mRNA_H-elongata_contig16258.3972.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16258.3972.1
Unique NamemRNA_H-elongata_contig16258.3972.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16258.3972.1 vs. uniprot
Match: D8LIX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX1_ECTSI)

HSP 1 Score: 515 bits (1327), Expect = 2.960e-170
Identity = 321/662 (48.49%), Postives = 404/662 (61.03%), Query Frame = 1
Query:   10 QDLGRLEHLMLTTPTPVLEVDFFKDGAALMMPPLSAAAIGDNSARELEHQQXXXXXXQPKQRPLLLPVQRSGRADAIAVWFDLWLDEERGEPDVVSTRQGRRAAAPGDASGWDVGIYFASGTPLLEGTEVALEASAGRDRLRLALNGQEG------AAVQTPA--VDVGEVSRKTVDGDRSSSISASIGAEKGGDLVGVRGPCLVGEMDMARLNDDSFHKAHADAVARALVAQGMRIKMP----QSSAHHALPTPSPKPETLTTPPPARVLDLCSSWGLAGLLVARLER-CDGEPATRVLAVVENPQAAAVLNALAKENGLGPDRYLASADPLVDVASLHRGAVATVESGEPGNHRAPHDSDNRVVAAGSCTTDRYGPGYREPSMWSVIMASSLVEGSGLLRQGGLQDLEFCRRFMCD-NDGDDHGRRSASASETAFVPGSIAVVCRGLQRASLLAENRVRPECCAGVDVSPVNSFGVANFRELDLSGAAEPQNGRLGTTEDREVAEEEDHHRGGRPGAKKGS-------PSGFPREEEDETFLTAPLVCYELELANARAGRDGCLQRRTTRLYVQRDGILHAVAYWYLQRLGG-VEIDTGPCGTSRGDRAGRPSTRSQSHFRQAAVLLDHPAVVREGQTIDLSVFCHTSQGVVVQVVGISD 1929
            +DLGRLEH +LT+P PVLEVDF +DGA LM    + +  G  +A  +           P      L V+ SGRADA+AVWFDLWLD+ERGE DVVSTR G+  +APGDASGWD GIYFA G  L EG+E +L AS+  DRL   +NGQEG       A +TP+  +D G   R   +G   ++ +++             GP  +GEMDMARLND  FH + A AVA ALVAQGM I +P    Q     ++ + S  P    +PPPA VLDLC +WG+AGLLVA +ER  DG PATRVLAV E+ ++AA+LNA+A+ENGLGPDRY+A+AD LVD+AS  RG V    + +  + RA   +      +G        P       W+V+M SS+VE SGLL+QGGL  LE CR  + D N+    GR   + S TAFVPG + VVC+GLQRASLL+ENRV+ + C GV V PVN+F VA FRELDLS AA       G +E    A   +   GG   A+  +         G   EEE E FLT   VCYEL+LAN +AG DGCL +R+  L VQR G LHA+AYWY Q LG  V +DT P G             + SHFRQAAVLL+ P  V+ GQ ID+ VFC+TS+GVVVQV+G+++
Sbjct:  191 EDLGRLEHRLLTSPQPVLEVDFLRDGADLMARSATCSPQGVPAAPGMP----------PPSAIANLAVKCSGRADAVAVWFDLWLDKERGERDVVSTRPGQ--SAPGDASGWDAGIYFAHGANLNEGSEASLGASSRVDRLCFTVNGQEGLLHNSVVAAETPSEVIDRGIGDRTVGEGSLRTAYNSN-------------GPVYLGEMDMARLNDGPFHSSQAKAVAEALVAQGMEISIPAATRQGPRSSSVASSSQTP-AFHSPPPAFVLDLCGAWGVAGLLVANMERSADGAPATRVLAVAESEESAAILNAIARENGLGPDRYVATADGLVDLAS--RGGVFETTTAKGADERASSMATREQRDSG-------WPARGSDLGWAVVMTSSVVEASGLLKQGGLGGLELCRHLVSDGNNRSSGGRDGRNTSPTAFVPGRLEVVCQGLQRASLLSENRVQSDNCCGVIVDPVNAFSVATFRELDLSAAAP-----CGHSEGSTPAARNEKTTGGGVDAESSTRCVPTDGEKGKGHEEEQEIFLTPSAVCYELDLANVQAGPDGCLDKRSASLVVQRSGTLHAIAYWYRQTLGATVVLDTQPSGNPE-------CISASSHFRQAAVLLEKPIEVKAGQCIDMCVFCNTSKGVVVQVLGVTE 805          
BLAST of mRNA_H-elongata_contig16258.3972.1 vs. uniprot
Match: A0A6H5L3V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V3_9PHAE)

HSP 1 Score: 514 bits (1324), Expect = 6.980e-170
Identity = 322/665 (48.42%), Postives = 401/665 (60.30%), Query Frame = 1
Query:   13 DLGRLEHLMLTTPTPVLEVDFFKDGAALMMPPLSAAAIGDNSARELEHQQXXXXXXQPKQRPLLLPVQRSGRADAIAVWFDLWLDEERGEPDVVSTRQGRRAAAPGDASGWDVGIYFASGTPLLEGTEVALEASAGRDRLRLALNGQEG------AAVQTPA--VDVGEVSRKTVDGDRSSSISASIGAEKGGDLVGVRGPCLVGEMDMARLNDDSFHKAHADAVARALVAQGMRIKMP--------QSSAHHALPTPSPKPETLTTPPPARVLDLCSSWGLAGLLVARLER-CDGEPATRVLAVVENPQAAAVLNALAKENGLGPDRYLASADPLVDVASLHRGAVATVESGEPGNHRAPHDSDNRVVAAGSCTTDRYGPGYREPSMWSVIMASSLVEGSGLLRQGGLQDLEFCRRFMCD-NDGDDHGRRSASASETAFVPGSIAVVCRGLQRASLLAENRVRPECCAGVDVSPVNSFGVANFRELDLSGAAEPQNGRLGTTEDREVAEEEDHHRGGRPGAKKGS-------PSGFPREEEDETFLTAPLVCYELELANARAGRDGCLQRRTTRLYVQRDGILHAVAYWYLQRLGG-VEIDTGPCGTSRGDRAGRPSTRSQSHFRQAAVLLDHPAVVREGQTIDLSVFCHTSQGVVVQVVGISD 1929
            DLGRLEH +LT+P PVLEVDF KDGA L+    + +  G  +A  +           P      L V+ SGRADA+AVWFDLWLD+ERGE DVVSTR GR  +APGDASGWD GIYFA G  L EG+E +L AS+  DRL   +NGQ G       A + P+  +D G   R   +G+  ++ +++             GP  +GEMDMARLND  FH + A AVA ALVAQGM I MP         SS   +  TP+       +PPPA VLDLC +WG+AGLLVA +ER  DG PATRVLAV E+ ++AA+LN +A+ENGLGPDRY+A+AD LVD+AS  RG V    + +  N RA   +       G        PG      W+V+M SS+VE SGLL+QGGL  LE CR F+   N+G   GR   S + TAFVPG + VVC+GLQRASLL+ENRV+ + C GV V PVN+F VA FRELDLS  A       G +E        +   GG   A++ +         G   EEE E FLT   VCYEL+LAN +AG DGCL +R+  L  QR G LHA+AYWY Q LG  V +DT P G S           + SHFRQAAVLL+ P  V+ GQ ID+ VFC+TS+GVVVQV+G+++
Sbjct:  186 DLGRLEHRLLTSPQPVLEVDFLKDGADLLARAATCSPQGVPAALGMP----------PPSAIANLAVKCSGRADAVAVWFDLWLDKERGERDVVSTRPGR--SAPGDASGWDAGIYFAHGANLTEGSEASLGASSRVDRLCFTVNGQGGLFHHSVVAAEPPSEVIDRGIGDRTVGEGNLRTAYNSN-------------GPVYLGEMDMARLNDGPFHSSQAKAVAEALVAQGMEISMPAAARQGPRSSSVASSSQTPAHH-----SPPPAFVLDLCGAWGVAGLLVANMERSADGTPATRVLAVAESEESAAILNTIARENGLGPDRYVATADGLVDLAS--RGGVFETPTAKGANERASSMATREQWDIG-------WPGRGSDLGWAVVMTSSVVEASGLLKQGGLGGLELCRHFVSGGNNGSSGGRDDRSTAPTAFVPGRLEVVCQGLQRASLLSENRVQSDNCCGVIVDPVNAFSVATFRELDLSATAP-----CGHSEGSTPTARNERTTGGGVDAERSTRCVPTDGEKGKGHEEEQEMFLTPSAVCYELDLANVQAGPDGCLDKRSASLVAQRSGTLHAIAYWYRQTLGATVVLDTQPRGHSE-------CISASSHFRQAAVLLEKPIEVKTGQCIDMCVFCNTSKGVVVQVLGVTE 799          
BLAST of mRNA_H-elongata_contig16258.3972.1 vs. uniprot
Match: A0A835YS96_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS96_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.260e-12
Identity = 153/630 (24.29%), Postives = 219/630 (34.76%), Query Frame = 1
Query:    1 YLFQDLGRLEHLMLTTPTPVLEVDFFKDGAALMMPPLSAAAIGDNSARELEHQQXXXXXXQPKQRPLLLPVQRSGRADAIAVWFDLWLDEERGEPDVVSTRQGRRAAAPGDASGWDVGIYFASGTPLLE-GTEVALEASAGRDRLRLALNGQEGAAVQTPAVDVGEVSRKTVDGDRSSSISASIGAEKGGDLVGVRGPCLVGEMDMARLNDDSFHKAHADAVARALVAQGMRIKMPQSSAHHALPTPSPKPETLTTPPPARVLDLCSSWGLAGLLVARLERCDGEPATRVLAV-VENPQAAAVLNALAKENGLGPDRYLASADPLVDVASLHRGAVATVESGEPGNHRAPHDSDNRVVAAGSCTTDRYGPGYREPSMWSVIMASSLVEGSGLLRQGGLQDLEFCRRFMCDNDGDDHGRRSASASETAFVPGSIAVVCRGLQRASLLAENRVRPECCAGVDVSPVNSFGVANFRELDLSGAAEPQNGRLGTTEDREVAEEEDHHRGGRPGAKKGSPSGFPREEEDETFLTAPLVCYEL-ELANARAGRDGCLQRRTTRLYVQRDGILHAVAYWYLQRLG---GVEIDTGPCGTSRGDRAGRPSTRSQSHFRQAAVLLDHPAVVREGQTIDL 1872
            Y  + L  L H  LT PT  L + F              A + DN +                   + LPV  SG  DAIAVWFD+ LD   G   V +      ++A    SGWD  ++F      ++ G  V L  +     LR  L+  E  A+ TP          T     S  + A++   +            +GEMD+AR ND+    A   A+A A+            S H                    VLDL   W ++    A   R  G  A  V      + Q A + N L ++      R    A P      +H                                 D  G   +E +    ++ + LVEGSGLLRQG L+DL   RR +C        R S  A  T  VP S+ ++ +G     L  + RV  +    +DVS +N+FGV  F E+ LS                                               T LT+    ++L  +   +A  D  +      L     G ++AV +WY   L      E+ +    +SR   AG P     ++FRQAA LL  P  V  GQ +++
Sbjct:  308 YTCERLQDLHHTPLTAPTQALSIQFL-------------APLPDNPSI------------------VCLPVTASGTVDAIAVWFDMDLD---GHTSVTTAPDD--SSAQHRCSGWDQALFFVKADWRVQRGELVHLPCTYTDSSLRFPLH--EPTALSTPLA-------ATATAGTSPVLPAALPTYR------------LGEMDVARFNDERCCAASGRAIAAAVAG----------SKH--------------------VLDLSGGWWMS--FTASTARACGASAVEVACTGAADEQVACLKNVLQQQE----QRAALGAAPCA--VRVH---------------------------------DDIGSALQEAATSVEVVVTELVEGSGLLRQGALEDLLHARR-VCS-------RGSGRACVT--VPCSLRMMVQGYSCGGLEEQRRVLADRTVDIDVSALNAFGVNVFGEMCLS---------------------------------------------QHTALTSVEASHDLLAVGGDQADSDAFIV-----LACSVSGTMNAVGFWYEMGLTPGEDGEVYSTYTYSSRHVDAGLP--HDFTYFRQAAYLLTEPIDVVLGQQVEV 747          
BLAST of mRNA_H-elongata_contig16258.3972.1 vs. uniprot
Match: UPI001C097ACB (protein arginine N-methyltransferase 9 n=2 Tax=Alosa TaxID=34772 RepID=UPI001C097ACB)

HSP 1 Score: 62.0 bits (149), Expect = 3.210e-6
Identity = 137/582 (23.54%), Postives = 211/582 (36.25%), Query Frame = 1
Query:  199 LLLPVQRSGRADAIAVWFDLWLDEERGEPDVVSTRQGRRAAAPGDASGWDVGIYFASGTP---LLEGTEVALEASAGRDRLRLALNG--QEGAAVQTPAVDVGEVSRKTVDGDRSSSISASIGAEKGGDLVGVRGPC---LVGEMDMARLNDDSFHKAHADAVARALVAQGMRIKMPQSSAHHALPTPSPKPETLTTPPPARVLDLCSSWGLAGLLVARL--ERCDGEPA----TRVLAVVENPQAAAVLNALAKENGLGPDRYLASADPLVDVASLHRGAVATVESGEPGNHRAPHDSDNRVVAAGSCTTDRYGPGYREPSMWSVIMASSLVEGSGLLRQGGLQDLEFCRRFMCDNDGDDHGRRSASASETAFVPGSIAVVCRGLQRASLLAENRVRP-ECCAGVDVSP-VNSFGVANFRELDLSGAAEPQNGRLGTTEDREVAEEEDHHRGGRPGAKKGSPSGFPREEEDETFLTAPLVCYELELANARAGRDGCLQRRTTRLYVQRDGILHAVAYWYLQRLGGVEIDTGPCGTSRGDRAGRPSTRSQ-SHFRQAAVLLDHPAVVREGQTIDLSVFCHTS 1893
            L L V + G  DA+AVWF L LDEE      +ST       AP + + W+  IY   G     +  G  + +E S     LRL      ++G  ++  + + G+V       D +S+    + +   G      GP    ++   ++A LN+  +H+    A+ + L     R+K  +S +          P T     P  VLD+   + L  L+ A+L     DG  +     R  + VE  Q   +L  LA+ NG             V V +L                   H  D+  V     TT++         +WS I+    VE  GLLRQ  ++     R  +     +D GR           P  I +    ++   LL E+ V+  E   G +++P +N F V     LDLS                                             + T+L+ P   + L+L N           R   + V   G + A+ +WY   L               D     ST SQ SH++QAAV+L  P  V  G T+ L++  H S
Sbjct:  399 LSLTVTQEGVLDALAVWFQLHLDEENS----LST-------APQEKTCWEQAIYPIQGPQDCAVKPGDRLLVEVSCKDAYLRLCCVAVVRDGCVLRLDSWEGGDVWGS----DSASNPEVELCSALAGLQTDPEGPLEAFMLECSELALLNNTHYHQNFQAAMNKLLT----RLKETRSGS----------PVTAEGSEPLYVLDVSEGFSLISLIAAQLGLHLADGSESGCGLVRAYSSVEKEQHQTILRLLAQGNG-------------VPVGALE--------------FWLNHVEDDSAVLQRP-TTEK---------LWSAIVLDC-VETCGLLRQKLMEKATLARCLL-----EDGGR---------IFPERIVIYGLLVESDMLLQESAVQGREPTLGFNIAPFINQFTVPIHVFLDLSTL-------------------------------------------ECTYLSEPAELFTLDLMNTHNNYPA----REIMVRVTASGRVTAIPFWYQIHL---------------DEEWSVSTFSQESHWKQAAVVLQDPLCVTAGDTVRLTIQLHKS 837          
BLAST of mRNA_H-elongata_contig16258.3972.1 vs. uniprot
Match: A0A6G1PC23_9TELE (Protein arginine N-methyltransferase 9 Protein arginine N-methyltransferase 10 n=1 Tax=Channa argus TaxID=215402 RepID=A0A6G1PC23_9TELE)

HSP 1 Score: 57.4 bits (137), Expect = 8.430e-5
Identity = 144/607 (23.72%), Postives = 225/607 (37.07%), Query Frame = 1
Query:  106 PLSAAAIGDNSARELEHQQXXXXXXQPKQRPLLLPVQRSGRADAIAVWFDLWLDEERGEPDVVSTRQGRRAAAPGDASGWDVGIYFA---SGTPLLEGTEVALEASAGRDRLRLALNG--QEGAAVQTPAVDVGEVSRKTVDGDRSSSISASIGAEKGGDLVGVRGPCLVGEMDMARLNDDSFHKAHADAVARALVAQGMRIKMPQSSAHHALPTPSPKPETLTTPPPARVLDLCSSWGLAGLLVARLERCDGEPATRVLAVVENPQAAAVLNALAKENGLGPDRYLASADPLVDVASLHRGAVATVESGEPGNHRAPHDSDNRVVAAGSCTTDRYGPGYREPS---MWSVIMASSLVEGSGLLRQGGLQDLEFCRRFMCDNDGDDHGRRSASASETAFVPGSIAVVCRGLQRASLLAENRVR-PECCAGVDVSP-VNSFGVANFRELDLSGAAEPQNGRLGTTEDREVAEEEDHHRGGRPGAKKGSPSGFPREEEDETFLTAPLVCYELELANARAGRDGCLQRRTTRLYVQRDGILHAVAYWYLQRLGGVEIDTGPCGTSRGDRAGRPSTRSQ-SHFRQAAVLLDHPAVVREGQTIDLSVFCHTS 1893
            P +A  I  N+ +ELE           + + + LPV + G  DA+AVWF L LDEE      +ST        P + + W+  IY A    G  L    E+ +E S     LRL      ++G  +        + S+  V      +   S  A    D    +  C++   +MA LN+  +H++   A+ + L++Q +++K  Q+  H A     P            VLD+   + L  L+ A       +   +  + VE  +   VL  LAK N + P+ YL           L+R                              T D  G   + PS   +WS I+    VE  GL+RQ  ++     R  +     ++ GR           P  I V    ++  +LL E+ V+  E   G +++P +N F V     LD S           T E R ++E+                                +  + L+L NA A        R  ++     G + A+ +WY   L               D+    ST SQ SH+RQAAV+L  P  V+ G  + L+V  H S
Sbjct:  374 PFTALNIDFNNLKELE------GLSSREVQQIRLPVTQEGELDALAVWFQLHLDEESS----LST-------GPHENTCWEQAIYPAHCVKGFVLKPQDELVVEVSCRDAFLRLCTVAVVRDGREICLDKHVNEQHSKNPVSSPNPEAELCSALACLQTDQNKAKDFCMLECAEMALLNNSVYHQSFCSALVK-LISQ-LKVKC-QNREHVAGVESDPTDPATDCSHLLYVLDVSEGFSLLSLIAA------SQGNVKAYSSVEKNKQQEVLKRLAKSNSV-PEHYLEF--------WLNR------------------------------TEDEQGM-LQRPSREKLWSAIILDC-VETCGLIRQRLMEKASLARCLL-----EEGGR---------IFPERIVVYGMLVESDTLLLESAVQGQEPTLGFNIAPFINQFTVPVHVFLDFS-----------TLECRHLSED--------------------------------VELFVLDLMNANAN----YIHREVKVQATSTGRVTAIPFWYHIFL---------------DQEISVSTLSQNSHWRQAAVVLQQPLEVQAGDWVRLAVKLHKS 837          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16258.3972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LIX1_ECTSI2.960e-17048.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3V3_9PHAE6.980e-17048.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YS96_9STRA5.260e-1224.29S-adenosyl-L-methionine-dependent methyltransferas... [more]
UPI001C097ACB3.210e-623.54protein arginine N-methyltransferase 9 n=2 Tax=Alo... [more]
A0A6G1PC23_9TELE8.430e-523.72Protein arginine N-methyltransferase 9 Protein arg... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16258contigH-elongata_contig16258:5142..7412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score519.6
Seed ortholog evalue2.1e-144
Seed eggNOG ortholog2880.D8LIX1
Preferred namePRMT9
KEGG rclassRC00003,RC02120,RC03389,RC03391
KEGG koko:K19737
KEGG ReactionR11216,R11218,R11220
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016273,GO:0016274,GO:0016740,GO:0016741,GO:0018193,GO:0018195,GO:0018216,GO:0019538,GO:0019918,GO:0032259,GO:0034641,GO:0035243,GO:0035246,GO:0035247,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564
EggNOG free text desc.peptidyl-arginine methylation, to symmetrical-dimethyl arginine
EggNOG OGsCOG0500@1,KOG1501@2759
EC2.1.1.320
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Exons2
Model size1950
Cds size1950
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929951.144071-CDS-H-elongata_contig16258:5141..67461622929951.144071-CDS-H-elongata_contig16258:5141..6746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16258 5142..6746 -
1691679220.508753-CDS-H-elongata_contig16258:5141..67461691679220.508753-CDS-H-elongata_contig16258:5141..6746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16258 5142..6746 -
1622929951.1767051-CDS-H-elongata_contig16258:7067..74121622929951.1767051-CDS-H-elongata_contig16258:7067..7412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16258 7068..7412 -
1691679220.52623-CDS-H-elongata_contig16258:7067..74121691679220.52623-CDS-H-elongata_contig16258:7067..7412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16258 7068..7412 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16258.3972.1prot_H-elongata_contig16258.3972.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16258 5142..7412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16258.3972.1

>prot_H-elongata_contig16258.3972.1 ID=prot_H-elongata_contig16258.3972.1|Name=mRNA_H-elongata_contig16258.3972.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=650bp
YLFQDLGRLEHLMLTTPTPVLEVDFFKDGAALMMPPLSAAAIGDNSAREL
EHQQKDEEEEQPKQRPLLLPVQRSGRADAIAVWFDLWLDEERGEPDVVST
RQGRRAAAPGDASGWDVGIYFASGTPLLEGTEVALEASAGRDRLRLALNG
QEGAAVQTPAVDVGEVSRKTVDGDRSSSISASIGAEKGGDLVGVRGPCLV
GEMDMARLNDDSFHKAHADAVARALVAQGMRIKMPQSSAHHALPTPSPKP
ETLTTPPPARVLDLCSSWGLAGLLVARLERCDGEPATRVLAVVENPQAAA
VLNALAKENGLGPDRYLASADPLVDVASLHRGAVATVESGEPGNHRAPHD
SDNRVVAAGSCTTDRYGPGYREPSMWSVIMASSLVEGSGLLRQGGLQDLE
FCRRFMCDNDGDDHGRRSASASETAFVPGSIAVVCRGLQRASLLAENRVR
PECCAGVDVSPVNSFGVANFRELDLSGAAEPQNGRLGTTEDREVAEEEDH
HRGGRPGAKKGSPSGFPREEEDETFLTAPLVCYELELANARAGRDGCLQR
RTTRLYVQRDGILHAVAYWYLQRLGGVEIDTGPCGTSRGDRAGRPSTRSQ
SHFRQAAVLLDHPAVVREGQTIDLSVFCHTSQGVVVQVVGISDPPQLVV*
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mRNA from alignment at H-elongata_contig16258:5142..7412-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16258.3972.1 ID=mRNA_H-elongata_contig16258.3972.1|Name=mRNA_H-elongata_contig16258.3972.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2271bp|location=Sequence derived from alignment at H-elongata_contig16258:5142..7412- (Himanthalia elongata Himel1 dioecious)
TACCTATTCCAGGACCTTGGTCGCCTCGAACACTTGATGCTGACTACTCC GACGCCGGTGCTGGAGGTCGATTTTTTCAAGGACGGCGCGGCTCTTATGA TGCCCCCCCTGTCGGCGGCAGCCATAGGGGACAACAGCGCCCGGGAGCTT GAACATCAGCAGAAGGATGAAGAGGAGGAGCAGCCGAAGCAACGACCCTT GCTCTTACCGGTGCAGCGATCGGGTCGTGCGGACGCTATCGCCGTCTGGT TTGACCTCTGGCTCGACGAGGAGAGGGGGGAGCCTGATGTTGTGAGCACG AGGCAGGGACGTCGCGCTGCTGCACCCGGAGATGCGTCTGGTTGGGTGAG TGGCTCGCCCTCGTGCTTGGCTTTAACTTCGGAATGCACCACCGTTAGCA GTTAAGGGTGACAATCCTATACTGTTGCGCGAACCATCCTTTCTTCGTAG AGTAGACCGTGGAGCTAATGGCAGGAGACCAACTCCGCCTTACGTGCTTC ATACGCCCTGTATCTATGTGTGTGTAATGCGTGGGTATGTGCGTGTGTTT GTGTTTGAGGTTTGTTTCTTTTGCTTGTCGCGCGCCATCCGTCTTAAATA ATTTTGCGCTGACAAATATCCCCCCCTTGCCATCCGTGGCTTGGCGTCAC TGGACGTCCTACGCAGGATGTCGGCATCTACTTCGCGTCGGGAACGCCCT TGCTGGAAGGGACTGAGGTCGCTCTGGAAGCGTCCGCGGGACGAGACAGA CTCCGCCTGGCGTTAAACGGCCAGGAAGGAGCCGCCGTTCAAACCCCGGC GGTTGATGTAGGGGAGGTATCAAGAAAAACGGTAGATGGTGACCGAAGTA GCAGCATCAGCGCTAGTATCGGCGCGGAAAAGGGTGGTGACCTGGTCGGC GTCCGTGGGCCATGCTTGGTGGGGGAGATGGACATGGCTCGCTTGAACGA TGATTCGTTCCATAAAGCACACGCCGACGCCGTGGCGAGAGCTTTGGTCG CGCAAGGAATGCGCATCAAAATGCCCCAGTCTTCGGCGCATCACGCCCTC CCGACCCCCTCCCCAAAGCCAGAGACATTGACCACGCCTCCTCCAGCTCG CGTTCTCGACCTCTGTAGTTCGTGGGGGCTGGCCGGGTTGCTTGTGGCTC GGCTGGAGCGGTGCGATGGCGAGCCTGCGACGAGGGTTCTGGCGGTCGTG GAGAACCCGCAGGCGGCGGCTGTGCTGAACGCTCTCGCGAAGGAAAACGG CCTCGGGCCGGATCGTTACCTGGCCAGCGCAGATCCACTGGTGGATGTGG CTTCTCTGCATCGTGGCGCAGTCGCCACCGTCGAAAGCGGAGAGCCCGGA AATCATCGTGCGCCGCACGACAGCGATAATCGGGTCGTGGCCGCCGGTAG TTGCACGACAGATCGTTACGGGCCTGGATACAGAGAGCCGTCGATGTGGT CGGTGATCATGGCTTCGTCGCTAGTGGAAGGTTCGGGTCTCCTCCGACAG GGGGGCCTCCAAGACCTAGAGTTTTGTCGACGGTTCATGTGTGACAACGA CGGAGATGATCATGGCCGCCGCAGTGCAAGCGCGAGCGAGACGGCTTTTG TCCCCGGTTCAATCGCGGTCGTCTGTCGAGGTCTGCAGCGCGCGTCCCTG TTGGCGGAGAACAGGGTGCGCCCTGAGTGTTGCGCCGGCGTCGACGTCTC CCCGGTGAACTCGTTCGGTGTAGCAAATTTCCGGGAGCTGGACCTCTCGG GCGCCGCCGAACCCCAAAACGGTCGGCTGGGAACAACAGAGGATCGCGAA GTCGCAGAAGAGGAAGATCATCACCGAGGAGGTCGTCCGGGCGCAAAGAA GGGATCTCCGTCGGGATTTCCTCGAGAGGAGGAGGACGAGACGTTTTTGA CGGCGCCCCTCGTGTGCTACGAGCTAGAGCTGGCGAACGCACGCGCGGGA CGAGACGGGTGTCTCCAGCGACGCACCACCCGCCTATACGTTCAGCGGGA TGGAATCCTGCATGCCGTGGCGTATTGGTACCTGCAGCGACTCGGAGGAG TAGAGATTGACACGGGACCTTGCGGCACGAGCCGGGGCGATAGGGCGGGT CGCCCGAGCACGCGGTCTCAGTCTCACTTCAGGCAGGCGGCCGTCCTGCT GGACCACCCAGCTGTTGTGAGAGAAGGGCAAACTATCGACCTAAGCGTGT TTTGCCACACTAGCCAAGGGGTCGTCGTCCAGGTGGTGGGAATCTCGGAC CCGCCGCAGCTTGTTGTGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig16258:5142..7412-

>mRNA_H-elongata_contig16258.3972.1 ID=mRNA_H-elongata_contig16258.3972.1|Name=mRNA_H-elongata_contig16258.3972.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3900bp|location=Sequence derived from alignment at H-elongata_contig16258:5142..7412- (Himanthalia elongata Himel1 dioecious)
TACCTATTCCAGGACCTTGGTCGCCTCGAACACTTGATGCTGACTACTCC
GACGCCGGTGCTGGAGGTCGATTTTTTCAAGGACGGCGCGGCTCTTATGA
TGCCCCCCCTGTCGGCGGCAGCCATAGGGGACAACAGCGCCCGGGAGCTT
GAACATCAGCAGAAGGATGAAGAGGAGGAGCAGCCGAAGCAACGACCCTT
GCTCTTACCGGTGCAGCGATCGGGTCGTGCGGACGCTATCGCCGTCTGGT
TTGACCTCTGGCTCGACGAGGAGAGGGGGGAGCCTGATGTTGTGAGCACG
AGGCAGGGACGTCGCGCTGCTGCACCCGGAGATGCGTCTGGTTGGTACCT
ATTCCAGGACCTTGGTCGCCTCGAACACTTGATGCTGACTACTCCGACGC
CGGTGCTGGAGGTCGATTTTTTCAAGGACGGCGCGGCTCTTATGATGCCC
CCCCTGTCGGCGGCAGCCATAGGGGACAACAGCGCCCGGGAGCTTGAACA
TCAGCAGAAGGATGAAGAGGAGGAGCAGCCGAAGCAACGACCCTTGCTCT
TACCGGTGCAGCGATCGGGTCGTGCGGACGCTATCGCCGTCTGGTTTGAC
CTCTGGCTCGACGAGGAGAGGGGGGAGCCTGATGTTGTGAGCACGAGGCA
GGGACGTCGCGCTGCTGCACCCGGAGATGCGTCTGGTTGGGATGTCGGCA
TCTACTTCGCGTCGGGAACGCCCTTGCTGGAAGGGACTGAGGTCGCTCTG
GAAGCGTCCGCGGGACGAGACAGACTCCGCCTGGCGTTAAACGGCCAGGA
AGGAGCCGCCGTTCAAACCCCGGCGGTTGATGTAGGGGAGGTATCAAGAA
AAACGGTAGATGGTGACCGAAGTAGCAGCATCAGCGCTAGTATCGGCGCG
GAAAAGGGTGGTGACCTGGTCGGCGTCCGTGGGCCATGCTTGGTGGGGGA
GATGGACATGGCTCGCTTGAACGATGATTCGTTCCATAAAGCACACGCCG
ACGCCGTGGCGAGAGCTTTGGTCGCGCAAGGAATGCGCATCAAAATGCCC
CAGTCTTCGGCGCATCACGCCCTCCCGACCCCCTCCCCAAAGCCAGAGAC
ATTGACCACGCCTCCTCCAGCTCGCGTTCTCGACCTCTGTAGTTCGTGGG
GGCTGGCCGGGTTGCTTGTGGCTCGGCTGGAGCGGTGCGATGGCGAGCCT
GCGACGAGGGTTCTGGCGGTCGTGGAGAACCCGCAGGCGGCGGCTGTGCT
GAACGCTCTCGCGAAGGAAAACGGCCTCGGGCCGGATCGTTACCTGGCCA
GCGCAGATCCACTGGTGGATGTGGCTTCTCTGCATCGTGGCGCAGTCGCC
ACCGTCGAAAGCGGAGAGCCCGGAAATCATCGTGCGCCGCACGACAGCGA
TAATCGGGTCGTGGCCGCCGGTAGTTGCACGACAGATCGTTACGGGCCTG
GATACAGAGAGCCGTCGATGTGGTCGGTGATCATGGCTTCGTCGCTAGTG
GAAGGTTCGGGTCTCCTCCGACAGGGGGGCCTCCAAGACCTAGAGTTTTG
TCGACGGTTCATGTGTGACAACGACGGAGATGATCATGGCCGCCGCAGTG
CAAGCGCGAGCGAGACGGCTTTTGTCCCCGGTTCAATCGCGGTCGTCTGT
CGAGGTCTGCAGCGCGCGTCCCTGTTGGCGGAGAACAGGGTGCGCCCTGA
GTGTTGCGCCGGCGTCGACGTCTCCCCGGTGAACTCGTTCGGTGTAGCAA
ATTTCCGGGAGCTGGACCTCTCGGGCGCCGCCGAACCCCAAAACGGTCGG
CTGGGAACAACAGAGGATCGCGAAGTCGCAGAAGAGGAAGATCATCACCG
AGGAGGTCGTCCGGGCGCAAAGAAGGGATCTCCGTCGGGATTTCCTCGAG
AGGAGGAGGACGAGACGTTTTTGACGGCGCCCCTCGTGTGCTACGAGCTA
GAGCTGGCGAACGCACGCGCGGGACGAGACGGGTGTCTCCAGCGACGCAC
CACCCGCCTATACGTTCAGCGGGATGGAATCCTGCATGCCGTGGCGTATT
GGTACCTGCAGCGACTCGGAGGAGTAGAGATTGACACGGGACCTTGCGGC
ACGAGCCGGGGCGATAGGGCGGGTCGCCCGAGCACGCGGTCTCAGTCTCA
CTTCAGGCAGGCGGCCGTCCTGCTGGACCACCCAGCTGTTGTGAGAGAAG
GGCAAACTATCGACCTAAGCGTGTTTTGCCACACTAGCCAAGGGGTCGTC
GTCCAGGTGGTGGGAATCTCGGACCCGCCGCAGCTTGTTGTGTGAGATGT
CGGCATCTACTTCGCGTCGGGAACGCCCTTGCTGGAAGGGACTGAGGTCG
CTCTGGAAGCGTCCGCGGGACGAGACAGACTCCGCCTGGCGTTAAACGGC
CAGGAAGGAGCCGCCGTTCAAACCCCGGCGGTTGATGTAGGGGAGGTATC
AAGAAAAACGGTAGATGGTGACCGAAGTAGCAGCATCAGCGCTAGTATCG
GCGCGGAAAAGGGTGGTGACCTGGTCGGCGTCCGTGGGCCATGCTTGGTG
GGGGAGATGGACATGGCTCGCTTGAACGATGATTCGTTCCATAAAGCACA
CGCCGACGCCGTGGCGAGAGCTTTGGTCGCGCAAGGAATGCGCATCAAAA
TGCCCCAGTCTTCGGCGCATCACGCCCTCCCGACCCCCTCCCCAAAGCCA
GAGACATTGACCACGCCTCCTCCAGCTCGCGTTCTCGACCTCTGTAGTTC
GTGGGGGCTGGCCGGGTTGCTTGTGGCTCGGCTGGAGCGGTGCGATGGCG
AGCCTGCGACGAGGGTTCTGGCGGTCGTGGAGAACCCGCAGGCGGCGGCT
GTGCTGAACGCTCTCGCGAAGGAAAACGGCCTCGGGCCGGATCGTTACCT
GGCCAGCGCAGATCCACTGGTGGATGTGGCTTCTCTGCATCGTGGCGCAG
TCGCCACCGTCGAAAGCGGAGAGCCCGGAAATCATCGTGCGCCGCACGAC
AGCGATAATCGGGTCGTGGCCGCCGGTAGTTGCACGACAGATCGTTACGG
GCCTGGATACAGAGAGCCGTCGATGTGGTCGGTGATCATGGCTTCGTCGC
TAGTGGAAGGTTCGGGTCTCCTCCGACAGGGGGGCCTCCAAGACCTAGAG
TTTTGTCGACGGTTCATGTGTGACAACGACGGAGATGATCATGGCCGCCG
CAGTGCAAGCGCGAGCGAGACGGCTTTTGTCCCCGGTTCAATCGCGGTCG
TCTGTCGAGGTCTGCAGCGCGCGTCCCTGTTGGCGGAGAACAGGGTGCGC
CCTGAGTGTTGCGCCGGCGTCGACGTCTCCCCGGTGAACTCGTTCGGTGT
AGCAAATTTCCGGGAGCTGGACCTCTCGGGCGCCGCCGAACCCCAAAACG
GTCGGCTGGGAACAACAGAGGATCGCGAAGTCGCAGAAGAGGAAGATCAT
CACCGAGGAGGTCGTCCGGGCGCAAAGAAGGGATCTCCGTCGGGATTTCC
TCGAGAGGAGGAGGACGAGACGTTTTTGACGGCGCCCCTCGTGTGCTACG
AGCTAGAGCTGGCGAACGCACGCGCGGGACGAGACGGGTGTCTCCAGCGA
CGCACCACCCGCCTATACGTTCAGCGGGATGGAATCCTGCATGCCGTGGC
GTATTGGTACCTGCAGCGACTCGGAGGAGTAGAGATTGACACGGGACCTT
GCGGCACGAGCCGGGGCGATAGGGCGGGTCGCCCGAGCACGCGGTCTCAG
TCTCACTTCAGGCAGGCGGCCGTCCTGCTGGACCACCCAGCTGTTGTGAG
AGAAGGGCAAACTATCGACCTAAGCGTGTTTTGCCACACTAGCCAAGGGG
TCGTCGTCCAGGTGGTGGGAATCTCGGACCCGCCGCAGCTTGTTGTGTGA
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