mRNA_H-elongata_contig163561.4022.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE) HSP 1 Score: 138 bits (347), Expect = 2.750e-36 Identity = 68/95 (71.58%), Postives = 83/95 (87.37%), Query Frame = 1
Query: 1 EAQIKSEILRYRGMNSIDIISNPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLVTVRGAIASGVLDKY 285
+AQ+KSE+LRYRG+ S++ NPL WWD+H+ T PLLREL+ ILCVPASSA+SERLFSKA LTLTK+RS L G+RVAQLVT+RGA+A+GVLDKY
Sbjct: 480 DAQMKSEVLRYRGVTSMNPDGNPLTWWDQHKATFPLLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLVTLRGAVAAGVLDKY 574
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: D8LDT4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT4_ECTSI) HSP 1 Score: 103 bits (258), Expect = 7.490e-24 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 4 AQIKSEILRYRGMNSIDIISNPLAWWDEHQV--TLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLVTVRGAIASGVLDKY 285
AQI+ E+LRYR ++ ID ++PL WW++ Q + P LREL +LCVPA SASS+R+FSK L KR++L GSRVA +T+RGA+A G+LDKY
Sbjct: 819 AQIRWEVLRYRALDKIDSEADPLLWWEQEQQRWSFPFLRELVMRVLCVPACSASSKRVFSKTGLVDNSKRARLRGSRVAPRLTIRGAVACGLLDKY 914
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A6H5KHJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ9_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 5.800e-22 Identity = 52/95 (54.74%), Postives = 69/95 (72.63%), Query Frame = 1
Query: 4 AQIKSEILRYRGMNSIDIISNPLAWWDEHQV--TLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLVTVRGAIASGVLDK 282
AQI+ E+LRYR ++ ID S+PL WW++ Q + P LR+LA +LCVPA SASS+RLF K + KR++L GSRVAQ +TV GA+A G+LDK
Sbjct: 385 AQIRWEVLRYRALDKIDSESDPLLWWEQGQQRWSFPSLRQLAMRVLCVPACSASSKRLFFKTGVVGNSKRARLRGSRVAQRLTVCGAVACGLLDK 479
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A1A8SLH3_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8SLH3_9TELE) HSP 1 Score: 68.2 bits (165), Expect = 1.980e-12 Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 19 EILRYRGMNSIDIISNPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLV 243
EI +YRG + + NPL+WW H+ P L ++A S+LC+P +S S+ER+FS A +T +RS L V QLV
Sbjct: 64 EIKKYRGEAPLPLTENPLSWWKNHEQDYPQLSKIAKSLLCIPGTSVSAERVFSSAGDIVTAQRSLLKAEHVDQLV 138
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A1A8EXC3_9TELE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Nothobranchius korthausae TaxID=1143690 RepID=A0A1A8EXC3_9TELE) HSP 1 Score: 68.2 bits (165), Expect = 8.860e-12 Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 19 EILRYRGMNSIDIISNPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLV 243
EI +YRG + + NPL+WW H+ P L ++A S+LC+P +S S+ER+FS A +T +RS L V QLV
Sbjct: 150 EIQKYRGEAPLPLTENPLSWWKNHEQDYPQLSKIAKSLLCIPGTSVSAERVFSSAGDIVTAQRSLLKAEHVDQLV 224
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A1A8L5D9_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8L5D9_9TELE) HSP 1 Score: 68.2 bits (165), Expect = 2.670e-11 Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 19 EILRYRGMNSIDIISNPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLV 243
EI +YRG + + NPL+WW H+ P L ++A S+LC+P +S S+ER+FS A +T +RS L V QLV
Sbjct: 408 EIKKYRGEAPLPLTENPLSWWKNHEQDYPQLSKIAKSLLCIPGTSVSAERVFSSAGDIVTAQRSLLKAEHVDQLV 482
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A1A8NK20_9TELE (BED-type domain-containing protein n=2 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8NK20_9TELE) HSP 1 Score: 68.2 bits (165), Expect = 2.730e-11 Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 19 EILRYRGMNSIDIISNPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLV 243
EI +YRG + + NPL+WW H+ P L ++A S+LC+P +S S+ER+FS A +T +RS L V QLV
Sbjct: 541 EIKKYRGEAPLPLTENPLSWWKNHEQDYPQLSKIAKSLLCIPGTSVSAERVFSSAGDIVTAQRSLLKAEHVDQLV 615
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE) HSP 1 Score: 64.3 bits (155), Expect = 6.320e-11 Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 10 IKSEILRYRGMNSIDIISNPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQL 240
I++E+L Y G S+ +PL WW ++ P L +LA S+LC+PA+S SERLFS A ++KKR+ L+ V L
Sbjct: 60 IQNEVLAYFGEQSLPKKDDPLIWWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLSPEHVDML 136
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A2S2PKJ7_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PKJ7_SCHGA) HSP 1 Score: 64.3 bits (155), Expect = 9.870e-11 Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 64 NPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLVTVR 252
+P WW EH+ P + ++A ++LC+PASSASSER+FS A +T KR++LN V+ LV ++
Sbjct: 103 DPCVWWKEHETIYPTIAKVAKNMLCIPASSASSERVFSTAGNIVTSKRNRLNAKNVSTLVFLK 165
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Match: A0A8C1JAT0_CYPCA (BED-type domain-containing protein n=6 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A8C1JAT0_CYPCA) HSP 1 Score: 65.9 bits (159), Expect = 1.770e-10 Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 1 EAQIKSEILRYRGMNSIDIIS-NPLAWWDEHQVTLPLLRELATSILCVPASSASSERLFSKARLTLTKKRSKLNGSRVAQLV 243
+AQ + E+ RY+ + + +PL+WW EHQ PL+ LA LC+P +S SSER+FSKA +T +RS L+ V QL+
Sbjct: 531 QAQAEEEMSRYKEAPPLSLAEGSPLSWWKEHQNEYPLMSRLAKVYLCIPGTSVSSERVFSKAGDIVTAQRSVLSSKHVDQLL 612 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163561.4022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig163561.4022.1 >prot_H-elongata_contig163561.4022.1 ID=prot_H-elongata_contig163561.4022.1|Name=mRNA_H-elongata_contig163561.4022.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp EAQIKSEILRYRGMNSIDIISNPLAWWDEHQVTLPLLRELATSILCVPASback to top mRNA from alignment at H-elongata_contig163561:93..380+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig163561.4022.1 ID=mRNA_H-elongata_contig163561.4022.1|Name=mRNA_H-elongata_contig163561.4022.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=288bp|location=Sequence derived from alignment at H-elongata_contig163561:93..380+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig163561:93..380+ >mRNA_H-elongata_contig163561.4022.1 ID=mRNA_H-elongata_contig163561.4022.1|Name=mRNA_H-elongata_contig163561.4022.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at H-elongata_contig163561:93..380+ (Himanthalia elongata Himel1 dioecious)back to top |