mRNA_H-elongata_contig159820.3853.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI) HSP 1 Score: 193 bits (491), Expect = 1.050e-56 Identity = 100/141 (70.92%), Postives = 117/141 (82.98%), Query Frame = 1
Query: 1 VYVDGGVSN-GDLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDTIDV 420
VY G VS+ GDL ILALGG GIV GL +YGYKIIAAIGVKIAKITPSRGF+IELG+A+MIIIGTRLE PLSTTHCQVGAT GVALLEG GG+N VL K GW+ITI++C ++C+++F+QGAYAP+VYDTID+
Sbjct: 364 VYTTGVVSSEGDLGDNA-FWILALGGFGIVTGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMIIIGTRLEIPLSTTHCQVGATTGVALLEGTGGVNGTVLGKAVFGWIITIIVCALTCSVIFAQGAYAPYVYDTIDL 503
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE) HSP 1 Score: 189 bits (481), Expect = 9.010e-56 Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 1
Query: 1 VYVDGGVSN-GDLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDTI 414
VY G VS+ GDL ILALGG GIV GL +YGYKIIAAIGVKIAKITPSRGF+IELG+A+M+IIGTRLE PLSTTHCQVGAT GVALLEG GG+N VL K GW++TI++C ++C+++F+QGAYAP+VYDTI
Sbjct: 307 VYSTGVVSSEGDLGDDA-FWILALGGFGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIVTIIVCALTCSVIFAQGAYAPYVYDTI 444
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE) HSP 1 Score: 191 bits (484), Expect = 1.110e-55 Identity = 98/139 (70.50%), Postives = 115/139 (82.73%), Query Frame = 1
Query: 1 VYVDGGVSN-GDLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDTI 414
VY G V+ GDL ILALGG+GIV GL +YGYKIIAAIGVKIAKITPSRGF+IELG+A+M+IIGTRLE PLSTTHCQVGAT GVALLEG GG+N VL K GW+ITIV+C ++C+++F+QGAYAP+VYDTI
Sbjct: 363 VYTTGEVTTEGDLGNDA-FWILALGGIGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTI 500
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: D8LJQ5_ECTSI (High affinity phosphate transporter (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ5_ECTSI) HSP 1 Score: 178 bits (451), Expect = 1.260e-54 Identity = 88/137 (64.23%), Postives = 111/137 (81.02%), Query Frame = 1
Query: 1 VYVDGGVSNGDLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDT 411
VY+DG V +G+L LALGG GIV GL LYG+KI+ AI VKI+KITPSRGFSIE+GAA+++I GT L PLS+THCQVGAT+G+ALLEG+GG+N+ +++K AGW +T ICG+SCALLF+QG YAPFV+DT
Sbjct: 28 VYIDGEVRMKGSLWKLGYLTLALGGFGIVAGLSLYGHKIVTAISVKISKITPSRGFSIEIGAALVMITGTMLGVPLSSTHCQVGATSGIALLEGLGGLNTRMVLKIMAGWAVTTAICGVSCALLFAQGVYAPFVFDT 164
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI) HSP 1 Score: 186 bits (472), Expect = 8.400e-54 Identity = 90/120 (75.00%), Postives = 105/120 (87.50%), Query Frame = 1
Query: 58 ILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDTID 417
ILA GGLG+V GL LYGY IIAAIGVKIAKITPSRGF+IELG+A+ +IIGTRLE PLSTTHCQVGATAGVALLEG GG+N +VL K GW++TIV+CG++C+ LF+QGAYAP+ YD ID
Sbjct: 393 ILAFGGLGMVAGLALYGYNIIAAIGVKIAKITPSRGFAIELGSALTVIIGTRLEIPLSTTHCQVGATAGVALLEGSGGVNGIVLAKAIFGWVVTIVVCGLTCSALFAQGAYAPYAYDIID 512
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI) HSP 1 Score: 184 bits (466), Expect = 2.470e-53 Identity = 96/138 (69.57%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 1 VYVDGGVSNG-DLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDT 411
VY+DGG+ G DL A G+L LALGG GIV GL L G+KII AIGVKIAKITPSRGFSIE+GAA+++I GTRL PLS+THCQVGAT+GVALLEG+ G+N+ +++K AGW T VICG+SCALLF+QGAYAPF +DT
Sbjct: 335 VYIDGGIRRGRDLGAP-GYLTLALGGCGIVAGLALCGHKIITAIGVKIAKITPSRGFSIEIGAALVMITGTRLGVPLSSTHCQVGATSGVALLEGLDGLNTRMVLKIIAGWAATTVICGVSCALLFAQGAYAPFAFDT 471
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: A0A6H5KWD9_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD9_9PHAE) HSP 1 Score: 168 bits (426), Expect = 4.590e-48 Identity = 88/138 (63.77%), Postives = 109/138 (78.99%), Query Frame = 1
Query: 1 VYVDGGVSNG-DLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDT 411
VYVDG + G DL A G+L LALGG G+V GL LYG+K+I AIGVKIAKITPSRGFSIE+GAA++++ TRL PL +THCQVGAT+GVALLEG+ +N+ ++K A W T ICG+SCALLF++GAYAPF +DT
Sbjct: 263 VYVDGEIRRGRDLGAP-GYLALALGGFGVVAGLALYGHKLITAIGVKIAKITPSRGFSIEIGAALVMMTATRLGVPLCSTHCQVGATSGVALLEGLDRLNTRTVLKIIARWAATSAICGVSCALLFARGAYAPFAFDT 399
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI) HSP 1 Score: 170 bits (430), Expect = 1.000e-47 Identity = 84/121 (69.42%), Postives = 102/121 (84.30%), Query Frame = 1
Query: 58 ILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFVYDTIDV 420
ILALGG GIV GL +YGYKII+AIGVKI K+TPSR FSI+LG+A+MIIIGTRLE P S THC+VGAT GVALLEG+ GIN V+ KT GW+ T ++CG++C+ LF+QGAYAP+ YDTID+
Sbjct: 383 ILALGGAGIVAGLTIYGYKIISAIGVKIPKVTPSRCFSIKLGSAIMIIIGTRLEIPFSPTHCKVGATTGVALLEGLDGINLNVVGKTVLGWITTSLVCGITCSGLFAQGAYAPYAYDTIDM 503
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: G9E5H5_9PHYC (Phosphate permease n=1 Tax=Ostreococcus lucimarinus virus OlV4 TaxID=754063 RepID=G9E5H5_9PHYC) HSP 1 Score: 156 bits (394), Expect = 7.760e-46 Identity = 80/134 (59.70%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 1 VYVDGGVSNGDLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAPFV 402
+Y G VS + IL+LG GIV GL LYGYKI+ A+G K+AK+TPSRG IELGAA +II+G+RL +PLSTTHCQVGAT GVAL EG GG+N +L KT AGWL+T+++ G + A LF+QGAYAP V
Sbjct: 34 IYKSGKVSKNADMGNDAYWILSLGATGIVAGLSLYGYKILNALGTKMAKLTPSRGICIELGAAAVIILGSRLGWPLSTTHCQVGATVGVALFEGTGGVNWKLLYKTIAGWLLTLIVVGSTTAFLFAQGAYAPMV 167
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Match: A0A7S0QA31_9EUKA (Phosphate transporter n=3 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QA31_9EUKA) HSP 1 Score: 162 bits (411), Expect = 6.060e-45 Identity = 84/132 (63.64%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 1 VYVDGGVSNGDLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKITPSRGFSIELGAAVMIIIGTRLEFPLSTTHCQVGATAGVALLEGIGGINSVVLMKTAAGWLITIVICGMSCALLFSQGAYAP 396
++ G VS+ G+ ILALGGLGI GL LYG KI+AA+GVKIAKITP+RGF+IELGAA++IIIG+RL +PLSTTHCQVGAT GVALLEG GG+N +L+KTA GW+IT+V+ G + ALLF+ G + P
Sbjct: 376 IHATGEVSSKSDMGVAGYWILALGGLGIATGLLLYGXKIMAALGVKIAKITPARGFAIELGAALIIIIGSRLGWPLSTTHCQVGATTGVALLEGKGGVNKYILVKTAVGWVITLVVVGCTAALLFAWGIHTP 507 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159820.3853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig159820.3853.1 >prot_H-elongata_contig159820.3853.1 ID=prot_H-elongata_contig159820.3853.1|Name=mRNA_H-elongata_contig159820.3853.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp VYVDGGVSNGDLDATVGHLILALGGLGIVLGLGLYGYKIIAAIGVKIAKIback to top mRNA from alignment at H-elongata_contig159820:191..1299+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig159820.3853.1 ID=mRNA_H-elongata_contig159820.3853.1|Name=mRNA_H-elongata_contig159820.3853.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1109bp|location=Sequence derived from alignment at H-elongata_contig159820:191..1299+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig159820:191..1299+ >mRNA_H-elongata_contig159820.3853.1 ID=mRNA_H-elongata_contig159820.3853.1|Name=mRNA_H-elongata_contig159820.3853.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at H-elongata_contig159820:191..1299+ (Himanthalia elongata Himel1 dioecious)back to top |