mRNA_H-elongata_contig1613.3916.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1613.3916.1
Unique NamemRNA_H-elongata_contig1613.3916.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: A0A6H5K058_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K058_9PHAE)

HSP 1 Score: 1059 bits (2738), Expect = 0.000e+0
Identity = 539/690 (78.12%), Postives = 589/690 (85.36%), Query Frame = 1
Query:    4 LASIATGGLLLTRCAAFQTAPLSPARRSLEGTRRDRFADESCSYAARLPQPPPT-STVFDGDETDASVVLGEFVREHRE-WEGHEYGFDWYLEKARRGMVGNSAGFSPLRMTFWKPTEEVVELSLWDTTYIILRNFGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLKSNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGSAGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALRRPSSAVSPHVNGH------------RGEE-RGVNGAKLD 2028
            LAS A G LLL++CA    A + PA  +  GTR         + A RLP    T +TV +GD+ D S VL +  R   E WEGHEYGFDWYLEKARRGM+ +++GF+PLRM FW+PTE   +L+LWD  YIILRN GQM+GLPSVDNAPVAKI KY GSWLTFL+KV+NGRLEDLAGGPLFLMLE+ F  EGPVYKLAFGPRSFIVVSDPVMAKHVLKS+V DYDKGVLA+IL PIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTL+VEAEAAA++G VLDMEEKFCSLSLDIIGRAVFNY+F SVS+ESPVIKAVYRVLREAEHRSSSFIPYWKLPFA+ WI SQ EFA+D+ LLN VLD+LIQKALDTQ+MADIEELE+RDLD ++DPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNP+YLAK+H E+D CMGPDG H PTFDDLP LLYTRLALVEALRLYPEPPVIIRRALKETELPQGG+ G VKLVKGTD+FISTWNLHRS  LWDRPAEY PERFLS+FHNK V GWKGFTPR  AGLYPSE+DADFAFLPFGGG RKCVGDQFAMMEATVTLAM++++LDFTM GT +DVGMVTGATIHTKNGLKM A+LR PSSA  P VNGH             GE   G+NGAKLD
Sbjct:   50 LASFAAGSLLLSKCAVGFHAHVPPASGTRGGTRNA----PPTTRATRLPYQASTGTTVVEGDQVDTSAVLDDLARVDVEGWEGHEYGFDWYLEKARRGMISSNSGFAPLRMNFWRPTEAAEKLTLWDMIYIILRNLGQMVGLPSVDNAPVAKIDKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSSVGDYDKGVLATILEPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLVVEAEAAARTGQVLDMEEKFCSLSLDIIGRAVFNYEFDSVSKESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDMGLLNTVLDKLIQKALDTQEMADIEELERRDLDEVEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPEYLAKVHAEIDECMGPDGSHMPTFDDLPGLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGADGPVKLVKGTDVFISTWNLHRSKELWDRPAEYMPERFLSEFHNKGVVGWKGFTPRMGAGLYPSEIDADFAFLPFGGGTRKCVGDQFAMMEATVTLAMMLKKLDFTMVGTPEDVGMVTGATIHTKNGLKMTASLREPSSA-GPAVNGHAAAANGHSSTGINGEGINGINGAKLD 734          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: D7G594_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G594_ECTSI)

HSP 1 Score: 1024 bits (2648), Expect = 0.000e+0
Identity = 508/635 (80.00%), Postives = 558/635 (87.87%), Query Frame = 1
Query:  166 STVFDGDETDASVVLGEFVREHRE-WEGHEYGFDWYLEKARRGMVGNSAGFSPLRMTFWKPTEEVVELSLWDTTYIILRNFGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLKSNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGSAGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALRRPSSAVSPHVNGHRG-----EERGVNG--------AKLD 2028
            +TV +G++ DAS VL +  R   E WEGHE+GFDWYLEKARRGM+ +++GF+PLRM FW+PTE   ELS WD  YIILRN GQM+GLPSVDNAPVAKI KY GSWLTFL+KV+NGRLEDLAGGPLFLMLE+ F  EGPVYKLAFGPRSFIVVSDPVMAKHVLKS+V DYDKGVLA+IL PIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTL+VEAEAAA++G VLDMEEKFCSLSLDIIGRAVFNY+F SVS+ESPVIKAVYRVLREAEHRSSSFIPYWKLPFA+ WI SQ EFA+DI LLN VLD+LIQ+ALDTQ+ AD+EELE+RDLDA++DPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNL QNP+YLAK+H E+D CMGPDG H PTFDDLP LLYTRLALVEALRLYPEPPVIIRRALKETELPQGG+ G VKLVKGTD+FISTWNLHRS  LWDRPAEY PERFLS+F N+ V GWKGFTP+  AGLYPSE+DADFAFLPFGGG RKCVGDQFAMMEATV+LAM++++LDFT+ GT +DVGMVTGATIHTKNGLKM  +LR PSSA  P VNGH          G+NG        AKLD
Sbjct:   92 TTVVEGEQVDASAVLDDLARVDVEGWEGHEHGFDWYLEKARRGMISSNSGFAPLRMNFWRPTEAAEELSSWDMIYIILRNLGQMVGLPSVDNAPVAKIDKYTGSWLTFLQKVSNGRLEDLAGGPLFLMLEKYFLAEGPVYKLAFGPRSFIVVSDPVMAKHVLKSSVGDYDKGVLATILQPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLVVEAEAAARTGQVLDMEEKFCSLSLDIIGRAVFNYEFDSVSKESPVIKAVYRVLREAEHRSSSFIPYWKLPFANKWIASQVEFARDIGLLNTVLDKLIQRALDTQETADVEELERRDLDAVEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLAQNPEYLAKMHAEIDECMGPDGSHMPTFDDLPGLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGADGPVKLVKGTDVFISTWNLHRSKELWDRPAEYMPERFLSEFRNEGVVGWKGFTPKMGAGLYPSEIDADFAFLPFGGGTRKCVGDQFAMMEATVSLAMMLKKLDFTLVGTPEDVGMVTGATIHTKNGLKMTVSLREPSSA-GPAVNGHAAAVNGHSSTGINGXXXXXXXGAKLD 725          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: A0A835ZEV7_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV7_9STRA)

HSP 1 Score: 794 bits (2051), Expect = 8.140e-282
Identity = 398/566 (70.32%), Postives = 460/566 (81.27%), Query Frame = 1
Query:  256 GFDWYLEKARRGMVGNSAGFSPLRMTFWKPTEEVVEL---SLWDTTYIILRNFGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLKSNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGSAGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTA-AGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKA 1941
            GFDW LE+ARR + G +  FSP RM FW+P E+  E+   +LWDT YI+L N  Q  G  SVD APVA++  +KGS+ TFL+KV +GRLEDLAGGPLFL+LE+ F + GPVYKLAFGPRSFIVVSDPVMAKH+LKSNV  YDKGVLASIL PIMGKGLIPADP+TWKVRRRAIVPGFHK WLNRMMRLFAEC + L+ +   AA  G  LDMEEKFCS+SLDIIGRAVFNYDFGS ++ESP   AVYRVLREAEHRSSSFIPYWKLPFA+  + SQ EF+ D+ LLN+VLDELI KA+ TQQ+AD+EELE RDLD  +DPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAA+LTWTLFNL QNP+  A++  E+D  +GPD    P FDDL  L  TRLALVEALRLYPEPPV+IRRAL+E  LP GG+   ++L +G+D+FISTWNLHRSPALWD P EY PERF+    N  V+GW G+ P+   AGLYP+E+ +DFAFLPFGGG RKCVGDQFA+MEATVTLA+L+RR D ++AG  +  GMVTGATIHT NGL M+A
Sbjct:    3 GFDWQLERARRALEGPA--FSPFRMDFWRPVEDESEIGVVTLWDTMYILLMNVAQKFGWESVDGAPVAEVGSFKGSFFTFLQKVASGRLEDLAGGPLFLLLEKYFHKYGPVYKLAFGPRSFIVVSDPVMAKHLLKSNVGAYDKGVLASILEPIMGKGLIPADPQTWKVRRRAIVPGFHKRWLNRMMRLFAECNEALLDQVGHAADEGRTLDMEEKFCSVSLDIIGRAVFNYDFGSTNKESP---AVYRVLREAEHRSSSFIPYWKLPFATQLLASQVEFSADMRLLNDVLDELISKAVATQQVADVEELESRDLDVAEDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAVLTWTLFNLAQNPELTARVQAEIDAVLGPD--RLPEFDDLAPLQLTRLALVEALRLYPEPPVLIRRALREDALPPGGTGTPIRLPRGSDVFISTWNLHRSPALWDAPQEYNPERFMRPHSNPAVTGWNGYDPKVGLAGLYPNEIASDFAFLPFGGGQRKCVGDQFALMEATVTLALLLRRFDLSLAGPPEATGMVTGATIHTANGLMMRA 561          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: A0A835YS73_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS73_9STRA)

HSP 1 Score: 738 bits (1905), Expect = 1.900e-258
Identity = 397/653 (60.80%), Postives = 462/653 (70.75%), Query Frame = 1
Query:   28 LLLTRCAAFQTAPLSPARRSLEGTRRDRFADESCSYAARLPQPPPTSTVFDGDETDASVVLGEFVREHREWEGHEYGFDWYLEKARRGMVGNS-------AGFSPLRMTFWKPT--EEVVEL----SLWDTTYIILRNFGQM-MGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLKSNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGSAGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTA-AGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKA 1941
            LLLT C AF+ +  +P  R    T        S + A R P           D   ++  L E       WEG +YGFDW LE+ARR MV +S        GF+P RMT W+P   E+  ++    S WD+ YII  N  Q   G PS+D APVA +  + GSW TFL+KV +GRLEDLAGGPLFL+LE+   + GPVYKLAFGPRSFIV+SDPV AKH+LK+N V YDKG+LA+IL PIMGKGLIPADP+TWKVRRRAIVPGFHK WLNRM+RLFAEC + L+ E   AA  G VLDMEEKFCS+SLDIIGRAVFNYDFGS + ESPVIKAVYRVLREAEHRS+SFIPYWKLPFAS  + SQ EF  D+ LLN+VLDELI KA +TQ++ADI ELE RDLD  DD SLLRFLIDMRGEDTTSKQLRDDLMTML+AGHETTAA+LTWTLFNL Q+    A++ +E+   +GP  R  P+FDD+P L  TRL L EALRL P  PV                    +LV+G D+FISTWNLHRSPALW  PA+Y PERFL    N  V+GW GF PR   AGLYPSE+ +DFAFLPFGGG RKCVGDQFA+MEATVTLA+L+   D  +AG   +  MVTGATIHT +GL+M A
Sbjct:   16 LLLTECYAFRASYQAPLSRRFSITLPAVQERGSSAVADRPPS----------DLQPSAPPLDE-------WEGQKYGFDWQLERARRAMVDSSHSKAPPRQGFAPFRMTPWQPAPPEQEPDILPPPSAWDSLYIIASNVAQKYFGAPSLDGAPVASVGTFTGSWSTFLQKVASGRLEDLAGGPLFLLLEKYPHQYGPVYKLAFGPRSFIVISDPVAAKHILKTNAVAYDKGMLATILEPIMGKGLIPADPQTWKVRRRAIVPGFHKRWLNRMVRLFAECNEALLDEVGRAADEGRVLDMEEKFCSVSLDIIGRAVFNYDFGSTTNESPVIKAVYRVLREAEHRSASFIPYWKLPFASRLLPSQAEFKHDLKLLNDVLDELIAKAAETQEVADIAELEGRDLDKADDSSLLRFLIDMRGEDTTSKQLRDDLMTMLVAGHETTAAVLTWTLFNLAQDAARAARVREEIATVLGP--RRAPSFDDIPKLKLTRLGLAEALRLSPSRPV--------------------RLVRGADVFISTWNLHRSPALWQEPAKYDPERFLRPHSNPGVTGWAGFDPRVGLAGLYPSEIASDFAFLPFGGGQRKCVGDQFALMEATVTLALLLHDFDLALAGAPRETRMVTGATIHTADGLRMTA 629          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: I2CNY8_NANGC (Cytochrome P450 enzyme n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CNY8_NANGC)

HSP 1 Score: 667 bits (1722), Expect = 4.410e-232
Identity = 335/532 (62.97%), Postives = 415/532 (78.01%), Query Frame = 1
Query:  373 WDTTYIILRNFGQMM-GLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLKSNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQ-RDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGSA--GRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALRRP 1956
            +D+  I L N  Q++ G   +D APVA + KY GSW  FL KV +G+LE+LAGGPLFL+L + +K+ GPVYKL FGPRSF+VVSDPVM KHVLK++   YDKGVLA IL PIMGKGLIPAD  TWK RRRAIVPGFH  WLNRM+RLF+ECA  L+ + +      +V+DME  FCS+SLDIIG+AVFNYDFGSV+ ESPVIK+VY  LREAEHRS SF+PYWKLPFA   +  Q EF  ++ LLN VL++LI +A+ + + AD+EEL   RD +A +D SLLRFL+DMRGE++TS QLRDDLMTMLIAGHET+AA+LTWTLF LV++P  LAK+  EVD  +G DG  TPT+DD+ +LL+TRLALVEALRLYPEPP++IRRAL+E  LP+GGS   G V+L+KGTD+FISTW+LHRS  LW+ P EYRP+R+L    N  V GW G+ P   +GLYP+EV  DF+FLPFGGG RKC+GDQFA+ME  V +AML++R DFT+ GT ++VGM TGATIHT+ GL+M  + R+P
Sbjct:   27 FDSCKIFLSNAYQLVTGSKGLDGAPVADVGKYNGSWTNFLAKVMSGQLEELAGGPLFLLLAKYYKKHGPVYKLMFGPRSFMVVSDPVMVKHVLKTHAYKYDKGVLAEILEPIMGKGLIPADQITWKSRRRAIVPGFHSKWLNRMVRLFSECAQVLVDKLDEEEARASVVDMETLFCSVSLDIIGKAVFNYDFGSVTSESPVIKSVYSTLREAEHRSMSFVPYWKLPFADKLLKDQVEFKANMKLLNAVLNKLIAQAVASAEKADVEELTYGRDYEATEDASLLRFLVDMRGENSTSLQLRDDLMTMLIAGHETSAAVLTWTLFELVRHPAALAKVRDEVDRVLG-DG--TPTYDDVKNLLHTRLALVEALRLYPEPPILIRRALEEDSLPEGGSGLEGGVRLLKGTDVFISTWSLHRSETLWEAPDEYRPDRWLRPTQNPGVKGWGGYEPSHMSGLYPNEVATDFSFLPFGGGARKCIGDQFAIMETAVIMAMLLQRFDFTLHGTVEEVGMRTGATIHTEGGLRMTVSRRQP 555          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: A0A7S2MJD4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MJD4_9STRA)

HSP 1 Score: 645 bits (1665), Expect = 7.480e-221
Identity = 341/634 (53.79%), Postives = 432/634 (68.14%), Query Frame = 1
Query:  172 VFDGDETDASVVLGEFVREHREWEGHEYGFDWYLEKARRGMVG---NSAGFSPLRMTFW----------------------KPTEEVVELSLWDTTYIILRNFGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLKSNVVD-YDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGS--AGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALRRPSSAVSPHVNG 1986
            ++ G   D+S    E +         + GFDW +EK RR   G   N  G    + +F+                      KP      + L+ T  +    FG  +G+ +V   P A I KY+GS+L+F+  V  G L+ LAGGPLFL+L + ++  GP++ L+FGP+SF+VVSDPVMA+H+++ + VD Y KG+LA IL PIMGKGLIPADP TWKVRRRA+VPGFHK WLN M+ LF +C D L+ E E   KS   LDMEEKFCS++LDIIG+AVFNYDFGSV++ESP++KAVYRVLREAEHRSSSFIPYW LP+A  W+  Q EF +D+ +L+++L +LI KA+ T+  A IEELE+RD   ++DPSLLRFL DMRGED +SK LRDDLMTMLIAGHETTAAMLTWTLF L + +P  L ++ +EV   M   G+  P +DD+  +   R  L+EALRLYPEPPV+IRRA  E  LP GGS  +G +K+ +GTD+FISTWNLHRSP LW+ P +Y P R+  KF N  V GW G+ P    GLYP+E  ADFAFLPFGGG RKC+GDQFAM+EATVTL+M++ + DF + G+ DDVGM TGATIHT NGL M        S  S +VNG
Sbjct:   96 IYQGVALDSSTYEAELLSSWDIDPSKQKGFDWEIEKLRRSFAGLKQNPDGSWVRQPSFFDFLVQKGRVSTVGNAQSIDEAPKPVNLADVMLLFATNILSSLGFGPALGMAAV---PDAVIQKYEGSFLSFIVGVLGGDLQTLAGGPLFLLLSKYYQVHGPIFNLSFGPKSFLVVSDPVMARHIIRDSPVDQYCKGILAEILEPIMGKGLIPADPATWKVRRRALVPGFHKRWLNNMVNLFGDCGDRLVSELETNVKSQKPLDMEEKFCSVTLDIIGKAVFNYDFGSVTKESPIVKAVYRVLREAEHRSSSFIPYWNLPYADKWMGGQVEFRRDMTMLDDILADLINKAVTTRSEATIEELEERD--NLEDPSLLRFLADMRGEDLSSKVLRDDLMTMLIAGHETTAAMLTWTLFELAKGDPGLLREVQEEVRTVMK--GKDRPDYDDIEAMKKLRFCLIEALRLYPEPPVLIRRARTEDTLPAGGSGLSGGIKVFRGTDIFISTWNLHRSPELWEDPEKYDPTRWERKFRNPGVKGWSGYDPDMMNGLYPNERAADFAFLPFGGGKRKCIGDQFAMLEATVTLSMILSKFDFELVGSPDDVGMKTGATIHTMNGLNMIV------SKASDNVNG 716          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: A0A7S4QC96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QC96_9STRA)

HSP 1 Score: 643 bits (1658), Expect = 3.280e-220
Identity = 324/563 (57.55%), Postives = 414/563 (73.53%), Query Frame = 1
Query:  259 FDWYLEKARRGMVGNSAGFSPLRMTFWKPTEEVVELSLWDTTYIILRNFGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLK-SNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGS--AGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKM 1935
            FD+ +++ R   VGN+           KP        L+ T  +    FG  +GL +V   P A I KY+GS+L+F+  V  G L+ LAGGPLFL+L + ++  GP++ L+FGP+SF++VSDPVMA+H+++ SNV DY KG+LA IL PIMG+GLIPADP TWKVRRRA+VPGFHK WLN M+ LF +C D L+ E E   ++   LDMEEKFCS++LDIIG+AVFNYDFGSV++ESP++KAVYRVLREAEHRSSSFIPYW LP+A  W+  Q EF +D+ +L+++L +LI +A+ T+  A +EELE+RD    +DPSLLRFL+DMRGED TS  LRDDLMTMLIAGHETTAAMLTWTLF L + +P  L ++  EV   M   G+  P++DDL  +   R  L+EALRLYPEPPV+IRRA KE  LP GGS  +G +K+++GTD+FISTWNLHRSP LW+ P ++ P R+  +F N  V GW+GF P    GLYP+E  ADFAFLPFGGG RKC+GDQFAM+EATVT++ML+ + DF + G+ DDVGM TGATIHT NGL M
Sbjct:  159 FDFLVQRGRVSSVGNTQSMDEAP----KPVNMADVAILFATNILSSIGFGPALGLSAV---PDAVIQKYEGSFLSFISGVLGGDLQTLAGGPLFLLLSKYYQVHGPIFNLSFGPKSFLIVSDPVMARHIIRESNVDDYCKGILAEILEPIMGQGLIPADPATWKVRRRALVPGFHKRWLNTMVNLFGDCGDRLVAELETNERTRKPLDMEEKFCSVTLDIIGKAVFNYDFGSVTKESPIVKAVYRVLREAEHRSSSFIPYWNLPYADKWMGGQVEFRRDMTMLDDILADLINRAVATRSEATVEELEERDNQ--EDPSLLRFLVDMRGEDITSNVLRDDLMTMLIAGHETTAAMLTWTLFELAKGDPGLLREVQDEVRSIMK--GKDRPSYDDLEAMKKLRYCLIEALRLYPEPPVLIRRARKEDTLPAGGSGLSGGIKVLRGTDIFISTWNLHRSPDLWEDPEKFDPTRWERQFRNPGVKGWQGFNPDLTNGLYPNERAADFAFLPFGGGKRKCIGDQFAMLEATVTMSMLINKFDFELVGSPDDVGMKTGATIHTMNGLNM 710          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: B8C8C0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8C0_THAPS)

HSP 1 Score: 635 bits (1637), Expect = 2.590e-217
Identity = 345/699 (49.36%), Postives = 454/699 (64.95%), Query Frame = 1
Query:   37 TRCAAFQTAPLSPARRSLEGTRRDRFADESCSYAARLPQPPPTSTVFDGDETDASVVLGEFVREHREWEGHEYGFDWYLEKARRGMVG-------------------------NSAGFSPLRMTFWKPTEEVVELSLWDTTYIILRN------FGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLK-SNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQNPQYLAK-IHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGS--AGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTP--RTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALRRPSSAVSPHVNGHRGEE---RGVN 2013
            T C AFQ    +P+R S+         D+       L  P    T  D D  D S    E +         + GFDW +EK RR   G                         N  G S     +  P + V   ++ D   +I +N      FG  +G+ +V   P A I KY+GS+ +F++ V  G L+ LAGGPLFL+L + ++  GP++ L+FGP+SF+V+SDPVMA+H+L+ S+   Y KG+LA IL PIMG GLIPADP+ WKVRRRA+VPGFHK WLN M+ LF +C + L+ + +A A +   +DMEE+FCS++LDIIG+AVFNYDFGSV++ESP++KAVYRVLREAEHRSSSFIPYW LP+A  W+  Q EF +D+ +L+++L +LI +A++T+  A +EELE RD+   DDPSLLRFL DMRGED TSK LRDDLMTMLIAGHETTAAMLTWT+F LV N   L K I  EV   MG   R  P +DD+  +   R AL+EALRLYPEPPV+IRRA  E  LP GGS  +G VK+++GTD+FISTWNLHR+P  W+ P +Y P R+  +F N  V GW G+ P  ++ + LYP+E+ AD+AFLPFG G RKC+GDQFAM+EA+VTLAM++ + DFT+ G+  DVGM TGATIHT NGL +  + R   + + P  N +  ++   RG+N
Sbjct:   19 TGCTAFQLPSATPSRASITKAYSTHL-DKEIKSKTPLVNPSKIYTQADIDTLDLSSYENELLAAWDTDSSLQRGFDWEIEKLRRNFAGLRQREDGQWVRKPSLFDFLVTNTPSNVVGVSNTGERYESPPKPV---NMLDVGLLITKNLLNTLGFGPSLGMAAV---PDAVIQKYEGSFFSFIKGVLGGDLQTLAGGPLFLLLAKYYQDYGPIFNLSFGPKSFLVISDPVMARHILRDSSPEQYCKGMLAEILEPIMGDGLIPADPKIWKVRRRAVVPGFHKKWLNNMVTLFGDCGERLVNDLDARATAKTPVDMEERFCSVTLDIIGKAVFNYDFGSVTKESPIVKAVYRVLREAEHRSSSFIPYWDLPYADKWMGGQVEFRKDMGMLDDILTKLINRAIETRDEASVEELEDRDVG--DDPSLLRFLADMRGEDLTSKVLRDDLMTMLIAGHETTAAMLTWTVFGLVSNDSGLMKEIQAEVRTVMGDKLR--PDYDDIAKMKKMRYALIEALRLYPEPPVLIRRARSEDNLPAGGSGLSGGVKVLRGTDIFISTWNLHRAPEYWENPEKYDPTRWERRFKNPGVKGWNGYDPEKQSESSLYPNEITADYAFLPFGAGKRKCIGDQFAMLEASVTLAMIINKFDFTLVGSPKDVGMKTGATIHTMNGLNLVVSRRSEDNPI-PETNDYWIQQHLSRGLN 705          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: A0A7S2KNF0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KNF0_9STRA)

HSP 1 Score: 632 bits (1631), Expect = 1.500e-216
Identity = 339/639 (53.05%), Postives = 438/639 (68.54%), Query Frame = 1
Query:  256 GFDWYLEKARRGMVG-----------------------------NSAGFSPLRMTFWKPTEEVVELSLWDTTYIILRNFGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLKSNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGSAGR--VKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALRRPSSAVSPHVNGHRGEE----RGVNGAKLDCTAEMTTVTSKA 2064
            GFDW +EK RR   G                             NSA  S  R    +P      + L+    +    FG ++G+ +V   P A I KY+GS+L+F+  V  G L+ LAGGPLFL+L + +K  GP++ L+FGP+SF+VVSDPVMAKH+LKS+   Y KG+LA IL PIMGKGLIPADPETWKVRRRAIVPGFHK WLNRM+ LF + A  L  E +  A + A +DMEE+FCS++LDIIG++VFNYDFGSV++ESP++KAVYR LREAEHRSSSFIPYW LP+A  W+  Q EF  D+ +L+++L +LI +A+ T+Q A +EELE+R+ +  +DPSLLRFL+DMRGED +SKQLRDDLMTMLIAGHETTAAMLTWTLF L Q +P  +  I  E+   MG   R  P +DD+ ++   R AL+EALRLYPEPPV+IRRA  E  LP GGS  +  +K+++GTD+FISTWNLHRS  LW+ P ++ P R+   F NK V GW+G++P   +GLYP+E+ +DFAFLPFGGG RKCVGDQFA+MEATVT+A+++   DFT  G+  DVGM TGATIHT NGL M   LR+ ++  +P V+    E+    RG+    +   +E   V  K+
Sbjct:   80 GFDWEMEKMRRYFAGLRMREDGTWVKRPGPLDFLVSSVSVEVDANSASGS--RKDQPRPVTAKTIVKLFTFNILTSLGFGPLLGMSAV---PDAVIQKYEGSFLSFIIGVLGGDLQTLAGGPLFLLLAKYYKDYGPIFNLSFGPKSFLVVSDPVMAKHILKSSPDAYCKGMLAEILEPIMGKGLIPADPETWKVRRRAIVPGFHKRWLNRMVDLFGDSAVRLSGELDRVASAKAAVDMEERFCSVTLDIIGKSVFNYDFGSVTKESPIVKAVYRTLREAEHRSSSFIPYWNLPYADQWMGGQVEFRNDMKMLDDILADLINRAVITRQEATVEELEERENE--NDPSLLRFLVDMRGEDLSSKQLRDDLMTMLIAGHETTAAMLTWTLFELSQGDPGMIRDIQVEIRSIMGTKER--PDYDDIVEMKRLRFALIEALRLYPEPPVLIRRARLEDNLPAGGSGLKDGIKVLRGTDIFISTWNLHRSEELWENPEKFDPTRWERPFRNKGVEGWEGYSPDRISGLYPNEIASDFAFLPFGGGKRKCVGDQFAVMEATVTMAIMLNNFDFTFTGSPADVGMKTGATIHTMNGLNMY--LRKRTTDDAPLVSEGWWEQQHLSRGLRADGMPYNSEEDAVWEKS 707          
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Match: A0A7S3PU02_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PU02_9STRA)

HSP 1 Score: 631 bits (1627), Expect = 1.570e-215
Identity = 331/610 (54.26%), Postives = 427/610 (70.00%), Query Frame = 1
Query:  241 EGHEYGFDWYLEKARR---GMVGNSAGFSPLRMTFW--------------KPTEEVVE-LSLWDTTYIILRN------FGQMMGLPSVDNAPVAKIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGPRSFIVVSDPVMAKHVLK-SNVVDYDKGVLASILAPIMGKGLIPADPETWKVRRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCSLSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPFASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAIDDPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQ-NPQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPVIIRRALKETELPQGGSAGR--VKLVKGTDLFISTWNLHRSPALWDRPAEYRPERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGDQFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALRRPSSAVSPHVNG 1986
            EG + GFDW +EK RR   G+  N+ G    R + +              +P +E  + + + D  Y+ L N      FG  +GL  V   P   I KY+GS+ +F++    G L+ LAGGPLFL+L + ++  GP++ L+FGP+SF+V++DPVMA+H+L+ S+   Y KG+LA IL PIMG+GLIPADP+TWKVRRRAIVPGFH+ WLNRM+ LF +C D LI +    +K    +DMEE+FCS++LDIIG++VFNYDFGS ++ESPV+KAVYRVLREAEHRSSSFIPYW LP+A  W+  Q EF +D+ +L+++L  LI +A++T++ A +EELE+RD     DPSLLRFL DMRGED TSK LRDDLMTMLIAGHETTAAMLTWTLF L Q +P  + +I  EV   +  DG+  P +DD+  +   R +L+EALRLYPEPP++IRRA     LP GGS+ R  VK+++GTD+FISTWNLHRSP LWD P ++ P R+   F N  V+GW G+ P    GLYP+E+  D AFLPFGGG RKCVGDQFAMMEATVT++ML+ + DF  +G  +DVGM TGATIHT NGL M     R SS V P  NG
Sbjct:  134 EGRQNGFDWEIEKMRRTVSGLQQNADGSWARRPSIFDFLVSKSEFSTATARPLDEPPKPVEITDVMYLFLTNTLRQVGFGDALGLAKV---PDVVIQKYEGSFFSFIKGALGGDLQTLAGGPLFLLLAKYYQEYGPIFNLSFGPKSFLVINDPVMARHILRESSPEQYCKGMLAEILEPIMGEGLIPADPKTWKVRRRAIVPGFHRRWLNRMIVLFGDCGDRLIDDLAVRSKKKTAVDMEERFCSVTLDIIGKSVFNYDFGSTTKESPVVKAVYRVLREAEHRSSSFIPYWNLPYADKWMGGQVEFRRDMTMLDDILANLINRAVETRKEATVEELEERD--NASDPSLLRFLADMRGEDLTSKVLRDDLMTMLIAGHETTAAMLTWTLFELSQADPGMMKEIQAEVRTVL--DGKDRPDYDDIVAMKKLRYSLIEALRLYPEPPILIRRARTADSLPPGGSSLRDGVKVLRGTDIFISTWNLHRSPELWDNPEKFDPTRWERPFKNPSVTGWNGYNPEKVTGLYPNEIATDCAFLPFGGGQRKCVGDQFAMMEATVTMSMLLNKYDFDFSGKPEDVGMKTGATIHTVNGLNM---YPRESSGV-PETNG 732          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1613.3916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K058_9PHAE0.000e+078.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G594_ECTSI0.000e+080.00Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835ZEV7_9STRA8.140e-28270.32Cytochrome P450 n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A835YS73_9STRA1.900e-25860.80Cytochrome P450 n=1 Tax=Tribonema minus TaxID=3033... [more]
I2CNY8_NANGC4.410e-23262.97Cytochrome P450 enzyme n=1 Tax=Nannochloropsis gad... [more]
A0A7S2MJD4_9STRA7.480e-22153.79Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4QC96_9STRA3.280e-22057.55Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
B8C8C0_THAPS2.590e-21749.36Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2KNF0_9STRA1.500e-21653.05Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3PU02_9STRA1.570e-21554.26Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1613contigH-elongata_contig1613:10211..14954 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1031.6
Seed ortholog evalue1.7e-298
Seed eggNOG ortholog2880.D7G594
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.cytochrome p450
EggNOG OGsCOG2124@1,KOG0157@2759
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionCytochrome P450
Ec32 orthologEc-14_006690.1
Exons4
Model size2091
Cds size2091
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1613.3916.1prot_H-elongata_contig1613.3916.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1613 10211..14954 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929945.699854-CDS-H-elongata_contig1613:10210..107811622929945.699854-CDS-H-elongata_contig1613:10210..10781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 10211..10781 +
1691679218.5281792-CDS-H-elongata_contig1613:10210..107811691679218.5281792-CDS-H-elongata_contig1613:10210..10781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 10211..10781 +
1622929945.7471468-CDS-H-elongata_contig1613:12254..123731622929945.7471468-CDS-H-elongata_contig1613:12254..12373Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 12255..12373 +
1691679218.5377069-CDS-H-elongata_contig1613:12254..123731691679218.5377069-CDS-H-elongata_contig1613:12254..12373Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 12255..12373 +
1622929945.7604365-CDS-H-elongata_contig1613:13392..137431622929945.7604365-CDS-H-elongata_contig1613:13392..13743Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 13393..13743 +
1691679218.5456219-CDS-H-elongata_contig1613:13392..137431691679218.5456219-CDS-H-elongata_contig1613:13392..13743Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 13393..13743 +
1622929945.7759025-CDS-H-elongata_contig1613:13904..149541622929945.7759025-CDS-H-elongata_contig1613:13904..14954Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 13905..14954 +
1691679218.562355-CDS-H-elongata_contig1613:13904..149541691679218.562355-CDS-H-elongata_contig1613:13904..14954Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1613 13905..14954 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1613.3916.1

>prot_H-elongata_contig1613.3916.1 ID=prot_H-elongata_contig1613.3916.1|Name=mRNA_H-elongata_contig1613.3916.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=697bp
LLASIATGGLLLTRCAAFQTAPLSPARRSLEGTRRDRFADESCSYAARLP
QPPPTSTVFDGDETDASVVLGEFVREHREWEGHEYGFDWYLEKARRGMVG
NSAGFSPLRMTFWKPTEEVVELSLWDTTYIILRNFGQMMGLPSVDNAPVA
KIPKYKGSWLTFLRKVTNGRLEDLAGGPLFLMLEELFKREGPVYKLAFGP
RSFIVVSDPVMAKHVLKSNVVDYDKGVLASILAPIMGKGLIPADPETWKV
RRRAIVPGFHKAWLNRMMRLFAECADTLIVEAEAAAKSGAVLDMEEKFCS
LSLDIIGRAVFNYDFGSVSQESPVIKAVYRVLREAEHRSSSFIPYWKLPF
ASSWIDSQREFAQDINLLNNVLDELIQKALDTQQMADIEELEQRDLDAID
DPSLLRFLIDMRGEDTTSKQLRDDLMTMLIAGHETTAAMLTWTLFNLVQN
PQYLAKIHQEVDMCMGPDGRHTPTFDDLPDLLYTRLALVEALRLYPEPPV
IIRRALKETELPQGGSAGRVKLVKGTDLFISTWNLHRSPALWDRPAEYRP
ERFLSKFHNKDVSGWKGFTPRTAAGLYPSEVDADFAFLPFGGGNRKCVGD
QFAMMEATVTLAMLVRRLDFTMAGTADDVGMVTGATIHTKNGLKMKAALR
RPSSAVSPHVNGHRGEERGVNGAKLDCTAEMTTVTSKAGGKVVRSSL
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mRNA from alignment at H-elongata_contig1613:10211..14954+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1613.3916.1 ID=mRNA_H-elongata_contig1613.3916.1|Name=mRNA_H-elongata_contig1613.3916.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4744bp|location=Sequence derived from alignment at H-elongata_contig1613:10211..14954+ (Himanthalia elongata Himel1 dioecious)
CTGTTGGCGTCGATTGCAACGGGAGGCCTACTTCTCACCAGATGCGCGGC GTTTCAGACAGCCCCCCTGTCACCTGCCAGGCGGTCTCTCGAAGGCACGC GCCGCGACCGCTTTGCCGATGAGTCGTGTTCCTATGCAGCGCGCCTACCC CAACCCCCGCCAACATCTACCGTATTTGACGGCGACGAGACTGATGCAAG CGTGGTTCTGGGCGAGTTCGTCCGAGAACACCGTGAATGGGAAGGACACG AATACGGGTTTGACTGGTATTTGGAGAAAGCCAGGAGAGGGATGGTGGGT AATTCTGCAGGGTTCAGTCCCCTGCGCATGACCTTTTGGAAACCAACGGA GGAGGTGGTTGAACTGAGTTTGTGGGACACGACGTACATTATCCTCCGAA ACTTTGGCCAGATGATGGGGCTACCGTCGGTGGATAACGCTCCGGTCGCC AAGATTCCGAAATACAAGGGGAGCTGGCTGACGTTCCTCCGTAAGGTGAC GAATGGACGGCTCGAGGACCTGGCGGGAGGGCCGCTGTTCCTCATGCTGG AAGAACTCTTCAAAAGGGAAGGTGAACGCTGTATCATGATATTACCGATT TCGCAGGCAGTCGTCGGGTTAGGCCAAAAAAGAGCTACTGTATACGGGTC GATTCAAGTCGACCTGCACAAATTATGGGATGGGCGTCGATATGCAGTGT GAGGCCTAGTACTTGAGCTCTTATTGATACTGCTAATAGTACCTGCTGCT CGCACGAGACACAACAAAGCAAGTATCTCGGGCAAGAATAATTCGATTTC AGTGATGTCATCTCCTTTATATGATATCATCATTCAACTTGATTGTTGGA GGTGTAGGTTTAACCCCTTCTCCGAGTTTTCTTCTATTATAGTGGTGCGC AGCTTACCGTTCATTCTCGAGATGAGGATATGTTATGCTGGCTTTCATTG TTCGCAAAGCGACTCCGCCCCCAACGTTAAATCGGTGGGATATACTGTAG CCATCGCCCCATCTTGGCAGTGTGTCTATTAGCTCTCATCACTGTAGTTT TTCCAGTAAACAAGGTACCAAATAGAGCAGTATATTGTGTACTCTAGCGT GAACAATACGTTGCATACATACATCTAAATATATCTATATTCCTCTTAGA TCTACACGGCTCTCGTCTCTGCCTTGGCACAACAGTATCGTACCGTAACG TTCGTCTCCCGAAAACGACGCGGATGGGTTGATGGAAAACCTGCCATCTT ATCTTTAAATAGCATGTCTATGAAATAGAAGGAAACATCTTCAAAGAGCA TAGTCCACTATCATGTCCCCAAAATTTTCGCCGAAGTCTAGTGTAGTACC GCACACAAGGAAAAGGTGCTGCTCCAATCTGGTCCGAGGAGGCAACCCAC TCAGCTGGGGCTTGCCATACCCTACCAATCCCGGGTCTAATTGGAGCTAT AATAAACGTTTTGTGAGGAAGATACTATGATCTCCAATCAACATTATCCA AGGCACGGTTAGCTGTGCGTGCCGATTTGCCGTCGGATTGAGCTCGGAGA GAGGCGGTGGGTTTGTGCAGTATATCAACGAAGTGCCGTACCCCGTCATC GAGGCAGGTTCGTGTTATTTTCAGCTCCACTAATTTTCTACTACTCTCCA GTTCCTTTGGCAAGAATGCTGGCGAACCTATCGCGAGGAGTGCCATTCAA GAAAAGCCTCGGAACGCTTCGAATTCCCCCTACCGTGGCGAAATCAGCTG GATCGATCCTTCCTCTGCCAAGTAGAAGAGCTATTAATAATATTATATGT TAACTTACCGAGGTGTTAGTTGATACATTGAAATATTAGTAGTACTTTTG CTTGTCGGCAGAGCCCGCCATTACTCTCGAACCGCAGACGTGAAACAATA AACGATACGCGTCCTACCTTCACTGCCGACTTTATCTGCATCTCTCCTCA CGCCATCCCTCTGTTGTGTGATTCTTTCTCTGTTTGTGTCTCTCGGGCAC AACTTCTGGGAAAATGCGCCGGCAAACTACTACGATGTTACAAGGGCCGG TTTACAAGTTGGCCTTCGGACCGCGGTCATTCATCGTAGTCTCCGACCCC GTCATGGCGAAGCACGTCCTTAAATCCAATGTTGTAGATTACGATAAGGG AGTGCTCGCATCGGTGAGTCTAGGCGCAGATCTATAATGTAAAATAGCAG GCCGAAATGAGGCGAGTTGGTCTTCCGCCCATTCTTTTTCTGTCGTTTGG CCTGTATATCGGTCGAAACTCTCTTACAGAGAGCACGAGCTGGGAGACAA GCATAAGCATAAACCAGTGAAACTGGTTGGCAGTCGTGATATCGTATGAT ACTCAATACTTTATGATACTAAATTACTGAACGGGATTCGCTACCCGGTA CATTACTCGAGGCGTCGCCCGAGTAGTCTCACTGGTAGCCATATAAATCA GTAGTGTAGAGGTCGCGAGCTCGATTCTGTTAAGGGTGGGTTTCTCCTGG TTTTGTAACGGAAAGCATGAGAACTGCTGCAAAGTTCAGCCATACAGTAC CGGTAGTTTTATATGTAGATTTAACCGGCGGTTTGGAGTAAAGGAGTGAT GTTCATAACTTACTGCATCGATAGCGATACATATTGATGTATGATATATA CTATAGGCTATAGGAGACGTGAATCAGCCGGGGAGATATTATAGAGGTGT TGAGATAAACCCCTTGGGACCACAGACTGTAAGGGAGGATGTGTTATAGA GGATGGACAACGTTGCAGTAGGAGGAATTGGTTCACCTAGCACGTTGAAT GAATTACATTATATACTGTAAATAGTATATAATATAATAAGATAACAGTA TAAAATATAGTATAACCCATAAGCAAAAAGTGATAATAAAAAACAAAGTC ATGTTATTAAGTATTAATAGCTGCAGTAATACCCAAGTATACTTCATGTA CAGCACCGGTAAATCTGCAACGAGTGTTTTTGATTCTTACGTTTATACCG GAGGAAGAAGTAAGCTCGGTGACGGAAGGGCATTCACTCCGTCGATGTCC GTGAGATGCCGACTGTAAATGTCGGACTCGAGGAAGCTTACCTCGTATCT TACTCTCTTGGGTGAAGCGTAACCGATGCCTCATGTGTTCACTTTATAGC GCTTACGCCGTCCTTTTATCGCTTCCCGTCAGATTCTGGCGCCGATCATG GGAAAGGGACTGATCCCCGCAGATCCGGAAACGTGGAAGGTTCGACGACG AGCGATCGTGCCTGGGTTCCACAAGGCATGGCTCAACCGTATGATGCGGC TCTTCGCGGAGTGTGCTGATACGCTTATCGTGGAGGCGGAAGCAGCGGCG AAGTCAGGGGCTGTGTTGGACATGGAGGAAAAGTTCTGCTCTTTATCACT CGACATTATCGGCAGAGCGGTGTTCAACTATGATTTCGGATCGGTGTCAC AAGAGTCGCCGGTGATCAAGGCCGTTTACCGCGTGTTGAGGGAAGCGGAG CACCGCTCGAGCTCGTTCATTCCATACTGGAAGGTCAGTTGTTGTCGTTT GGTTCTTGTGGTGGTACTGTATACCAGAGCCAGATAAGGATGGTGAATAA ATCGAAATGACTTGATCGCGTTGCGCACAGCGCACGAAATGACAAGTTCC TCTTACCCCCGGTCTAATGCGAACTACAATTTCCACTCGAGCAGCTTCCG TTTGCAAGTTCGTGGATCGACAGCCAAAGGGAGTTCGCTCAAGATATTAA CCTCCTCAACAACGTCCTGGACGAGCTGATCCAGAAGGCGCTCGACACCC AGCAGATGGCAGACATCGAGGAGCTGGAGCAGCGGGACCTCGACGCGATA GATGACCCCAGTCTTCTACGTTTCCTCATCGACATGCGCGGGGAGGACAC AACGAGCAAACAACTGCGCGACGATCTAATGACGATGTTGATCGCGGGTC ACGAAACCACTGCGGCCATGCTCACGTGGACGCTCTTCAATCTGGTGCAG AACCCTCAATACTTGGCAAAGATCCACCAGGAGGTGGACATGTGTATGGG TCCCGACGGGAGGCATACACCTACGTTCGACGACCTCCCTGACCTGTTGT ACACTCGTCTGGCGCTTGTCGAGGCCCTCCGCCTGTATCCCGAGCCTCCC GTGATCATCCGGCGGGCGCTGAAGGAAACGGAGCTTCCGCAAGGGGGAAG TGCCGGTCGCGTGAAGCTAGTGAAGGGCACTGATCTGTTCATCTCCACCT GGAACCTCCATCGCAGCCCGGCGCTGTGGGATCGCCCTGCGGAGTATCGT CCCGAACGATTTTTGTCGAAGTTCCACAACAAAGACGTTTCGGGATGGAA AGGATTCACCCCGAGGACCGCGGCAGGGCTGTACCCGAGCGAGGTGGATG CTGACTTCGCTTTCTTGCCTTTCGGCGGCGGAAACCGGAAATGTGTTGGA GACCAGTTCGCCATGATGGAGGCTACGGTTACCCTGGCGATGCTAGTGCG AAGGCTTGACTTCACCATGGCGGGCACGGCGGACGACGTCGGTATGGTGA CGGGAGCGACGATTCACACAAAAAACGGGCTTAAGATGAAGGCGGCTCTA CGGCGCCCATCTTCTGCCGTGTCGCCTCATGTCAACGGACACAGAGGCGA GGAACGTGGCGTGAACGGTGCGAAGCTGGACTGCACGGCAGAGATGACGA CGGTGACCTCCAAGGCGGGGGGGAAAGTTGTTAGGAGCTCGCTG
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Coding sequence (CDS) from alignment at H-elongata_contig1613:10211..14954+

>mRNA_H-elongata_contig1613.3916.1 ID=mRNA_H-elongata_contig1613.3916.1|Name=mRNA_H-elongata_contig1613.3916.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4182bp|location=Sequence derived from alignment at H-elongata_contig1613:10211..14954+ (Himanthalia elongata Himel1 dioecious)
CTGTTGGCGTCGATTGCAACGGGAGGCCTACTTCTCACCAGATGCGCGGC
GTTTCAGACAGCCCCCCTGTCACCTGCCAGGCGGTCTCTCGAAGGCACGC
GCCGCGACCGCTTTGCCGATGAGTCGTGTTCCTATGCAGCGCGCCTACCC
CAACCCCCGCCAACATCTACCGTATTTGACGGCGACGAGACTGATGCAAG
CGTGGTTCTGGGCGAGTTCGTCCGAGAACACCGTGAATGGGAAGGACACG
AATACGGGTTTGACTGGTATTTGGAGAAAGCCAGGAGAGGGATGGTGGGT
AATTCTGCAGGGTTCAGTCCCCTGCGCATGACCTTTTGGAAACCAACGGA
GGAGGTGGTTGAACTGAGTTTGTGGGACACGACGTACATTATCCTCCGAA
ACTTTGGCCAGATGATGGGGCTACCGTCGGTGGATAACGCTCCGGTCGCC
AAGATTCCGAAATACAAGGGGAGCTGGCTGACGTTCCTCCGTAAGGTGAC
GAATGGACGGCTCGAGGACCTGGCGGGAGGGCCGCTGTTCCTCATGCTGG
AAGAACTCTTCAAAAGGGAAGCTGTTGGCGTCGATTGCAACGGGAGGCCT
ACTTCTCACCAGATGCGCGGCGTTTCAGACAGCCCCCCTGTCACCTGCCA
GGCGGTCTCTCGAAGGCACGCGCCGCGACCGCTTTGCCGATGAGTCGTGT
TCCTATGCAGCGCGCCTACCCCAACCCCCGCCAACATCTACCGTATTTGA
CGGCGACGAGACTGATGCAAGCGTGGTTCTGGGCGAGTTCGTCCGAGAAC
ACCGTGAATGGGAAGGACACGAATACGGGTTTGACTGGTATTTGGAGAAA
GCCAGGAGAGGGATGGTGGGTAATTCTGCAGGGTTCAGTCCCCTGCGCAT
GACCTTTTGGAAACCAACGGAGGAGGTGGTTGAACTGAGTTTGTGGGACA
CGACGTACATTATCCTCCGAAACTTTGGCCAGATGATGGGGCTACCGTCG
GTGGATAACGCTCCGGTCGCCAAGATTCCGAAATACAAGGGGAGCTGGCT
GACGTTCCTCCGTAAGGTGACGAATGGACGGCTCGAGGACCTGGCGGGAG
GGCCGCTGTTCCTCATGCTGGAAGAACTCTTCAAAAGGGAAGGGCCGGTT
TACAAGTTGGCCTTCGGACCGCGGTCATTCATCGTAGTCTCCGACCCCGT
CATGGCGAAGCACGTCCTTAAATCCAATGTTGTAGATTACGATAAGGGAG
TGCTCGCATCGGGCCGGTTTACAAGTTGGCCTTCGGACCGCGGTCATTCA
TCGTAGTCTCCGACCCCGTCATGGCGAAGCACGTCCTTAAATCCAATGTT
GTAGATTACGATAAGGGAGTGCTCGCATCGATTCTGGCGCCGATCATGGG
AAAGGGACTGATCCCCGCAGATCCGGAAACGTGGAAGGTTCGACGACGAG
CGATCGTGCCTGGGTTCCACAAGGCATGGCTCAACCGTATGATGCGGCTC
TTCGCGGAGTGTGCTGATACGCTTATCGTGGAGGCGGAAGCAGCGGCGAA
GTCAGGGGCTGTGTTGGACATGGAGGAAAAGTTCTGCTCTTTATCACTCG
ACATTATCGGCAGAGCGGTGTTCAACTATGATTTCGGATCGGTGTCACAA
GAGTCGCCGGTGATCAAGGCCGTTTACCGCGTGTTGAGGGAAGCGGAGCA
CCGCTCGAGCTCGTTCATTCCATACTGGAAGATTCTGGCGCCGATCATGG
GAAAGGGACTGATCCCCGCAGATCCGGAAACGTGGAAGGTTCGACGACGA
GCGATCGTGCCTGGGTTCCACAAGGCATGGCTCAACCGTATGATGCGGCT
CTTCGCGGAGTGTGCTGATACGCTTATCGTGGAGGCGGAAGCAGCGGCGA
AGTCAGGGGCTGTGTTGGACATGGAGGAAAAGTTCTGCTCTTTATCACTC
GACATTATCGGCAGAGCGGTGTTCAACTATGATTTCGGATCGGTGTCACA
AGAGTCGCCGGTGATCAAGGCCGTTTACCGCGTGTTGAGGGAAGCGGAGC
ACCGCTCGAGCTCGTTCATTCCATACTGGAAGCTTCCGTTTGCAAGTTCG
TGGATCGACAGCCAAAGGGAGTTCGCTCAAGATATTAACCTCCTCAACAA
CGTCCTGGACGAGCTGATCCAGAAGGCGCTCGACACCCAGCAGATGGCAG
ACATCGAGGAGCTGGAGCAGCGGGACCTCGACGCGATAGATGACCCCAGT
CTTCTACGTTTCCTCATCGACATGCGCGGGGAGGACACAACGAGCAAACA
ACTGCGCGACGATCTAATGACGATGTTGATCGCGGGTCACGAAACCACTG
CGGCCATGCTCACGTGGACGCTCTTCAATCTGGTGCAGAACCCTCAATAC
TTGGCAAAGATCCACCAGGAGGTGGACATGTGTATGGGTCCCGACGGGAG
GCATACACCTACGTTCGACGACCTCCCTGACCTGTTGTACACTCGTCTGG
CGCTTGTCGAGGCCCTCCGCCTGTATCCCGAGCCTCCCGTGATCATCCGG
CGGGCGCTGAAGGAAACGGAGCTTCCGCAAGGGGGAAGTGCCGGTCGCGT
GAAGCTAGTGAAGGGCACTGATCTGTTCATCTCCACCTGGAACCTCCATC
GCAGCCCGGCGCTGTGGGATCGCCCTGCGGAGTATCGTCCCGAACGATTT
TTGTCGAAGTTCCACAACAAAGACGTTTCGGGATGGAAAGGATTCACCCC
GAGGACCGCGGCAGGGCTGTACCCGAGCGAGGTGGATGCTGACTTCGCTT
TCTTGCCTTTCGGCGGCGGAAACCGGAAATGTGTTGGAGACCAGTTCGCC
ATGATGGAGGCTACGGTTACCCTGGCGATGCTAGTGCGAAGGCTTGACTT
CACCATGGCGGGCACGGCGGACGACGTCGGTATGGTGACGGGAGCGACGA
TTCACACAAAAAACGGGCTTAAGATGAAGGCGGCTCTACGGCGCCCATCT
TCTGCCGTGTCGCCTCATGTCAACGGACACAGAGGCGAGGAACGTGGCGT
GAACGGTGCGAAGCTGGACTGCACGGCAGAGATGACGACGGTGACCTCCA
AGGCGGGGGGGAAAGTTGTTAGGAGCTCGCTGCTTCCGTTTGCAAGTTCG
TGGATCGACAGCCAAAGGGAGTTCGCTCAAGATATTAACCTCCTCAACAA
CGTCCTGGACGAGCTGATCCAGAAGGCGCTCGACACCCAGCAGATGGCAG
ACATCGAGGAGCTGGAGCAGCGGGACCTCGACGCGATAGATGACCCCAGT
CTTCTACGTTTCCTCATCGACATGCGCGGGGAGGACACAACGAGCAAACA
ACTGCGCGACGATCTAATGACGATGTTGATCGCGGGTCACGAAACCACTG
CGGCCATGCTCACGTGGACGCTCTTCAATCTGGTGCAGAACCCTCAATAC
TTGGCAAAGATCCACCAGGAGGTGGACATGTGTATGGGTCCCGACGGGAG
GCATACACCTACGTTCGACGACCTCCCTGACCTGTTGTACACTCGTCTGG
CGCTTGTCGAGGCCCTCCGCCTGTATCCCGAGCCTCCCGTGATCATCCGG
CGGGCGCTGAAGGAAACGGAGCTTCCGCAAGGGGGAAGTGCCGGTCGCGT
GAAGCTAGTGAAGGGCACTGATCTGTTCATCTCCACCTGGAACCTCCATC
GCAGCCCGGCGCTGTGGGATCGCCCTGCGGAGTATCGTCCCGAACGATTT
TTGTCGAAGTTCCACAACAAAGACGTTTCGGGATGGAAAGGATTCACCCC
GAGGACCGCGGCAGGGCTGTACCCGAGCGAGGTGGATGCTGACTTCGCTT
TCTTGCCTTTCGGCGGCGGAAACCGGAAATGTGTTGGAGACCAGTTCGCC
ATGATGGAGGCTACGGTTACCCTGGCGATGCTAGTGCGAAGGCTTGACTT
CACCATGGCGGGCACGGCGGACGACGTCGGTATGGTGACGGGAGCGACGA
TTCACACAAAAAACGGGCTTAAGATGAAGGCGGCTCTACGGCGCCCATCT
TCTGCCGTGTCGCCTCATGTCAACGGACACAGAGGCGAGGAACGTGGCGT
GAACGGTGCGAAGCTGGACTGCACGGCAGAGATGACGACGGTGACCTCCA
AGGCGGGGGGGAAAGTTGTTAGGAGCTCGCTG
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