16500.4099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI72_ECTSI1.550e-14250.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024UGZ0_9STRA7.760e-4736.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T0QNM0_SAPDV1.380e-4536.59Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A485KQ73_9STRA6.790e-4337.04Aste57867_10189 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZZD1_9STRA9.250e-4334.66UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca... [more]
A0A2R5G5M2_9STRA1.040e-4130.22UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalg... [more]
A0A1V9Z4E5_9STRA1.840e-4137.36UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogy... [more]
A0A067CX65_SAPPC7.800e-4135.59Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A813HJC0_POLGL7.830e-4026.60Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A835Z3T2_9STRA7.120e-3756.67UPF0489 domain-containing protein n=1 Tax=Tribonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16500contigH-elongata_contig16500:1368..4565 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.0
Seed ortholog evalue6.1e-123
Seed eggNOG ortholog2880.D8LI72
Preferred nameC5orf22
GOsGO:0008150,GO:0009966,GO:0009968,GO:0010646,GO:0010648,GO:0023051,GO:0023057,GO:0046578,GO:0046580,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0051056,GO:0051058,GO:0065007,GO:1902531,GO:1902532
EggNOG free text desc.UPF0489 domain
EggNOG OGs28PEW@1,2QW2U@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUncharacterised protein family UPF0489
Ec32 orthologEc-14_003400.1
Exons4
Model size2692
Cds size1539
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16500.4099.1prot_H-elongata_contig16500.4099.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16500 2255..4133 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929966.280991-UTR-H-elongata_contig16500:1367..16111622929966.280991-UTR-H-elongata_contig16500:1367..1611Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16500 1368..1611 +
1691679227.23025-UTR-H-elongata_contig16500:1367..16111691679227.23025-UTR-H-elongata_contig16500:1367..1611Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16500 1368..1611 +
1622929966.2969418-UTR-H-elongata_contig16500:1777..22541622929966.2969418-UTR-H-elongata_contig16500:1777..2254Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16500 1778..2254 +
1691679227.2420442-UTR-H-elongata_contig16500:1777..22541691679227.2420442-UTR-H-elongata_contig16500:1777..2254Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16500 1778..2254 +
1622929966.360272-UTR-H-elongata_contig16500:4133..45651622929966.360272-UTR-H-elongata_contig16500:4133..4565Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16500 4134..4565 +
1691679227.2883112-UTR-H-elongata_contig16500:4133..45651691679227.2883112-UTR-H-elongata_contig16500:4133..4565Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16500 4134..4565 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929966.3126597-CDS-H-elongata_contig16500:2254..26191622929966.3126597-CDS-H-elongata_contig16500:2254..2619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16500 2255..2619 +
1691679227.2515464-CDS-H-elongata_contig16500:2254..26191691679227.2515464-CDS-H-elongata_contig16500:2254..2619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16500 2255..2619 +
1622929966.3275774-CDS-H-elongata_contig16500:2802..31361622929966.3275774-CDS-H-elongata_contig16500:2802..3136Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16500 2803..3136 +
1691679227.2678812-CDS-H-elongata_contig16500:2802..31361691679227.2678812-CDS-H-elongata_contig16500:2802..3136Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16500 2803..3136 +
1622929966.3432584-CDS-H-elongata_contig16500:3293..41331622929966.3432584-CDS-H-elongata_contig16500:3293..4133Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16500 3294..4133 +
1691679227.2769992-CDS-H-elongata_contig16500:3293..41331691679227.2769992-CDS-H-elongata_contig16500:3293..4133Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16500 3294..4133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16500.4099.1

>prot_H-elongata_contig16500.4099.1 ID=prot_H-elongata_contig16500.4099.1|Name=mRNA_H-elongata_contig16500.4099.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=513bp
MEKLVVAERRKRARSAPLAPLRCHVVDDHCDALKHIHAAIRRRALPFEGV
SMMHWDAHPDLMVPPNMAATACFCPQELYDALSTSEGGIAEWILPMVFQG
HLSKLWWIRPPWARQFMDGDYRFSVGKVEDTGMLRVSSTAPYFVDDCLYC
PEESMKDCKPVHLFVSTAREEGTSGSSAPAITVKADTKKVCEVEACETRT
TIKMVRPFDSRNHVGAESANGKGPSPWVLDICLDYFTCENPFILELESRI
GKDDADLVRAFYQSPMFRGATTALPHDVQVEHERLFKSEVERLLNPSARM
HPLPPETNTDVKRSSTVGCPNSSFHQCGEMTENTLAGKTALVTEKSTHDS
TAVGFQREMQEEEGRGGDRARELQRLEKLFSTDGDDRSLPGKFASMIGRI
GAEERKLVAWVDHCACLPRYLSTREEVSASVRRAEAILVSEMGMAESRGW
SGRPGVVTVARSVGDGYVPVDMVGFVEGEVLAMLKRLFGDGADPAIGVGG
MEVIYEDGMEHE*
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mRNA from alignment at H-elongata_contig16500:1368..4565+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16500.4099.1 ID=mRNA_H-elongata_contig16500.4099.1|Name=mRNA_H-elongata_contig16500.4099.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3198bp|location=Sequence derived from alignment at H-elongata_contig16500:1368..4565+ (Himanthalia elongata Himel1 dioecious)
TCTCAAGGTAAAGGCAGAATATTGGAGCCTGTGCGATATAAAAGGGAATT TTTCTCCGGAGCGTCTTCGCGGGTGTGGCGTGCGCGTTGCTGCAAGCTGA TCGAAATGATGCAGTAGAGCCTCAATTTCCCTACAGGTGTTTTGCGCCGC ATTACACGATACCGCAATCCTAAACAGCGCTCGCGAGCGCCACATGTCCC CCAGGCATCCATAACAGTGACACATTGATTTCTTTATATTTTCCCGTTGT ACCTGAACTCGAACGAGCCCCAAACATGTCGTACAGGAGACACGGTTTGC ATTTATCGGTATATGCTGGCGCATGTGGAAATTCGACCACTCAGTACCCC CGAAGGGCTCCTCTTCGACGCGCCTAAACAGGGCAATCTTCTCCTGAAAA CGCTTGCGCTCGTTGGAGACAGATATATTACGTCCAGATGAAGTCATTTA GCGTCTAATATTTCACGGTGTACAACGCTCCGGACGCGTTTTTTGTGATG CCGAATATACAACATACCCGTTATTTCCACTATTAACATACTAGTATAAC CTCTGTCGCAGAGCACTGTTGCCGCACTCTTTGCTGGCCAATTACATTAC AGCAAAGGTTTCGAGCTTTATGAATTCGCGTATTTACAAGATGCTTTCGT CTGAGTTTGTCGAATAGAAACAAACAAAACGAAGGGTAACCCGCAAGAAA CACGCCTGGAGGCCAGCAAACCTCCTACGTAGTTTGCTACAGCCTTAAAA TATTTACACAATTTATGCACAACGCGCTGCGAGCTGCCGATTGATGATGT CTAGGGATGCCTACGACCTGCGGCGTGCCTCTTCCACCTTCCATCTCATA GGAACCAAAGTCAAAGGGACACCCGTCGATTCCCGCGATGGAGAAGCTGG TCGTTGCGGAGCGGCGCAAGCGCGCTAGATCAGCTCCTTTGGCACCTCTC CGCTGCCACGTGGTTGACGATCACTGTGACGCGCTCAAGCACATCCATGC TGCCATACGGCGCCGGGCACTTCCGTTCGAGGGTGTGTCCATGATGCACT GGGATGCCCACCCAGACCTGATGGTGCCGCCTAATATGGCTGCCACAGCG TGCTTTTGCCCGCAAGAGCTTTACGACGCACTGAGTACGTCCGAGGGTGG AATAGCCGAGTGGATACTGCCGATGGTTTTTCAGGGGCACCTTTCCAAGC TCTGGTGGATACGACCGCCGTGGGCACGACAATTCATGGATGGAGATTAT CGGTGAGAAATCGATTCTACGCAGTCAACACCCAACCGATTGTCTTTCTT GCTGCGCGGCCGAATCATATCAAAGAAGCCCACAGATGGCAAAACACGGG ATGGGAACCGAAGCGTCCAACTGTAAGGGACTAATAAATGAGCACTATCT GCGTGTTGCGTGTCTTTGCGTCTCCCGAACGGAAGATTTTCCGTCGGCAA GGTCGAGGACACAGGGATGCTCCGGGTCAGCAGCACCGCGCCGTATTTCG TGGACGATTGTTTATATTGTCCCGAGGAATCCATGAAAGACTGTAAGCCC GTCCATCTGTTCGTTAGCACCGCCCGTGAAGAAGGCACGTCAGGATCAAG CGCTCCAGCGATCACGGTTAAGGCAGACACCAAAAAGGTGTGTGAGGTGG AGGCGTGTGAGACACGAACTACAATAAAGATGGTCAGGCCTTTCGACTCT CGAAACCATGTCGGCGCGGAGTCAGCCAACGGGAAAGGGCCGAGCCCCTG GGTGCTCGACATATGTTTGGTGAGTAACAAGGCCAATTGCGCGCCAGTGG TGAATGTGACGCTCGGCTCCATTATCACTCCAATATCGAGAACGATATAG CAGTGCTCTACCGTTCAGGACACTGCGTTTAATTCCTCCATTCTGCCCGG AATACTTGTCGTTTCCCGGTCGGCAGGACTACTTCACTTGCGAAAATCCT TTCATCCTGGAGCTCGAATCACGCATCGGCAAGGATGACGCCGACCTCGT CCGGGCTTTCTACCAGAGCCCCATGTTTCGCGGTGCCACCACCGCACTCC CGCACGACGTGCAGGTTGAGCACGAGCGCTTGTTCAAGTCAGAGGTTGAA CGTCTCCTGAATCCGAGCGCTAGAATGCACCCTTTACCACCGGAGACGAA TACAGATGTGAAGCGTTCTAGTACCGTAGGATGCCCTAATTCGTCGTTCC ACCAGTGCGGGGAGATGACTGAAAACACGCTTGCGGGAAAAACCGCGCTT GTCACAGAAAAGAGCACCCACGACTCAACAGCGGTGGGATTTCAGCGGGA AATGCAGGAGGAAGAGGGGCGGGGCGGTGATCGAGCGCGTGAGCTACAGC GCTTGGAGAAGCTGTTTTCAACAGACGGAGATGATCGATCATTGCCTGGA AAGTTCGCGTCTATGATTGGTCGGATAGGGGCAGAGGAGAGAAAACTTGT GGCGTGGGTAGATCACTGCGCCTGCCTACCTCGGTATTTGTCTACTCGCG AAGAAGTGAGCGCTTCCGTGCGCAGGGCGGAGGCGATTCTAGTCTCGGAA ATGGGCATGGCTGAGAGCAGAGGTTGGAGCGGACGTCCCGGCGTGGTAAC GGTTGCTCGTTCTGTGGGGGACGGTTACGTGCCGGTGGATATGGTTGGGT TCGTGGAGGGAGAGGTGCTAGCTATGCTCAAGCGTCTTTTTGGTGATGGA GCCGACCCTGCGATTGGGGTCGGCGGGATGGAGGTTATTTATGAGGATGG AATGGAGCATGAGTAAGGATGAGCGGTTGAATATCGCCCTTTTGACCCGC CTCATTTATGCGTGTTTTCGTGACGCCTAGGTCGACAGTGGTATTTCGGT AGCCTCTCTACGTTGCTTCTTGGGGTCCTGTAATCATTACCGTTTCGTCA AATGCGTTCTACTTGCTCGTATCGTGAAGCTATATATACAACCGCTTTTC CGCTTTCTTTTTCTCAGAACCTCAAAGCCTGGTCTACCCAAACGAAAATA TAAGCATATCACCTTAGTTTTATTACTAGTAATAGATGGTCCAGTATCTG GCGGAGAACGTCGAAGCAGAAATTCACTCCAAATGCTTGTGAGCGCAAGT GTGCCGTTATCGCGAACGTACGTAGAACGCAGTAGTGCCACGGTAGAAGC ATCTAAAACTTGTGAGGAGAAATACGATGTATTTTGTCCCCCGCTGCC
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Coding sequence (CDS) from alignment at H-elongata_contig16500:1368..4565+

>mRNA_H-elongata_contig16500.4099.1 ID=mRNA_H-elongata_contig16500.4099.1|Name=mRNA_H-elongata_contig16500.4099.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3078bp|location=Sequence derived from alignment at H-elongata_contig16500:1368..4565+ (Himanthalia elongata Himel1 dioecious)
ATGGAGAAGCTGGTCGTTGCGGAGCGGCGCAAGCGCGCTAGATCAGCTCC
TTTGGCACCTCTCCGCTGCCACGTGGTTGACGATCACTGTGACGCGCTCA
AGCACATCCATGCTGCCATACGGCGCCGGGCACTTCCGTTCGAGGGTGTG
TCCATGATGCACTGGGATGCCCACCCAGACCTGATGGTGCCGCCTAATAT
GGCTGCCACAGCGTGCTTTTGCCCGCAAGAGCTTTACGACGCACTGAGTA
CGTCCGAGGGTGGAATAGCCGAGTGGATACTGCCGATGGTTTTTCAGGGG
CACCTTTCCAAGCTCTGGTGGATACGACCGCCGTGGGCACGACAATTCAT
GGATGGAGATTATCGATGGAGAAGCTGGTCGTTGCGGAGCGGCGCAAGCG
CGCTAGATCAGCTCCTTTGGCACCTCTCCGCTGCCACGTGGTTGACGATC
ACTGTGACGCGCTCAAGCACATCCATGCTGCCATACGGCGCCGGGCACTT
CCGTTCGAGGGTGTGTCCATGATGCACTGGGATGCCCACCCAGACCTGAT
GGTGCCGCCTAATATGGCTGCCACAGCGTGCTTTTGCCCGCAAGAGCTTT
ACGACGCACTGAGTACGTCCGAGGGTGGAATAGCCGAGTGGATACTGCCG
ATGGTTTTTCAGGGGCACCTTTCCAAGCTCTGGTGGATACGACCGCCGTG
GGCACGACAATTCATGGATGGAGATTATCGATTTTCCGTCGGCAAGGTCG
AGGACACAGGGATGCTCCGGGTCAGCAGCACCGCGCCGTATTTCGTGGAC
GATTGTTTATATTGTCCCGAGGAATCCATGAAAGACTGTAAGCCCGTCCA
TCTGTTCGTTAGCACCGCCCGTGAAGAAGGCACGTCAGGATCAAGCGCTC
CAGCGATCACGGTTAAGGCAGACACCAAAAAGGTGTGTGAGGTGGAGGCG
TGTGAGACACGAACTACAATAAAGATGGTCAGGCCTTTCGACTCTCGAAA
CCATGTCGGCGCGGAGTCAGCCAACGGGAAAGGGCCGAGCCCCTGGGTGC
TCGACATATGTTTGATTTTCCGTCGGCAAGGTCGAGGACACAGGGATGCT
CCGGGTCAGCAGCACCGCGCCGTATTTCGTGGACGATTGTTTATATTGTC
CCGAGGAATCCATGAAAGACTGTAAGCCCGTCCATCTGTTCGTTAGCACC
GCCCGTGAAGAAGGCACGTCAGGATCAAGCGCTCCAGCGATCACGGTTAA
GGCAGACACCAAAAAGGTGTGTGAGGTGGAGGCGTGTGAGACACGAACTA
CAATAAAGATGGTCAGGCCTTTCGACTCTCGAAACCATGTCGGCGCGGAG
TCAGCCAACGGGAAAGGGCCGAGCCCCTGGGTGCTCGACATATGTTTGGA
CTACTTCACTTGCGAAAATCCTTTCATCCTGGAGCTCGAATCACGCATCG
GCAAGGATGACGCCGACCTCGTCCGGGCTTTCTACCAGAGCCCCATGTTT
CGCGGTGCCACCACCGCACTCCCGCACGACGTGCAGGTTGAGCACGAGCG
CTTGTTCAAGTCAGAGGTTGAACGTCTCCTGAATCCGAGCGCTAGAATGC
ACCCTTTACCACCGGAGACGAATACAGATGTGAAGCGTTCTAGTACCGTA
GGATGCCCTAATTCGTCGTTCCACCAGTGCGGGGAGATGACTGAAAACAC
GCTTGCGGGAAAAACCGCGCTTGTCACAGAAAAGAGCACCCACGACTCAA
CAGCGGTGGGATTTCAGCGGGAAATGCAGGAGGAAGAGGGGCGGGGCGGT
GATCGAGCGCGTGAGCTACAGCGCTTGGAGAAGCTGTTTTCAACAGACGG
AGATGATCGATCATTGCCTGGAAAGTTCGCGTCTATGATTGGTCGGATAG
GGGCAGAGGAGAGAAAACTTGTGGCGTGGGTAGATCACTGCGCCTGCCTA
CCTCGGTATTTGTCTACTCGCGAAGAAGTGAGCGCTTCCGTGCGCAGGGC
GGAGGCGATTCTAGTCTCGGAAATGGGCATGGCTGAGAGCAGAGGTTGGA
GCGGACGTCCCGGCGTGGTAACGGTTGCTCGTTCTGTGGGGGACGGTTAC
GTGCCGGTGGATATGGTTGGGTTCGTGGAGGGAGAGGTGCTAGCTATGCT
CAAGCGTCTTTTTGGTGATGGAGCCGACCCTGCGATTGGGGTCGGCGGGA
TGGAGGTTATTTATGAGGATGGAATGGAGCATGAGTAAGACTACTTCACT
TGCGAAAATCCTTTCATCCTGGAGCTCGAATCACGCATCGGCAAGGATGA
CGCCGACCTCGTCCGGGCTTTCTACCAGAGCCCCATGTTTCGCGGTGCCA
CCACCGCACTCCCGCACGACGTGCAGGTTGAGCACGAGCGCTTGTTCAAG
TCAGAGGTTGAACGTCTCCTGAATCCGAGCGCTAGAATGCACCCTTTACC
ACCGGAGACGAATACAGATGTGAAGCGTTCTAGTACCGTAGGATGCCCTA
ATTCGTCGTTCCACCAGTGCGGGGAGATGACTGAAAACACGCTTGCGGGA
AAAACCGCGCTTGTCACAGAAAAGAGCACCCACGACTCAACAGCGGTGGG
ATTTCAGCGGGAAATGCAGGAGGAAGAGGGGCGGGGCGGTGATCGAGCGC
GTGAGCTACAGCGCTTGGAGAAGCTGTTTTCAACAGACGGAGATGATCGA
TCATTGCCTGGAAAGTTCGCGTCTATGATTGGTCGGATAGGGGCAGAGGA
GAGAAAACTTGTGGCGTGGGTAGATCACTGCGCCTGCCTACCTCGGTATT
TGTCTACTCGCGAAGAAGTGAGCGCTTCCGTGCGCAGGGCGGAGGCGATT
CTAGTCTCGGAAATGGGCATGGCTGAGAGCAGAGGTTGGAGCGGACGTCC
CGGCGTGGTAACGGTTGCTCGTTCTGTGGGGGACGGTTACGTGCCGGTGG
ATATGGTTGGGTTCGTGGAGGGAGAGGTGCTAGCTATGCTCAAGCGTCTT
TTTGGTGATGGAGCCGACCCTGCGATTGGGGTCGGCGGGATGGAGGTTAT
TTATGAGGATGGAATGGAGCATGAGTAA
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