mRNA_H-elongata_contig163702.4029.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A6H5K6W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W5_9PHAE) HSP 1 Score: 240 bits (612), Expect = 4.180e-79 Identity = 115/131 (87.79%), Postives = 126/131 (96.18%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
QADVMIAGGSEAAMTPLCFAGFCSMRAMVT++NDDP++ASRPFDKDRAGFVMGEGAGV+ILETEEHAL+RGATIYCEVAGYGATCDAHHITAPAPDGNGLARAI +MKMGGI+ ++M+GGYINA GT TP
Sbjct: 13 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTSFNDDPEKASRPFDKDRAGFVMGEGAGVLILETEEHALARGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIGASMKMGGIEAKDMVGGYINAHGTSTP 143
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: D8LRQ2_ECTSI (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ2_ECTSI) HSP 1 Score: 239 bits (610), Expect = 6.860e-75 Identity = 114/131 (87.02%), Postives = 126/131 (96.18%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
+ADVMIAGGSEAAMTPLCFAGFCSMRAMVT++NDDP++ASRPFDKDRAGFVMGEGAGV+ILETEEHAL+RGATIYCEVAGYGATCDAHHITAPAPDGNGLARAI +MKMGGI+ ++M+GGYINA GT TP
Sbjct: 249 EADVMIAGGSEAAMTPLCFAGFCSMRAMVTSFNDDPEKASRPFDKDRAGFVMGEGAGVLILETEEHALARGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIGASMKMGGIEAEDMVGGYINAHGTSTP 379
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A836CDS1_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS1_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.650e-68 Identity = 104/131 (79.39%), Postives = 120/131 (91.60%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
+ADVM+AGGSEAAMTPLCFAGF +M+AMVT++NDDP +ASRPFDKDRAGFVMGEGAGV++LETE HAL+RGATIYCEV GYGATCDAHHITAPAPDG+GL RAIE A+K G++P++M GGYINA GT TP
Sbjct: 231 EADVMLAGGSEAAMTPLCFAGFAAMKAMVTSFNDDPHKASRPFDKDRAGFVMGEGAGVLLLETEAHALARGATIYCEVVGYGATCDAHHITAPAPDGSGLGRAIETALKRAGMKPEDMEGGYINAHGTSTP 361
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A7S1XSM4_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSM4_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.660e-62 Identity = 98/131 (74.81%), Postives = 115/131 (87.79%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
+AD+MIAGGSEAA+TPLCFAGF SM+AMVT+YNDDP +ASRPFDKDRAGFVMGEG GV++LETEEHA +RGA IYCE AGYGATCDAHHITAP P+G GL+RAI AM+ GG++ +++ GYINA GT TP
Sbjct: 221 EADIMIAGGSEAALTPLCFAGFASMKAMVTSYNDDPTKASRPFDKDRAGFVMGEGCGVLVLETEEHAKARGAKIYCEFAGYGATCDAHHITAPHPEGKGLSRAITQAMETGGVEAEDI--GYINAHGTSTP 349
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A7S0M182_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M182_9CRYP) HSP 1 Score: 200 bits (508), Expect = 8.170e-60 Identity = 97/131 (74.05%), Postives = 114/131 (87.02%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
QAD+M+AGGSEAAMTPLCFAGF +MRAMVT++ND+P RASRP+DK R GFVMGEG GVV+LETEEHAL+RGA IYCE+AGYGATCDAHHITAP P+G GLA AI MA+ GG++P+E+ YIN+ GT TP
Sbjct: 236 QADMMLAGGSEAAMTPLCFAGFAAMRAMVTSFNDEPLRASRPYDKRRDGFVMGEGCGVVLLETEEHALARGAEIYCELAGYGATCDAHHITAPHPEGLGLAGAIRMALNNGGVKPEEV--DYINSHGTSTP 364
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: R1F3A0_EMIHU (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F3A0_EMIHU) HSP 1 Score: 189 bits (481), Expect = 3.480e-57 Identity = 92/131 (70.23%), Postives = 109/131 (83.21%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
+ DVM+AGGSEAA+TPL FAGF SMRAM T+ NDDP++ASRPFD DRAGFVMGEG+GV++LETEEHAL RGA IYCE+AGY ATCDAHHITAP P+G G+A +E AM+ G+ P+E+ YINA GT TP
Sbjct: 104 ECDVMLAGGSEAAVTPLGFAGFNSMRAMCTSANDDPQKASRPFDADRAGFVMGEGSGVLLLETEEHALRRGAKIYCEIAGYAATCDAHHITAPHPEGEGMAACLETAMEAAGVAPEEVQ--YINAHGTSTP 232
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A7S1DVF7_HEMAN (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DVF7_HEMAN) HSP 1 Score: 191 bits (484), Expect = 3.630e-56 Identity = 91/131 (69.47%), Postives = 109/131 (83.21%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
QADV++AGG+E+A+TPL FAGF +MRAM T +NDDP +ASRPFDKDRAGFVMGEG V+ LETEEHAL+RGA IYCE+AG+GA+CDAHHITAP P+G GLA AI A+K GG+ P E+ Y+NA GT TP
Sbjct: 246 QADVILAGGTESAVTPLAFAGFAAMRAMATDFNDDPLKASRPFDKDRAGFVMGEGGAVLCLETEEHALARGAEIYCELAGFGASCDAHHITAPHPEGRGLAAAISQALKTGGVSPDEI--DYVNAHGTSTP 374
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A7S0HBR4_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HBR4_9CRYP) HSP 1 Score: 185 bits (470), Expect = 4.610e-56 Identity = 89/131 (67.94%), Postives = 110/131 (83.97%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVTP 393
+ADVM+AGGSE ++TPL FAGF ++RAM T++N+DP ASRPFDK R GFVMGEGAGV++LETEEHAL+RGA IYCE AGYGA+CDA+HITAP P+G GLA AI MA++ G ++P+E+ YINA GT TP
Sbjct: 59 KADVMLAGGSECSLTPLAFAGFAALRAMTTSFNEDPLAASRPFDKKRDGFVMGEGAGVLLLETEEHALARGAEIYCEFAGYGASCDAYHITAPHPEGRGLASAISMALRSGEVKPEEV--DYINAHGTSTP 187
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A7R9WFI4_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WFI4_9STRA) HSP 1 Score: 188 bits (477), Expect = 3.350e-55 Identity = 89/129 (68.99%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 4 ADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVT 390
AD+MIAGG+EA +TPLC+AGFC+M+AM T YNDDP SRPFD DR GFVMGEGAGVV+LE+ E A RGA IYCE+ GYGATCDAHHIT PAP+G GLA+A+EMAMKM G++ +E+ Y+NA GT T
Sbjct: 239 ADMMIAGGTEATITPLCYAGFCAMKAMATKYNDDPTAGSRPFDSDRGGFVMGEGAGVVLLESLESAKKRGAKIYCEMVGYGATCDAHHITTPAPEGRGLAKAMEMAMKMSGMEKEEV--SYLNAHGTST 365
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Match: A0A7S2V4P4_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4P4_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.160e-54 Identity = 84/130 (64.62%), Postives = 105/130 (80.77%), Query Frame = 1
Query: 1 QADVMIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEGAGVVILETEEHALSRGATIYCEVAGYGATCDAHHITAPAPDGNGLARAIEMAMKMGGIQPQEMMGGYINAPGTVT 390
QAD+M+AGGSEA +TPL FAGFCSM AM +ND PK+ASRPFD DR GFVM EGAGV+++E+EEHA+ RGA IYCE+AGYGA+CDAHHIT P P+G GLA+A+EMA++ G+ ++ Y+NA GT T
Sbjct: 139 QADMMLAGGSEAGITPLSFAGFCSMNAMAKNFNDQPKKASRPFDSDRCGFVMAEGAGVILIESEEHAIKRGAKIYCELAGYGASCDAHHITTPQPEGAGLAQALEMALESAGVDKSDVT--YVNAHGTST 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163702.4029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig163702.4029.1 >prot_H-elongata_contig163702.4029.1 ID=prot_H-elongata_contig163702.4029.1|Name=mRNA_H-elongata_contig163702.4029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp MIAGGSEAAMTPLCFAGFCSMRAMVTTYNDDPKRASRPFDKDRAGFVMGEback to top mRNA from alignment at H-elongata_contig163702:282..1411+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig163702.4029.1 ID=mRNA_H-elongata_contig163702.4029.1|Name=mRNA_H-elongata_contig163702.4029.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1130bp|location=Sequence derived from alignment at H-elongata_contig163702:282..1411+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig163702:282..1411+ >mRNA_H-elongata_contig163702.4029.1 ID=mRNA_H-elongata_contig163702.4029.1|Name=mRNA_H-elongata_contig163702.4029.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=768bp|location=Sequence derived from alignment at H-elongata_contig163702:282..1411+ (Himanthalia elongata Himel1 dioecious)back to top |