mRNA_H-elongata_contig16262.3973.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16262.3973.1
Unique NamemRNA_H-elongata_contig16262.3973.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA)

HSP 1 Score: 117 bits (294), Expect = 1.410e-25
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 3 
Query:   63 MSNTQG-DAQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            M+ T G DA  KKVVMVTGGTGLVG GIKEFV +D EAK  EEY+FLSSK+GD+R+M +TK IFEKYKPTHVIHLAARV
Sbjct:    1 MAETSGTDAAPKKVVMVTGGTGLVGCGIKEFVESDAEAKEKEEYIFLSSKDGDIRNMEETKLIFEKYKPTHVIHLAARV 79
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BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A7S1UTT3_9STRA (GDP-L-fucose synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTT3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.280e-19
Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 3 
Query:   78 GDAQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            G+A  KKVVMVTGG+GLVG GI+ FV     AK NEE+V+LSSK+GDLRD   T+AIFEKYKPTHVIHLAA+V
Sbjct:    3 GEAAGKKVVMVTGGSGLVGQGIRAFVEQSG-AKENEEWVYLSSKDGDLRDRKSTEAIFEKYKPTHVIHLAAKV 74
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BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: W7TZW1_9STRA (GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZW1_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.850e-18
Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 3 
Query:   90 SKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV----RENAQFVQ 320
            +KKVV++TGGTGLVG GI++F+++DP A+ +E YVFLSSK+GDLRD AQT AIFEK++P +V+HLAA V    R  AQ V+
Sbjct:  280 NKKVVLITGGTGLVGKGIEDFISSDPIAQESESYVFLSSKDGDLRDKAQTYAIFEKHRPAYVVHLAALVGGLFRNMAQKVE 360
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BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A6T7DWV8_9STRA (GDP-L-fucose synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 5.660e-18
Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 3 
Query:   87 QSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            + ++VV+VTGG+GLVG GIK F+  D EA  NEE+VFLSSK+GDL+    T+AIF +YKPTHVIHLAA+V
Sbjct:   62 KKERVVLVTGGSGLVGQGIKSFIATDAEAAANEEWVFLSSKDGDLKSRTDTEAIFRRYKPTHVIHLAAKV 131
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BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A4Q2DQ45_9AGAR (Epimerase domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DQ45_9AGAR)

HSP 1 Score: 89.0 bits (219), Expect = 6.490e-18
Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 3 
Query:   84 AQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKM-----NEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            A S  V++VTGGTGLVG  IK  V  +PE         E++VF SS EGDLRD AQT+A++EKYKPTHVIHLAA V
Sbjct:    2 ASSSNVILVTGGTGLVGKAIKHIVETEPEGSRFGKLPGEKWVFASSSEGDLRDPAQTRALYEKYKPTHVIHLAALV 77
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BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A6S7GHY1_PARCT (GDP-L-fucose synthase-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GHY1_PARCT)

HSP 1 Score: 89.7 bits (221), Expect = 1.920e-17
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 3 
Query:   93 KKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            KKV+MVTGGTGLVG  ++  +    E + NEE++FLSSK+GDL +M  TKAIFEKYKPTHVIHLAA V
Sbjct:    4 KKVIMVTGGTGLVGQAVRS-IAEAEERRENEEWIFLSSKDGDLGNMEATKAIFEKYKPTHVIHLAAMV 70
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BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A7S3PXQ5_9STRA (GDP-L-fucose synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXQ5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.710e-17
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 3 
Query:   93 KKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            K V MVTGG+GLVG  I++FV  +P  K NEE+VFLSSK+GDLRD   T+AIFEKYKPTHVIHLAA+V
Sbjct:    4 KSVTMVTGGSGLVGSAIRDFVEANP--KENEEWVFLSSKDGDLRDRKATEAIFEKYKPTHVIHLAAKV 69
[Close]
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.610e-17
Identity = 44/64 (68.75%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  105 MVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            MVTGGTGLVG GI+E+V+ DP A+  EEY+FLSSK+G+L +MA+ +AIFEK+ PTHVIHLAA+V
Sbjct:    1 MVTGGTGLVGQGIEEWVSTDPTAQAEEEYIFLSSKDGNLLNMAECRAIFEKHAPTHVIHLAAKV 64
[Close]
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: A0A7S2DYU3_9STRA (GDP-L-fucose synthase n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DYU3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.660e-17
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 3 
Query:   99 VVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            VVMVTGG+GLVG  I+ FV ++  AK NE +VFLSSK+GDLRD   T AIFEKYKPTHVIHLAA+V
Sbjct:   21 VVMVTGGSGLVGKAIEMFVKDEKNAKPNETWVFLSSKDGDLRDRKATDAIFEKYKPTHVIHLAAKV 86
[Close]
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Match: UPI000644A6AA (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A6AA)

HSP 1 Score: 92.0 bits (227), Expect = 9.280e-17
Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 3 
Query:   90 SKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKEGDLRDMAQTKAIFEKYKPTHVIHLAARV 296
            ++KVVMVTGGTGLVG GI+ ++    +A+ +E++V+L S +GDLR + QT+AIF KYKPTHVIHLAARV
Sbjct:    3 AQKVVMVTGGTGLVGKGIEAYIQQQGDARKDEQWVYLRSADGDLRSLEQTQAIFRKYKPTHVIHLAARV 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16262.3973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6RJN1_SACJA1.410e-2575.95GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2... [more]
A0A7S1UTT3_9STRA1.280e-1971.23GDP-L-fucose synthase n=1 Tax=Grammatophora oceani... [more]
W7TZW1_9STRA3.850e-1861.73GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A6T7DWV8_9STRA5.660e-1864.29GDP-L-fucose synthase n=1 Tax=Florenciella parvula... [more]
A0A4Q2DQ45_9AGAR6.490e-1860.53Epimerase domain-containing protein n=1 Tax=Candol... [more]
A0A6S7GHY1_PARCT1.920e-1766.18GDP-L-fucose synthase-like n=1 Tax=Paramuricea cla... [more]
A0A7S3PXQ5_9STRA2.710e-1770.59GDP-L-fucose synthase n=1 Tax=Chaetoceros debilis ... [more]
A0A836C923_9STRA3.610e-1768.75GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2DYU3_9STRA4.660e-1771.21GDP-L-fucose synthase n=4 Tax=Lithodesmiaceae TaxI... [more]
UPI000644A6AA9.280e-1762.32hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16262contigH-elongata_contig16262:5250..7662 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue4e-23
Seed eggNOG ortholog2880.D7FW27
Preferred nameTSTA3
KEGG rclassRC01014
KEGG koko:K02377,ko:K12812
KEGG ReactionR05692
KEGG Pathwayko00051,ko00520,ko01100,ko03013,ko03015,ko03040,ko05164,map00051,map00520,map01100,map03013,map03015,map03040,map05164
KEGG ModuleM00406,M00430
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006139,GO:0006403,GO:0006725,GO:0006793,GO:0006807,GO:0006810,GO:0007155,GO:0007159,GO:0008150,GO:0008152,GO:0009055,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0015931,GO:0016491,GO:0016614,GO:0016616,GO:0016853,GO:0016854,GO:0016857,GO:0018130,GO:0019438,GO:0019673,GO:0019835,GO:0022610,GO:0022900,GO:0033036,GO:0033227,GO:0034641,GO:0034654,GO:0042350,GO:0042351,GO:0042356,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046368,GO:0046483,GO:0047918,GO:0050577,GO:0050657,GO:0050658,GO:0051179,GO:0051234,GO:0051236,GO:0055086,GO:0055114,GO:0071702,GO:0071704,GO:0071705,GO:0098609,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576
EggNOG free text desc.GDP-L-fucose synthase activity
EggNOG OGsCOG0451@1,KOG1431@2759
Ec32 ortholog descriptionGDP-4-keto-6-deoxy-D-mannose epimerase-reductase
Ec32 orthologEc-01_003130.1
EC1.1.1.271,3.6.4.13
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03041
Hectar predicted targeting categoryother localisation
Exons5
Model size1678
Cds size297
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929951.2211094-UTR-H-elongata_contig16262:5249..53021622929951.2211094-UTR-H-elongata_contig16262:5249..5302Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 5250..5302 +
1691679220.5449755-UTR-H-elongata_contig16262:5249..53021691679220.5449755-UTR-H-elongata_contig16262:5249..5302Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 5250..5302 +
1622929951.2319598-UTR-H-elongata_contig16262:5543..55521622929951.2319598-UTR-H-elongata_contig16262:5543..5552Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 5544..5552 +
1691679220.5600092-UTR-H-elongata_contig16262:5543..55521691679220.5600092-UTR-H-elongata_contig16262:5543..5552Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 5544..5552 +
1622929951.2744203-UTR-H-elongata_contig16262:6305..70931622929951.2744203-UTR-H-elongata_contig16262:6305..7093Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 6306..7093 +
1691679220.5903478-UTR-H-elongata_contig16262:6305..70931691679220.5903478-UTR-H-elongata_contig16262:6305..7093Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 6306..7093 +
1622929951.2849817-UTR-H-elongata_contig16262:7109..74521622929951.2849817-UTR-H-elongata_contig16262:7109..7452Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 7110..7452 +
1691679220.6029732-UTR-H-elongata_contig16262:7109..74521691679220.6029732-UTR-H-elongata_contig16262:7109..7452Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 7110..7452 +
1622929951.2956731-UTR-H-elongata_contig16262:7474..76621622929951.2956731-UTR-H-elongata_contig16262:7474..7662Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 7475..7662 +
1691679220.6108465-UTR-H-elongata_contig16262:7474..76621691679220.6108465-UTR-H-elongata_contig16262:7474..7662Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16262 7475..7662 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929951.2448454-CDS-H-elongata_contig16262:5552..56601622929951.2448454-CDS-H-elongata_contig16262:5552..5660Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16262 5553..5660 +
1691679220.569482-CDS-H-elongata_contig16262:5552..56601691679220.569482-CDS-H-elongata_contig16262:5552..5660Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16262 5553..5660 +
1622929951.2617655-CDS-H-elongata_contig16262:6116..63051622929951.2617655-CDS-H-elongata_contig16262:6116..6305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16262 6117..6305 +
1691679220.5805814-CDS-H-elongata_contig16262:6116..63051691679220.5805814-CDS-H-elongata_contig16262:6116..6305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16262 6117..6305 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16262.3973.1prot_H-elongata_contig16262.3973.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16262 5553..6305 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16262.3973.1

>prot_H-elongata_contig16262.3973.1 ID=prot_H-elongata_contig16262.3973.1|Name=mRNA_H-elongata_contig16262.3973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MSNTQGDAQSKKVVMVTGGTGLVGVGIKEFVTNDPEAKMNEEYVFLSSKE
GDLRDMAQTKAIFEKYKPTHVIHLAARVRENAQFVQCDNISWLDEISR*
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mRNA from alignment at H-elongata_contig16262:5250..7662+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16262.3973.1 ID=mRNA_H-elongata_contig16262.3973.1|Name=mRNA_H-elongata_contig16262.3973.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2413bp|location=Sequence derived from alignment at H-elongata_contig16262:5250..7662+ (Himanthalia elongata Himel1 dioecious)
CTACAACCTTCCATACTTCATTGTGAACCGAGATCGCTATCTCCTATTAA
CAGGTAAGGATGCCGGGATGAATGTATCAGTGCATACCCAACCCATATTT
ACGTTCATGGTCGAGAATGTCTGCGAGGGCAAGGAGGAGGGAATCATCGC
TCTGAAAACCTTCTTCGATTCGGACATCACAGAACATCGCCGGAAGAAAG
AACTTCTCTGACAACAGTTTTATGGTAAAAAATAAAAACAGCAGCATCCA
ATACAGGTATTGCCTTTTCGTCGAACCCTTTCCACTTTCAGCAGGATTTC
GATATGTCTAACACCCAAGGAGATGCGCAATCCAAGAAGGTGGTGATGGT
GACCGGAGGCACTGGTCTTGTGGGCGTCGGGATCAAGGAGTTCGTGACGA
ACGACCCCGAGGTACGAAACACCTGCATTCGAAAAATAGAACAATCAAAT
CTGCGGCCCATTTCGTGCGGCGGCGGCAGTTCCATCTCATCAACTCCGTT
GAAGGGCAGGAAACTGCCACTTCTAGTCAACAGGATTCGAATGGCGTGTA
ATGGATGGGGCATGTCCGTTCTACTATCCACTCTTTCGACTCACCCTGCC
TTGTTATATCATAGAGAACGGTGACACCATAACAGGTTCTCTTTTTCGTT
TTCGTTTTCGTTTTCTTGAAAACTCTGAATTCTTAATCAAACCCTCCGAT
CATTCACAATCTTATTTGCTCCGATTGACTCTTCAAATACCGTCGTCTCC
CACGCAGCTTTTCCAACACAACACCCATCGATTTCATCGCATGATTTGAT
GTCGCCGGACGCCGTTTAACTCCCAAACAATCGATGACATATCGATTCAA
TTCCACCTTACTCTCAGGCGAAAATGAACGAGGAGTACGTGTTCCTCTCC
AGCAAGGAAGGCGACCTAAGGGACATGGCCCAAACAAAGGCCATCTTCGA
GAAATACAAGCCGACGCACGTGATCCACCTTGCCGCACGGGTGAGGGAAA
ATGCCCAGTTTGTTCAGTGTGATAACATAAGTTGGCTCGATGAAATATCT
CGGTAGTAGTGCACAAAACACAACTGGTCAAGGCCTGTATATGCCCACTT
GGAATAAAGGATTCGGTAGCAAGGACAACCACACGCTGAAGAGGGGAAAA
TATAATATGCATATATATACTCTTAAAAGTTAATGTAGCCGTAGTGGGTT
GTTATTTGTTATTTGTTATTTGTTACTTGTTACCCCTTTCTTCGAATTAA
ATCCGAAATACGACAGGGTTGTGAAAACATTGGATTGGCCTATCTATCCT
ACTCGCGTTGGGAAAAGACGGAACACAAAGTAAATAATGTGTGGGTGGAT
TTTTCAAAGAAAAAACATACAGTATGATACGCGCTCATCAGCAAAAACGC
AAAAACCCCCAAGATGCGGGAGAATTCATTTTTTCTTTTTTCTTTATAAA
AAACTAAACTAATTCAAACCCTCGGAACATCCACACACCTTTGCACCGGT
ACTGTACCGGTTTCGGTAAGCATACTAATATTAAGAGTAAACATTTATTT
CGTGTGACTGATACTGTTCATCTCCCAGGTACAAAACCGAAGTCAAATAA
TCCCTGCGATTATCCTCCTTTTTAACCCCTATGGAACTCGATCTGTTTTT
TTACATACTAAATTGAATATAAAATTTGAAATCCAGTTCCTGAAGGGTTA
AAAAAGGAAAAGTCGTGGGGACTACAGCTCCAAAAGGCTAACGCTTTCAT
ACGCTTTAAAATTCGAAAGCACCATACCACCCAGTGCTATACAGTGCTAT
ATAGTGCTGTACTAAACTGTTATATTTAAATAAAAATAATATAATGGACG
ATTAATAAATTAGCTTTTTCTCCGAGGTTGCCCTTGGTCTTTGTCAACAT
CGTCCTGCAGCAAGCACCAAGTCAAAGTATATTGGGGAGAAAAAGCCCTT
CGTGGTGCTGTACACTTCAAAACACCGTAACCCTCAAGGGGCAAACATCA
AAATTTCGTTGGTAAAGGTGTTCGATCACCATGATTGGGGTTTCTGAAAG
AGTAACTTAAGAGGCGGGTTTCTCAAAACACAGGAGAATTTTATTTTAGA
TAATACTGTCGAGTGAATAGCTCCATGCTACCCAGACCCCGCCCTTGAAT
CCCTTAATTCGACCTTAATTCGACGGGAGTGAACCGAGTAGAGACTGCTG
GTATAGAAAGCTTTACTGTTGGTGGCTGGGGTGATGACGAATCTAACATG
GCTGAATAGCATGCGGCTAATACTATTATTAGTACTATTAATCCCTCATG
GGAGATAAAAAACAAACAAAGAAAAACGCGCCGCCATAGTTGATGGTGCA
GTTACAGGTCAACTTTTCGTCGAAGGGAATTACATTATTAAAGTCAAGTC
ACCACTGTCTCTA
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Coding sequence (CDS) from alignment at H-elongata_contig16262:5250..7662+

>mRNA_H-elongata_contig16262.3973.1 ID=mRNA_H-elongata_contig16262.3973.1|Name=mRNA_H-elongata_contig16262.3973.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at H-elongata_contig16262:5250..7662+ (Himanthalia elongata Himel1 dioecious)
ATGTCTAACACCCAAGGAGATGCGCAATCCAAGAAGGTGGTGATGGTGAC
CGGAGGCACTGGTCTTGTGGGCGTCGGGATCAAGGAGTTCGTGACGAACG
ACCCCGAGATGTCTAACACCCAAGGAGATGCGCAATCCAAGAAGGTGGTG
ATGGTGACCGGAGGCACTGGTCTTGTGGGCGTCGGGATCAAGGAGTTCGT
GACGAACGACCCCGAGGCGAAAATGAACGAGGAGTACGTGTTCCTCTCCA
GCAAGGAAGGCGACCTAAGGGACATGGCCCAAACAAAGGCCATCTTCGAG
AAATACAAGCCGACGCACGTGATCCACCTTGCCGCACGGGTGAGGGAAAA
TGCCCAGTTTGTTCAGTGTGATAACATAAGTTGGCTCGATGAAATATCTC
GGTAGGCGAAAATGAACGAGGAGTACGTGTTCCTCTCCAGCAAGGAAGGC
GACCTAAGGGACATGGCCCAAACAAAGGCCATCTTCGAGAAATACAAGCC
GACGCACGTGATCCACCTTGCCGCACGGGTGAGGGAAAATGCCCAGTTTG
TTCAGTGTGATAACATAAGTTGGCTCGATGAAATATCTCGGTAG
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