mRNA_H-elongata_contig16136.3921.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16136.3921.1
Unique NamemRNA_H-elongata_contig16136.3921.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: D7FT16_ECTSI (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT16_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 2.610e-106
Identity = 194/315 (61.59%), Postives = 210/315 (66.67%), Query Frame = 1 
Query: 1489 GLTAAGEPSKPQG---------KPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTADLMAEGSVDGDWDLVNMQRLSKAVEDTAKDTKIAAADAAAVAXXXXXXXXXPAPGVNVVGQ---PTSENPFDPFLGPSSGAEETK--------------FSDEAFDKAEQPEIKTP-LPAV-----TKWHRELCSLAEMGFENTTRNIALLEKHVAAPGKPGMERVLHELLSWHEVVIS 2337
            G TAAG+PS+  G         KPMARFVTDVSVADGSPLPPNTRF KTWCMRNDG + FP GCK++PVGGD+M+GPEDGV VE R PGEEFHVSV LTTP  SGRYIGYWRLRT EGQ FGHRVWADVLVTGGTADL+ EG+VDGDWDLVNMQRLSKAVEDT KD   AAA A               P     GQ   P S    D   G   G EE+K               +D   ++   P +  P  P+V     TKWHRELCSLAEMGFENT RN+ LLEKHV   G PGMERVLHELLSW EV I 
Sbjct:  271 GATAAGKPSRNSGDTGGNKSSAKPMARFVTDVSVADGSPLPPNTRFVKTWCMRNDGPVTFPSGCKIVPVGGDLMAGPEDGVAVEQRGPGEEFHVSVPLTTPPLSGRYIGYWRLRTAEGQKFGHRVWADVLVTGGTADLVDEGTVDGDWDLVNMQRLSKAVEDTGKDDAAAAAAAVEPTAPENIPSTVQTPSY-APGQAWDPASAKAQDADSGADRGFEESKSXXXXXXXXXXXXSVADPLPEQQAAPVVVAPSAPSVPPTMATKWHRELCSLAEMGFENTQRNVQLLEKHVVNSGSPGMERVLHELLSWREVSIQ 584
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A6H5JHM7_9PHAE (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM7_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.100e-30
Identity = 60/80 (75.00%), Postives = 67/80 (83.75%), Query Frame = 1 
Query: 1543 FVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVS-VTLTTPMQSGR 1779
            FVTDVSVADGSPLPPNTRF KTWCMRNDG + FP GCK++PVGGD+M+GPEDGV +E R PGEEFHVS VT  T   +GR
Sbjct:   44 FVTDVSVADGSPLPPNTRFVKTWCMRNDGPVTFPAGCKIVPVGGDLMAGPEDGVAIEQRGPGEEFHVSNVTSATGPITGR 123
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S3XSC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSC8_HETAK)

HSP 1 Score: 131 bits (330), Expect = 8.940e-30
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 1 
Query: 1486 RGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTA 1869
            R   AA  P K + KPMARFV DV++ DG+ + P   F KTW MRNDG + FP G +L+ VGGD+M G    V      PGEEF + + L  P++ GRYIGYWRL+ PEG +FGHR+W DV V  G +
Sbjct:   74 RQPVAAAAPGK-KDKPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 198
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A6S9FPI1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FPI1_HETAK)

HSP 1 Score: 131 bits (330), Expect = 1.450e-28
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 1 
Query: 1486 RGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTA 1869
            R   AA  P K + KPMARFV DV++ DG+ + P   F KTW MRNDG + FP G +L+ VGGD+M G    V      PGEEF + + L  P++ GRYIGYWRL+ PEG +FGHR+W DV V  G +
Sbjct:  255 RQPVAAAAPGK-KDKPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 379
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S4D636_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D636_HETAK)

HSP 1 Score: 131 bits (330), Expect = 5.780e-28
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 1 
Query: 1486 RGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTA 1869
            R   AA  P K + KPMARFV DV++ DG+ + P   F KTW MRNDG + FP G +L+ VGGD+M G    V      PGEEF + + L  P++ GRYIGYWRL+ PEG +FGHR+W DV V  G +
Sbjct:  464 RQPVAAAAPGK-KDKPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 588
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S1G709_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G709_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.030e-26
Identity = 65/132 (49.24%), Postives = 80/132 (60.61%), Query Frame = 1 
Query: 1498 AAGEPSKPQGKPM--ARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTADLMAEG 1887
            AA EPS P   P   A FV  V+    + + P TRF K W +RN G + +P G +L+ VG   MSGP +GV VE   PG E  V+V LT P +SGR+  YWRL TP+G  FGHRVWADV+V    AD  A+G
Sbjct:   23 AAVEPSAPPAPPTFRAHFVEHVTFQVKTTVAPGTRFEKVWRLRNVGDVQWPEGTRLVHVGNHDMSGPTEGVAVEAAHPGAEVDVAVELTAPAESGRHYSYWRLVTPDGVRFGHRVWADVVVAD-AADPPADG 153
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A6H5JIQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.280e-25
Identity = 80/161 (49.69%), Postives = 85/161 (52.80%), Query Frame = 1 
Query: 1918 MQRLSKAVEDTAKDTKIAAADAAAVAXXXXXXXXXPAPGVNVVGQ---PTSENPFDPFLGPSSGAEETKFSDEAF------------DKAEQPEIKTP-LPAV-----TKWHRELCSLAEMGFENTTRNIALLEKHVAAPGKPGMERVLHELLSWHEVVIS 2337
            MQRLSKAVEDT KD   AAA A               P     GQ   P S    D   G   G EETK SDEA             ++   P +  P  P+V     TKWHRELCSLAEMGFENT RN+ LLEKHV   G PGMERVLHELLSW EV I 
Sbjct:    1 MQRLSKAVEDTGKDDTPAAATAVEPTAPDNIPTTVETPSY-APGQAWDPESAKTRDTDTGADRGFEETKSSDEATAGGDGVGYVAAPEQQAAPVVVAPSAPSVPPTMATKWHRELCSLAEMGFENTQRNVQLLEKHVVNSGSPGMERVLHELLSWREVSIQ 160
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S3TLQ9_9SPIT (Hypothetical protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3TLQ9_9SPIT)

HSP 1 Score: 112 bits (281), Expect = 5.410e-22
Identity = 90/291 (30.93%), Postives = 135/291 (46.39%), Query Frame = 1 
Query: 1483 PRGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGV--TVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQN-FGHRVWADVLVTGGTADLMAEGSVDGDWDLVNMQRLSKAVEDTAKDTKIAAADAAAVAXXXXXXXXXPAPGVNVVGQPTSENPFDPFLGPSSGAEETKF-SDEAFDKAEQPEIKTPLPAVTKWHRELCSLAEMGFENTTRNIALLEKHVAAPGKPGMERVLHEL-----LSWHEV 2328
            PRG  A  +  KP  KP ARF++DVS+ +G+ + P T+F K W +RN G + +  G KL+ VGGD +S        +  P  PGEE  V+V +  P + GRY+GYWRL  P G+  FG RVW  + V    AD      +  D +L  +    K   + A+     A D A             AP ++        +   P   P     ET+  S +  D     E  +  P      + L  LA+MGFE+   N ++++KH+ + G   +++ + EL     L W E+
Sbjct:  408 PRGEEAPSKLEKPN-KPCARFISDVSIHEGTQMMPKTKFTKIWKIRNSGDVPWWPGSKLVFVGGDQLSADSSVPLPSAAPVQPGEEVDVAVDMEAPQEPGRYVGYWRLTGPMGRRKFGQRVWVHMQVV---ADPNEPTRIPSDEELCKLNDEMKLQREKAE-----ADDEADEGEDNTPPARTGAPSMDTADNAAVPSTSGPKPIPRKTPVETEEPSAQDADPCPSAEATSTPPVEVVKTKALDDLAQMGFEDEQLNASVIDKHMTSDGSLDLDKCVAELTDLADLEWDEM 689
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: D3B745_POLPP (ZZ-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B745_POLPP)

HSP 1 Score: 110 bits (276), Expect = 1.120e-21
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 1 
Query: 1522 QGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLV 1854
            + K +AR+V+D++V DGS   PN  F K W +RNDG   +P    L+   GD +  P DG+TV+P  PG++  V + LTTP   GRYIGYW+L TPEG  FG R++ D+ V
Sbjct:  286 KNKHLARYVSDITVKDGSVFGPNVPFTKIWRIRNDGREAWPENSTLVWSSGDRLGSP-DGITVDPVLPGQDIDVGLNLTTPSAPGRYIGYWKLVTPEGLGFGQRLYVDIFV 395
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BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: F4PSP5_CAVFA (ZZ-type zinc finger-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSP5_CAVFA)

HSP 1 Score: 110 bits (275), Expect = 1.740e-21
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 1 
Query: 1534 MARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTADLMAE 1884
            ++R+V+D++  DGS L P   F K W +RNDG   +P    L  V GD MS P DGVTVEP  PG +  V++ L  P   GRYIGYW+L TPEG  +G R++ADV V G   ++  E
Sbjct:  324 LSRYVSDMATKDGSLLTPGQGFTKIWRLRNDGNQQWPENTTLSFVSGDRMSSP-DGVTVEPALPGNDVDVAINLVAPSTPGRYIGYWKLFTPEGNAYGQRLFADVYVEGKKEEVAVE 439
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT16_ECTSI2.610e-10661.59N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JHM7_9PHAE2.100e-3075.00N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S3XSC8_HETAK8.940e-3050.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6S9FPI1_HETAK1.450e-2850.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D636_HETAK5.780e-2850.78Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S1G709_9STRA2.030e-2649.24Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6H5JIQ9_9PHAE2.280e-2549.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3TLQ9_9SPIT5.410e-2230.93Hypothetical protein n=3 Tax=Eukaryota TaxID=2759 ... [more]
D3B745_POLPP1.120e-2146.85ZZ-type zinc finger-containing protein n=1 Tax=Pol... [more]
F4PSP5_CAVFA1.740e-2147.01ZZ-type zinc finger-containing protein n=1 Tax=Cav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16136contigH-elongata_contig16136:2513..6203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.9
Seed ortholog evalue1.5e-93
Seed eggNOG ortholog2880.D7FT16
KEGG koko:K17987
KEGG Pathwayko04137,map04137
EggNOG free text desc.ubiquitin binding
EggNOG OGsKOG4351@1,KOG4351@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_004470.1
Exons5
Model size2340
Cds size2331
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16136.3921.1prot_H-elongata_contig16136.3921.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16136 2522..6203 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929946.1002495-UTR-H-elongata_contig16136:2512..25211622929946.1002495-UTR-H-elongata_contig16136:2512..2521Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16136 2513..2521 +
1691679218.6847248-UTR-H-elongata_contig16136:2512..25211691679218.6847248-UTR-H-elongata_contig16136:2512..2521Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16136 2513..2521 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929946.1178808-CDS-H-elongata_contig16136:2521..33611622929946.1178808-CDS-H-elongata_contig16136:2521..3361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 2522..3361 +
1691679218.694275-CDS-H-elongata_contig16136:2521..33611691679218.694275-CDS-H-elongata_contig16136:2521..3361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 2522..3361 +
1622929946.1365972-CDS-H-elongata_contig16136:3709..46001622929946.1365972-CDS-H-elongata_contig16136:3709..4600Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 3710..4600 +
1691679218.7048168-CDS-H-elongata_contig16136:3709..46001691679218.7048168-CDS-H-elongata_contig16136:3709..4600Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 3710..4600 +
1622929946.1530323-CDS-H-elongata_contig16136:4837..49901622929946.1530323-CDS-H-elongata_contig16136:4837..4990Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 4838..4990 +
1691679218.7156308-CDS-H-elongata_contig16136:4837..49901691679218.7156308-CDS-H-elongata_contig16136:4837..4990Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 4838..4990 +
1622929946.179483-CDS-H-elongata_contig16136:5154..55551622929946.179483-CDS-H-elongata_contig16136:5154..5555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 5155..5555 +
1691679218.7262442-CDS-H-elongata_contig16136:5154..55551691679218.7262442-CDS-H-elongata_contig16136:5154..5555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 5155..5555 +
1622929946.2017088-CDS-H-elongata_contig16136:6157..62031622929946.2017088-CDS-H-elongata_contig16136:6157..6203Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 6158..6203 +
1691679218.733759-CDS-H-elongata_contig16136:6157..62031691679218.733759-CDS-H-elongata_contig16136:6157..6203Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16136 6158..6203 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16136.3921.1

>prot_H-elongata_contig16136.3921.1 ID=prot_H-elongata_contig16136.3921.1|Name=mRNA_H-elongata_contig16136.3921.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=777bp
MVRFDSEQEFVAALHDLKSWKSCMRVEVTVLKTAPSSPTFRADTSTEAAK
RATDAATGEQRDGTVVSKVVEPFPSEGDSMISFVSDEAASSSATNSASTS
SAPSTISAAASTHSPEASVATEPPETLVLESRVPPLAAPSPAGSSASAAQ
SVASGDPLATTPTAQAKAFLTQVLPGLADVLARSMYAAQMMPNTMLPPSS
EASRNAEAFGPTAAGLAAAAATAAATAASMASSVSSVAENVRAAVDPSQF
TPSEAAQAPAYPSTAPPDYAPIPDEAPAAGNSRSSRSYTPAQTWRSRRSP
QLGGWGDGRRNCPRWMKDLARRQQQQEQLAGGMGYDLPLGVEVVRGAPPP
WCGPRMQRRKQDTASSAADGHKAVEDPVKKSETESNGIEAPTPPISVESS
NHCSTDVAHAVAESTSPEDANAVQAKSASKMVEKVDEVEKKPTNEDPNAV
FLTAVDAPEPPDYHDLLAASMRSLASSMSTSHSVNAAPQDKPRGLTAAGE
PSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKL
MPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTP
EGQNFGHRVWADVLVTGGTADLMAEGSVDGDWDLVNMQRLSKAVEDTAKD
TKIAAADAAAVAAADTSTAAAPAPGVNVVGQPTSENPFDPFLGPSSGAEE
TKFSDEAFDKAEQPEIKTPLPAVTKWHRELCSLAEMGFENTTRNIALLEK
HVAAPGKPGMERVLHELLSWHEVVIS*
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mRNA from alignment at H-elongata_contig16136:2513..6203+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16136.3921.1 ID=mRNA_H-elongata_contig16136.3921.1|Name=mRNA_H-elongata_contig16136.3921.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3691bp|location=Sequence derived from alignment at H-elongata_contig16136:2513..6203+ (Himanthalia elongata Himel1 dioecious)
GATGGAGACATGGTACGCTTCGATTCGGAACAAGAGTTCGTCGCTGCCTT
GCACGACTTAAAATCCTGGAAGAGCTGCATGCGTGTCGAGGTCACGGTCC
TCAAGACCGCTCCTTCCTCCCCCACTTTTCGGGCCGATACCTCCACTGAA
GCTGCCAAGCGCGCAACTGATGCAGCAACTGGAGAACAAAGAGATGGGAC
AGTGGTCTCGAAGGTGGTCGAGCCCTTCCCTTCGGAAGGTGACAGCATGA
TATCCTTCGTAAGCGACGAGGCTGCTAGTTCGTCGGCGACGAATTCCGCT
TCTACTTCGTCTGCTCCGTCCACTATCTCTGCTGCGGCTTCCACGCATTC
TCCCGAAGCCTCGGTAGCGACTGAACCTCCCGAGACCCTAGTCCTGGAAT
CTAGAGTGCCTCCTCTGGCGGCCCCCTCGCCGGCAGGGTCATCTGCATCG
GCGGCCCAATCTGTGGCCTCCGGTGATCCTTTGGCGACAACGCCGACCGC
CCAGGCCAAGGCCTTCCTGACTCAAGTACTCCCAGGTCTGGCGGATGTGC
TGGCCCGATCTATGTACGCGGCACAGATGATGCCCAACACGATGTTGCCT
CCGTCCTCGGAGGCTTCTCGCAACGCAGAGGCCTTCGGTCCCACGGCGGC
AGGGCTCGCGGCGGCAGCAGCGACGGCCGCCGCAACGGCAGCTAGTATGG
CGTCGAGCGTTAGCTCCGTCGCTGAAAACGTCCGGGCGGCAGTAGACCCG
TCTCAGTTTACCCCCAGTGAAGCTGCGCAGGCTCCCGCTTATCCATCCAC
GGCGCCACCCGACTACGCGCCCATCCCCGACGAGGCCCCTGCGGCTGGTG
TTGCCGCCCAAACCCCGGACGACCCCCCTGCGGTTGGTGTTGCCGCCCAA
ACCCTCGACGAGGCCACTACCTCGGGTGCCTCTACGACTACCCCTGAGGT
GACTGGTGCAGTGGTGCACACCGGCGTCGCATGCGATGGTTGCGAGGTGA
CCCCAATTGTAGGTACCCGCTACAAATGCGCTGTGCGGAGCGACTTCGAC
CTGTGCGAGGCGTGCGAGGCAGTCGCTGGTGCTGACTCCCCGTTTCCCTT
CCTCAAGATCAGGACCCCTGCTCAAGTCCCCTCTGCGATCGTGTGCCTGC
TTAGGCCCGACCAGCCCGCCAGCGCCGAAGAAGCCTCCGCGGGCAAGAAC
TCCCGCAGCTCAAGGTCCTACACACCCGCGCAGACTTGGCGCTCAAGGAG
AAGCCCTCAGCTTGGAGGCTGGGGCGATGGCCGCAGGAACTGCCCACGCT
GGATGAAGGATCTGGCTCGCCGCCAGCAGCAGCAGGAGCAGCTCGCTGGC
GGAATGGGCTACGATTTGCCCCTCGGTGTGGAGGTTGTCCGTGGTGCACC
TCCGCCGTGGTGTGGCCCCAGGATGCAGCGCCGCAAGCAGGACACCGCCT
CGTCGGCTGCAGATGGCCATAAGGCGGTAGAAGACCCCGTCAAGAAAAGC
GAGACCGAGAGTAACGGCATCGAGGCCCCCACTCCCCCCATCAGCGTCGA
AAGCAGCAACCATTGTTCCACTGACGTTGCCCACGCCGTCGCCGAGTCGA
CTTCCCCTGAAGATGCTAATGCCGTCCAGGCTAAGTCAGCCTCGAAGATG
GTGGAAAAAGTCGACGAGGTCGAGAAGAAGCCTACGAACGAAGATCCCAA
CGCCGTCTTTCTGACCGCTGTCGATGCGCCTGAGCCTCCGGACTACCACG
ACCTCCTCGCGGCATCTATGCGCTCGCTAGCCTCTTCCATGTCCACGTCT
CACTCTGTCAACGCGGCGCCCCAGGACAAGCCCCGGGGGCTAACGGCCGC
CGGAGAACCCAGTAAGCCCCAAGGAAAGCCCATGGCACGTTTCGTGACAG
ACGTGTCCGTGGCGGATGGCAGCCCGCTGCCGCCCAACACCCGCTTTGCG
AAGACGTGGTGCATGCGCAACGACGGGATGATGATTTTTCCTCACGGCTG
CAAGCTCATGCCCGTCGGAGGTGATATTATGTCTGGCCCGGAAGATGGAG
TTACCGTGGAGCCCCGCGCCCCTGGAGAAGAATTCCACGTGAGTGGACCG
GGCTATATTATATTGGTGTGCGATTTGTATCAGCACGGCAGTCGTCTCTT
TCGGCCACGGCGCATCTGCAGAGTTGGTGTTGTGGGTTTCAGGTATATTA
TCTTGCGAGCCAATTCAAAACACGAAACATTGTACATTGGCCTTGCCTCC
AAAAAGTGTATACAAGTATATACAGTCGCCTTTTTCCGCTATACCCCCCT
CCCCTCCCAACGACGATTCTGGCAGGTGAGCGTTACGCTGACGACGCCCA
TGCAGAGCGGCCGCTACATTGGCTACTGGCGCCTGCGCACTCCCGAGGGC
CAGAACTTCGGCCACCGCGTCTGGGCCGATGTCCTCGTGACGGGCGGCAC
AGCTGATCTCATGGCCGAAGGCAGCGTGGTGAGTGATACGTCGTTTTTGT
TCGGTATTTGCACGATCGTAATGGCACTGCGAAAACGCGACCCTCCGATC
ACCGCAATACACACAGCTACCTTTATCCTTCGCATCGGTGGCTCCATGCC
ATATCCATCCACAAACCACGCCACCCCCTTTCTGGCAAACAGGATGGCGA
CTGGGACCTGGTGAACATGCAGCGCCTGTCTAAGGCCGTGGAAGACACCG
CGAAGGACACGAAGATAGCGGCGGCCGATGCTGCAGCTGTAGCCGCAGCC
GATACCAGTACCGCTGCTGCCCCCGCTCCGGGCGTTAATGTCGTAGGCCA
GCCGACTTCCGAAAACCCTTTCGATCCTTTCCTTGGCCCATCCTCCGGCG
CGGAAGAGACCAAGTTTTCGGACGAGGCGTTTGATAAGGCCGAGCAACCC
GAAATTAAGACGCCCTTGCCCGCGGTCACCAAGTGGCACCGTGAACTGTG
CTCCCTCGCGGAGATGGGCTTCGAGAACACTACTCGCAACATTGCTCTGC
TGGAGAAGCACGTCGCCGCCCCTGGAAAACCCGGCATGGAGAGGTGAAGG
CATCGCCACTAACTGATGCTGCTACTGTATGGTAGTATTTTCCAGTACCT
TAGGTCATTAAACCTGTTTCACAAAACACGTTATTTCGTGGCCGCTCATA
TCTTGGTGACTTCGCCCACGCTACGCGCACCACGAGGGCACCACGAGGGC
ACCACCAGGGATCCGAAATGTGACAAAATGCCTCGTCGCGTTTAACCCCC
CGAGACTAGCAAAAAATCCCCCACCCGTGACGACGATACCTACCCTTCGG
TTCGAGCGATAGTCTAGATCAAATATATCTGCATTAGTGCCTAGTGCAGC
TTAAACTGTAGAAATCTGAATTAAAGGCTACAGAGACAGATGTCGGGCCT
TTCAAGGATGAAGCTGCAGTGACCGGGGTGTGTACGTTAAGAAAGCAGCC
CTACGACGCAGCACTTCCGCCGTGCTATCATACCACCCTCCTTGTAGAAG
GTCGTGAGCCGCGTTTCTGTTGCAGACTGTGTTGGGGATATGTGCCCGCC
ATTCCTTTTAAGTGGCTCTACTGATCTGATGTGTTTTGATAAGAGTATCC
TCCCGCCCACTCTAATTGTCTCCCATATAATCGACGTTGAAACAGGGTGC
TGCACGAGCTGCTCTCATGGCACGAGGTGGTCATCTCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig16136:2513..6203+

>mRNA_H-elongata_contig16136.3921.1 ID=mRNA_H-elongata_contig16136.3921.1|Name=mRNA_H-elongata_contig16136.3921.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4662bp|location=Sequence derived from alignment at H-elongata_contig16136:2513..6203+ (Himanthalia elongata Himel1 dioecious)
ATGGTACGCTTCGATTCGGAACAAGAGTTCGTCGCTGCCTTGCACGACTT
AAAATCCTGGAAGAGCTGCATGCGTGTCGAGGTCACGGTCCTCAAGACCG
CTCCTTCCTCCCCCACTTTTCGGGCCGATACCTCCACTGAAGCTGCCAAG
CGCGCAACTGATGCAGCAACTGGAGAACAAAGAGATGGGACAGTGGTCTC
GAAGGTGGTCGAGCCCTTCCCTTCGGAAGGTGACAGCATGATATCCTTCG
TAAGCGACGAGGCTGCTAGTTCGTCGGCGACGAATTCCGCTTCTACTTCG
TCTGCTCCGTCCACTATCTCTGCTGCGGCTTCCACGCATTCTCCCGAAGC
CTCGGTAGCGACTGAACCTCCCGAGACCCTAGTCCTGGAATCTAGAGTGC
CTCCTCTGGCGGCCCCCTCGCCGGCAGGGTCATCTGCATCGGCGGCCCAA
TCTGTGGCCTCCGGTGATCCTTTGGCGACAACGCCGACCGCCCAGGCCAA
GGCCTTCCTGACTCAAGTACTCCCAGGTCTGGCGGATGTGCTGGCCCGAT
CTATGTACGCGGCACAGATGATGCCCAACACGATGTTGCCTCCGTCCTCG
GAGGCTTCTCGCAACGCAGAGGCCTTCGGTCCCACGGCGGCAGGGCTCGC
GGCGGCAGCAGCGACGGCCGCCGCAACGGCAGCTAGTATGGCGTCGAGCG
TTAGCTCCGTCGCTGAAAACGTCCGGGCGGCAGTAGACCCGTCTCAGTTT
ACCCCCAGTGAAGCTGCGCAGGCTCCCGCTTATCCATCCACGGCGCCACC
CGACTACGCGCCCATCCCCGACGAGGCCCCTGCGGCTGGTATGGTACGCT
TCGATTCGGAACAAGAGTTCGTCGCTGCCTTGCACGACTTAAAATCCTGG
AAGAGCTGCATGCGTGTCGAGGTCACGGTCCTCAAGACCGCTCCTTCCTC
CCCCACTTTTCGGGCCGATACCTCCACTGAAGCTGCCAAGCGCGCAACTG
ATGCAGCAACTGGAGAACAAAGAGATGGGACAGTGGTCTCGAAGGTGGTC
GAGCCCTTCCCTTCGGAAGGTGACAGCATGATATCCTTCGTAAGCGACGA
GGCTGCTAGTTCGTCGGCGACGAATTCCGCTTCTACTTCGTCTGCTCCGT
CCACTATCTCTGCTGCGGCTTCCACGCATTCTCCCGAAGCCTCGGTAGCG
ACTGAACCTCCCGAGACCCTAGTCCTGGAATCTAGAGTGCCTCCTCTGGC
GGCCCCCTCGCCGGCAGGGTCATCTGCATCGGCGGCCCAATCTGTGGCCT
CCGGTGATCCTTTGGCGACAACGCCGACCGCCCAGGCCAAGGCCTTCCTG
ACTCAAGTACTCCCAGGTCTGGCGGATGTGCTGGCCCGATCTATGTACGC
GGCACAGATGATGCCCAACACGATGTTGCCTCCGTCCTCGGAGGCTTCTC
GCAACGCAGAGGCCTTCGGTCCCACGGCGGCAGGGCTCGCGGCGGCAGCA
GCGACGGCCGCCGCAACGGCAGCTAGTATGGCGTCGAGCGTTAGCTCCGT
CGCTGAAAACGTCCGGGCGGCAGTAGACCCGTCTCAGTTTACCCCCAGTG
AAGCTGCGCAGGCTCCCGCTTATCCATCCACGGCGCCACCCGACTACGCG
CCCATCCCCGACGAGGCCCCTGCGGCTGGTAACTCCCGCAGCTCAAGGTC
CTACACACCCGCGCAGACTTGGCGCTCAAGGAGAAGCCCTCAGCTTGGAG
GCTGGGGCGATGGCCGCAGGAACTGCCCACGCTGGATGAAGGATCTGGCT
CGCCGCCAGCAGCAGCAGGAGCAGCTCGCTGGCGGAATGGGCTACGATTT
GCCCCTCGGTGTGGAGGTTGTCCGTGGTGCACCTCCGCCGTGGTGTGGCC
CCAGGATGCAGCGCCGCAAGCAGGACACCGCCTCGTCGGCTGCAGATGGC
CATAAGGCGGTAGAAGACCCCGTCAAGAAAAGCGAGACCGAGAGTAACGG
CATCGAGGCCCCCACTCCCCCCATCAGCGTCGAAAGCAGCAACCATTGTT
CCACTGACGTTGCCCACGCCGTCGCCGAGTCGACTTCCCCTGAAGATGCT
AATGCCGTCCAGGCTAAGTCAGCCTCGAAGATGGTGGAAAAAGTCGACGA
GGTCGAGAAGAAGCCTACGAACGAAGATCCCAACGCCGTCTTTCTGACCG
CTGTCGATGCGCCTGAGCCTCCGGACTACCACGACCTCCTCGCGGCATCT
ATGCGCTCGCTAGCCTCTTCCATGTCCACGTCTCACTCTGTCAACGCGGC
GCCCCAGGACAAGCCCCGGGGGCTAACGGCCGCCGGAGAACCCAGTAAGC
CCCAAGGAAAGCCCATGGCACGTTTCGTGACAGACGTGTCCGTGGCGGAT
GGCAGCCCGCTGCCGCCCAACACCCGCTTTGCGAAGACGTGGTGCATGCG
CAACGACGGGATGATGATTTTTCCTCACGGCTGCAAGCTCATGCCCGTCG
GAGGTGATATTATGTCTGGCCCGGAAGATGGAGTTACCGTGGAGCCCCGC
GCCCCTGGAGAAGAATTCCACAACTCCCGCAGCTCAAGGTCCTACACACC
CGCGCAGACTTGGCGCTCAAGGAGAAGCCCTCAGCTTGGAGGCTGGGGCG
ATGGCCGCAGGAACTGCCCACGCTGGATGAAGGATCTGGCTCGCCGCCAG
CAGCAGCAGGAGCAGCTCGCTGGCGGAATGGGCTACGATTTGCCCCTCGG
TGTGGAGGTTGTCCGTGGTGCACCTCCGCCGTGGTGTGGCCCCAGGATGC
AGCGCCGCAAGCAGGACACCGCCTCGTCGGCTGCAGATGGCCATAAGGCG
GTAGAAGACCCCGTCAAGAAAAGCGAGACCGAGAGTAACGGCATCGAGGC
CCCCACTCCCCCCATCAGCGTCGAAAGCAGCAACCATTGTTCCACTGACG
TTGCCCACGCCGTCGCCGAGTCGACTTCCCCTGAAGATGCTAATGCCGTC
CAGGCTAAGTCAGCCTCGAAGATGGTGGAAAAAGTCGACGAGGTCGAGAA
GAAGCCTACGAACGAAGATCCCAACGCCGTCTTTCTGACCGCTGTCGATG
CGCCTGAGCCTCCGGACTACCACGACCTCCTCGCGGCATCTATGCGCTCG
CTAGCCTCTTCCATGTCCACGTCTCACTCTGTCAACGCGGCGCCCCAGGA
CAAGCCCCGGGGGCTAACGGCCGCCGGAGAACCCAGTAAGCCCCAAGGAA
AGCCCATGGCACGTTTCGTGACAGACGTGTCCGTGGCGGATGGCAGCCCG
CTGCCGCCCAACACCCGCTTTGCGAAGACGTGGTGCATGCGCAACGACGG
GATGATGATTTTTCCTCACGGCTGCAAGCTCATGCCCGTCGGAGGTGATA
TTATGTCTGGCCCGGAAGATGGAGTTACCGTGGAGCCCCGCGCCCCTGGA
GAAGAATTCCACGTGAGCGTTACGCTGACGACGCCCATGCAGAGCGGCCG
CTACATTGGCTACTGGCGCCTGCGCACTCCCGAGGGCCAGAACTTCGGCC
ACCGCGTCTGGGCCGATGTCCTCGTGACGGGCGGCACAGCTGATCTCATG
GCCGAAGGCAGCGTGGTGAGCGTTACGCTGACGACGCCCATGCAGAGCGG
CCGCTACATTGGCTACTGGCGCCTGCGCACTCCCGAGGGCCAGAACTTCG
GCCACCGCGTCTGGGCCGATGTCCTCGTGACGGGCGGCACAGCTGATCTC
ATGGCCGAAGGCAGCGTGGATGGCGACTGGGACCTGGTGAACATGCAGCG
CCTGTCTAAGGCCGTGGAAGACACCGCGAAGGACACGAAGATAGCGGCGG
CCGATGCTGCAGCTGTAGCCGCAGCCGATACCAGTACCGCTGCTGCCCCC
GCTCCGGGCGTTAATGTCGTAGGCCAGCCGACTTCCGAAAACCCTTTCGA
TCCTTTCCTTGGCCCATCCTCCGGCGCGGAAGAGACCAAGTTTTCGGACG
AGGCGTTTGATAAGGCCGAGCAACCCGAAATTAAGACGCCCTTGCCCGCG
GTCACCAAGTGGCACCGTGAACTGTGCTCCCTCGCGGAGATGGGCTTCGA
GAACACTACTCGCAACATTGCTCTGCTGGAGAAGCACGTCGCCGCCCCTG
GAAAACCCGGCATGGAGAGGATGGCGACTGGGACCTGGTGAACATGCAGC
GCCTGTCTAAGGCCGTGGAAGACACCGCGAAGGACACGAAGATAGCGGCG
GCCGATGCTGCAGCTGTAGCCGCAGCCGATACCAGTACCGCTGCTGCCCC
CGCTCCGGGCGTTAATGTCGTAGGCCAGCCGACTTCCGAAAACCCTTTCG
ATCCTTTCCTTGGCCCATCCTCCGGCGCGGAAGAGACCAAGTTTTCGGAC
GAGGCGTTTGATAAGGCCGAGCAACCCGAAATTAAGACGCCCTTGCCCGC
GGTCACCAAGTGGCACCGTGAACTGTGCTCCCTCGCGGAGATGGGCTTCG
AGAACACTACTCGCAACATTGCTCTGCTGGAGAAGCACGTCGCCGCCCCT
GGAAAACCCGGCATGGAGAGGGTGCTGCACGAGCTGCTCTCATGGCACGA
GGTGGTCATCTCTTGAGGTGCTGCACGAGCTGCTCTCATGGCACGAGGTG
GTCATCTCTTGA
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