mRNA_H-elongata_contig16131.3918.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: A0A6H5JTX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTX4_9PHAE) HSP 1 Score: 319 bits (817), Expect = 3.270e-103 Identity = 165/239 (69.04%), Postives = 187/239 (78.24%), Query Frame = 1
Query: 13 ENFNALFDQSFFVFLDTKFFGQALPRGAHRALTSLSLYLPQV---------MTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGRRVWPLWALLFLGNRLAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPKGALKTDLAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSLHGVALKDMKRRLREWESCLRNEQETSSKLAMA 702
NFNALFDQSFFVFLDTK F +PRG H LT+L LY P+V MTQV TP+AD YGTY+L+M AA FKL+AG LMF GR+ WP+W LLFLGNRLA T WGFYNLSFSDVIDEDTLRN+R ESMSVSVHG+QALFVKPAQSLAPM+GMAFLP GALKTDL M +QA V+AAAFT+M AVPA CGLVQVLIWR Y LHG ALKDMK +L+EWE L + + ++ + MA
Sbjct: 335 SNFNALFDQSFFVFLDTKLFEMVVPRGPHGVLTALCLYAPKVRNTALTRILMTQVLTPVADRYGTYKLIMGAALFKLVAGVLMFACGRQAWPMWTLLFLGNRLAATAWGFYNLSFSDVIDEDTLRNKRPESMSVSVHGLQALFVKPAQSLAPMVGMAFLPAGALKTDLVDMTMRQAEGVQAAAFTLMWAVPAGCGLVQVLIWRAYRLHGAALKDMKMKLKEWERFLSYKSDDATGVGMA 573
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: A0A7M7HE62_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HE62_STRPU) HSP 1 Score: 110 bits (276), Expect = 1.430e-24 Identity = 64/207 (30.92%), Postives = 113/207 (54.59%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFFVFLDTKFFGQA-LPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGRRVWPLWALLFLGNR-LAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPK-GALKTDLAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSLHG 612
+NF + F+ F +F T+ +A L + +A+ + PQ++ + YG+Y++++W+ FK+ + LMF G + + L F+ +R L + ++ F+NL SD+IDED L+++R +S SV G ALF KPA SLAPM+ ++ L K G + ++ +K F + C +P + G +Q+++WR YS+
Sbjct: 257 INFCQIFHMDFGANFLAIFVTQLIPEADLSQFFRKAMFGTTFIFPQLLVLFLSIFVSRYGSYRIIIWSFYFKICSAFLMFLIGAQHTHIMVLFFVMDRSLPEAIFSFFNLCLSDIIDEDQLKSQRASPLSSSVFGYNALFTKPASSLAPMMVVSILNKYGYKELQDEKLSLHDTTQLKGTMFILACFIPIIVGSLQLMVWRNYSIRS 463
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: A0A369SLA8_9METZ (Transmembrane protein 180 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SLA8_9METZ) HSP 1 Score: 108 bits (271), Expect = 6.550e-24 Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFFVFLDTKFFGQALPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAG-RRVWPLWALLFLGNRLAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPKGALKTDLAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSLHGVALKD 627
MNF++ F+ +FF G +L A + + LPQ++ +F+PL +G+Y+ +M + K MF +G + L + L L + + +NLS SD+ID+D + +R +S + G ALF KPAQSLAPM ++FL + A+ ++ A F+++C VP + ++Q+LIW YSL G +K+
Sbjct: 247 MNFLQIFHNTIGSNFFSIFADNLIGSSLLPQARSIMAGSAFVLPQILVLLFSPLLARFGSYRCIMVSFFVKFALALAMFLSGPSNMIFLIFFMVLDRSLPEATFSLFNLSVSDIIDDDRAKYKRRAPISSMIFGTNALFTKPAQSLAPMFVVSFLTGYGYQHGSQAVTIPAKPELRQAMFSMICLVPIVASVIQILIWSFYSLRGQRVKN 456
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: UPI000779F96B (transmembrane protein 180-like n=3 Tax=Acropora TaxID=6127 RepID=UPI000779F96B) HSP 1 Score: 108 bits (271), Expect = 6.960e-24 Identity = 66/212 (31.13%), Postives = 113/212 (53.30%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFF-VFLDTKFFGQALPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAG-RRVWPLWALLFLGNRLAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPKGALKTD--------LAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSL 606
MNF + F+ F +FF +F++ A+P + LT LP+++ +PL +G+Y++++W+ K+ +L+F AG +W L+ L + N L + +NLS SD+ID+D + R+ +S + G ALF KPAQSLAPM+ + L + K ++ + QQ +K A F ++C VP + + Q++ W+ Y L
Sbjct: 250 MNFFQVFHTTFCSNFFLIFVEHLIGSDAIPAILYSLLTGSVFILPRILVLATSPLLAKFGSYKVILWSFYVKVSLPALVFLAGLNNIWILYIFLIVDNCLPDATFSLFNLSVSDIIDDDMEKYHRNAPISSMIFGTNALFTKPAQSLAPMMVVHILSRYGYKDSQQTGKGEIVSVIASQQ---LKDAMFCLLCMVPLVVAVFQIIFWKFYPL 458
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: UPI00106A20F1 (transmembrane protein 180-like isoform X1 n=5 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A20F1) HSP 1 Score: 108 bits (270), Expect = 9.220e-24 Identity = 62/212 (29.25%), Postives = 108/212 (50.94%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFFVFLDTKFFGQALPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGRRVWPLWALLF-LGNRLAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPKGALKTDLAAMNP-------QQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSLHG 612
MNF++ F+ + +FF+ + G LP L + +PQ++ + PL YG+Y +++ + KL+ L++ +G + A+ F L + + +N+ SD+ID+D +++R +S V G ALF KPAQS APML +A L M P + ++K+ F +MC +PA+ ++Q+L+W Y+L G
Sbjct: 242 MNFLQIFHTTYSSNFFLIFAEELMGSQLPPFVRSLLAGSTFMIPQIIGLLANPLIVKYGSYHIILSSFYIKLVMAVLLYLSGPNQILILAVFFVLDKSIPSATFSQFNMPLSDIIDDDLAKHKRSSPISSLVFGTNALFTKPAQSFAPMLIVAILSSYGYDDKSHTMKPTTSPGSLSSSADLKSVMFNVMCFLPAIIAILQILVWNSYTLRG 453
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: A0A6P8IHK0_ACTTE (transmembrane protein 180-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IHK0_ACTTE) HSP 1 Score: 108 bits (269), Expect = 1.290e-23 Identity = 68/210 (32.38%), Postives = 106/210 (50.48%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFFVFLDTKFFG-QALPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGRR-VWPLWALLFLGNRLAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFL------PKGALKTDLAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSL 606
MNF + F++ F +FF+ G LP + S +PQ++ V + L YG+Y L++W+ KL +L++ GR+ +W L + F L +NLS +D++D D + RR +S + G ALF KPAQSLAPML + L KG+ KT ++ +V F +MC VP +Q+++WR Y+L
Sbjct: 246 MNFFQVFHSTFQSNFFLIFAEYLIGPDVLPAFGLSFIAGSSYVVPQIIVLVLSTLLSKYGSYYLILWSMYIKLTMATLVYIFGRQYIWLLAFMFFADRSLQAASTSLFNLSLADIVDSDXEKYRRRSPVSSMIFGTNALFTKPAQSLAPMLVVFILNRYGYQKKGSQKTLRSSGEYVALQDVM---FQLMCLVPMFIAFIQIIVWRWYTL 452
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: UPI001BB1786D (transmembrane protein 180-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1786D) HSP 1 Score: 107 bits (266), Expect = 4.670e-23 Identity = 63/207 (30.43%), Postives = 109/207 (52.66%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFFVFLDTKFFGQA-LPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGRRVWPLWALLFLGNR-LAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPKGALKT-DLAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSLHG 612
+NF + F+ + +F T+ + L + +AL + LPQ + + + YG Y++++W+ FK+ + MF G + + F+ +R L ++ F+NL SD+IDED LRN+R +S SV G ALF KPA SLAPM+ + L + + + ++ Q +K F + C +P + G +Q+L+WR Y++
Sbjct: 311 INFCQIFHMNYGANFLAVFVTQLIPETDLSQFIRKALFGTTFILPQFLVLLLSIFVTRYGYYRIIVWSFYFKICSAIFMFLIGAQHTHIMVFFFIMDRSLPDAIFSFFNLCLSDIIDEDQLRNKRSSPLSSSVFGYNALFTKPASSLAPMMVVNILNRYSYQELQDEKLSLQHTTELKGTMFILACFIPIIIGSLQLLVWRNYTIRS 517
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: UPI0009E1BEBD (transmembrane protein 180-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1BEBD) HSP 1 Score: 106 bits (265), Expect = 4.840e-23 Identity = 62/208 (29.81%), Postives = 108/208 (51.92%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFFVFLDTKFFG-QALPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGRR-VWPLWALLFLGNRLAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPKGALKTDLAAMNPQQANNVKA----AAFTIMCAVPALCGLVQVLIWRCYSL 606
MNF + F+ F +FF+ G +P + LT LP+++ + +PL G+Y++++W+ K+ ++++ AGR +W L+ L + N L + +NLS SD+ID D + +R+ +S + G ALF KPAQSLAPM+ + L K L + ++ A F ++C +P + +VQ++ W+ Y L
Sbjct: 255 MNFFQVFHTTFCSNFFLIFAEHLIGPDVIPAILYSLLTGSVFLLPRLLVLLTSPLLARLGSYKVILWSFYIKVSLPAIVYFAGRNNIWILYFFLIIDNSLPDATFSLFNLSVSDIIDHDMEKYQRNAPVSSMIFGTNALFTKPAQSLAPMMVVHILSWYGYKETLGVNKDKASSGTSPQLLDAMFFLLCLIPLVIAIVQIVFWKLYPL 462
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: A0A3M6TDC0_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TDC0_POCDA) HSP 1 Score: 105 bits (262), Expect = 8.720e-23 Identity = 64/209 (30.62%), Postives = 112/209 (53.59%), Query Frame = 1
Query: 1 MNFVENFNALFDQSFFVFLDTKFFGQA-LPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGR-RVWPLWALLFLGNRLAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPKGALK-----TDLAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSL 606
MNF + F+ F +FF+ G +P + LT +P+++ + +PL +G+Y++++W+ KL ++F AGR +W L+ L + N L + +NLS SD+ID D + +R+ +S + G ALF KPAQSLAPM+ + L K + +++ +P Q + A F ++C +P + +VQ+++W Y L
Sbjct: 210 MNFFQVFHVTFCSNFFLIFAEHLIGPGVIPAVLYSLLTGSVFLVPRLLVLLTSPLLAKFGSYKVILWSFYVKLSLPVVVFLAGRSNIWALYFFLIIDNSLPDATFSLFNLSVSDIIDADMEKYQRNAPVSSMIFGTNALFTKPAQSLAPMMVVHILSWYGYKDTQGNSKVSSGSPGQLLD---AMFFLLCIIPLIIAMVQIVVWAFYPL 415
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Match: UPI001BB1641A (transmembrane protein 180-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1641A) HSP 1 Score: 104 bits (259), Expect = 4.200e-22 Identity = 59/179 (32.96%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 82 LPRGAHRALTSLSLYLPQVMTQVFTPLADHYGTYQLMMWAAAFKLMAGSLMFCAGRRVWPLWALLFLGNR-LAQTVWGFYNLSFSDVIDEDTLRNRRHESMSVSVHGVQALFVKPAQSLAPMLGMAFLPK-GALKTDLAAMNPQQANNVKAAAFTIMCAVPALCGLVQVLIWRCYSLHG 612
L + +AL + LPQ + + + G Y++++W+ FK+ + LMF G + + F+ +R L ++ F+NL SD+IDED LRN R +S SV G ALF KPA SLAPM+ + L + G + ++ Q +K F + C +P + G +Q+L+WR Y++
Sbjct: 339 LSQFIRKALFGTTFILPQFLVLLLSIFVTRCGYYRIIVWSFYFKICSAILMFLIGAQHTHIMVFFFIMDRSLPDAIFSFFNLCLSDIIDEDQLRNERSSPLSSSVFGYNALFTKPASSLAPMMVVNILNRYGYQELQDEKLSLQHTTELKGTMFMLACFIPIIIGSLQLLVWRNYTIRS 517 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16131.3918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16131.3918.1 >prot_H-elongata_contig16131.3918.1 ID=prot_H-elongata_contig16131.3918.1|Name=mRNA_H-elongata_contig16131.3918.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp MNFVENFNALFDQSFFVFLDTKFFGQALPRGAHRALTSLSLYLPQVMTQVback to top mRNA from alignment at H-elongata_contig16131:5..2565+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16131.3918.1 ID=mRNA_H-elongata_contig16131.3918.1|Name=mRNA_H-elongata_contig16131.3918.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2561bp|location=Sequence derived from alignment at H-elongata_contig16131:5..2565+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16131:5..2565+ >mRNA_H-elongata_contig16131.3918.1 ID=mRNA_H-elongata_contig16131.3918.1|Name=mRNA_H-elongata_contig16131.3918.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig16131:5..2565+ (Himanthalia elongata Himel1 dioecious)back to top |