mRNA_H-elongata_contig1650.4097.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1650.4097.1
Unique NamemRNA_H-elongata_contig1650.4097.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: D7FJ06_ECTSI (Epimerase/dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ06_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 1.080e-120
Identity = 180/228 (78.95%), Postives = 203/228 (89.04%), Query Frame = 1
Query:    1 LRMVCKRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDPSKDSRYESLAQPEPF 684
            LRM   +VFVAGGAKGVGR +IDKLV+QGS+VVALVRR+DAK+EL+AI GV AVVCDALDLKGVE VLDGCDAA+TTLGGAP GDE KRVDY GNRN+IESAGILGITR+V+V+SVGCGSSR+AISD VYQVLEKALKAKT+AEN+LLKYYTNS+WTIIRPG LK++ ATGTAILTED K AGVINR DVA+L VQALNSP TVRKILTA+DP+  S Y+S  +P  F
Sbjct:   44 LRMAYGKVFVAGGAKGVGRAVIDKLVDQGSEVVALVRREDAKDELEAIKGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDESKRVDYAGNRNVIESAGILGITRVVMVTSVGCGSSREAISDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTEDTKAAGVINRADVADLAVQALNSPSTVRKILTAVDPAVQSSYDSAEKPAAF 271          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A835Z825_9STRA (Epimerase/dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z825_9STRA)

HSP 1 Score: 269 bits (688), Expect = 7.130e-88
Identity = 142/228 (62.28%), Postives = 176/228 (77.19%), Query Frame = 1
Query:    1 LRMVCKRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDPSKDSRYESLAQPEPF 684
            L M   +VFVAGG+ GVGR ++++LV +G  VVA+VRR+DA EEL+AI GV AV+ DALDLKGVEG LDGCDAA+TTLGG+ G   E RVDY GNRN+IESAGILG+TR++LV+SVGCG SR AISD VY  LEKAL AKT AE +L KYYTN+ WTIIRPG L+  E TG AILTE+   AG+I R DVA++VV+AL++  T +K+ TA+DPS  S +   ++ E F
Sbjct:   36 LSMAYNKVFVAGGSSGVGREVVNQLVSKGKQVVAIVRREDALEELNAIEGVTAVMVDALDLKGVEGALDGCDAAITTLGGSSG---ENRVDYEGNRNVIESAGILGVTRVILVTSVGCGDSRGAISDQVYTSLEKALVAKTKAEKMLQKYYTNAFWTIIRPGGLQTAEGTGKAILTENKTIAGIIRRADVADVVVRALDNDGTHKKVFTAVDPSIPSSFGDASKAEAF 260          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A7S3L6R6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6R6_9STRA)

HSP 1 Score: 267 bits (682), Expect = 5.990e-87
Identity = 137/223 (61.43%), Postives = 176/223 (78.92%), Query Frame = 1
Query:   16 KRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDPSKDSRYESLAQPEPF 684
            K VFVAGG+KGVGR++IDKL+EQGS VVALVR+++   +L++I GV A+V DA D K VE  +DGCDAA+TTLGG+   D   R+DY GN N+IESAGILG+ R++LV+SVGCGSS++A  + V++ L++ L AK  AEN+L+KYYTNS+W+IIRPG LK+  ATG AILTED KT G I+REDVA+LVV+ L SP+T RKILTAIDPS +S   + A+ E F
Sbjct:   40 KNVFVAGGSKGVGRLVIDKLLEQGSKVVALVRKEEVAADLNSIEGVTAIVGDAFDQKTVENAMDGCDAAITTLGGSTQ-DTGARIDYAGNSNVIESAGILGVQRIILVTSVGCGSSKEAAPEAVFEALKEVLLAKEKAENVLIKYYTNSNWSIIRPGGLKSEPATGNAILTEDNKTIGTIHREDVASLVVRCLESPKTERKILTAIDPSIESAVATGAEVEAF 261          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: B7FVE3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVE3_PHATC)

HSP 1 Score: 263 bits (671), Expect = 3.190e-85
Identity = 136/223 (60.99%), Postives = 170/223 (76.23%), Query Frame = 1
Query:   16 KRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDPSKDSRYESLAQPEPF 684
            K+VFVAGG +GVGR ++D+L+ QGS+VVALVR +DA +EL+AI GV A+  DA + K VE  +DGCDAA+TTLGGA   D  KRVDY GN N+IESAGILG+TR++LV+SVGCGSS++A    V++ L++ L AK  AEN+L+KYYTN +WTIIRPG LK+  ATG AILTED +  G I+REDVA L ++ALNS  T RK+LTAIDPS DS      Q E F
Sbjct:   44 KKVFVAGGTRGVGRCIVDQLLGQGSEVVALVRSEDALKELNAIEGVTAIRGDAFEQKAVENAMDGCDAAITTLGGATS-DGGKRVDYDGNSNVIESAGILGVTRVILVTSVGCGSSKEAAPPNVFEALKEVLTAKEKAENVLIKYYTNMNWTIIRPGGLKSEPATGKAILTEDTRAIGTIHREDVAALAIKALNSSNTERKVLTAIDPSIDSAVSDGKQVEAF 265          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A7S2V5P0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P0_9STRA)

HSP 1 Score: 257 bits (656), Expect = 7.300e-83
Identity = 129/213 (60.56%), Postives = 165/213 (77.46%), Query Frame = 1
Query:    1 LRMVCKRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDP 639
            L M  K+VFVAG AKGVGR ++++LV +  +VVA VRR++AK+EL  + GV A++ DAL  K VEG +DGCDAAVTTLG AP  ++  +VDY GN N+IE+AGILG+TR +LV+SVGCG S++A+S   Y+ LE ALKAK  AE +L KYYTNSDWT+IRPG L N EAT  A+LTE+    GVINR DVA+LVV+AL+S +T RK+LTA+DP
Sbjct:   61 LEMAYKKVFVAGAAKGVGRQIVEQLVAKDVEVVAFVRREEAKQELGGLKGVTAILGDALVQKDVEGAMDGCDAAVTTLGSAPTDEQRWKVDYDGNVNVIEAAGILGVTRCILVTSVGCGDSKEAVSPDAYEKLENALKAKEKAERVLTKYYTNSDWTVIRPGGLMNGEATSAAVLTENKMACGVINRADVASLVVKALDSQKTFRKVLTAVDP 273          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A6U3NUE1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NUE1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.990e-81
Identity = 124/209 (59.33%), Postives = 164/209 (78.47%), Query Frame = 1
Query:   16 KRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDPS 642
            K+VFVAGG+KGVGR ++DKL+E GS+VVALVR ++A +EL A+ GV A++ DA + K VEG +DGCDAA+TTLG    G++ KRVDY GN N+IE+AGILG+TR++L++S+GCGSS++A    V++VL+  L AK  AEN+L+KYYTN +WTIIRPG LK+   TG AILTED    G I+REDVA L V+AL S +T RK+L+A+D S
Sbjct:   52 KKVFVAGGSKGVGRHIVDKLIEDGSEVVALVRSQEAIDELSALEGVTAILGDAFEYKNVEGAMDGCDAAITTLGQGTAGEDGKRVDYEGNSNVIEAAGILGVTRVILITSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIIRPGGLKSEPGTGEAILTEDAMAIGSIHREDVAALAVKALTSSKTERKVLSAVDQS 260          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A7S2HK64_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HK64_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.190e-81
Identity = 123/209 (58.85%), Postives = 167/209 (79.90%), Query Frame = 1
Query:   16 KRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDPS 642
            K+VFVAGG+KGVGR+++DKL+E GS+VVALVR ++A +EL AI+GV  ++ DA + K VE  +DGCDAA+TTLG     ++ KRVDY GN N+IE+AGILG+TR++LV+S+GCGSS++A    V++VL+  L AK  AEN+L+KYYTN++WTI+RPG LK+  ATG AILTED    G I+REDVA+L+V+AL S +T RK+L+A+D S
Sbjct:   55 KKVFVAGGSKGVGRLIVDKLIEDGSEVVALVRSQEAVDELGAIDGVTPILGDAFEYKNVENAMDGCDAAITTLGQGSATEDGKRVDYEGNSNVIEAAGILGVTRVILVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNTNWTIVRPGGLKSEPATGEAILTEDAMAIGSIHREDVASLIVKALTSSKTERKVLSAVDQS 263          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A7S2UDM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDM5_9STRA)

HSP 1 Score: 253 bits (646), Expect = 3.000e-81
Identity = 126/207 (60.87%), Postives = 166/207 (80.19%), Query Frame = 1
Query:   19 RVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDP 639
            +VFVAGG+KGVGR+++DKLV  G+ VVALVR ++A  EL+A++GV AV+ DA D K VEG +DGCDAA++TLGG    + ++RVDY GN N+IE+AGILG+TR+VL++S+GCGSS++A    V++VL+  L AK  AENIL+KYYTN++WTIIRPG LK+  ATG AILTED    G I+REDVA L +QAL SP+T +KIL+A+DP
Sbjct:   55 KVFVAGGSKGVGRLVVDKLVGSGTGVVALVRSEEAAAELNALDGVTAVIGDAFDYKAVEGAMDGCDAAMSTLGGGTVEEGKQRVDYEGNSNVIEAAGILGVTRVVLITSIGCGSSKEAAPPSVFEVLKDVLSAKERAENILIKYYTNTNWTIIRPGGLKSEPATGKAILTEDNMAIGSIHREDVAALAIQALTSPKTKQKILSAVDP 261          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A7S0AIJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIJ9_9STRA)

HSP 1 Score: 247 bits (631), Expect = 5.110e-79
Identity = 126/209 (60.29%), Postives = 162/209 (77.51%), Query Frame = 1
Query:   19 RVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGA--PGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDP 639
            +VFVAGG++GVGR ++D L+  GS+VVALVR  +A+ EL A++GV     DA D K VEG +DGCDAA+TT+G    P G+  KRVDY GN N+IE+AGILG+TR+VLV+S+GCGSS++A    V++VL+  L AK  AEN+L+KYYTN +WTI+RPG LK+  ATGTAILTE+    G I+REDVA+LVVQALNS  T RKIL+A+DP
Sbjct:   59 KVFVAGGSRGVGRAVVDGLLSAGSEVVALVRTDEAEAELSALDGVTVARGDAFDYKAVEGAMDGCDAAITTMGQGTDPVGENGKRVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIVRPGGLKSEPATGTAILTENNLAIGSIHREDVADLVVQALNSGNTERKILSAVDP 267          
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Match: A0A1E7FCE8_9STRA (NAD(P)-binding protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCE8_9STRA)

HSP 1 Score: 249 bits (635), Expect = 5.710e-79
Identity = 124/209 (59.33%), Postives = 166/209 (79.43%), Query Frame = 1
Query:   16 KRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVEAVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESAGILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYTNSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPRTVRKILTAIDPS 642
            K++FVAGG+KGVG  ++ KL E+G++VVALVR + +K+ELD I+GV A++ DA D KGVE  +DGCDAA+TTLGG  G   ++RVDY GN N+IESAGILG+ R++L++S+GCGSS++A    V++VL+  L+AK  AENIL+ YYTNS+W+IIRPG L +   TG AILTED KT G I+REDVA+LV++ L+S  T RKIL+A+DPS
Sbjct:  103 KKIFVAGGSKGVGHAIVTKLSERGTEVVALVRSEKSKKELDKIDGVTAILGDAFDQKGVENAMDGCDAAITTLGGTTG---DRRVDYEGNNNVIESAGILGVQRIILLTSIGCGSSKEAAPPAVFEVLKDVLEAKEKAENILMDYYTNSNWSIIRPGGLVSEVMTGQAILTEDNKTIGSIHREDVADLVIKVLDSTNTERKILSAVDPS 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1650.4097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ06_ECTSI1.080e-12078.95Epimerase/dehydrogenase n=1 Tax=Ectocarpus silicul... [more]
A0A835Z825_9STRA7.130e-8862.28Epimerase/dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
A0A7S3L6R6_9STRA5.990e-8761.43Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7FVE3_PHATC3.190e-8560.99Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2V5P0_9STRA7.300e-8360.56Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6U3NUE1_9STRA1.990e-8159.33Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2HK64_9STRA2.190e-8158.85Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2UDM5_9STRA3.000e-8160.87Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0AIJ9_9STRA5.110e-7960.29Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A1E7FCE8_9STRA5.710e-7959.33NAD(P)-binding protein n=1 Tax=Fragilariopsis cyli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1650contigH-elongata_contig1650:251..1692 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue1.7e-93
Seed eggNOG ortholog2880.D7FJ06
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
COG Functional cat.GM
BiGG ReactioniRC1080.CRv4_Au5_s6_g13409_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionepimerase/dehydrogenase
Ec32 orthologEc-07_004910.1
Exons3
Model size693
Cds size687
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1650.4097.1prot_H-elongata_contig1650.4097.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1650 257..1692 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929965.7554893-UTR-H-elongata_contig1650:250..2561622929965.7554893-UTR-H-elongata_contig1650:250..256Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1650 251..256 +
1691679226.929307-UTR-H-elongata_contig1650:250..2561691679226.929307-UTR-H-elongata_contig1650:250..256Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1650 251..256 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929965.7755494-CDS-H-elongata_contig1650:256..3981622929965.7755494-CDS-H-elongata_contig1650:256..398Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1650 257..398 +
1691679226.943032-CDS-H-elongata_contig1650:256..3981691679226.943032-CDS-H-elongata_contig1650:256..398Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1650 257..398 +
1622929965.7919106-CDS-H-elongata_contig1650:1043..12881622929965.7919106-CDS-H-elongata_contig1650:1043..1288Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1650 1044..1288 +
1691679226.9576097-CDS-H-elongata_contig1650:1043..12881691679226.9576097-CDS-H-elongata_contig1650:1043..1288Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1650 1044..1288 +
1622929965.811869-CDS-H-elongata_contig1650:1392..16921622929965.811869-CDS-H-elongata_contig1650:1392..1692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1650 1393..1692 +
1691679226.9685872-CDS-H-elongata_contig1650:1392..16921691679226.9685872-CDS-H-elongata_contig1650:1392..1692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1650 1393..1692 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1650.4097.1

>prot_H-elongata_contig1650.4097.1 ID=prot_H-elongata_contig1650.4097.1|Name=mRNA_H-elongata_contig1650.4097.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
MVCKRVFVAGGAKGVGRVLIDKLVEQGSDVVALVRRKDAKEELDAINGVE
AVVCDALDLKGVEGVLDGCDAAVTTLGGAPGGDEEKRVDYTGNRNIIESA
GILGITRLVLVSSVGCGSSRDAISDGVYQVLEKALKAKTMAENILLKYYT
NSDWTIIRPGELKNNEATGTAILTEDIKTAGVINREDVANLVVQALNSPR
TVRKILTAIDPSKDSRYESLAQPEPFEF*
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mRNA from alignment at H-elongata_contig1650:251..1692+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1650.4097.1 ID=mRNA_H-elongata_contig1650.4097.1|Name=mRNA_H-elongata_contig1650.4097.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1442bp|location=Sequence derived from alignment at H-elongata_contig1650:251..1692+ (Himanthalia elongata Himel1 dioecious)
TTGCGGATGGTATGCAAAAGGGTGTTCGTTGCAGGCGGTGCCAAGGGGGT TGGACGTGTCCTGATCGACAAGCTGGTGGAGCAAGGATCTGACGTTGTGG CCCTGGTTCGTAGAAAAGATGCCAAGGAGGAGTTGGACGCCATCAATGGT AGGCCGCGTACGCTTTTTTTTTTTTAAACATATGATTTCATTCAAACCCT CCGAACATCCACGCCTTCTTTTTGCCTCATGAGAGGTGAAGTTCAGGGAA CCAACTATCGTCAAGTTCGAGTGCGCACAAAATCGTCACATGTGATTAAG CTTGTTCCCCAATAATAATCGCATCGGGTGAATATTATAGTCCCGAGGAG AAGCCTGCCGTTACAATCTTCACCTACACTAGTCGTTTGGGGACCCCAAA TCAGAGTATAGTAGAGAGTGAGCAGAATCCACGCCTTCTTTGCGCCATGA GAGGGAAGTCCAGGGAACCAACTATCGTCAAGTTCGAATGTGCACAAAAT CGTCACATATTATTAATCTTGTCCCCCAATAATAATCGCATCGGTCGAAT AGTATAGTGTCGGGGAGAAGCCTACCGTTATACTGTTCACTTACATTAGT CATGCTGGGACGCCAAATCAGAGGATAGCAGAGAGTTCGAAGGCAAAGAG AAGAGGGGGCTTATTTCAAGAGCGTCGATAGGCTTATAAAATAGATATAC TTACGTGTTCCGAGTGCATTAAGTTTCTAGCGTCGTTAATCCATTCTCCA AACTAGAAACTGAAACGCCTACAACGCCCCGCTATCACGACAGGCGTAGA GGCCGTGGTGTGCGACGCGTTGGACCTCAAGGGTGTAGAGGGTGTCCTCG ACGGCTGCGATGCTGCTGTTACCACTCTCGGAGGGGCCCCAGGGGGAGAT GAGGAAAAACGAGTCGATTACACTGGAAATCGCAACATTATCGAATCTGC TGGGATTCTCGGCATCACCCGTCTTGTATTGGTGTCTAGTGTTGGCTGTG GCAGCAGCCGGGATGCCATCAGCGATGGTGTGTATCAGGTGATGAGTGCA ACAGCTTCGATTACTTGTTGATAGACCGCCGCGGAATAATATTTCCTGAG CGTTTCCTGACTATCGTGTATCTTTATTTACCTCGTGAACAGGTACTGGA AAAGGCCCTCAAGGCGAAAACCATGGCAGAGAACATTCTTCTGAAATATT ATACCAATTCTGATTGGACAATTATACGTCCTGGTGAACTCAAGAATAAT GAGGCAACCGGAACTGCAATCCTGACCGAGGACATCAAGACAGCTGGAGT CATCAATCGAGAAGATGTTGCTAACTTAGTTGTTCAAGCCTTGAATTCAC CTAGAACTGTTAGAAAGATACTAACAGCAATTGATCCGAGTAAAGATAGT CGATACGAATCTTTGGCACAACCTGAGCCGTTTGAGTTTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig1650:251..1692+

>mRNA_H-elongata_contig1650.4097.1 ID=mRNA_H-elongata_contig1650.4097.1|Name=mRNA_H-elongata_contig1650.4097.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig1650:251..1692+ (Himanthalia elongata Himel1 dioecious)
ATGGTATGCAAAAGGGTGTTCGTTGCAGGCGGTGCCAAGGGGGTTGGACG
TGTCCTGATCGACAAGCTGGTGGAGCAAGGATCTGACGTTGTGGCCCTGG
TTCGTAGAAAAGATGCCAAGGAGGAGTTGGACGCCATCAATGATGGTATG
CAAAAGGGTGTTCGTTGCAGGCGGTGCCAAGGGGGTTGGACGTGTCCTGA
TCGACAAGCTGGTGGAGCAAGGATCTGACGTTGTGGCCCTGGTTCGTAGA
AAAGATGCCAAGGAGGAGTTGGACGCCATCAATGGCGTAGAGGCCGTGGT
GTGCGACGCGTTGGACCTCAAGGGTGTAGAGGGTGTCCTCGACGGCTGCG
ATGCTGCTGTTACCACTCTCGGAGGGGCCCCAGGGGGAGATGAGGAAAAA
CGAGTCGATTACACTGGAAATCGCAACATTATCGAATCTGCTGGGATTCT
CGGCATCACCCGTCTTGTATTGGTGTCTAGTGTTGGCTGTGGCAGCAGCC
GGGATGCCATCAGCGATGGTGTGTATCAGGCGTAGAGGCCGTGGTGTGCG
ACGCGTTGGACCTCAAGGGTGTAGAGGGTGTCCTCGACGGCTGCGATGCT
GCTGTTACCACTCTCGGAGGGGCCCCAGGGGGAGATGAGGAAAAACGAGT
CGATTACACTGGAAATCGCAACATTATCGAATCTGCTGGGATTCTCGGCA
TCACCCGTCTTGTATTGGTGTCTAGTGTTGGCTGTGGCAGCAGCCGGGAT
GCCATCAGCGATGGTGTGTATCAGGTACTGGAAAAGGCCCTCAAGGCGAA
AACCATGGCAGAGAACATTCTTCTGAAATATTATACCAATTCTGATTGGA
CAATTATACGTCCTGGTGAACTCAAGAATAATGAGGCAACCGGAACTGCA
ATCCTGACCGAGGACATCAAGACAGCTGGAGTCATCAATCGAGAAGATGT
TGCTAACTTAGTTGTTCAAGCCTTGAATTCACCTAGAACTGTTAGAAAGA
TACTAACAGCAATTGATCCGAGTAAAGATAGTCGATACGAATCTTTGGCA
CAACCTGAGCCGTTTGAGTTTTGAGTACTGGAAAAGGCCCTCAAGGCGAA
AACCATGGCAGAGAACATTCTTCTGAAATATTATACCAATTCTGATTGGA
CAATTATACGTCCTGGTGAACTCAAGAATAATGAGGCAACCGGAACTGCA
ATCCTGACCGAGGACATCAAGACAGCTGGAGTCATCAATCGAGAAGATGT
TGCTAACTTAGTTGTTCAAGCCTTGAATTCACCTAGAACTGTTAGAAAGA
TACTAACAGCAATTGATCCGAGTAAAGATAGTCGATACGAATCTTTGGCA
CAACCTGAGCCGTTTGAGTTTTGA
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