mRNA_H-elongata_contig16265.3974.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE) HSP 1 Score: 320 bits (821), Expect = 4.910e-95 Identity = 193/419 (46.06%), Postives = 250/419 (59.67%), Query Frame = 1
Query: 1 LRMMVLATAGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLPTRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDK--------DGHDDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPVLK-------------------GLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDSQERQA----------------------LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 1110
LRMMVL TAG GKS+LV A+S +LG +R AAPTG AFLI GSTLHSLL+LP R G+ LQG+S K LQ L G++Y++ +ELSMVSQ+Q+A VDR LRQ T ++ FGG +++T D GQL PVGG L+ P L+ EG+ AY F+ V ILD+ DD++ F+ELLP R+G L + D LLL R P+ + F ATRLFYS+ EV YN LR + PV + GL+R + +A+ A+VML++ L+ +VGLVNGIR E VELV A P LP +++V+F Y+ + R+ L LC ITMHKSQ QT+ AVIDL EA +GLTFVC+S AK LVDL+VEP+SFDR+ LG +
Sbjct: 1141 LRMMVLGTAGTGKSYLVYALSRLLGGFLRRAAPTGMAAFLIAGSTLHSLLRLPVRQGRNLQGQSLKALQNSLTGVKYIIIDELSMVSQSQMAWVDRRLRQGTA-VDKPFGGISLIMTGDLGQLQPVGGTPLYKQNPAAALNVEGYAAYSLFQDVFILDRVQRQTAAAANDDDQRGFIELLPRARDGQLCDEDWDLLLKRQPNRLTAAEKAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYLAKGAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 1558
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A) HSP 1 Score: 239 bits (610), Expect = 5.060e-69 Identity = 149/412 (36.17%), Postives = 224/412 (54.37%), Query Frame = 1
Query: 7 MMVLATAGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLPT--RAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKD-----GHDDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
++++ AG GKS+L+NA+ +L ++ A TG +F I G T+HSLLKLP R + L G++ +LQ L+ +EY++ +E SM+ Q +D+ +QATG +++ GG +++ DPGQLPPV L+ A P + + ++G+ Y+ F KV+ L + +++ F ELL +R G T D +LLLTR P E FN ATRLFYS EV YN + L + P + GLQ + IA+ A+VMLT LW+ VGL NG V++++A + P LP ++VRF Y P+ +D QERQ L L L +T+HKSQ T+ A ID+ KSE T G+++V IS K L L++EP++F+RL+ +
Sbjct: 277 LIIIGVAGTGKSYLINALRSLLQNKCSVTATTGKASFNIQGITVHSLLKLPVGPRGAKDLSGQTLSRLQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQATGFHDKVHGGMSMILIGDPGQLPPVVDKPLYHAQPSNPIGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLLTRQP--SCIENISEFNDATRLFYSNDEVSAYNLDQLTKLMEPCANINARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGPSLREDLPMCVPICPITVSAQALEGVQERQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAI 686
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6S7ISR5_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7ISR5_PARCT) HSP 1 Score: 233 bits (594), Expect = 6.190e-65 Identity = 146/406 (35.96%), Postives = 220/406 (54.19%), Query Frame = 1
Query: 25 AGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLP--TRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKDGH-----DDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
AG GKS+L+NA+ ++L S+ AA TG AF I G T+HSLLKLP +R + L G+S +LQ +D + Y++ +E SM+ Q +D+ +QATG+ +++FGG +++T DPGQLPPV L+ A P + + ++G AY F KV+ L + ++ F +LL +R G T D +LLLTR P + F +TRLFYS +V +YN L + P+ + GL+ V +A+ ARVMLT LWS VGL NG V++++ + + P LP ++V F Y P ++ ERQ L L L +T+HKSQ T+ A ID+ KSE T+G+++V IS K L ++EP++++RL+ L
Sbjct: 691 AGTGKSYLINAIRNLLQSKCAVAATTGKAAFNIRGVTVHSLLKLPIGSRGNKDLTGQSLCRLQESVDNIGYIIIDEYSMLGQVTFGWIDKRCKQATGSNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGDSTVADWKLLLTRQPSNVSNLC--DFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNENQPLGIPIYPITVTSQTEIGFHERQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSL 1094
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6S7JIW3_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JIW3_PARCT) HSP 1 Score: 232 bits (592), Expect = 1.110e-64 Identity = 145/411 (35.28%), Postives = 222/411 (54.01%), Query Frame = 1
Query: 7 MMVLATAGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLPT--RAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILD-----KDGHDDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPVLK-------------------GLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPA------CM------------QDSQERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
++++ G GKS+L+NAV + L + A TG +F I+G T+HS LKLP + + L G+S LQ L ++Y+V +E SM+ Q + +D+ RQATG ++LFGG +++ DP QLPPVG L+ + P + ++++G AY+ F V+ILD + D+ F +L +R G L+ D +LLL R P + F ATRL+YS EV +N + L + TP+ + GLQ + I + A+VMLT LW+ VGL NG V++++A P LP +LV+F Y P C+ + ERQ L L L +T+HKSQ T+E A +D+ K E T G+T+V +S A++L L++EP+++DRLS +
Sbjct: 684 LVIIGEGGTGKSFLINAVRNYLKEKCIVTATTGKASFNINGITIHSFLKLPVGKMSQKDLSGQSLDNLQKNLLSVDYIVIDEYSMLGQTTMGWIDKRCRQATGLKDKLFGGKSIILIGDPAQLPPVGDKPLYHSKPSNPIAEQGSLAYKMFNNVVILDVNQRIRGSQHDQTLFKGILSRLRIGELSCNDWKLLLARQPTVLSNL--NDFIDATRLYYSNDEVAKFNYDHLMQLETPIAEICARHSGSNAKSVSAQEMFGLQPTILICKGAKVMLTMNLWASVGLCNGASGTIVDIIYAKDHHPPDLPIAVLVKFDEYRGPNFCSIPFCVPIPPVTASVNIDNKTLERQQLPLTLAWALTIHKSQGMTLEKAWVDIGKKECTLGITYVALSRARNLTSLVIEPMTYDRLSSI 1092
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A7D9JFR3_PARCT (ATP-dependent DNA helicase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFR3_PARCT) HSP 1 Score: 227 bits (579), Expect = 1.880e-64 Identity = 144/406 (35.47%), Postives = 217/406 (53.45%), Query Frame = 1
Query: 25 AGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLP--TRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKDGH-----DDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
AG GKS+L+NA+ ++L S+ AA TG A+ I G T+HSLLKLP R + L G+S +LQ ++ + Y++ +E SM+ Q +D+ +QATG+ +++FGG +++T DPGQLPPV L+ A P + + ++G AY F KV+ L + ++ F +LL +R G T D +LLLTR P F +TRLFYS +V +YN L + P+ + GL+ V +A+ ARVMLT LWS VGL NG V++++ + + P LP ++V F Y P + ERQ L L L +T+HKSQ T+ A ID+ KSE T+G+++V IS K L ++EP++++RL+ L
Sbjct: 293 AGTGKSYLINAIRNLLQSKCAVAATTGKAAYNIRGVTVHSLLKLPIGARGNKDLTGQSLCRLQESVNNIGYIIIDEYSMLGQVTFGWIDKRCKQATGSNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGDSTVDDWKLLLTRQPSNVTNLC--DFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKRISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQYNHQPPDLPIAVIVEFENYRGPVFNESRPLCIPIYPITVTSQTEIGFHERQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSL 696
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6S7G8V4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G8V4_PARCT) HSP 1 Score: 229 bits (583), Expect = 2.020e-64 Identity = 145/406 (35.71%), Postives = 218/406 (53.69%), Query Frame = 1
Query: 25 AGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLP--TRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKDGH-----DDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
AG GKS+L+NA+ ++L S+ AA TG AF I G T+HSLLKLP +R + L G+S +LQ ++ + Y++ +E SM+ Q +D+ +QATG +++FGG +++T DPGQLPPV L+ A P + + ++G AY F KV+ L + ++ F +LL +R G T D +LLLTR P F +TRLFYS +V +YN L + P+ + GL+ V +A+ ARVMLT LWS VGL NG V++++ + + P LP ++V F Y P ++ ERQ L L L +T+HKSQ T+ A ID+ KSE T+G+++V IS K L ++EP++++RL+ L
Sbjct: 393 AGTGKSYLINAIRNLLQSKCAVAATTGKAAFNIRGVTVHSLLKLPVGSRGNKDLTGQSLCRLQESVNNIGYIIIDEYSMLGQVTFGWIDKRCKQATGCNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGDSTVDDWKLLLTRQPSNVTNLC--DFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNENQPLCIPICPITVTSQTEIGFHERQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSL 796
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6S7GPP1_PARCT (ATP-dependent DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GPP1_PARCT) HSP 1 Score: 232 bits (591), Expect = 2.850e-64 Identity = 147/406 (36.21%), Postives = 219/406 (53.94%), Query Frame = 1
Query: 25 AGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLP--TRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKDGH-----DDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
AG GKS+L+NA+ ++L ++ A TG A+ I G T+HSLLKLP +R + L G+S +LQ L + Y++ +E SM+ Q +D+ +QATG +++FG +++T DPGQLPPV L+ A P + + ++G AYR F KVI L + D+ F +LL +R G T D +LLLTR P + + F+ ATRLFYS +V +YN L + P+ + GL+ V +A+ ARVMLT LWS VGL NG V++V+ ++ P LP ++V F Y P ++ ERQ L L L +T+HKSQ T+ A ID+ KSE T+G+++V IS K L ++EP++++RL+ L
Sbjct: 1206 AGTGKSYLINAIRNLLQNKCAVTATTGKAAYNIKGVTIHSLLKLPIGSRGAKDLTGQSLCRLQQNLKDINYIIIDEYSMLGQVTFGWIDKRCKQATGCHDKVFGEKSLILTGDPGQLPPVADKPLYHAKPSNAVGEQGHQAYRMFDKVIKLTVNQRVQGMTSDQVLFRDLLLRLRKGESTLDDWKLLLTRQPSSVSNL--SEFDDATRLFYSNEQVANYNHEQLTKLANPIAHINARHSSAVAKKMPSDEMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTIVDIVFQNNQNPPDLPIAVIVNFENYRGPHFSEERPMCVPICPITVSSQTEGGFHERQQLPLRLAWALTIHKSQGLTLSKAWIDVGKSERTAGVSYVAISRVKTLASCVIEPMTYERLTSL 1609
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A7D9LKR7_PARCT (ATP-dependent DNA helicase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LKR7_PARCT) HSP 1 Score: 225 bits (573), Expect = 1.390e-63 Identity = 143/406 (35.22%), Postives = 217/406 (53.45%), Query Frame = 1
Query: 25 AGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLP--TRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKDGH-----DDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
AG GKS+L+NA+ ++L S+ AA TG A+ I G T+HSLLKLP +R + L G+S +LQ ++ + Y++ +E SM+ Q +D+ +QATG +++FGG +++T DPGQLPPV L+ A P + + ++G AY F KV+ L + ++ F +LL + G T D +LLLTR P F +TRLFYS +V +YN L + P+ + GL+ V +A+ ARVMLT LWS VGL NG V++++ + + P LP ++V F Y P ++ ERQ L L L +T+HKSQ T+ A ID+ KSE T+G+++V IS K L ++EP++++RL+ L
Sbjct: 294 AGTGKSYLINAIRNLLQSKCAVAATTGKAAYNIRGVTVHSLLKLPIGSRGKKDLTGQSLCRLQESVNNIGYIIIDEYSMLDQVTFGWIDKRCKQATGYNDKVFGGKSLILTGDPGQLPPVADKPLYHAKPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQIQFRDLLLRLHKGDSTVDDWKLLLTRQPSNVTNLC--DFEDSTRLFYSNEQVGNYNHEQLTKLEHPIAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNENQPLCIPICPITVASQTEIGFHERQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSL 697
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6S7I8Z0_PARCT (ATP-dependent DNA helicase (Fragment) n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I8Z0_PARCT) HSP 1 Score: 229 bits (585), Expect = 1.700e-63 Identity = 146/406 (35.96%), Postives = 218/406 (53.69%), Query Frame = 1
Query: 25 AGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLP--TRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKDGH-----DDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
AG GKS+L+NA+ ++L S+ AA TG A+ I G T+HSLLKLP +R + L G+S +LQ ++ + Y++ +E SM+ Q +D+ +QATG +++FGG +++T DPGQLPPV L+ A P + + ++G AY F KV+ L + ++ F +LL +R G T D +LLLTR P F +TRLFYS +V +YN L + PV + GL+ V +A+ ARVMLT LWS VGL NG V++++ + + P LP ++V F Y P ++ ERQ L L L IT+HKSQ T+ A ID+ KSE T+G+++V IS K L ++EP++++RL+ L
Sbjct: 1139 AGTGKSYLINAIRNLLQSKCAVAATTGKAAYNIRGVTVHSLLKLPIGSRGNKDLTGQSLCRLQESVNNIGYIIIDEYSMLGQVTFGWIDKRCKQATGYNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGDSTVDDWKLLLTRQPSNVTNLC--DFEDSTRLFYSNEQVANYNHEQLTKLEHPVAHINARHSSALAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNENQPLCIPIYPITVTSQTEIGFHERQQLPLRLAWAITIHKSQGLTLPKAWIDIGKSERTTGVSYVAISRVKSLASCVIEPMTYERLTSL 1542
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A7D9HMH4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HMH4_PARCT) HSP 1 Score: 228 bits (582), Expect = 4.420e-63 Identity = 145/406 (35.71%), Postives = 218/406 (53.69%), Query Frame = 1
Query: 25 AGMGKSWLVNAVSHMLGSRIRCAAPTGNTAFLIDGSTLHSLLKLP--TRAGQPLQGESPKKLQVPLDGLEYLVTNELSMVSQAQLA*VDRILRQATGNTEELFGGSFVVVTEDPGQLPPVGGMTLHVALPKDQLSQEGFNAYRSFRKVIILDKDGH-----DDKKAFLELLPHVRNGLLTEGD*RLLLTRAPHAKAEEPRKHFNGATRLFYSRVEVKDYNCNILRVVGTPV-------------------LKGLQRKVCIARDARVMLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 1101
AG GKS+L+NA+ ++L S+ AA TG A+ I G T+HSLLKLP +R + L G+S +LQ ++ + Y++ +E SM+ Q +D+ +QATG +++FGG +++T DPGQLPPV L+ A P + + ++G AY F KV+ L + ++ F +LL +R G T D +LLLTR P F +TRLFYS +V +YN L + PV + GL+ V +A+ ARVMLT LWS VGL NG V++++ + + P LP ++V F Y P ++ ERQ L L L +T+HKSQ T+ A ID+ KSE T+G+++V IS K L ++EP++++RL+ L
Sbjct: 1445 AGTGKSYLINAIRNLLQSKCAVAATTGKAAYNIRGVTVHSLLKLPIGSRGKKDLTGQSLCRLQESVNNIGYIIIDEYSMLGQVTFGWIDKRCKQATGYNDKVFGGKSLILTGDPGQLPPVADKPLYHARPSNAVGEQGHQAYHMFDKVVKLTVNQRVQGMTSEQVQFRDLLLRLRKGNSTVDDWKLLLTRQPSNVTNLC--DFEDSTRLFYSNEQVANYNHEQLTKLEHPVAHINARHSSAFAKKISSDDMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTVVDIIYQNNHQPPDLPIAVIVEFENYRGPVFNENQPLCIPIYPITVTSQTEIGFHERQQLPLRLAWALTIHKSQGLTLPKAWIDIGKSERTAGVSYVAISRVKSLASCVIEPMTYERLTSL 1848 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16265.3974.1 >prot_H-elongata_contig16265.3974.1 ID=prot_H-elongata_contig16265.3974.1|Name=mRNA_H-elongata_contig16265.3974.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACback to top mRNA from alignment at H-elongata_contig16265:3719..4996+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16265.3974.1 ID=mRNA_H-elongata_contig16265.3974.1|Name=mRNA_H-elongata_contig16265.3974.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1278bp|location=Sequence derived from alignment at H-elongata_contig16265:3719..4996+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16265:3719..4996+ >mRNA_H-elongata_contig16265.3974.1 ID=mRNA_H-elongata_contig16265.3974.1|Name=mRNA_H-elongata_contig16265.3974.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig16265:3719..4996+ (Himanthalia elongata Himel1 dioecious)back to top |