mRNA_H-elongata_contig160025.3860.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: D8LS60_ECTSI (Pantoate--beta-alanine ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS60_ECTSI) HSP 1 Score: 250 bits (638), Expect = 2.730e-80 Identity = 126/157 (80.25%), Postives = 139/157 (88.54%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEEIHNRASDAGR 474
+DLDRYPRQLEQDLELL E L D+VFAPTR EMYSP HRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPD A+FGQKDALQCVLVKRLVEDLN+PV V+ +T READG+AMSSRNA+M+ ERAAAPAVYL+L+AA + R +DAGR
Sbjct: 125 EDLDRYPRQLEQDLELLGGEGLVDLVFAPTREEMYSPDHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDLAFFGQKDALQCVLVKRLVEDLNMPVTVVVSETTREADGLAMSSRNAYMSAEERAAAPAVYLSLRAAADARQREADAGR 281
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A835YM10_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM10_9STRA) HSP 1 Score: 195 bits (495), Expect = 5.360e-59 Identity = 98/151 (64.90%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEEIHNR 456
+D D+YPRQLE+D+ LL E LAD+VFAPT + MY P H +YVDP G + L EG ARPGFFRGVATVV KL NVVQPD AYFGQKDALQCV+++R+V DLN P+KV T R+ADG+A+SSRNA++TP ERAAAP V+ AL AA R
Sbjct: 95 EDFDKYPRQLEKDVALLHKEGLADLVFAPTSAVMYGPHHCVYVDPHGVEALSEGAARPGFFRGVATVVAKLFNVVQPDAAYFGQKDALQCVVIRRMVADLNFPLKVRVLPTARDADGLALSSRNAYLTPDERAAAPVVHRALLAARAAWQR 245
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A1W0A6E2_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6E2_9STRA) HSP 1 Score: 183 bits (465), Expect = 9.130e-55 Identity = 84/153 (54.90%), Postives = 116/153 (75.82%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEEIHNRAS 462
+D D+YPR + D+ L E DIVF P +MY P HR+YVDP+GFDD+PEG RPGFFRGVATVVTKL N+V P A+FGQKDA+QCV++KR++EDLN P+++ KT+RE +G+AMS+RN +++PAER A+ +Y LK+A+++ A+
Sbjct: 84 EDFDKYPRTFDADMAKLG-ENGVDIVFVPQTKDMYLPEHRVYVDPVGFDDVPEGKCRPGFFRGVATVVTKLFNIVAPTHAFFGQKDAVQCVVIKRIIEDLNFPIELKVLKTKREENGLAMSTRNQYLSPAERTASAVIYAGLKSAQDLFKNAT 235
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A485LIB8_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIB8_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.320e-53 Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEEIHNRASDAGR 474
+D D+YPR LE DL LL + DIVF PTR MYSPS R YVDP GF+D+PEG RPGFFRGVATVVTKL N+V P A+FGQKDA+QCV++KRL++DLN P+++ T RE G+AMS+RN ++TP ER A+ +Y LKAA E H + S A R
Sbjct: 93 EDFDKYPRTLEADLALLKRHNV-DIVFTPTRDSMYSPSFRTYVDPEGFNDVPEGQCRPGFFRGVATVVTKLFNIVTPTHAFFGQKDAVQCVVIKRLIDDLNFPIELNVLDTCREESGLAMSTRNQYLTPDERLASAVIYKGLKAAAE-HFQTSTAPR 247
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A1V9Z4S1_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4S1_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.360e-53 Identity = 86/146 (58.90%), Postives = 109/146 (74.66%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAE 441
+D D+YPR E D+ L Q DIVF PT S MY P HR YVDP GFDD+PEG RPGFFRGVATVV KL N+V P A+FGQKDA+QCV++KRL+EDLN P+ + T+READG+AMS+RN +++P+ER+AA +Y L+ A+
Sbjct: 89 EDFDKYPRTFEADMAALRA-QGVDIVFVPTTSVMYLPDHRTYVDPTGFDDVPEGTCRPGFFRGVATVVAKLFNIVAPTHAFFGQKDAVQCVVIKRLIEDLNFPIDLRVLDTKREADGLAMSTRNQYLSPSERSAAKVLYAGLRQAK 233
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A4D9CZ53_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ53_9STRA) HSP 1 Score: 179 bits (453), Expect = 7.280e-53 Identity = 86/147 (58.50%), Postives = 115/147 (78.23%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEE 444
+D D+YPR LE D +L+ E+ D +FAP ++MY+PSHR YV P GF+ EG +RPG F+GVAT+VTKL +VQP +AYFGQKDA+QCVL++RLVEDLN+P ++ C T RE DG+AMSSRNA+++ ER+AAP VY +L+AAE+
Sbjct: 73 EDFDKYPRDLENDAKLVV-EKGVDFIFAPGVADMYTPSHRCYVVPEGFEHFAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQ 218
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A6G0X4L7_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4L7_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.200e-52 Identity = 90/154 (58.44%), Postives = 110/154 (71.43%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEEIHNRASD 465
+D D+YPR LE DL LL EQ DIVF P R MYSP R YVDP GF+D+PEG RPGFFRGVATVV+KL N+V P A+FGQKDA+QCV++KRL+EDLN P+ + T RE DG+AMS+RN ++TP ER A+ +Y LK A E S+
Sbjct: 85 EDFDKYPRTLEADLALLR-EQNVDIVFTPVRETMYSPFFRTYVDPEGFNDVPEGQCRPGFFRGVATVVSKLFNIVAPTHAFFGQKDAVQCVVIKRLIEDLNFPISLQVFDTCREPDGLAMSTRNQYLTPEERQASSIIYAGLKKAAETFASTSE 237
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: T0QY43_SAPDV (Pantoate--beta-alanine ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QY43_SAPDV) HSP 1 Score: 176 bits (445), Expect = 1.020e-51 Identity = 87/155 (56.13%), Postives = 112/155 (72.26%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEEIHNRASDA 468
+D D+YPR E D+ L EQ DIVFAPT + MY P HR YVDP+GFDD+PEG RPGFFRGVATVV KL N+V P A+FGQKDA+QCV++KRL+EDLN P+ + T RE DG+AMS+RN +++P ER A+ +Y L+ A+ + A+ A
Sbjct: 87 EDFDKYPRTFEADMAKLR-EQGVDIVFAPTTATMYLPDHRSYVDPVGFDDVPEGQCRPGFFRGVATVVAKLFNIVSPTHAFFGQKDAVQCVVIKRLIEDLNFPITLRVMDTMREDDGLAMSTRNQYLSPDERVASSILYAGLRQAKADFDAATTA 240
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A7R9WRY9_9STRA (Pantoate--beta-alanine ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRY9_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.040e-51 Identity = 85/146 (58.22%), Postives = 115/146 (78.77%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAE 441
+DLD+YPRQLE+D+ +L T+ + +FAPT EMY +H Y+DP GFDD+PEG++RPG FRGVAT+VTKL N+V+P RAYFG+KDA Q L++R+VEDLN+ + ++ T READG+AMSSRNA++T ER AAP V+ +L AA+
Sbjct: 72 EDLDKYPRQLERDIGVL-TQCGVEHLFAPTADEMYGKNHISYIDPEGFDDIPEGISRPGHFRGVATIVTKLFNIVKPHRAYFGRKDAAQLCLIERIVEDLNMDLSIVPVDTMREADGLAMSSRNAYLTAEERKAAPVVHRSLLAAK 216
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Match: A0A7S2ESW5_TRICV (Pantoate--beta-alanine ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ESW5_TRICV) HSP 1 Score: 173 bits (439), Expect = 6.550e-51 Identity = 90/148 (60.81%), Postives = 109/148 (73.65%), Query Frame = 1
Query: 4 QDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDRAYFGQKDALQCVLVKRLVEDLNIPVKVITCKTRREADGVAMSSRNAFMTPAERAAAPAVYLALKAAEEI 447
+DLDRYPRQLE+D ELLA E D +FAP MY +H YVDP GFDD EG +RPG FRGVATVVTKL N+V+PD AYFGQKDA QCV ++R+ DL++ V+V T RE DG+AMSSRNA++T ER AAP VY +L AA ++
Sbjct: 74 EDLDRYPRQLERDTELLA-ESGVDHLFAPDGDAMYGENHVTYVDPTGFDDTSEGRSRPGHFRGVATVVTKLFNIVRPDVAYFGQKDAAQCVAIRRIASDLDMDVRVEVLDTVREGDGLAMSSRNAYLTDEERRAAPVVYRSLVAARDV 220 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160025.3860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig160025.3860.1 >prot_H-elongata_contig160025.3860.1 ID=prot_H-elongata_contig160025.3860.1|Name=mRNA_H-elongata_contig160025.3860.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp RQDLDRYPRQLEQDLELLATEQLADIVFAPTRSEMYSPSHRIYVDPLGFDback to top mRNA from alignment at H-elongata_contig160025:128..1281+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig160025.3860.1 ID=mRNA_H-elongata_contig160025.3860.1|Name=mRNA_H-elongata_contig160025.3860.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1154bp|location=Sequence derived from alignment at H-elongata_contig160025:128..1281+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig160025:128..1281+ >mRNA_H-elongata_contig160025.3860.1 ID=mRNA_H-elongata_contig160025.3860.1|Name=mRNA_H-elongata_contig160025.3860.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=954bp|location=Sequence derived from alignment at H-elongata_contig160025:128..1281+ (Himanthalia elongata Himel1 dioecious)back to top |