mRNA_H-elongata_contig16330.4012.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: D8LKC3_ECTSI (Carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKC3_ECTSI) HSP 1 Score: 914 bits (2363), Expect = 0.000e+0 Identity = 468/651 (71.89%), Postives = 528/651 (81.11%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVGGDDGSG----IKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVVPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRRYSVDADIEGWGSFGAQGEVTLWCRHGPIESDSHSRHRYEMTVRRHRGRGA-GTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTLRP 1938
AQA+HPGYGFLSENA FA+ CASAG+TF+GPP AID MGSKSVAK IMSDAGVPVCPGYHGEDQSDAFLEEEA RVG+P+MIKAVMGGGGKGMRLV + +GF+ ALEACRREA A FAD+RMLLER+VN PRHVEVQVFADT+GNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRA+LG+AAV AAKAVGYVGAGTVEFLMDTRT EFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQ LPL +QAD+ L GHA+EARICAE V +GFLP AGTLRR RLPSG +K RVDTGVQEGD VS +YDPMVAKLIVH TR + GL++ALR+FQVVGLPTN++FCERVA HR F GGVTTAFLE+HGDEVVPSP T PPPPHA+VLAS A+L E+ A P+D SPWSA +GPWRAVG RK++L A+A+ D+A G G D A + VECL +GGYVVEM G + V G ++D GG +TA VDGRRYS+DA +EGWG+ GA+GEVTLWC HGP+E D + R+RYE+ V R RGRGA G+S + S G V SPMPGRVVRV+AE+GQDV QELMILEAMKMEH + APFAG VD+ +V GDLVDEG VL+TL+P
Sbjct: 106 AQAVHPGYGFLSENATFAKQCASAGVTFIGPPEKAIDQMGSKSVAKAIMSDAGVPVCPGYHGEDQSDAFLEEEAKRVGFPVMIKAVMGGGGKGMRLVQTPEGFQSALEACRREAAAGFADDRMLLERYVNEPRHVEVQVFADTLGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAELGEAAVRAAKAVGYVGAGTVEFLMDTRTQEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQELPLKNQADIPLVGHAIEARICAENVARGFLPVAGTLRRMRLPSGAXXXXXXXXXXXGEVKIRVDTGVQEGDAVSVHYDPMVAKLIVHAPTRSAGLHGLRKALRDFQVVGLPTNIDFCERVAGHRGFEEGGVTTAFLEEHGDEVVPSPET--MPPPPHAVVLASVAVLLEEQTAVTFPNDTSPWSARSGPWRAVGVRKQKL----ALASRDTAA--------GADGADEAGSEVTVECLADGGYVVEMQGARFAVSGAQLDAGGAMTAIVDGRRYSLDATVEGWGAVGAEGEVTLWCNHGPLEGDGYDRNRYELVVTRPRGRGARGSSKSTAESTGRVTSPMPGRVVRVLAESGQDVEKGQELMILEAMKMEHTVPAPFAGKVDLVSYVAGDLVDEGSVLITLKP 742
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: A0A6H5JUX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX9_9PHAE) HSP 1 Score: 715 bits (1845), Expect = 2.550e-246 Identity = 398/652 (61.04%), Postives = 449/652 (68.87%), Query Frame = 1
Query: 4 QALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVGGDDGSG----IKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVVPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRR-YSVDADIEGWGSFGAQG-EVTLWCRHGPIESDSHSRHRYEMTVRRHRGRGA-GTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTLRP 1938
QALHPGYGFLSENA FA+ CASAG+TF+GPP AID MGSKSVAK IMSDAGVPVCPGYHGEDQSDAFLEEEA R+G+P+MIKAVMGGGGKGMRLV + +GF+ ALEACRREA A FAD+RMLLER HQKVLEEAPAPGISDATRA+LG+AAV AAKAVGYVGAGTVEFLMDTRT EFFFCEMNTRLQVEH VTEMVTGLDLVEWQLRVAAGQ LPL +QAD+ L GHA+EARICAE V +GFLP AGTLRR RLPS G +K RVDTGVQEGD VS +YDPMVAKLIVH TR + + GL++ALR+FQVVGLPTN++FCERVA HR F GGVTTAFLE+HGDE E+AA P+D SPWSA +GPWRAVG RK++LV + + G G D A VECL +GGYVVE G + V G ++D GG +TA VDGRR V D G +G L S S YE+ V R RGRGA G+S +A S G V+SPMPGRVVRV+AE+G+DV QELMILEAMKMEH + APFAG VD+ +V GDLVDEG VL+TL+P
Sbjct: 110 QALHPGYGFLSENATFAKQCASAGVTFIGPPEKAIDQMGSKSVAKAIMSDAGVPVCPGYHGEDQSDAFLEEEAKRMGFPLMIKAVMGGGGKGMRLVQTPEGFQSALEACRREAAAGFADDRMLLER---------------------------------HQKVLEEAPAPGISDATRAELGEAAVRAAKAVGYVGAGTVEFLMDTRTQEFFFCEMNTRLQVEHSVTEMVTGLDLVEWQLRVAAGQELPLKNQADIPLVGHAIEARICAENVARGFLPVAGTLRRMRLPSRAGSXXXXXXXXXXEVKIRVDTGVQEGDAVSVHYDPMVAKLIVHAPTRSEGLHGLRKALRDFQVVGLPTNIDFCERVAGHRGFEEGGVTTAFLEEHGDEXXXXXXXXXXXX--XXXXXXXXXXXXEEQAAVTFPNDTSPWSARSGPWRAVGVRKQKLVLSSR------------ETAAGANGADDAGLEVTVECLADGGYVVETHGARFAVSGAQLDAGGAMTAIVDGRRAVFVGCDRGRLGRCRRRGGSYALVQPRAAGRRRSRSTQVYELVVTRPRGRGARGSSKSAAESTGRVSSPMPGRVVRVLAESGEDVEKGQELMILEAMKMEHTVPAPFAGKVDLVSYVAGDLVDEGSVLITLKP 714
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: A0A835Z489_9STRA (Carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z489_9STRA) HSP 1 Score: 623 bits (1607), Expect = 5.490e-210 Identity = 361/664 (54.37%), Postives = 433/664 (65.21%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKG-FLPAAGTLRRWRLPSGVGVGGDDGSGIKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVVPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNS-----------------PWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRRYSVDADIEGWGSFGAQGEVTLWCRHGPIESDSHSRHRYEMTV--RRHRGRGAGTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTL 1932
AQA+HPGYGFLSENANFA+ CA AGITFVGPP AI +MGSKS+AKTIMS AGVPV PGYHGEDQS L +EA +GYP++IKAVMGGGGKGMR+V + F ALEAC+RE+ SF D R+LLE+F+ RHVEVQVFADT+GN V+L ERDCSVQRRHQKVLEEAPAP +S R LG+AAV AA+AVGYVGAGTVEFLMD T EFFFCEMNTRLQVEHPVTEMV G DLVEWQLRVA+GQPLP+ DQ+ ++ GHA+EAR+ AE KG FLPA GTL R R P+ GG+ + RVDTGV+EGDTVS +YDPM+AKL+ G TR+ A++ L ALRE+QV+G+PTNL F ER H AF GGVTT FLE +G ++ + A PPPHA+ L + AL+ V + PWSA+ WR R + S+ E GG E + V+C +G YVV V+ T + G L ATV+G RY A + G FG VTLW GP+E DS R RY++ V R G AG +S A+ G + +PMPG+V+RVMA+ G V A Q L+I+EAMKMEH + A AGTV H EG LV E VLVT+
Sbjct: 108 AQAIHPGYGFLSENANFAQACADAGITFVGPPASAILSMGSKSMAKTIMSAAGVPVTPGYHGEDQSPERLLQEANAIGYPVLIKAVMGGGGKGMRIVHTHKDFLGALEACQRESAKSFGDARVLLEKFIAESRHVEVQVFADTLGNVVYLSERDCSVQRRHQKVLEEAPAPHLSQEVRTGLGEAAVRAARAVGYVGAGTVEFLMDAATQEFFFCEMNTRLQVEHPVTEMVMGQDLVEWQLRVASGQPLPVIDQSLLQPLGHAIEARVYAENTSKGLFLPATGTLTRMRPPA---QGGNSRGMV--RVDTGVREGDTVSMHYDPMIAKLLAWGETREAALTRLASALREYQVLGVPTNLEFAERCVRHPAFVAGGVTTKFLETYGAQLAQFTA---AAPPPHAVALGALALMLKREGRIVAAAHSGGSGGSGXXXXXXXXRXGPWSAAAXXWRVSSHGMRRCAL-------------RLSASTDEEGGKATEVS--VDCAADGSYVVAGVPVSGT-----LTADGALAATVEGHRYHCSAAVSE-GGFGGAASVTLWHPSGPVEGDSQWRPRYDLKVPARASAGARAGGTSGAM---GVLKAPMPGKVIRVMAKLGAAVTAGQALVIMEAMKMEHTVTAHAAGTVGAVHCEEGQLVSEAAVLVTM 739
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: A0A4D9CSW2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSW2_9STRA) HSP 1 Score: 573 bits (1478), Expect = 4.730e-191 Identity = 337/649 (51.93%), Postives = 415/649 (63.94%), Query Frame = 1
Query: 4 QALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLP-SGVGVGGDDGSGIKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEV-VPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALD-GQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRRYSVDADIEGWGSFGAQGEVTLWCRHGPIESDSHSRHRYEMTVRRHRGRGAGTSSAALAS--VGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTLR 1935
QALHPGYGFLSEN +FA C SAG+ FVGPP A+ +MGSK+ AK IM++AGVPV P Y+GEDQ DA L EA +VGYP+MIKAV GGGGKGMR V+++ F ALEACRREA SF +RML+E+++ PRH+E+QVF D GNAVHL ERDCSVQRRHQKVLEE+PAPG+ +A R ++G+AAVLAAKAVGY GAGTVEFL+D + F+FCEMNTRLQVEH VTEMVTG+DLVEWQLRVAAG+PLP+ +QAD+R GHA+EARI AE KGFLPA G+L+R R P S GV RV+TGV EGD VS YYDPM+AKL+ +R +A+ + R LR++Q+ GLP NL F ER H AF RGGVTT FL ++ +V +P PS PP PH L LA+ AL + A P +PW G WR VG R + F AL G V E GG G + +P+G +SG +G ATV+G Y A IE G G V LW R G + D R + + V A LA + + +PMPG++V+V+ + G+ V Q L+ILEAMKMEHVI AP TVD GD+V EG+ LV+L+
Sbjct: 95 QALHPGYGFLSENPDFAEMCQSAGVVFVGPPVPALRSMGSKAAAKRIMTEAGVPVTPAYYGEDQDDARLLAEAEKVGYPVMIKAVTGGGGKGMRRVMAAADFIPALEACRREALKSFGRDRMLIEKYLVNPRHIELQVFGDRHGNAVHLHERDCSVQRRHQKVLEESPAPGLGEAIREEMGRAAVLAAKAVGYTGAGTVEFLLDPASQRFYFCEMNTRLQVEHCVTEMVTGVDLVEWQLRVAAGEPLPVREQADIRARGHAIEARIYAENPAKGFLPATGSLKRLRTPVSEEGV---------VRVETGVVEGDEVSMYYDPMIAKLLTWAPSRPEALRRMARVLRDYQIAGLPNNLEFLERCVGHPAFERGGVTTGFLVEYEADVSIPPPS----PPSPHLLALAAYALTQQREA----PRGGTPWLG--GAWRGVGRRTLPVEFVVDGLEESFALKAGVMDGGVQEGGGGGRHAWGLRVEMPDG-QAYRVSGPRCEGDRASGAHGDEWEATVEGVTYKYSAWIEDGGMRGGA-RVQLWLRSGGLVDDPLQRTTFSLRVP------AAALGHELAGGVIPRILAPMPGKLVKVLVKAGEAVRKGQSLLILEAMKMEHVIAAPQDATVDSVARAVGDVVQEGIPLVSLK 716
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: A0A067CDC1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CDC1_SAPPC) HSP 1 Score: 530 bits (1365), Expect = 2.050e-174 Identity = 311/652 (47.70%), Postives = 404/652 (61.96%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVGGDDGSGIKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVV-PSPSTEDAPPPPHALVLASAALLRHE---RAAF--VDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRRYSVDADIEGWGSFGAQGEVTLWCRHGPIESDSHSRHRYEMTVRRHR--GRGAGTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTL 1932
AQA+HPGYGFLSENA FAR CA+A + F+GPP AI+AMGSKS +K IM AGVPV PGYHG+DQS + +EA ++GYP+++KAV+GGGGKGMR+V S A++AC+REA ASFA +L+E+++ PRHVE+Q+F D GN VHLFERDCSVQRRHQKVLEEAPAP +S+A R K+G AAV AAKAVGYVGAGTVEFL+D F+F EMNTRLQVEHPVTE +T DLVE QL+VAAGQ LP+ Q D+++ GHA+EARI AE FLP +G L RLP RVDTG+ +GD VS +YDPM+AKL+VHG R+ A+ GL RAL+++Q+VGLPTN+ F R AAH F +GGV T+FL +GD+V+ P PS PPHA VL + ALL + +AAF D +SPWS S +R++ D P + V CL + + V + G +D G +D Y+ A + + ++ L+C G + D Y++T+ G GAG A+ + +PMPG++++VMA+ G + +Q L+I+EAMKMEHVI AP G V + GD V +G VLV L
Sbjct: 99 AQAIHPGYGFLSENAAFARACAAANVEFIGPPVPAIEAMGSKSASKDIMIQAGVPVTPGYHGDDQSYERIRDEAAKIGYPVLLKAVLGGGGKGMRIVDSEAELEEAMDACKREAKASFASTDILVEKYLRRPRHVELQIFGDKHGNVVHLFERDCSVQRRHQKVLEEAPAPNMSEALRKKMGDAAVAAAKAVGYVGAGTVEFLLD-EDESFYFMEMNTRLQVEHPVTEFITQQDLVEMQLKVAAGQKLPVA-QEDLKIHGHAIEARIYAENPYNNFLPGSGKLHHLRLPP---------LSDSVRVDTGIVQGDAVSIFYDPMIAKLVVHGKDRQDALDGLVRALKQYQIVGLPTNIEFVARTAAHPEFVKGGVDTSFLNKYGDDVLAPYPSL-----PPHAPVLGAIALLLQQQQAKAAFEPTTADPSSPWS-SLKNYRSLETLHRTFSL---------QHDAHPMNFD-------------VACLADNVFDVVVDGAPAQRVSGSIDASGDFNLVIDTHAYTGTAVVY-------KNDLHLFCNDGSLRYD------YKLTIPEASFDGEGAGAGGAS-----SLVTPMPGKIIKVMAKAGDVIKEDQPLLIMEAMKMEHVIRAPRDGVVGEINCDVGDFVTDGHVLVEL 693
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: T0RQ69_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RQ69_SAPDV) HSP 1 Score: 529 bits (1362), Expect = 5.760e-174 Identity = 314/656 (47.87%), Postives = 408/656 (62.20%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVGGDDGSGIKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVV-PSPSTEDAPPPPHALVLASAALLRHE---RAAF--VDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETAC----VVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRRYSVDADIEGWGSFGAQGEVTLWCRHGPIESDSHSRHRYEMTVRRHR--GRGAGTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTL 1932
AQA+HPGYGFLSENA FAR CA+A + F+GPP AI+AMGSKS +K IM AGVPV PGYHG+DQS + +EA ++GYP+++KAV+GGGGKGMR+V + A++AC+REA ASFA +L+E+++ PRHVE+Q+F D GN VHLFERDCSVQRRHQKVLEEAPAP +S+A R K+G AAV AAKAVGYVGAGTVEFL+D F+F EMNTRLQVEHPVTE +T DLVE QL+VAAGQ LP+ Q D+++ GHA+EARI AE FLP +GTL RLP RVDTG+ +GD VS +YDPM+AKL+VHG R+ A+ GL RAL+++Q+VGLPTN+ F R AAH F +GGV T+FL +GD+V+ P PS PPHA VL + ALL + +AAF D SPWS S +R++ S ET + AC V + + +G +SG +D G +D Y+ A + + ++ L+C G + D Y++T+ G GAG A+ + +PMPG++++VMA+ G + A+Q L+I+EAMKMEHVI AP G V + GD V +G VLV L
Sbjct: 99 AQAIHPGYGFLSENAAFARACAAANVEFIGPPVPAIEAMGSKSASKNIMIKAGVPVTPGYHGDDQSYERIRDEAVKIGYPVLLKAVLGGGGKGMRIVDTEAELEEAMDACKREAKASFASTDILVEKYLRRPRHVELQIFGDKHGNVVHLFERDCSVQRRHQKVLEEAPAPNMSEALRKKMGDAAVAAAKAVGYVGAGTVEFLLD-EDESFYFMEMNTRLQVEHPVTEFITQQDLVEMQLKVAAGQKLPVA-QEDLKIHGHAIEARIYAENPYNNFLPGSGTLHHLRLPP---------LSDSVRVDTGILQGDAVSIFYDPMIAKLVVHGKDRQDALDGLVRALKQYQIVGLPTNIEFVARTAAHPEFVKGGVDTSFLTKYGDDVLAPYPSL-----PPHAPVLGAIALLLQQQQAKAAFEPTTADPASPWS-SLKNYRSLETLHRTF------------------SLQHETHPMTFDVACLADNVFDVVVDGAPAQRVSG--------SIDPSGDFNLVIDTHAYTGTAVVY-------KNDLHLFCNDGSLRYD------YKLTIPEASFDGDGAGAGGAS-----SLVTPMPGKIIKVMAKAGDTIKADQPLLIMEAMKMEHVIRAPRDGVVGEMNCDVGDFVTDGHVLVEL 693
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: A0A2N6J5I7_9BURK (Acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha n=7 Tax=Herbaspirillum TaxID=963 RepID=A0A2N6J5I7_9BURK) HSP 1 Score: 524 bits (1350), Expect = 1.790e-172 Identity = 313/656 (47.71%), Postives = 411/656 (62.65%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHE---FFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVG-GDDGSG--IKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVVPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGR--LTATVDGRRYSVDADIEG-W-GSFGAQGEVTLWCRH-GPIESDSHSRHRYEMTVRRHRGRGAGTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTLR 1935
AQA+HPGYGFLSENA FA+ CA AG+ F+GPP AI AMGSKS AK +M A VP+ PGYHGE Q FL EA R+GYP+++KA GGGGKGMR+V S+ F AL +C+REA +SF D+R+L+E+++ PRH+E+QVFAD GN V+LFERDCSVQRRHQKVLEEAPAPG+S RA +G+AAV AA+AVGYVGAGTVEF+ D + + F+F EMNTRLQVEHPVTEM+TGLDLVEWQLRVAAG+ LPL A +R++GHA+EARI AE KGFLP+ GTL R R + V G++G+G R+D+GV+EGD +S +YDPM+AKLIV GA R A+ + RAL ++QVVGL TN+ F +R+ A +AFA + T +E H D + P+P P L LA+AA+L+ E+ A D D PW+ ++G WR + R R + D D P++ + GDG + + G +T+ D GG+ + ++DGR + EG W F QG+ +L RH P+ HS A G + +PMPG++V ++ + G VA L+I+EAMKMEH I AP AG V+ + GD V EG L+ +
Sbjct: 75 AQAIHPGYGFLSENAEFAQACADAGLVFIGPPASAIRAMGSKSAAKALMETAAVPLVPGYHGERQESDFLRSEADRIGYPVLLKASAGGGGKGMRVVERSEDFEAALASCKREAISSFGDDRVLVEKYLTRPRHIEIQVFADGQGNCVYLFERDCSVQRRHQKVLEEAPAPGMSCGRRAAMGEAAVAAARAVGYVGAGTVEFIADYSSGQDGSFYFMEMNTRLQVEHPVTEMITGLDLVEWQLRVAAGEALPLEQDA-LRINGHAIEARIYAENPEKGFLPSIGTLTRMRSAAAVEFRLGENGAGQPAPVRIDSGVREGDAISPFYDPMIAKLIVWGADRHAALRNMARALAQYQVVGLATNIGFLQRLIAGQAFATADLDTGLIERHRDSLFPAPVR----PGIDTLALAAAAILQQEQQAGSDTD---PWAHTSG-WR-LNTRLLRSL--------DFEDDSGPATVQLDYAGDGRHWTLLAD------------GGKHTLA---FDPGGQDGVLVSLDGRTLRAEVQREGEWLHIFDGQGQRSL--RHLDPMAHAGHSE----------------------AEGGRLTAPMPGKIVALLVQKGASVAQGAPLLIMEAMKMEHTIAAPSAGVVEDLLYAVGDQVTEGAQLLEFK 673
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: A0A238HCJ5_9BURK (Methylcrotonyl-CoA carboxylase biotin-containing subunit n=4 Tax=Burkholderia TaxID=32008 RepID=A0A238HCJ5_9BURK) HSP 1 Score: 523 bits (1346), Expect = 5.310e-172 Identity = 314/648 (48.46%), Postives = 397/648 (61.27%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVGGDDGSGIKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVVPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVT----YTVGGVEMDYGGRLTATVDGRRYSVDADIEGWGSFGAQGEVTLWCRHGPIESDSHSRHRYEMTVRRHRGRGAGTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTL 1932
AQA+HPGYGFLSEN FAR CA AGI F+GPP DAI AMGSK+ AK +M A VP+ PGYHG+DQ+ L EA R+GYP+++KA GGGGKGMR+V ++ F AL +C+REA ASF ++R+L+E+++ PRHVEVQVF DT GNAV+LF+RDCSVQRRHQKVLEEAPAPG+ D R +G AAV AA+AVGYVGAGTVEF+M T F+F EMNTRLQVEHPVTEMVTGLDLVEWQLRVAAG+PLPL Q+ +R+ GHAVEAR+ AE V+GFLP+ GTL+ RLP GV + G R+D+GV+EGD ++ +YDPM+AKLI HG TR QA++ L RALRE +VVGL TN F +R+ R FA + T +E H D ++ + DAP AL LA AAL E+ A + SPWSA + WR G+ L + A D AL V +G +++ GV +T G +D+ G R VD D + F QG + +E H + T G + +PMPG+V+ V+ E GQ V L+++EAMKMEH I AP AG V + GD V +G L+ L
Sbjct: 75 AQAIHPGYGFLSENEEFARACAEAGIVFIGPPIDAIAAMGSKAAAKALMQAAAVPLVPGYHGDDQAADLLRREADRIGYPVLLKASAGGGGKGMRVVERAEDFAAALVSCQREAAASFGNDRVLIEKYLQRPRHVEVQVFGDTFGNAVYLFDRDCSVQRRHQKVLEEAPAPGLPDNVRQAMGAAAVAAARAVGYVGAGTVEFIMTGDT--FYFMEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGEPLPL-QQSQLRVRGHAVEARLYAENPVRGFLPSTGTLKHLRLPEGV----EFALGAAVRIDSGVREGDAITPFYDPMIAKLIAHGETRAQALATLVRALRECEVVGLQTNAAFLQRIVESRPFADADLDTGLIERHRDALL---APRDAPAA--ALALACAALFAREQDAARCGEIVSPWSALSN-WRLNGSYARTLEW--RALADDVALT-------------------VRHAQDHGEQTLQIDGVARPFVWTRGAGPLDFDVMFGGVRTGGRVYVDGDT--FHVF-CQGVACAFEWRNLLE------HAADSTE----------------GEGRLTAPMPGKVIAVLVEPGQKVEQGDPLIVMEAMKMEHTIGAPAAGVVGEVLYAVGDQVADGAQLLIL 663
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: UPI00197E44A3 (acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Burkholderia sp. Ac-20379 TaxID=2703900 RepID=UPI00197E44A3) HSP 1 Score: 518 bits (1334), Expect = 3.420e-170 Identity = 308/652 (47.24%), Postives = 406/652 (62.27%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHEFFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVGGDDGSGIKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEV-VPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRRYS--VDADIEGWGSFGAQGEVTLWCRHGPIESDSHSRHRYEMTVRRHRGRGAGTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTLRPPAS 1947
AQA+HPGYGFLSEN FA+ CA+AG+ F+GPP +AI AMGSK+ AK +M AGVP+ PGYHG+DQ A L EA +GYP+++KA GGGGKGMR+V S F AL +C+REA +SF ++R+L+E+++ PRHVEVQVF DT+GN V+LF+RDCSVQRRHQKVLEEAPAPG+ DA R +G+AAV AA+AVGYVGAGTVEF++ +F+F EMNTRLQVEHPVTEMV+GLDLVEWQLR A+G+PLPL QA +R+SGHA+EAR+ AE +GFLP+ GTLR RLP GV + G RVD+GV+EGD ++ +YDPM+AKLIVHGA R++A+ + RALR+ + VGL TN F +R+ A FA G + T +E H D + P P + P A+ LA AALL + A P SPW+A G WR GA + L G + +SAL + + G T V + P ++ G +D+ T+ +R + V A+ + + F AQG + P+ + H G + +PMPG+V+ V+ E GQ V A L+++EAMKMEH I AP AG V + GD V +G L+ L A+
Sbjct: 75 AQAVHPGYGFLSENEAFAQACAAAGLVFIGPPVNAIAAMGSKAAAKALMQRAGVPLVPGYHGDDQDPALLHREADAIGYPVLLKASAGGGGKGMRVVERSADFPAALASCQREAASSFGNDRVLIEKYLQRPRHVEVQVFGDTLGNTVYLFDRDCSVQRRHQKVLEEAPAPGLPDAQRRAMGEAAVAAARAVGYVGAGTVEFIVTGE--QFYFMEMNTRLQVEHPVTEMVSGLDLVEWQLRAASGEPLPL-GQAQLRVSGHAIEARLYAESPARGFLPSTGTLRHLRLPDGV----EFSIGAPVRVDSGVREGDAITPFYDPMIAKLIVHGADREEALKRMARALRDCEAVGLSTNAAFLQRIVASEPFATGDLDTGLIERHHDALFAPQPLS------PVAVALACAALLARDDAPAEGP--GSPWAA-LGNWRLNGAYRRTL--GWQLRERESALRVEYAQ------GATDATLAVGDAGP--------LPFAWSRGATPLDF----VVTIGTQRGAGRVVAEGDAFHVF-AQGSAETFDWANPLAHAGDTEH----------------------GGGRLTAPMPGKVIAVLVEPGQAVEAGAPLLVMEAMKMEHTIGAPNAGVVAEVLYAVGDQVADGAQLIRLDASAA 667
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Match: A0A246WPQ1_9BURK (3-methylcrotonyl-CoA carboxylase n=3 Tax=Herbaspirillum TaxID=963 RepID=A0A246WPQ1_9BURK) HSP 1 Score: 518 bits (1333), Expect = 6.230e-170 Identity = 303/652 (46.47%), Postives = 389/652 (59.66%), Query Frame = 1
Query: 1 AQALHPGYGFLSENANFARDCASAGITFVGPPPDAIDAMGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGGGGKGMRLVLSSDGFRRALEACRREAGASFADERMLLERFVNMPRHVEVQVFADTMGNAVHLFERDCSVQRRHQKVLEEAPAPGISDATRAKLGQAAVLAAKAVGYVGAGTVEFLMDTRTHE---FFFCEMNTRLQVEHPVTEMVTGLDLVEWQLRVAAGQPLPLTDQADVRLSGHAVEARICAEKVVKGFLPAAGTLRRWRLPSGVGVG---GDDGSGIKTRVDTGVQEGDTVSTYYDPMVAKLIVHGATRKQAISGLKRALREFQVVGLPTNLNFCERVAAHRAFARGGVTTAFLEDHGDEVVPSPSTEDAPPPPHALVLASAALLRHERAAFVDPDDNSPWSASTGPWRAVGARKERLVFGTAVAAGDSALDGQPSSCVGETGGDGAETACVVECLPNGGYVVEMSGVTYTVGGVEMDYGGRLTATVDGRRYSVDADIEGWGSFGAQGEVTLWCRHG-PIESDSHSRHRYEMTVRRHRGRGAGTSSAALASVGEVASPMPGRVVRVMAETGQDVAANQELMILEAMKMEHVIIAPFAGTVDVTHFVEGDLVDEGVVLVTLR 1935
AQ +HPGYGFLSENA+FA+ CA AG+ F+GPP AI AMGSKS AK +M A VP+ PGYHGE Q FL EA R+GYP+++KA GGGGKGMR+V S+ F AL +C+REA +SF D+R+L+E+++ PRH+E+QVFADT GN V+LFERDCSVQRRHQKVLEEAPAPG++ RA +G+AAV AA+AVGYVGAGTVEF+ D E F+F EMNTRLQVEHPVTEM+TG DLVEWQLRVA+G+PLPL Q +R++GHA+EARI AE KGFLP+ GTL R R S V GD R+D+GV+EGD +S +YDPM+AKLIV GA R+ A+ + RAL ++QVVGL TN+ F +R+ A AF++ + T +E H + + P+P A P L A+ A+L E + D PWS++ G WR G L F GD +E +G ++G +E G + T+DGR D EG G R+ P+ HS A G + +PMPG++V V+ E G V L+I+EAMKMEH I AP GTV+ + GD V EG L+ +
Sbjct: 75 AQGIHPGYGFLSENADFAQACADAGLVFIGPPASAIRAMGSKSAAKALMEKAAVPLVPGYHGERQESEFLRGEADRIGYPVLLKASAGGGGKGMRVVERSEDFAAALASCKREAISSFGDDRVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCSVQRRHQKVLEEAPAPGMTAERRAAMGEAAVAAARAVGYVGAGTVEFIADYSNGEDGSFYFMEMNTRLQVEHPVTEMITGQDLVEWQLRVASGEPLPLK-QDQLRIAGHAIEARIYAENPEKGFLPSIGTLARMRTASAVEFRLHQGDVSQPAAVRIDSGVREGDAISPFYDPMIAKLIVWGADREAALRNMSRALAQYQVVGLATNIGFLQRLVAGAAFSQADLDTGLIERHHETLFPAP----AAPALETLAFAAVAVLNEEGSKS---DKADPWSSANG-WRMNGKLLRALEFA----------------------GDAGAARLQLEYAGDGNSWTLLTGGASHALRIESVTSGACSITLDGRLLRADVVREGELLHVFDGRAQRSLRYADPMAHAGHSE----------------------AEGGRLTAPMPGKIVAVLVEKGGSVDKGAPLLIMEAMKMEHTIAAPADGTVEDLLYAVGDQVAEGAQLLEFK 673 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16330.4012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16330.4012.1 >prot_H-elongata_contig16330.4012.1 ID=prot_H-elongata_contig16330.4012.1|Name=mRNA_H-elongata_contig16330.4012.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=615bp MGSKSVAKTIMSDAGVPVCPGYHGEDQSDAFLEEEAGRVGYPMMIKAVMGback to top mRNA from alignment at H-elongata_contig16330:2238..7472- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16330.4012.1 ID=mRNA_H-elongata_contig16330.4012.1|Name=mRNA_H-elongata_contig16330.4012.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5235bp|location=Sequence derived from alignment at H-elongata_contig16330:2238..7472- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16330:2238..7472- >mRNA_H-elongata_contig16330.4012.1 ID=mRNA_H-elongata_contig16330.4012.1|Name=mRNA_H-elongata_contig16330.4012.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3690bp|location=Sequence derived from alignment at H-elongata_contig16330:2238..7472- (Himanthalia elongata Himel1 dioecious)back to top |