mRNA_H-elongata_contig16031.3872.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16031.3872.1
Unique NamemRNA_H-elongata_contig16031.3872.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE)

HSP 1 Score: 747 bits (1928), Expect = 2.080e-260
Identity = 407/568 (71.65%), Postives = 446/568 (78.52%), Query Frame = 1 
Query:    4 ASRRVQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTLGVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWS-PGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCAR----GFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTALSVADVLLAPTTPFPPFLS-GPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDT--GSGRVDTLETQGGTNGVGGEGHGS--CLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERVKNAR 1677
            ASR+VQ G+VRPSEL EAC+ Q++RSSWLNCFV RC   AR EA AADARQANG L GPLDGIPYAAKDNFCTLGV TTASSAALAGFTPPYDSTPT RLRQAGS L+GKTNMDEFGMGSG LFS +GRTLNPWS   P       A  +VPGGSSGGSAAAVSSG  F ALGSDTGGSVR PAAFCGVVG+KPTYGL+PRHGLIAYASSLDTPG+LARSVLD+AMVLDV+AGPD KDSTC+P G       GFAS LLK      +    LEG+TVG+PKEFNVEELD G R AWE+  R AAALGA V+EVS+ SVPQAL AYAVLASAEASSNLSRYDGLRYG R G    S G+G       G+FRDQG LH EITRTRTA FGDEVKRRILTGCFVLCESAYHDYYELAI++++RLRREM  ALS ADVLLAPTTPFPPF S GPP+DP +LLLNDVLTVPISL G+PA+SIPV T P +  T   V   +   S R     + G   GVG    G+  C LPLG+QI GRPLGE A+L+VAH LE +LDFASQVPERV+  R
Sbjct:   13 ASRKVQEGDVRPSELAEACIKQIERSSWLNCFVTRCFNSARLEAGAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQAGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSRESPGDEENTEAPFFVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSVLDAAMVLDVVAGPDPKDSTCIPAGKGHAGGGGFASDLLKAAAAGSSSSWPLEGVTVGIPKEFNVEELDVGVREAWENTARTAAALGATVVEVSMSSVPQALAAYAVLASAEASSNLSRYDGLRYGARTGQTAASRGEGAAV-CGGGIFRDQGELHAEITRTRTAYFGDEVKRRILTGCFVLCESAYHDYYELAIEVRKRLRREMRAALSEADVLLAPTTPFPPFPSCGPPADPASLLLNDVLTVPISLTGVPAVSIPVATTPTARRTTPAVTSTSCCSSDRGGAGXSGGAEAGVGAAAPGAEHCRLPLGMQIIGRPLGEAAMLRVAHELESRLDFASQVPERVREPR 579
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI)

HSP 1 Score: 603 bits (1554), Expect = 5.950e-206
Identity = 318/417 (76.26%), Postives = 343/417 (82.25%), Query Frame = 1 
Query:    1 QASRRVQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTLGVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSP-GPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCAR----GFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIK 1236
            +ASR+VQ G+VRPSEL EAC+ QM+RSSWLNCFV RC + AR EAEAADARQANG L GPLDGIPYAAKDNFCTLGV TTASSAALAGFTPPYDSTPT RLRQ GS L+GKTNMDEFGMGSG LFS +GRTLNPWSP  P       A   VPGGSSGGSAAAVSSG  F ALGSDTGGSVR PAAFCGVVG+KPTYGL+PRHGLIAYASSLDTPG+LARS+LD+AMVLDV+AGPDS+DSTC+P G  R    GFAS LL       +    LEG+TVG+PKEFNVEELDAG R AWE+  R AAALGA V+EV +PSVPQAL AYAVLASAEASSNLSRYDGLRYG R G    S G+G   G   G+FRDQG LH EITRTRTA FGDEVKRRILTGCFVLCESAYHDYYELAI+
Sbjct:   33 EASRKVQEGDVRPSELAEACIKQMERSSWLNCFVTRCFDSARLEAEAADARQANGTLTGPLDGIPYAAKDNFCTLGVQTTASSAALAGFTPPYDSTPTGRLRQVGSILMGKTNMDEFGMGSGTLFSEYGRTLNPWSPESPGDEKNTEAPFLVPGGSSGGSAAAVSSGCSFAALGSDTGGSVRQPAAFCGVVGLKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGPDSRDSTCIPAGKGRAGGGGFASDLLGAAAAGSSSSWPLEGVTVGIPKEFNVEELDAGVREAWENTARTAAALGAAVVEVFMPSVPQALAAYAVLASAEASSNLSRYDGLRYGARTGQTAASRGEGAAVGG-GGIFRDQGELHAEITRTRTAYFGDEVKRRILTGCFVLCESAYHDYYELAIE 448
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA)

HSP 1 Score: 442 bits (1137), Expect = 2.850e-141
Identity = 267/558 (47.85%), Postives = 339/558 (60.75%), Query Frame = 1 
Query:   16 VQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTLGVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGL-LEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHAL----DSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTALSVADVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERVKNA 1674
            ++ G   P  + + CL++   +S LN FV      A  EA  A        + GPL GIP A KDNFCT GV TTASS  LA F PPY +T   RL  +G+ ++GKTNMDEFGMGS  LFS  G+T+NPWS    A    +      GGSSGGSA AV++G+   ALGSDTGGSVR PAAFCG+VG+KPTYG V RHGLIAYASSLD PG+L R+V D+A+VLDV+AG D  DSTCL       F   +      R AG  + L GL VG+P EF ++EL+  A  AWE   R+    GA+V+ VS+PS+P AL  Y V+A AEASSNL+RYDG+R+G R   +L      EG G  +  E     DQ  LH+ IT +R+  FGDEV+RR+++GC VL   AY  YYE A+  + RLRREM+TALS  DVLL P TP  PF    P++P AL++NDV+TVP SLAGLPAI++PV   P+S               V  L                  +P+G+Q+ GR L E  +L VA ALE + +F+ ++P+ V  A
Sbjct:   86 IRKGNADPFSVMQRCLSRQQETSGLNSFVTVLRHAAEKEAAVAGRHSV---MKGPLHGIPIAVKDNFCTAGVRTTASSRMLANFVPPYSATAVSRLEASGAIVVGKTNMDEFGMGSATLFSHFGKTINPWSQ---AAEKGDKPRLAAGGSSGGSAVAVATGSALAALGSDTGGSVRQPAAFCGLVGLKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPLDSTCLEQPHRPCFDRTMEAAASSRAAGLAVSLRGLKVGIPAEFAIQELEGSAVTAWEEGARLLRDAGADVLPVSVPSIPLALPTYFVIACAEASSNLARYDGIRFGFRGSKSLRASRSKEGIGSADTEED----DQRALHDFITASRSQGFGDEVQRRVISGCRVLSAQAYATYYEKALAARIRLRREMNTALSHVDVLLTPVTPTGPFPLTTPAEPAALMVNDVMTVPASLAGLPAIAVPVDLAPSSF--------------VPGLP-----------------VPVGLQLIGRHLCEQQLLIVARALEVRCNFSERIPDYVVKA 602
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: A0A067CTE2_SAPPC (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTE2_SAPPC)

HSP 1 Score: 420 bits (1079), Expect = 1.020e-133
Identity = 257/555 (46.31%), Postives = 329/555 (59.28%), Query Frame = 1 
Query:    7 SRRVQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTLG-VPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMH-TALSVADVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERV 1665
            S+ + AG    +ELTEAC+AQ++ +  LN FVA   E ART A A+DAR+A+G   GPLDGIP   KD FC     PTT  S  L GF  PY+ST T+RL  AG+  LGK NMDEFGMGS   +S  G T+NPWS     T+L +AA+ V GGSSGGSAAA++SG CF ALGSDTGGSVR PAA+CGV G KP YG + RHG+IAYASSLDTP +  ++  D+++VL ++AGPD KD+T +           L        A    L+GLTVGVP E+ V+EL       W+  +R     GA V+EVS+P+   AL  Y +LA AEASSNLSRYDG+RYG R   A  SE   + + +          LH+   RTR+  FG EV+RRIL+G FVL   A++DYYE A+ ++QR+R +   T  S  DVLL PTTP  PF     +DP+ + +ND++T+P SLAGLPA+S+P             +  D G                         LPLG+Q+ G P  E  +L  A ALE +L F   +P RV
Sbjct:   27 SQALAAGTTTATELTEACIAQINATRDLNMFVADTFESARTLAAASDARRASGAARGPLDGIPVGVKDIFCMHNEAPTTCGSKMLDGFHAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSQFGATINPWS-----TNLTDAAL-VSGGSSGGSAAAIASGCCFAALGSDTGGSVRQPAAYCGVTGFKPNYGRISRHGMIAYASSLDTPALFTKTARDASLVLPLLAGPDGKDATAIQ--------ETLPDTWCQLPADTSSLKGLTVGVPNEYFVQELPEAMLHVWDEGIRHLRDAGARVVEVSLPTTKYALPTYYILACAEASSNLSRYDGVRYGFR---AAVSEATSVADASNQATA-----LHDLYCRTRSEGFGPEVQRRILSGTFVLSAGAFNDYYERAVIVRQRIRDDFAATFTSGVDVLLTPTTPTGPFSLHGAADPIEMFMNDIMTIPASLAGLPALSLPAA-----------ITDDAG-------------------------LPLGLQLIGAPKTEDRLLSAAVALEDRLGFRQLIPSRV 523
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: A0A1V9YGS0_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGS0_9STRA)

HSP 1 Score: 415 bits (1067), Expect = 4.590e-132
Identity = 254/556 (45.68%), Postives = 322/556 (57.91%), Query Frame = 1 
Query:    4 ASRRVQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCT-LGVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTALSVA-DVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERV 1665
            AS  + AG      LTEAC+ Q++ +  LN FVA   + AR  A A+DAR+A G   GPLDGIP A KD FC    VPTT  S  L GF  PY+ST T+RL  AG+  LGK NMDEFGMGS   +S  G T+NPWS      +L + A+ V GGSSG SAAA++SG CF ALGSDTGGSVR PAA+CGV G+KP YG + RHG+IAYASSLDTP +  ++  D+A+VL ++AGPD KDST +  G    +    + +          L G+TVGVP E+ VEEL       W+  +R     GA V+EVS+P    AL  Y +LA AEASSNLSRYDG+RYG R   + D+                   LH+   RTR+  FG EV+RRIL+G FVL   A++DYYE A+ ++QR+R +   A +   DVLL PTTP  PF     +DP+ + +ND++T+P SLAGLPA+S+P              A  T  G                       LPLG+Q+ G P  E  VL  A ALE +L F   VP+RV
Sbjct:   19 ASAALSAGTTTAVALTEACIRQIEATRGLNMFVAETIDDARAAAVASDARRAAGTAKGPLDGIPIAVKDIFCMDNSVPTTCGSKILQGFRAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSTFGATINPWSK-----NLGDDAL-VAGGSSGASAAAIASGCCFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPALFTKTARDAALVLPLLAGPDGKDSTAIQDGVPHDWLPTDVSH----------LRGVTVGVPNEYFVEELPETILSVWDEGIRHLRDAGARVVEVSLPMTKYALPTYYILACAEASSNLSRYDGVRYGYRAATSDDAA-------VADDTANQANALHDLYCRTRSEGFGPEVQRRILSGTFVLSAGAFNDYYERAVIVRQRIRADFAAAFATGVDVLLTPTTPTGPFSLHTAADPIEMFMNDIMTIPASLAGLPAVSVP--------------AAVTADG-----------------------LPLGLQLIGAPRTEDTVLLAAGALESRLRFDELVPDRV 514
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: W4H4Y8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4Y8_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 8.780e-130
Identity = 244/549 (44.44%), Postives = 321/549 (58.47%), Query Frame = 1 
Query:   25 GEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTL-GVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTAL-SVADVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERV 1665
            G V    LT+AC+ Q++ +   N FVA   + A   A  +DAR+ +G+  GPLDGIP   KD FC   GVPTTASS  L GF  PY+ST T+RL  AG+  LGK NMDEF MGSG  +S  G T+NPWS     + L + A+ V GGSSG SAAAV+SG CF ALGSDTGGSVR PAA+CGV G+KP YG + RHG+IA+ASSLDTPGILA+++ D+A+VL  IAGPD  DST LP      +  A   +  + +        LTVGVPKE+ V+EL     + W+  +      G  V+E S+P+   AL  Y +LA AEASSNLSRYDG+RYG R     ++    + + + +        LH+   RTR+  FGDEV+RRIL+G FVL   A  DYYE A+ ++Q +R +  +   S  DVLL PTTP  PF     ++PV + +ND++T+P SLAGLP++S+P   +                                        +PLG+Q+ G P  E  +L VAH LE + DF+  +P RV
Sbjct:   36 GSVTSVALTQACIDQIEATKRFNMFVATTFDSALARASESDARRRDGRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWS-----SDLGDRAL-VAGGSSGASAAAVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDGHDSTALPDKLPSQWEPASETDATNTKQ-------LTVGVPKEYYVKELPESILKVWDQGIEWLLQSGVRVVEASLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRAELNNEAAAAAVADASNN----QANALHDLYCRTRSEGFGDEVQRRILSGTFVLSAGALADYYERAVLVRQTIRDDFASTFESGIDVLLTPTTPSGPFAVHGKANPVDMFMNDIMTIPASLAGLPSVSVPAAVLDQ--------------------------------------MPLGLQLIGAPHQEHTLLHVAHLLEQRADFSRHIPLRV 529
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: A0A6G0X3T0_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3T0_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 8.860e-128
Identity = 244/552 (44.20%), Postives = 319/552 (57.79%), Query Frame = 1 
Query:   25 GEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTL-GVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTAL-SVADVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERVKNA 1674
            G V   ELT  C+ Q+  +   N FVA+  + A  +A  +D R+ NG+ +GPLDGIP   KD FC   G PTTASS  L GF  PY+ST T+RL  AG+  LGK NMDEF MGS   +S  G T+NPWS     + LD  A+   GGSSG SAAA+++G CF ALGSDTGGSVR PAA+CGV G+KP YG + RHG+IA+ASSLDTPGIL ++V D+++VL  IAGPD+ DST LP      + +       D       L  LTVG+P E+ V+EL     + W+  +      GA V+E S+P+   AL  Y +LA AEASSNLSRYDG+RYG R   + D E       A +        LH+   RTR+  FG+EV+RRIL+G FVL   A+ DYYE A+ ++Q++R +    L S  DVLL PTTP  PF     +DP+ + +ND++T+P SLAGLP+IS+P  T                            T+G           PLG+Q+   P  E  +L+VA A+E   +F   +P RV  A
Sbjct:   34 GSVTSFELTRGCIDQIQATDRFNMFVAKTFDSALDQAAQSDLRRKNGQALGPLDGIPVGVKDIFCMKNGQPTTASSKILEGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSATKYSTFGATINPWS-----SDLDKNALAA-GGSSGASAAAIAAGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILTKTVRDASIVLRAIAGPDTNDSTSLPDVIEPSWCALPSSKQED-------LSRLTVGIPNEYYVKELPDQILKVWDQGIEWLRQSGARVVEASLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRAAPSDDEEVDNSVNQATA--------LHDLYCRTRSQGFGEEVQRRILSGTFVLSAGAFSDYYERAVLVRQQIRDDFAATLGSGIDVLLTPTTPSGPFGLHTKADPIDMFMNDIMTIPASLAGLPSISVPAATT---------------------------TDGF----------PLGLQLIAAPKQEDTLLRVALAMESHANFDQHIPPRVLTA 527
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: A0A1V9ZNS3_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNS3_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 1.040e-125
Identity = 243/559 (43.47%), Postives = 323/559 (57.78%), Query Frame = 1 
Query:    1 QASRRVQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTLG-VPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEG--AESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTAL-SVADVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERV 1665
            +AS+ ++   +   ELT AC+ Q++ +  LN FVA   E AR  A+ +D R++NG   GPLDGIP   KD FC     PTT  S  L GF  PY+ST T+RL  AG+  LGK NMDEFGMGS   +S  G T+NPWS        D  A+ V GGSSG SAAA++SG  F ALGSDTGGSVR PAA+CGV G+KP YG + RHG+IAYASSLDTP    ++  D+++VL +++GPD KDST +    + G+    L +  +       L GLTVGVPKE+ V+EL       W+  ++     GA V+E S+P    AL  Y +LA AEASSNLSRYDG+RYG R            TEG    +        LH+   RTR+  FG+EV+RRIL+G FVL   A++DYYE A+ +++R+R++   +  S  DVLL PTTP  PF     +DP+ + +ND++T+P SLAGLP+IS+P                         L   G               PLG+Q+ G P  E  +LQ A A+E+Q++F   +P RV
Sbjct:   28 EASKALETQTISALELTNACIEQIEATRQLNMFVADTFESARQLAKESDIRRSNGNARGPLDGIPVGVKDIFCMNNEAPTTCGSKILEGFKSPYESTVTQRLLDAGAIPLGKLNMDEFGMGSATKYSKFGSTINPWSK-----DFDKNAL-VAGGSSGASAAAIASGCVFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPAFFTKTAKDASIVLPLLSGPDGKDSTAIQDSISPGWCQ--LPSSLN-------LNGLTVGVPKEYFVQELPEEILNVWDQGIKHLKEAGARVVETSLPLTKYALPTYYILACAEASSNLSRYDGVRYGHRA----------TTEGIAVNNDDSNQANALHDLYCRTRSEGFGEEVQRRILSGTFVLSAGAFNDYYERAVIVRERIRKDFANSFESGIDVLLTPTTPTGPFSLHGNADPIDMFMNDIMTIPASLAGLPSISVPT-----------------------ALSADG--------------FPLGLQLIGAPKEEDIILQAAIAMENQINFNQFIPTRV 524
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: A0A485L463_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L463_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 2.450e-124
Identity = 242/556 (43.53%), Postives = 309/556 (55.58%), Query Frame = 1 
Query:    4 ASRRVQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFC-TLGVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTAL-SVADVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERV 1665
            AS  + AG V   ELT+AC+ Q+  +   N FVA+  + A  +A  +DAR+  GK +GPLDGIP   KD FC   G PTTA S  L GF  PY+ST T+RL  AG+  LGK NMDEF MGS   +S  G T+NPWS      +L      V GGSS        +G CF ALGSDTGGSVR PAA+CGV G+KP YG + RHG+IA+ASSLDTPGIL ++V D+++VL  IAGPD  DST LP      + +         E     L  LTVG+P E+ V+EL     R W+  +    A GA V+E S+P+   AL  Y +LA AEASSNLSRYDG+RYG R   A D+         E+        LH+   RTR+  FG EV+RRIL+G FVL   A+ DYYE A+ ++Q +R +      S  DVLL PTTP  PF     +DP+ + +ND++T+P SLAGLP++S+P  T              T  G                        PLG+Q+   P  E  +L VAHA+E    F   +P RV
Sbjct:   30 ASDALAAGSVTAVELTQACIDQIHATEHFNMFVAKTFDAALAQAAESDARRQAGKSLGPLDGIPVGVKDIFCMNNGAPTTAGSKILEGFVAPYESTATQRLLDAGTIPLGKLNMDEFAMGSATKYSVFGATINPWSKDTEGGAL------VSGGSSXXXXXXXXAGCCFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAFASSLDTPGILTKTVRDASIVLKAIAGPDGHDSTALPDAIPETWCTLP-----STEPSSSSLAHLTVGIPNEYYVKELPEPILRVWDQGIAWLKASGARVVEASLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRATAADDT--------LENATDNQANALHDLYCRTRSEGFGQEVQRRILSGTFVLSAGAFSDYYERAVLVRQTIRDDFAATFNSGIDVLLTPTTPSGPFGLHSSADPIDMFMNDIMTIPASLAGLPSMSVPAAT--------------TADG-----------------------FPLGLQLIAAPKQEEMLLHVAHAIEGHAQFHQHIPARV 529
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BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Match: A0A5D6Y1X3_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1X3_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 1.300e-123
Identity = 250/565 (44.25%), Postives = 331/565 (58.58%), Query Frame = 1 
Query:    1 QASRRVQAGEVRPSELTEACLAQMDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFCTLGVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGNLFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALGSDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNG-RDREAGGGLLEGLTVGVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAVLASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHEEITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHTALSV--ADVLLAPTTPFPPFLSGPP---SDPVALLLNDVLTVPISLAGLPAISIPVLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQIFGRPLGEGAVLQVAHALEHQLDFASQVPERVKNAR 1677
            QA+  + A +V   +LT AC+AQ++ +  LN FV    E A   AEA+DAR+A G  +G LDGIP   KD FC   VPTTA+S  L GF  PY+ST T RL   G+  LGK NMDEF MGSG L+S  G T+NPWS      +L++ AV                G CF ALGSDTGGSVR PAA+CG+VG+KP+YG V RHG+I++ASSLDTPGI  R+V D+A+VL  IAGPD KDSTC+       + ++ ++     RE   G L G+ VGVP E+ V+EL       W+  V    + GA+V+ +S+P+    + AY ++A AEASSNLSRYDG+RYG R   A + E +  ++ +++        LH+   RTR+  FGDEV+RRIL+G FVL   A  DYYE A+ ++Q++R +   A      DVLL PTTP  PF         DPVA+ LNDV+T+P ++AG+PA+SIP     AS  ++ D                          H     PLG+Q+ G    E  VL+VAHALE + DFAS +P RV  +R
Sbjct:   33 QAAAALDARQVTAVQLTRACIAQVEATHALNAFVYTDFERALRLAEASDARRAAGGALGALDGIPVGVKDLFCMEDVPTTAASKILDGFVSPYESTATARLLAQGAVPLGKLNMDEFAMGSGTLYSKFGATINPWS-----ANLEDDAVXXXXXXXX-XXXXXXXGCCFAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISFASSLDTPGIFTRTVGDAAVVLKAIAGPDEKDSTCMTDDVPLDWCNSTIEQSLASRE---GDLTGVRVGVPHEYFVKELPDEILNVWDKGVEWLLSAGAQVVSMSLPTTKLCIPAYYIIACAEASSNLSRYDGVRYGYR---AKNVELENQSDQSDA--------LHDLYCRTRSEGFGDEVQRRILSGTFVLSAGAMSDYYERAVIVRQKIREDFENAFEAQGVDVLLTPTTPSGPFAVHNKLVKEDPVAMYLNDVMTIPANMAGVPAMSIP-----ASLTSKGD--------------------------H-----PLGLQLMGARRTEATVLRVAHALEQRADFASLIPSRVYESR 541
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16031.3872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIR5_9PHAE2.080e-26071.65Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
D8LG69_ECTSI5.950e-20676.26Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus silicu... [more]
W7TVN2_9STRA2.850e-14147.85Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A067CTE2_SAPPC1.020e-13346.31Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A1V9YGS0_9STRA4.590e-13245.68Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
W4H4Y8_9STRA8.780e-13044.44Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A6G0X3T0_9STRA8.860e-12844.20Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A1V9ZNS3_9STRA1.040e-12543.47Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A485L463_9STRA2.450e-12443.53Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
A0A5D6Y1X3_9STRA1.300e-12344.25Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16031contigH-elongata_contig16031:745..7132 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score574.3
Seed ortholog evalue5.9e-161
Seed eggNOG ortholog2880.D8LG69
KEGG rclassRC00010
KEGG koko:K02433
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
EggNOG free text desc.Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln)
EggNOG OGsCOG0154@1,KOG1211@2759
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionglutaminyl-tRNA synthase
Ec32 orthologEc-17_003970.1
Exons11
Model size2729
Cds size1614
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929941.3042443-UTR-H-elongata_contig16031:744..8131622929941.3042443-UTR-H-elongata_contig16031:744..813Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 745..813 +
1691679216.6175501-UTR-H-elongata_contig16031:744..8131691679216.6175501-UTR-H-elongata_contig16031:744..813Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 745..813 +
1622929941.507829-UTR-H-elongata_contig16031:5179..60431622929941.507829-UTR-H-elongata_contig16031:5179..6043Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 5180..6043 +
1691679216.7152236-UTR-H-elongata_contig16031:5179..60431691679216.7152236-UTR-H-elongata_contig16031:5179..6043Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 5180..6043 +
1622929941.520376-UTR-H-elongata_contig16031:6292..63881622929941.520376-UTR-H-elongata_contig16031:6292..6388Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 6293..6388 +
1691679216.7261229-UTR-H-elongata_contig16031:6292..63881691679216.7261229-UTR-H-elongata_contig16031:6292..6388Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 6293..6388 +
1622929941.5340314-UTR-H-elongata_contig16031:7046..71321622929941.5340314-UTR-H-elongata_contig16031:7046..7132Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 7047..7132 +
1691679216.733687-UTR-H-elongata_contig16031:7046..71321691679216.733687-UTR-H-elongata_contig16031:7046..7132Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16031 7047..7132 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929941.3192832-CDS-H-elongata_contig16031:813..9071622929941.3192832-CDS-H-elongata_contig16031:813..907Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 814..907 +
1691679216.6287029-CDS-H-elongata_contig16031:813..9071691679216.6287029-CDS-H-elongata_contig16031:813..907Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 814..907 +
1622929941.3670294-CDS-H-elongata_contig16031:1467..17161622929941.3670294-CDS-H-elongata_contig16031:1467..1716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 1468..1716 +
1691679216.6377823-CDS-H-elongata_contig16031:1467..17161691679216.6377823-CDS-H-elongata_contig16031:1467..1716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 1468..1716 +
1622929941.3797758-CDS-H-elongata_contig16031:1866..20871622929941.3797758-CDS-H-elongata_contig16031:1866..2087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 1867..2087 +
1691679216.6469553-CDS-H-elongata_contig16031:1866..20871691679216.6469553-CDS-H-elongata_contig16031:1866..2087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 1867..2087 +
1622929941.3928363-CDS-H-elongata_contig16031:2507..27271622929941.3928363-CDS-H-elongata_contig16031:2507..2727Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 2508..2727 +
1691679216.6568143-CDS-H-elongata_contig16031:2507..27271691679216.6568143-CDS-H-elongata_contig16031:2507..2727Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 2508..2727 +
1622929941.4162416-CDS-H-elongata_contig16031:3095..31901622929941.4162416-CDS-H-elongata_contig16031:3095..3190Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 3096..3190 +
1691679216.6655126-CDS-H-elongata_contig16031:3095..31901691679216.6655126-CDS-H-elongata_contig16031:3095..3190Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 3096..3190 +
1622929941.4316406-CDS-H-elongata_contig16031:3430..36401622929941.4316406-CDS-H-elongata_contig16031:3430..3640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 3431..3640 +
1691679216.6753106-CDS-H-elongata_contig16031:3430..36401691679216.6753106-CDS-H-elongata_contig16031:3430..3640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 3431..3640 +
1622929941.454621-CDS-H-elongata_contig16031:3950..40281622929941.454621-CDS-H-elongata_contig16031:3950..4028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 3951..4028 +
1691679216.6841233-CDS-H-elongata_contig16031:3950..40281691679216.6841233-CDS-H-elongata_contig16031:3950..4028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 3951..4028 +
1622929941.4751852-CDS-H-elongata_contig16031:4457..47901622929941.4751852-CDS-H-elongata_contig16031:4457..4790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 4458..4790 +
1691679216.6930313-CDS-H-elongata_contig16031:4457..47901691679216.6930313-CDS-H-elongata_contig16031:4457..4790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 4458..4790 +
1622929941.489663-CDS-H-elongata_contig16031:5065..51791622929941.489663-CDS-H-elongata_contig16031:5065..5179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 5066..5179 +
1691679216.7029588-CDS-H-elongata_contig16031:5065..51791691679216.7029588-CDS-H-elongata_contig16031:5065..5179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16031 5066..5179 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16031.3872.1prot_H-elongata_contig16031.3872.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16031 814..5179 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16031.3872.1

>prot_H-elongata_contig16031.3872.1 ID=prot_H-elongata_contig16031.3872.1|Name=mRNA_H-elongata_contig16031.3872.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=538bp
MDRSSWLNCFVARCDELARTEAEAADARQANGKLIGPLDGIPYAAKDNFC
TLGVPTTASSAALAGFTPPYDSTPTRRLRQAGSPLLGKTNMDEFGMGSGN
LFSCHGRTLNPWSPGPNATSLDNAAVYVPGGSSGGSAAAVSSGACFLALG
SDTGGSVRMPAAFCGVVGMKPTYGLVPRHGLIAYASSLDTPGILARSVLD
SAMVLDVIAGPDSKDSTCLPIGCARGFASALLKNGRDREAGGGLLEGLTV
GVPKEFNVEELDAGARRAWEHAVRMAAALGAEVIEVSIPSVPQALGAYAV
LASAEASSNLSRYDGLRYGERVGHALDSEGKGLTEGAESGMFRDQGGLHE
EITRTRTACFGDEVKRRILTGCFVLCESAYHDYYELAIKIQQRLRREMHT
ALSVADVLLAPTTPFPPFLSGPPSDPVALLLNDVLTVPISLAGLPAISIP
VLTVPASTETRDDVARDTGSGRVDTLETQGGTNGVGGEGHGSCLLPLGIQ
IFGRPLGEGAVLQVAHALEHQLDFASQVPERVKNARC*
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mRNA from alignment at H-elongata_contig16031:745..7132+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16031.3872.1 ID=mRNA_H-elongata_contig16031.3872.1|Name=mRNA_H-elongata_contig16031.3872.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6388bp|location=Sequence derived from alignment at H-elongata_contig16031:745..7132+ (Himanthalia elongata Himel1 dioecious)
CAGGCTTCGCGCAGGGTGCAGGCCGGCGAAGTGCGACCCTCGGAGCTGAC
GGAGGCATGTCTCGCGCAGATGGACCGCTCGAGCTGGTTAAACTGCTTCG
TCGCGCGCTGCGACGAGCTCGCCCGAACGGAAGCTGAGGCGGCTGACGCA
CGCCAGGCCAACGGTGAGGCATGACCAAGGGCCTAACTTGGCCACGTGGT
ACGACAAGAGTTTTTAAATCAGGTTGAATTCTCACATTTAGCGCCCCTGA
TCCTGGTCCAGTCCTGCTTGCGGTCACTATTTCCAAGACTTGATGCGAGA
CAAAAATAAACGTGTAGAGAGAAAGAGATAAAGAAACATATGACGCGAGG
GTGGCTACAGTATGACAAAAAAACACACACACACACACACATACACACAA
ACGGAAAATAGTTTTCGACTCCACATCCATCCTCCATCCCACAAGAGCGA
GCGATTCCATCCTTATGGCTCGGGAACACGGCGAGAATACGACACAACGA
CGTGTTAGTGCTGGTACGAAAAACGCGCTTTTTCTTTTTCACGCCGCCTT
ATGACGCCATCGTGGGTTATCTGCGTACAGCAACTCTCATCTCGCATTTT
CCGGAATTGTTTTTTTGCGCGTGCATGCGTTTGTGGACTCACACACACTC
TCTCTCTTTCTCTCGGGAAAAATCAACTCTGAACGTAGTCAACGCCCCCC
CCCCTATCCCTTTCGCACTTTAGGAAAACTTATCGGTCCCCTGGATGGAA
TACCTTACGCGGCGAAGGACAACTTCTGCACGCTGGGTGTCCCCACGACG
GCTTCCTCTGCCGCCCTCGCCGGTTTCACGCCGCCCTACGACTCTACCCC
AACTCGCCGGCTACGGCAAGCGGGGTCGCCCCTTCTTGGCAAGACCAACA
TGGATGAGTTTGGGATGGGGTCTGGGAATCTCTTCAGCTGCCACGGGCGC
ACCCTCAACCCCTGGTCTCCGGGTATGTCGCCTGCCGGCCTGAAATTCGC
TTTGTTTGTCCTGCTTTTGTTCCGAAAAGTAGAGGGAGGGTGAGTACCGC
CTGACAGCTGGCGGCAGGTTCGGCTAACGCCACAGCTTCCCCACCGAGAT
CGTCCGGGTTTCATCGTTACAGGTCCAAACGCCACGTCTTTGGATAACGC
GGCGGTTTATGTGCCTGGTGGAAGCTCCGGCGGTAGCGCCGCAGCAGTTT
CATCTGGGGCTTGCTTCTTGGCGTTGGGGTCGGACACTGGGGGGTCGGTG
CGGATGCCGGCGGCGTTCTGCGGTGTGGTGGGGATGAAGCCGACCTACGG
CCTGGTGCCTCGCCATGGCCTCATCGCGTACGCAAGCTCCCTGGTGAGTG
CCGCTTTCTCGGACTCCCCCCCCCCCCCCCCCCCCTCTGATATTTTGGCG
CGGGGAACAACCCAACGGGGTCTTTTTAGAGAAAAAAACAAGAAGAAAAC
AAACGANNNNNNNNNNCTCGCCATGGCCTCATCGCGTACGCAAGCTCCCT
GGTGAGTGCCGCTTTCTCGGACTCCCCCCCCCCCTGCCCTCTGATGATAT
TGTGGCGATGGTAACAACGAAACGGGTTATCTTGAGATAAACACGCTAGA
GGAATACACACGTAATCATGGTGCCATGCGCTGGACGCATCTTCTTAGAA
TGTGAGCGGTGAACGGGATGTCGGCCCCCGTTACCGGCGTGGTCGTTCGT
TGGACACAAGCACAATTCCGCCCAGCCCACTCCGCCCGCGCGATGATCGT
CATCCTGCTACAGGATACACCCGGCATACTCGCACGGTCGGTTTTGGACA
GTGCAATGGTGTTGGACGTAATCGCAGGGCCGGACTCCAAAGACTCTACA
TGCCTGCCGATCGGCTGCGCTAGGGGGTTTGCCTCGGCGCTGCTGAAAAA
TGGACGGGACAGGGAGGCAGGCGGTGGTTTGTTGGAGGGATTGACGGTTG
GCGTACCGAAGGAATTCAACGTGGAGGAGCTCGGTGAGAGACGTGTTCGC
TTGAGTGCCCGCCCTCCTCAGCTGGAGCGTAGGATTGGTTCGCTAACACT
GTGCGCAAAATCTCCACAGCTTCTTTGGGCTTTCCGGAGTCCCACTGCGT
CACGCGATGGCGTGGTGCAAAACGCGAAAGACTAGAGAACCGCGCACGAC
CGCACTCTCGATGATGGGTTGCCAACGCTCCAAGAGCGCCCGGGCGATTG
CATGGTCGTGCATTCGTGAGAGACGTAACCTACGGGAAGAATCGAGGACG
AAATATCTTAGTATTTTATCCCTTCGCCGTAAAAACTCACTTCGCGTAAT
TATGAAGCGGGTTGCGACGACCAACCGAGGATTACGACGCTGCCGCCACA
GACGCTGGGGCTCGCAGGGCCTGGGAACACGCCGTGAGGATGGCGGCGGC
TCTTGGGGCTGAGGTCATCGAGGTGTCCATACCGTCCGTGCCTCAGGTGA
GCGGAGGCAGGGCGTTTCGCTCAATGAACTAAGTCCAAACGCGGTTGCTG
AAGCCGTCCCATATAGCCCCTGATAGATACTGAAGTACGTGGTCTGGTTA
TGCAGGAGTAGTATATGCCCCCAACGTTTTGTCCTTCGATGTAAATCCAT
TTGGACAAATGACATGCACGGACTTTCCCCCCCCCTACTCCTTCTTCGGA
CGACCTAAAATTTTCTCCTCCCCGTGGAAACTCCAGGCGCTAGGAGCTTA
CGCCGTGCTCGCCAGCGCCGAGGCATCGTCGAATCTGTCGCGCTACGACG
GTCTGAGGTACGGCGAACGCGTGGGACACGCCTTGGATAGCGAGGGGAAA
GGGCTGACGGAGGGAGCAGAATCCGGGATGTTTCGCGACCAGGGAGGACT
CCACGAGGAAATCACCAGGACGCGCACTGCGTGCTTTGGCGACGAGGTTC
GGCAGAAGTACCCGCTTGCGTTGCGAGGGAAAAGGAAGTGTGCGCTGGGT
AGCAGGTGTTCGTCTCGCGCGACTCTCCTCTTCTAGGTTATCCAGGAGGC
ATGATGGTGGGATTTTGTATCGCCTCTATTGACGTGTAAAGTACAAGAAG
TACGAGAATTAGACCGACCGCGCGCGCAGCTGACACGATCAGCCGCAGGT
TGCGGACGGCGCGCAATTCTTCCCTTTGGTGCGCGGAAATCGCGCTGCCT
CGCTCGCCCCCTCCTCTGGTACCCTTGTCGACAATGGCGACCGTCGCCTG
CTGCAGGTCAAGCGTCGGATTTTGACGGGCTGCTTCGTCTTGTGCGAGTC
TGCGTATCACGATTACTACGAGCTCGCGATCAAGGTATGGCGGCGTGGCA
GGTCAGCAGAGAGGACTCGAACCGTCGATCTAGATGGTGCATATGTTGCG
ACTGTTTCGTTCAACGCGCCACCCTCGCGCTTTCCCGGCTTTCCAGAGTG
TGACCATCGAGTGAACACGCTTGCGGCGCCGCCTTTCACGCGTGTAATAT
ATCTCGCGTACTACTGCGTCCAGAGCTTTCACAAAACCCCCCGCCCAAGC
GCGTGCCACAAATATAAGCATCCCAGTCTCTTTCCCTATCCCCACGCAAA
AGCTTTGTTGCAGTATTTTTCCGTCTCCCAATCGGGATCGTCGATACGAT
CGATGACTTCGGCGAAGTCATCTTCAACAATGTCTTTCTTTTCTTGTGCG
AGAAGGAAAAAAACAACCTGCCCGCTTTTTGCCCCGCTTCTATGCGTCTG
CTCGCTGCCGAAGATCCAACAGCGCCTACGACGAGAGATGCATACTGCGC
TTTCCGTGGCGGATGTCCTCCTTGCTCCGACCACGCCGTTTCCGCCGTTT
TTAAGTGGACCCCCGTCGGACCCCGTCGCCCTTCTCCTGAACGACGTGCT
TACGGTGCCTATCAGCCTTGCCGGGTTACCGGCTATCTCTATCCCTGTTT
TAACGGTTCCAGCATCGACGGAAACACGAGATGACGTGGCACGCGATACA
GGCTCCGGAAGAGTCGATACTCTTGAAACTCAAGGGGGCACCAACGGCGT
CGGTGGCGAGGGACACGGAAGTTGTTTGCTGCCCTTAGGCATTCAGGTGG
GATTCCCCTCTTTGAAGACCTGCACCTCTTTTGGGATGCGTACGCTAGAG
GAAATTTCCAACCCCGAGAAGTTTGAGAGAATGTGTGCATGACGTGGCTC
TGCGATGTCTCCATGCTCTCGAAAAATTCATCTTGACAAAATTTCTGATG
ATACAAAGTTAAACCTTTTGAAAAATGCTGCGCGGTATGCCGTAAAGCAT
TCGAAACACGACTTACAGCTCTCTCGCCCCAATGTTACCGCCGCCCCGAC
GCACCTTCACCCTCTTGAAAGATTTTTGGCAGACCGCTTGGCGAGGGGGC
GGTGCTTCAGGTTGCGCACGCACTAGAGCACCAACTGGATTTTGCGTCAC
AGGTGCCCGAGCGGGTAAAAAACGCACGATGTTAAGTAGCCCTTCGCGTC
TTGGGATCCGAGCCCGGCGCTCGTAGGCTTCACGGGGACAGGATATAATT
ACTGACTGGCGACGGGAAGAAGGGAGAAGCGTAAAGCTGGAGGCCGCAAT
ATCTTTGCGTATTGAATCGACAGCGCGTAGGGATGGAGTTGGCGGCGCGT
GGGGATGGCTTCGCTTTGTCGTCGGCACCAACCCCGAGAGCGGCAGCGTA
GGGGAATGTCAGGCACAAACATTGGGCTTCACTTTGAGCTATCCTTTAGC
GCTGCGACAAGGCCTTGTGGGGATACAGATGTACCGAGTAACCCAAGCGG
CACACTTCGCACGCAGCATATATATTTCCAATCGTGTTCATCATGGCACT
AGCCCTTTCGTGGACGAGTTACGCCGGGGGAAGCGGCGGGTACAAACGTG
TGCTAGGCTCTTCATCGCAAGCCGTAGACGCCTCCCACCCTTCGCCGGAC
ATGTGGTACTGGACCGTAAACACGCGGGCACCCCCTCTCCTTAGTCTTGT
CAGCAGGGCCTGCGGGCGAAGGGACCGTTGCGATACGCATGGCACGCGGG
CAGGACAGATCAGCCGAAAATTGTGAACATGGGTTGTGAGCCAAAGATTG
ATATTTGTTGCCCTTCCGCGTCGCCCATTAAACGTCTTACTGCTGTACAG
CGTAGCTTGATTGTTGATTCTCACCTCTAGGCGGGTGAGCAGGGTTGGGT
ATACGTACAGGAACACGACCGAGACCGCTTTCAGCTCAAGCTCTTCGAAC
GCTTCGGGGCGTGTCGCATCCGTTCGGTGAAATGTCAAGATGTCTGAAAT
CCCTTCCGCGTCGCTCATCTCGCGAGCAGATTCCACACAAGCCTGCCCCG
CCCCGACCCCCCCGCCATACCACGGATTAAAAGCTCGTGAAATAGGACCG
GGTCTAAGCGCCATCGCGTTGGAAAGGAGGATCTGATATCTATAGGTTTT
AAGATATCGCGAATGGATTAACGTCCATGATACCAACAGCGGAACTAGAT
ACCGGCATTCTAGTTGCTGCTTTAGCAATATCCAAACGTGATGATGCACC
TGATCTGCGGAAACTCAAGATCGCATCGCTTACTATTTCACCTGCGAGAC
GTCGAGGCCTATACCTCGACATCCCAAAACCTTCGCGACCGCGACCAGGA
CACGCCCGTCGCCGCAGCCAATATCCAAAACCACGTCATTCAGTGTCAAT
CCTGATGTGGCAAACATCGGTCCAAAATAGAGACGATCGTGAGTGCCTTA
TCGCTGGTATCTAGGTAGTAGTCATATCAATAGTAGGTTCTGCGCTTATC
CTGTTGCGCTCGGAAAACCCAGCAATAGCACCCCATTGCTACGTTACTGC
TTGTGCATAGACCTGGGGCAGCAAGGCGATAGTGACCTCACAGAGCTCGC
TTTCATCATGACCACAACTCATCAACATCCAAGGTGGTCCTTATGTCCCA
AGCGTCCTCCCCACCAGGCGCGTGTGCCCTCTTCGCCGAAGGCTGTGTGT
CATGTGTCATCTATTCCAGTCCACCATTGATAAGAGAGGTTTAGCAATAT
CACTGCCGTGACGATTTTTTTTTTCTTCTGCCTGGTAGGTTTGTTTTCAA
GACACTTGCGACGACGAATCAATAAGGAAGTGATGTGTATGAGGAAGGAT
CCGCGAATAGTTTACTTTCTGCAACTAACTCAGGTGCCGCGTTGAGCGAT
GGAGAGCTTTTTGGTAATTTGTCATGATCAGATCGCATCAGATATGCAAC
GCTTCCAAGGTCAGAAATACAATCGTAAGTGGTACAGTACCGAGCATAAA
GCTCTCAAGACGAAAAAAGTGATGCGCGGTGATGCAATCCTATTATGTTG
AGGGACACGCCTGCTCTTTGGACGAAAGATGACACAGCCTTCGGCGAAGA
GGGCAAGAAGGGGCTCAGCCACGGCGCACCTTCCAACT
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Coding sequence (CDS) from alignment at H-elongata_contig16031:745..7132+

>mRNA_H-elongata_contig16031.3872.1 ID=mRNA_H-elongata_contig16031.3872.1|Name=mRNA_H-elongata_contig16031.3872.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3228bp|location=Sequence derived from alignment at H-elongata_contig16031:745..7132+ (Himanthalia elongata Himel1 dioecious)
ATGGACCGCTCGAGCTGGTTAAACTGCTTCGTCGCGCGCTGCGACGAGCT
CGCCCGAACGGAAGCTGAGGCGGCTGACGCACGCCAGGCCAACGATGGAC
CGCTCGAGCTGGTTAAACTGCTTCGTCGCGCGCTGCGACGAGCTCGCCCG
AACGGAAGCTGAGGCGGCTGACGCACGCCAGGCCAACGGAAAACTTATCG
GTCCCCTGGATGGAATACCTTACGCGGCGAAGGACAACTTCTGCACGCTG
GGTGTCCCCACGACGGCTTCCTCTGCCGCCCTCGCCGGTTTCACGCCGCC
CTACGACTCTACCCCAACTCGCCGGCTACGGCAAGCGGGGTCGCCCCTTC
TTGGCAAGACCAACATGGATGAGTTTGGGATGGGGTCTGGGAATCTCTTC
AGCTGCCACGGGCGCACCCTCAACCCCTGGTCTCCGGGAAAACTTATCGG
TCCCCTGGATGGAATACCTTACGCGGCGAAGGACAACTTCTGCACGCTGG
GTGTCCCCACGACGGCTTCCTCTGCCGCCCTCGCCGGTTTCACGCCGCCC
TACGACTCTACCCCAACTCGCCGGCTACGGCAAGCGGGGTCGCCCCTTCT
TGGCAAGACCAACATGGATGAGTTTGGGATGGGGTCTGGGAATCTCTTCA
GCTGCCACGGGCGCACCCTCAACCCCTGGTCTCCGGGTCCAAACGCCACG
TCTTTGGATAACGCGGCGGTTTATGTGCCTGGTGGAAGCTCCGGCGGTAG
CGCCGCAGCAGTTTCATCTGGGGCTTGCTTCTTGGCGTTGGGGTCGGACA
CTGGGGGGTCGGTGCGGATGCCGGCGGCGTTCTGCGGTGTGGTGGGGATG
AAGCCGACCTACGGCCTGGTGCCTCGCCATGGCCTCATCGCGTACGCAAG
CTCCCTGGTCCAAACGCCACGTCTTTGGATAACGCGGCGGTTTATGTGCC
TGGTGGAAGCTCCGGCGGTAGCGCCGCAGCAGTTTCATCTGGGGCTTGCT
TCTTGGCGTTGGGGTCGGACACTGGGGGGTCGGTGCGGATGCCGGCGGCG
TTCTGCGGTGTGGTGGGGATGAAGCCGACCTACGGCCTGGTGCCTCGCCA
TGGCCTCATCGCGTACGCAAGCTCCCTGGATACACCCGGCATACTCGCAC
GGTCGGTTTTGGACAGTGCAATGGTGTTGGACGTAATCGCAGGGCCGGAC
TCCAAAGACTCTACATGCCTGCCGATCGGCTGCGCTAGGGGGTTTGCCTC
GGCGCTGCTGAAAAATGGACGGGACAGGGAGGCAGGCGGTGGTTTGTTGG
AGGGATTGACGGTTGGCGTACCGAAGGAATTCAACGTGGAGGAGCTCGGA
TACACCCGGCATACTCGCACGGTCGGTTTTGGACAGTGCAATGGTGTTGG
ACGTAATCGCAGGGCCGGACTCCAAAGACTCTACATGCCTGCCGATCGGC
TGCGCTAGGGGGTTTGCCTCGGCGCTGCTGAAAAATGGACGGGACAGGGA
GGCAGGCGGTGGTTTGTTGGAGGGATTGACGGTTGGCGTACCGAAGGAAT
TCAACGTGGAGGAGCTCGACGCTGGGGCTCGCAGGGCCTGGGAACACGCC
GTGAGGATGGCGGCGGCTCTTGGGGCTGAGGTCATCGAGGTGTCCATACC
GTCCGTGCCTCAGACGCTGGGGCTCGCAGGGCCTGGGAACACGCCGTGAG
GATGGCGGCGGCTCTTGGGGCTGAGGTCATCGAGGTGTCCATACCGTCCG
TGCCTCAGGCGCTAGGAGCTTACGCCGTGCTCGCCAGCGCCGAGGCATCG
TCGAATCTGTCGCGCTACGACGGTCTGAGGTACGGCGAACGCGTGGGACA
CGCCTTGGATAGCGAGGGGAAAGGGCTGACGGAGGGAGCAGAATCCGGGA
TGTTTCGCGACCAGGGAGGACTCCACGAGGAAATCACCAGGACGCGCACT
GCGTGCTTTGGCGACGAGGCGCTAGGAGCTTACGCCGTGCTCGCCAGCGC
CGAGGCATCGTCGAATCTGTCGCGCTACGACGGTCTGAGGTACGGCGAAC
GCGTGGGACACGCCTTGGATAGCGAGGGGAAAGGGCTGACGGAGGGAGCA
GAATCCGGGATGTTTCGCGACCAGGGAGGACTCCACGAGGAAATCACCAG
GACGCGCACTGCGTGCTTTGGCGACGAGGTCAAGCGTCGGATTTTGACGG
GCTGCTTCGTCTTGTGCGAGTCTGCGTATCACGATTACTACGAGCTCGCG
ATCAAGGTCAAGCGTCGGATTTTGACGGGCTGCTTCGTCTTGTGCGAGTC
TGCGTATCACGATTACTACGAGCTCGCGATCAAGATCCAACAGCGCCTAC
GACGAGAGATGCATACTGCGCTTTCCGTGGCGGATGTCCTCCTTGCTCCG
ACCACGCCGTTTCCGCCGTTTTTAAGTGGACCCCCGTCGGACCCCGTCGC
CCTTCTCCTGAACGACGTGCTTACGGTGCCTATCAGCCTTGCCGGGTTAC
CGGCTATCTCTATCCCTGTTTTAACGGTTCCAGCATCGACGGAAACACGA
GATGACGTGGCACGCGATACAGGCTCCGGAAGAGTCGATACTCTTGAAAC
TCAAGGGGGCACCAACGGCGTCGGTGGCGAGGGACACGGAAGTTGTTTGC
TGCCCTTAGGCATTCAGATCCAACAGCGCCTACGACGAGAGATGCATACT
GCGCTTTCCGTGGCGGATGTCCTCCTTGCTCCGACCACGCCGTTTCCGCC
GTTTTTAAGTGGACCCCCGTCGGACCCCGTCGCCCTTCTCCTGAACGACG
TGCTTACGGTGCCTATCAGCCTTGCCGGGTTACCGGCTATCTCTATCCCT
GTTTTAACGGTTCCAGCATCGACGGAAACACGAGATGACGTGGCACGCGA
TACAGGCTCCGGAAGAGTCGATACTCTTGAAACTCAAGGGGGCACCAACG
GCGTCGGTGGCGAGGGACACGGAAGTTGTTTGCTGCCCTTAGGCATTCAG
ATTTTTGGCAGACCGCTTGGCGAGGGGGCGGTGCTTCAGGTTGCGCACGC
ACTAGAGCACCAACTGGATTTTGCGTCACAGGTGCCCGAGCGGGTAAAAA
ACGCACGATGTTAAATTTTTGGCAGACCGCTTGGCGAGGGGGCGGTGCTT
CAGGTTGCGCACGCACTAGAGCACCAACTGGATTTTGCGTCACAGGTGCC
CGAGCGGGTAAAAAACGCACGATGTTAA
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