mRNA_H-elongata_contig15979.3849.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15979.3849.1
Unique NamemRNA_H-elongata_contig15979.3849.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: D8LI35_ECTSI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI35_ECTSI)

HSP 1 Score: 590 bits (1520), Expect = 7.380e-203
Identity = 297/415 (71.57%), Postives = 336/415 (80.96%), Query Frame = 1
Query:    1 VVNHLLGRDPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSA-----GGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAVHASES---------MAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKT--GSNETEAVALLEPSPVARFRGHAQAVTGLASPVG-GQPQ-------QQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGKIISGGADGAVKTFVVPE 1173
            VVNHLLGRDPPTPFD+LVMGRFLRSSLR+VM+RHALSGEA+LEVEY+PALRQPTEAEHA++PDWVSAVAG G G++TFVTGCYDG LRVYGP CK  S  KAH++PVT LCAVPS      GG + AG LSGSKDMT R+WR  GSG N+SLEAAA+LRGH +SISA HA+ S          AYTGDW GHVC+WDV+CL  G   G+ + +GTKRRKT  G+       + E +P+A FR HAQAVTGLA P G G+PQ          LYSASLDRAVKTWD ERQDC+HTLN P+A+TCLGCS SGRMLATGHPDARVRIWDTR +GETLTRASLSSH QW++GV WAP SETM+LSCSHDG+VKLWDIRST+PLHSA+AH GKA CCGWQDGKI+SGG DGAVKT+VVPE
Sbjct:   48 VVNHLLGRDPPTPFDMLVMGRFLRSSLRSVMQRHALSGEAVLEVEYLPALRQPTEAEHADQPDWVSAVAGAGAGLETFVTGCYDGCLRVYGPGCKVTSLEKAHQAPVTALCAVPSLAGGRPGGAHAAGFLSGSKDMTARLWRRAGSGGNSSLEAAAILRGHANSISAAHAAASGSGDSGGAPRAYTGDWSGHVCLWDVACLEGGHADGDDA-QGTKRRKTDTGAAAXXXXXVTELTPLASFRAHAQAVTGLAGPGGVGRPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTGVKWAPGSETMVLSCSHDGSVKLWDIRSTLPLHSAQAHRGKALCCGWQDGKIVSGGEDGAVKTYVVPE 461          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A6H5KQ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ32_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.250e-94
Identity = 147/202 (72.77%), Postives = 164/202 (81.19%), Query Frame = 1
Query:  598 GTKRRKT--GSNETEAVALLEPSPVARFRGHAQAVTGLASPVG-GQPQ-------QQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGKIISGGADGAVKTFVVPE 1173
            GTKRRKT  G+      A+ E +P+A FR H+QAVTGL  P G G PQ          LYSASLDRAVKTWD ERQDC+HTLN P+A+TCLGCS SGRMLATGHPDARVRIWDTR +GETLTRASLSSH QW++ V WAP SETM+LSC HDGAVKLWDIRST+PLHSA+AH+GKA CCGWQDGKI+SGG DGAVKT+VVPE
Sbjct:   10 GTKRRKTDTGAAAAAVAAVTELTPLAGFRAHSQAVTGLVGPGGVGGPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKIVSGGEDGAVKTYVVPE 211          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A836CE58_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE58_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.930e-71
Identity = 166/446 (37.22%), Postives = 220/446 (49.33%), Query Frame = 1
Query:    1 VVNHLLGRDP-------------------PTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKT---------FVTGCYDGFLRVYGPD--CKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRI------------HGSGSNASLEAAAVLRGHDSSISAVHASES----MAYTGDWGGHVCMWDVSCL--GAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTG--LASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGC------SSSGRMLATGHPDARVRIWDTRMK-GETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGKIISGGADGAVKTFVV 1167
            VVNHLLG +                    P PFD+L+ GRFLR+SL   M+ HA+SGE +LE+EY+PALRQPTE     +PDWVSA+A C     T           + CYDG LR+YG         +A+    P+T L A                 D   R W +                     E AAVL GH +S++AV  S +     A +GDW G +C+WD++     AGAD  E    G KRRK  + E +AV ++E  P A F+ H+QAVTG  LA P         LY+ S D ++K WD +RQDCV T+   +A+ C+        +++  +LATGHPD R+R+WD R K GETLT A+L++   W+ GV WA  S                   S   L +  AH+G A C  W  G + SGG DG V+TF V
Sbjct:   62 VVNHLLGLNADTSAAAAAPHDAAPPSSKAPIPFDILIDGRFLRTSLARYMRAHAVSGETVLELEYLPALRQPTEESADTQPDWVSALAACAGAAGTGGERVAGPFLASACYDGCLRLYGASGGLDIAHSARVSAQPLTALAAXXXXXXXX--------XDDAERCWLLAXXXXXXXXXXXXXXXXXXXXEQAAVLSGHQNSVAAVSFSPAGGTHTAASGDWDGRMCLWDLAAAQGAAGADA-EAGGPGVKRRKRAAGEADAV-VVELEPTAVFKAHSQAVTGVYLAGP-------DTLYTGSWDHSLKAWDAQRQDCVRTMACAKAVACMDAQGGDDAAAASGLLATGHPDGRIRVWDVRTKAGETLTLATLAARGGWVYGVKWAHGSAYNXXXXXXXXXXXXXXXXSGAALRTLPAHKGAALCVAWHAGGVASGGDDGVVRTFKV 490          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A2D4C6Q8_PYTIN (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6Q8_PYTIN)

HSP 1 Score: 242 bits (618), Expect = 3.590e-67
Identity = 149/399 (37.34%), Postives = 220/399 (55.14%), Query Frame = 1
Query:    1 VVNHLLGRDPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSN-KGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTR--MKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDG-----KIISGGADGAVKTFVV 1167
            VVNHLL    P PFD L+ G FLR+SL   M+RHALS E++L +EY+ AL +P++      PDWVSAV+     V   VTGCYDG +RVY  +   +++ KAH+  V  +    +   +    + S  KD  G++WR + +     L A A L GH +S+ A+   A    A TG W   V +W V    +G++  EVS+ +  K++K+ +  +  V+  +        GH   VTG+A       Q   + SA  DR+++ WD     C  T+   RAIT +  +++G M+ T HPD  VR+WD R    GE+L + +  SH +W++ V+W P +E + LS  +DGAVK+WD+RST+PLH+  AH+GKA    W+         +SGG D  +K F V
Sbjct:  208 VVNHLLNTAEPRPFDFLIDGNFLRTSLEKYMQRHALSEESMLTLEYVEALPEPSQKNETNHPDWVSAVSAAQDIV---VTGCYDGQVRVYDLEGNCLASVKAHQGAVKAVSVQLAKQNV--FLITSSGKDQMGQVWRFNAA--TRQLSAVASLTGHLNSVDAIALDARAERALTGSWDNTVRVWMVP---SGSEAVEVSDAQPKKKQKSDAKSSGVVSFSQLEAEIVLVGHTSYVTGVAFHPTDAHQ---VVSAGSDRSIRLWDLTTHQCKQTMKGNRAITSVSVNANG-MVVTAHPDHCVRLWDPRATQNGESLVQRTFQSHREWVNAVSWHPTNEHLFLSGGYDGAVKVWDVRSTIPLHTVAAHDGKALDVAWRPVDEPAVSFVSGGEDKQLKLFSV 592          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A8K1CSP5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSP5_PYTOL)

HSP 1 Score: 236 bits (602), Expect = 1.140e-66
Identity = 149/400 (37.25%), Postives = 211/400 (52.75%), Query Frame = 1
Query:    1 VVNHLLGRDPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAG--LLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTR--MKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGK-----IISGGADGAVKTFVV 1167
            VVNHLL    P PFD L+ G FLR+SL   M+R+A+S E+LL +EY+ AL +P +      PDWVSAV+   K V   VTGCYDG +RVY    + +++ KAH+  V  +    S   I G    + S  KD  G++WR + S     L A A L GH +S+  +  H+    A TG W   V +W +       +  E   K  K++K  +  +  V+  +        GH   VTG+A       Q+  + S + DR V+ WD     C  TL   RAIT +  +++G +L T HPD  VR+WD R    GE + + +  SH +W+S V W   +E +  SC +DGAVK+WD+RSTVP+H+  AHEGKA    W+         +SGG D  +K + V
Sbjct:   40 VVNHLLNTTTPRPFDFLIDGVFLRTSLDKYMQRNAVSEESLLILEYVEALPEPEQKNETNHPDWVSAVS-VAKDV--IVTGCYDGQVRVYDLKGECLASVKAHQGAVKAV----SVQFIQGKEYRITSSGKDQMGQVWRFNASSKQ--LSAVAALTGHLNSVDTIQLHSGGRQALTGSWDNTVRVWHLPEDDNAGEDDEAQPK--KKQKNSAKSSGTVSFRQVEAEIILTGHTSYVTGVAF---HPTQEDYVVSGASDRTVRFWDLTTHLCKQTLTGNRAITDISVNANGLVL-TAHPDNCVRLWDPRASQSGENIVQKTFQSHTEWVSAVEWHQQNENLFASCGYDGAVKVWDVRSTVPIHTIAAHEGKALDVAWRPVSEPAVAFVSGGEDKQLKVYSV 424          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A5D6YFB0_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFB0_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.830e-63
Identity = 147/400 (36.75%), Postives = 204/400 (51.00%), Query Frame = 1
Query:    1 VVNHLLGRDPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDV-SCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQ-LLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMK--GETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGW--QDGKII---SGGADGAVKTFVV 1167
            VVNHLL    P PFD LV G+FLR+SL   + +H  S EALL +EY+ AL +P +   A  PDWVSAVA    G+   VTGCYDG +RV+    + V+  KAH   V  +             + +  KD TG++W    +     + A A   GH +S+ AV    +   A TG W   V +WD  + + A                  ++   AV+  +        GH   VTG+A      PQ + L+ S + DR+V+ WD     C  TL   RAIT +  ++ G +L+  HPD  VR+WD R    GE+L + + SSH +W+S V W P   T+  S S+DG+VK+WD RS+VPLH+  AH+GKA    W  +D   +   SGG D  +K F V
Sbjct:   43 VVNHLLNLPVPRPFDFLVDGQFLRTSLEKYLLQHGASEEALLTLEYVEALPEPEKQREANHPDWVSAVAAAHTGL--VVTGCYDGHVRVHDAAGECVAALKAHHGAVKAVSVQRVPEKKREFVIATSGKDQTGQLWLFDAAKKR--ISALAAFTGHLNSVDAVALRVTGEQALTGSWDNTVRVWDTKAAVSAAXXXXXXXXXXXXXXXXXASGASAVSFRQLEAEVVLVGHTSFVTGVAF----HPQHEHLVVSGASDRSVRVWDLTTHSCAQTLTGNRAITDISVNADGLVLSA-HPDHCVRLWDPRASQAGESLVQRTFSSHKEWVSAVEWHPTRATLFASASYDGSVKVWDARSSVPLHTLAAHDGKALDVAWRLEDAAHVAFASGGEDKQLKFFSV 433          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A7S0L654_9EUKA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L654_9EUKA)

HSP 1 Score: 227 bits (579), Expect = 3.310e-63
Identity = 141/404 (34.90%), Postives = 203/404 (50.25%), Query Frame = 1
Query:    1 VVNHLLGRDPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGC------------GKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGL-LSGSKDMTGRMWRIHGSGSNA-SLEAAAVLRGHDSSISAVHASES--MAYTGDWGGHVCMW---DVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDG-KIISGGADGAV 1152
            V+NHLL  +   PFD +V G  LR SL   M RH L+GE  + +EY+  L  P  A  +  PDWVS+VA               + V   ++GCYDG  R +GP  + V T + H S V  +C +       G GL L+ SKD T R W    +     + +   +  GH  S+ A  A+ +     +G W G +C+W   D S   A  D    +    KR +T        A+ E  P+++ + H++ ++GL           LLYSAS D  V+ WD   +     + + +A+ CL  S +   + TGH D  +R+WD R +G  L+     +H  W+SGVAWAP    +L S SHDG+V+LWD RSTVPLH   AH+ K+ C  W    +++SGGADG +
Sbjct:   54 VINHLLSTETTRPFDFVVNGELLRGSLEKAMTRHGLTGEQAVMIEYVELLAPPNLACDSNHPDWVSSVASARTHAMLSGDPTASERVPLVLSGCYDGSGRAWGPGGELVCTMQGHTSGVKAVCWL-------GRGLALTASKDRTLRAWSFQSAAKEQLTAKCEQLYVGHTDSVEAACANPAGDRFCSGGWDGQLCIWRAPDTSVSTAEVDHEPAA----KRART-------PAVSEAHPLSKMQAHSECLSGLCWRTAA-----LLYSASWDGTVREWDVNAESSTSAVTSQKAVLCLDVSLASASIVTGHSDHCLRVWDVRQRG--LSARLTLAHKSWVSGVAWAPHQPLLLASASHDGSVRLWDTRSTVPLHELPAHKPKSLCVSWDGSDRLVSGGADGVL 432          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A1V9ZYX7_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX7_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.030e-59
Identity = 138/394 (35.03%), Postives = 201/394 (51.02%), Query Frame = 1
Query:    1 VVNHLLGRDPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMK--GETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGW---QDGKIISGGADGAVKTF 1161
            VVNHLL    P PFD L+ G FLR++L   + +H L+ EA+LE+EY+ A  +P        PDW+SAVA   K V   VTGCYDG LRV+    + V+  KAH S +  +        ++G  ++SGSKD + + W+     +N  + AA V   H +S+ AV   A    A +G W   V +W ++         E   K  K++KT      ++   E   V    GH   V G+           + YSAS+DR++K WD   + C  T+    +I+ L  S SG +L+  HPD  +R+WD R    G  L + +  SH  W+S V W+ ++E   +S S+DG VK+WD RS++PL +  AH GKA    W        +SGG D  +K +
Sbjct:   40 VVNHLLNTSEPKPFDFLIDGNFLRTTLEKYVLQHNLNEEAVLELEYLEAQLEPEAKSSQNHPDWISAVASYDKYV---VTGCYDGILRVFLTSGELVAQIKAHDSVIKAVT-------MHGDVIVSGSKDQSFKSWKF----TNNKIVAATVGSSHLNSVDAVAIDAQGQHALSGAWDNTVRLWALNA--------EPEEKQVKKQKTSGGGLASLVQQEAKLV--LAGHTSNVVGVTFDPSSS---NIAYSASMDRSIKIWDLALETCKQTMTGSSSISDLSVSKSGLVLSA-HPDTCIRLWDPRAANTGTALVQKTFQSHKLWVSAVEWSTETEHQFVSSSYDGTVKMWDARSSIPLFTLEAHTGKALDVAWVHQSKPAFVSGGEDCQLKFY 405          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: A0A1Y1IFE5_KLENI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFE5_KLENI)

HSP 1 Score: 216 bits (550), Expect = 3.090e-59
Identity = 138/395 (34.94%), Postives = 204/395 (51.65%), Query Frame = 1
Query:    1 VVNHLLGRDPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAVHASES--MAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVAR--FRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSG-RMLATGHPDARVRIWDTRMKGETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGW-QDGKIISGGADGAVKTFVV 1167
            V+N LL  +   PFD LV G  LR+SL +++    LS E  L +EY+PA+  P         DWVSA+ G    V   V+GCYDG  R++    + +++ + H   +T    +P A G     +++ SKD T R+W++ G+ S  S +   VLRGH ++I +V AS S     +G W   + +W VS     A+ G  + K  +   +G+    A A  + +  AR    GH+Q V+ +        +   ++SAS D +V+TWD +      T+   + I  L     G  +LATG  D  +RIWD+R    T +   L SH  WI+ V W       LLS SHDG VK+WD+RS VPLH+ +AH  KA C  W Q+  I+SGGAD  ++   +
Sbjct:   44 VINSLLSTEKLRPFDFLVGGELLRTSLESLLVSKKLSAETTLTIEYIPAVGLPKPVSSHVHDDWVSAINGTSPDV--LVSGCYDGVARLWSSSGEALTSLQGHSDAITSTAVIPRASGS--CDVITASKDRTLRVWQVKGTDSQPSGDLHQVLRGHSAAIQSVVASPSGNEVASGSWDTTIKVWSVS---RDAEDGGSAPKRQRVEDSGA----APAGEQEAREARVTLEGHSQCVSAV-----DWSRADTIHSASWDHSVRTWDVQAAVNTSTITGSKVILALSVGGEGGALLATGGADPAIRIWDSRDSSSTGSAIQLLSHKGWITAVKWHKTRTHQLLSTSHDGTVKMWDVRSKVPLHTVQAHTVKALCVDWFQEATIVSGGADNQLRFHAL 422          
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Match: D0NDP0_PHYIT (Ribosome biogenesis protein WDR12 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=D0NDP0_PHYIT)

HSP 1 Score: 214 bits (546), Expect = 1.200e-58
Identity = 144/401 (35.91%), Postives = 208/401 (51.87%), Query Frame = 1
Query:    1 VVNHLLGR-DPPTPFDLLVMGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAVAGCGKGVKTFVTGCYDGFLRVYGP--DCKEVSTAKAHRSPVTGLCAVPSAGGINGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAV--HASESMAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLEPSPVARFRGHAQAVTGLA-SPVGGQPQQQLLYSASLDRAVKTWDTERQDCVHTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMK--GETLTRASLSSHVQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCCGWQDGK----IISGGADGAVKTFVV 1167
            VVNHLL   D P PFD L+ G FLRSSL   ++ + +S EALL +EY+ AL +P +   ++ PDWVSAVA      +  VTGCYDG LRVY    DCK  ++ KAH+  V  +    S  G     + S  KD   ++WR     S   L   A L GH +S+ AV  HAS +   TG W   V +W       G++         K +KT  ++  AV+  +        GH   VTG+A  P   +  + ++ SA  DR+V+ WD   Q C   L   RA++ L  +++G +L T HP         R +  GE++ + +  SH +W+S V+W P +E + +S  +DG  K+WD RST+PLH+  AHEGK     W++ +     ++GG D  +  F V
Sbjct:   40 VVNHLLATGDSPRPFDFLIDGLFLRSSLDKYLQTNDVSEEALLTLEYVEALPEPQKQNGSDHPDWVSAVASLDD--ELVVTGCYDGVLRVYDAQGDCK--ASVKAHQGAVKAVSVSSSKSGE--FVVASSGKDQLAQLWRYTVKSSK--LSPLAALTGHLNSVDAVQLHASGNRVVTGSWDNTVRVWQTP---NGSEDSSEQRSSKKHKKT-EDDAGAVSFRQLEAEIVLVGHTSYVTGVAFRPKTSEHDEDVVVSAGSDRSVRLWDLVTQSCSQALAGNRAVSDLTVNATGLIL-TAHPXXXXXXXXPRAQQSGESIVQRTFRSHKEWVSSVSWHPSNEHLFVSGGYDGTAKVWDARSTIPLHTVSAHEGKVLDLSWRNQEESVAFVTGGDDKKLNFFNV 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15979.3849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI35_ECTSI7.380e-20371.57Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6H5KQ32_9PHAE2.250e-9472.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE58_9STRA1.930e-7137.22Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A2D4C6Q8_PYTIN3.590e-6737.34Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A8K1CSP5_PYTOL1.140e-6637.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YFB0_9STRA2.830e-6336.75Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A7S0L654_9EUKA3.310e-6334.90Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1V9ZYX7_9STRA1.030e-5935.03Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A1Y1IFE5_KLENI3.090e-5934.94Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
D0NDP0_PHYIT1.200e-5835.91Ribosome biogenesis protein WDR12 homolog n=12 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15979contigH-elongata_contig15979:2..6694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score554.3
Seed ortholog evalue4.5e-155
Seed eggNOG ortholog2880.D8LI35
Preferred nameYTM1
KEGG koko:K11578,ko:K14863
GOsGO:0000151,GO:0000460,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005911,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009506,GO:0009605,GO:0009607,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022613,GO:0030054,GO:0030447,GO:0030684,GO:0030686,GO:0030687,GO:0031461,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0036170,GO:0036180,GO:0040007,GO:0042221,GO:0042254,GO:0042273,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044182,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0046689,GO:0050896,GO:0051276,GO:0051716,GO:0055044,GO:0070013,GO:0070545,GO:0071496,GO:0071704,GO:0071840,GO:0080008,GO:0090304,GO:1901360,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.ribosomal large subunit biogenesis
EggNOG OGsKOG0313@1,KOG0313@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko03036,ko04131
Hectar predicted targeting categorymitochondrion
Exons7
Model size2259
Cds size1149
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929939.245285-UTR-H-elongata_contig15979:1..551622929939.245285-UTR-H-elongata_contig15979:1..55Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15979 2..55 +
1691679215.775983-UTR-H-elongata_contig15979:1..551691679215.775983-UTR-H-elongata_contig15979:1..55Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15979 2..55 +
1622929939.349813-UTR-H-elongata_contig15979:5638..66941622929939.349813-UTR-H-elongata_contig15979:5638..6694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15979 5639..6694 +
1691679215.8531106-UTR-H-elongata_contig15979:5638..66941691679215.8531106-UTR-H-elongata_contig15979:5638..6694Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15979 5639..6694 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929939.2578278-CDS-H-elongata_contig15979:55..1841622929939.2578278-CDS-H-elongata_contig15979:55..184Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 56..184 +
1691679215.788153-CDS-H-elongata_contig15979:55..1841691679215.788153-CDS-H-elongata_contig15979:55..184Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 56..184 +
1622929939.2682872-CDS-H-elongata_contig15979:1246..13481622929939.2682872-CDS-H-elongata_contig15979:1246..1348Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 1247..1348 +
1691679215.7996855-CDS-H-elongata_contig15979:1246..13481691679215.7996855-CDS-H-elongata_contig15979:1246..1348Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 1247..1348 +
1622929939.2850971-CDS-H-elongata_contig15979:1763..19061622929939.2850971-CDS-H-elongata_contig15979:1763..1906Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 1764..1906 +
1691679215.807968-CDS-H-elongata_contig15979:1763..19061691679215.807968-CDS-H-elongata_contig15979:1763..1906Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 1764..1906 +
1622929939.297901-CDS-H-elongata_contig15979:2645..28141622929939.297901-CDS-H-elongata_contig15979:2645..2814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 2646..2814 +
1691679215.8163667-CDS-H-elongata_contig15979:2645..28141691679215.8163667-CDS-H-elongata_contig15979:2645..2814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 2646..2814 +
1622929939.3113868-CDS-H-elongata_contig15979:3211..34741622929939.3113868-CDS-H-elongata_contig15979:3211..3474Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 3212..3474 +
1691679215.8253202-CDS-H-elongata_contig15979:3211..34741691679215.8253202-CDS-H-elongata_contig15979:3211..3474Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 3212..3474 +
1622929939.3228168-CDS-H-elongata_contig15979:4614..47561622929939.3228168-CDS-H-elongata_contig15979:4614..4756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 4615..4756 +
1691679215.8350184-CDS-H-elongata_contig15979:4614..47561691679215.8350184-CDS-H-elongata_contig15979:4614..4756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 4615..4756 +
1622929939.3369741-CDS-H-elongata_contig15979:5437..56381622929939.3369741-CDS-H-elongata_contig15979:5437..5638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 5438..5638 +
1691679215.843975-CDS-H-elongata_contig15979:5437..56381691679215.843975-CDS-H-elongata_contig15979:5437..5638Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15979 5438..5638 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15979.3849.1prot_H-elongata_contig15979.3849.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15979 56..5638 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15979.3849.1

>prot_H-elongata_contig15979.3849.1 ID=prot_H-elongata_contig15979.3849.1|Name=mRNA_H-elongata_contig15979.3849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=383bp
MGRFLRSSLRAVMKRHALSGEALLEVEYMPALRQPTEAEHAEEPDWVSAV
AGCGKGVKTFVTGCYDGFLRVYGPDCKEVSTAKAHRSPVTGLCAVPSAGG
INGAGLLSGSKDMTGRMWRIHGSGSNASLEAAAVLRGHDSSISAVHASES
MAYTGDWGGHVCMWDVSCLGAGADRGEVSNKGTKRRKTGSNETEAVALLE
PSPVARFRGHAQAVTGLASPVGGQPQQQLLYSASLDRAVKTWDTERQDCV
HTLNTPRAITCLGCSSSGRMLATGHPDARVRIWDTRMKGETLTRASLSSH
VQWISGVAWAPDSETMLLSCSHDGAVKLWDIRSTVPLHSARAHEGKAFCC
GWQDGKIISGGADGAVKTFVVPESSRSNKDDP*
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mRNA from alignment at H-elongata_contig15979:2..6694+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15979.3849.1 ID=mRNA_H-elongata_contig15979.3849.1|Name=mRNA_H-elongata_contig15979.3849.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6693bp|location=Sequence derived from alignment at H-elongata_contig15979:2..6694+ (Himanthalia elongata Himel1 dioecious)
GTGGTGAATCACCTGCTGGGCCGCGATCCGCCGACGCCGTTCGACTTGCT CGTCATGGGCCGGTTCCTGCGGAGCTCGCTGCGAGCAGTGATGAAGAGAC ACGCCCTCAGTGGCGAGGCGTTGCTGGAGGTGGAGTACATGCCGGCGTTG CGACAGCCGACCGAAGCTGAGCACGCCGAAGAGGTACGAGCCAGCGCGCA CGCTCGTTTGCTTCCTCGTTATCGTGCGGTGCCCCCCCCCCTTTCCCCTG GCTGTGACATTCATTCGCCGAGGGGAGATGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGCGGCGCCCTCTCTCCTGAGGGGTTTTTTCTATAACTCGT GGTGCTTGGGNNNNNNNNNNCCCCCCCCCCCCCCTCCCCCGGGGTGGGGT TTTGTGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGTGGAGCG CGTACTCAAGCTTTGCATAAGCTGTTATATCATTGACCGCGTGTAATCGG GAGGACCAGGAGGTTGCAGAGGAGTTTTTGAAGCGTTGCATGATTTTATC TGTGCTGTGACTGCTGAGGTGGGTAACCATTCTATAGATAAGTCGTTGTT GTTGATTGAACCCTCCTTTGCTGGAGGGTGAGAAAACTGTGTGTGCAGAG TCTGTGTATCTTGTGATATCTTCTCGTTGCAGGGGACCATGTTTGTCTTT GTCTAATTGTTTGTTTGTTATTTTTGTTCTCTTTTTTTTTCTAATGAAAA AGCTCGAAAATAATAAAAATCGTGAGAGAAAAAAGAGAAAGATAAAATTA GCCCTCTTCGTACTAGTTTTGTTTTCATTTTTTTTTTTTCTGTACACAAT CCGGTACCAATATATATATATATATATAATATCTCGAGGATTAAAGATAG GGACTGGTTCTGACGCAAGCAATCTGAGTGCTGCACGGTACTGCCGGCAT CGGGGCCACGGCTTGTGCGTACCCTATGCAACGTTCCATCTTGCTTGCAA GGGCAAAGTGCTGCGCGATGATCTCGGCGGGAGTTCAAACGTGATCGGTC TGTTACTCTTTCAACGCCCCGTGCGGAGCAAGCAGAAGACGAGGAGAGCC TACTTGTGTGTGTGTGTGACGCGCAAGTGTGTCCTTGTACGAAAATCACG GACTTCGGCCGACGTCATACCTCACCACTCTTGCTTTTTCCTGCGGCATG TGATGCTCCCCCCCCCCCTTCTATGACTCACTACCTGTATGGTAGCCGGA TTGGGTTAGCGCCGTGGCGGGGTGCGGGAAGGGCGTGAAAACGTTCGTGA CCGGGTGCTACGATGGCTTCCTGCGCGTGTACGGCCCCGACTGTAAGGTG AGGTCAGGAAGAGTCATGAGAGTGAATCAGTCGGTTCCGCAAGGAAAAAT AAAAAGACAACAGCAGCAGCCACCATGACTTATTTTTCCTCGGAGGCGTT TTTATTCCTCCTCCTGGCGGATCGGTCATAGCCTGGCGGTTACACCCTCA TATCTACACATCTATGTGCAAGGCAAAATAACTGTTGTATGATGACGTCA TTCACCGAGGCGCGCGGAATTACAGCATATAATAAAATAAAATAACGTGC TAGTAGAACGAGGTGGGATGACGCCGGAACGGTGCGGGAATTGTGTGGAA TGAGTGAAACGCGGATCACTCGCGCGGCCGCGTGAGCGCGATCGATCCAG CCGCGTGACTTCTCAGCTTCGGTGCGATTGTGACAAAAATAAATGTGTAT TTTTCTCCACAGGAAGTGTCAACAGCGAAGGCGCATAGGTCACCGGTGAC AGGTTTGTGCGCGGTGCCCTCCGCTGGCGGCATAAACGGCGCGGGATTGT TGAGCGGCAGCAAGGATATGACCGGTCGCATGTGGAGGATCCACGGGTCC GGGAGGTGAGGACAAGGTATCGTCTGGGGAGATCGGTCAGCGTTCTCTGT GAAGGGGGCGTGGAAGAGCGCCCACGCGACGGTGGGGGTACAATTTTGGG GGCGTTCGGCAAAAAACACGTTGGCGCCGACCGAGGCGGCTTCTCAAGTT TATCGAAGAACAAATCCTCTAATGGCTGCCATACAATACTTTTGTAAATA GATCAAACACTGCCCTCTTTGAAATTCGAACCCGCGAAGTGTCTTGACTG GACAGTCAAATTTGAGTTAATTTTTGACAGAATGGGGCCGAAATTTTGGA TAAGAAGCGACTTTTACGGCAGTGTCGAAATACGACTTCTGGTATCCTTA CACACAACTTGTATTACTCGTATTTACAAAGCCGCATGGCCCCGCCAAGT CATGATTGCCAACCCCCTAGATAGGATCCAAACCATTTACGGAAATGTAT TCAATTGAACCAAGCCTATTATATTACGAGAGCAGCAAAGAGTCACATTG CGGCAACTTGGTTAGGCGTCTAGCTTACCAGCCTGGAATGGGACACACAC AAACGGGAAGCGGGGATAAAGCGCTTGTTTTCTTCTAGGCAGCGACCCGG TAGTGAGCAAACATCGCGGCGTTTTCTTGCCCGCGGTGTGCGCTGACAAA CATAACCTGTGGTGTGCACCGCGTTTCGCCCTGCGCTGTCCTCGAAACCC GGGGTCGCTGGCTGTTTTGTCTCCCCGGTCCCTTGGTCTCGTAGCAACGC CTCCTTGGAGGCGGCAGCTGTGCTCCGCGGCCACGACAGCAGCATCTCGG CGGTGCACGCGTCCGAAAGCATGGCGTACACTGGAGACTGGGGCGGGCAC GTGTGCATGTGGGATGTCTCCTGTCTCGGGGCTGGCGCGGACCGTGGCGA GGTTTCCAACAAGGTTTGGGATCGGGGAAGGCAGCGTGGATGCAAGACGC ACGAACGATCTGTACCGAAGCGATCTGTCGGTAGTATTTATTTTTGCGCG AGGTAACTCCCGTCGAGCGTTATCTTCTGATAACTATATATTTATATATA TATTCAAGTATATTTATATATACATTCAAGTATATTTATATATACATTGA AGTATATTTATATTAATTTCGTTCTGGAATAATAAGTTGTAGGGTATAAA TAAATTATTAGTGCCTCGATATCACATTTCTTTATATATATAGTTGTCTA TTCGGGTCTAATGTGATGTCAATCTATATGATTTTGCTGTAGTGTTCTAG GTTCTAAAATATGCACCGGGGTTTTCACACTTTTGTATAATGTCTGTATC TTTGGTTCAGGGGACGAAACGCCGAAAAACCGGAAGCAACGAGACGGAGG CGGTGGCACTCTTGGAGCCTTCTCCCGTGGCGAGGTTTCGAGGTCATGCT CAGGCGGTGACGGGGCTGGCCAGTCCGGTGGGTGGTCAACCCCAGCAGCA GCTACTGTACAGCGCATCGCTCGACCGGGCGGTAAAGACGTGGGATACCG AGAGGCAGGACTGTGTCCACACCCTCAACACGCCGAGGGCGATCACGTGC CTGGGTTGCTCCTCTAGCGGACGGTGAGCCCCACAAGCAGCGCAAAAGCA TCGGGAGAATGGAGCAGGCTCGTGGGGATCGCCCTTCCCTTGATATATAT ATATATGTGTATGTCCACAGCTTGCGCTGCTGTTGGCGCTGCTATGATTT TGAATTAAATTAATAGAGGAATTAGAAGAGCGCCGCCCGCCCCTCGAGAA GTGGTACCGGTTATCGGATTATAGTGTTGTTTGGGGGGGTGTTGTTATGT TGGTTTTCAGGGGAGGCGCCGCGCGACTTCTTTCCATGTTCCCGTTCGGC GGTCGATCAGCTACTGGTTCGTGTTTGGTCTGTGTGCCTTGGCGTGTCGT TGGTTTCGTCTGTTTTGGGAGGCTCGTTTTTCAACTATTTTTTTAGTCTG TCTTGGATGCCGGACTTGACAACAAGATGCGCTCTTATTTTTCTTGATTC CGTCGCTTATTTTTTTGTTTTCGTTTTCGATTTTTATTAGAGCAGGGTTT GGTTTATTTTTCTTTCGTTCAGGCTACTGCGATCACGTCGATTTGCTTAC CTTTTTTCACCCTCTAGCAAAGAATTAAATAGCGCCGCAGGCGCATTGGC GACCCCGCAGAGCCGTCAGATGAAATCAGCCACCAGAGGTCCCCGAGGAA GGTGCTCCCCGCGCTTGTGGCCCTCCATTTGAATGATTTTCTGCCGAAGC TTGTTGGTAGATGATGTGCTTTTGGTGCTCTAATCTACTCAGCGTGAAAC ATGCAATAATAACAGGATCACAATTGTAGTGCAAAGAGCACAAAAAGCGC TCCCCCCAAAAGCCCCCCCCCCTAGCTTAGACGGGAAAAAGCACCCAAAA TATTTTTCGTCTACGGCGCCCAAAGTGATCGCCAATTTTGCTACGCCTCC ACCGTAGTTATACTGCGGCCGCTCAATACCTAATGATACTGTCAAGCCGC CCATGGCCCTTTCGCAAATTGGCAGTAATCGATATTTCGCCGCCAGCTGA GAGGCTCTATTTAATGCCCTGCCCTCCAGCATGCCGCGGGGATTAAGAAA ATGACCTGAAAACTTTAGGAGAAAGCTGAAATTATAATGATAAAAAACAA TTTAAAACATAAACCAAAATGCGCTTACTTTGCTCCCCTATCCTCTCCTA TCCCGGTCGCAAGGATGTTGGCCACGGGGCACCCGGACGCGAGAGTCCGC ATCTGGGACACTCGCATGAAGGGAGAGACGCTTACAAGGGCTTCTCTCAG TTCCCACGTACAGTGGATCTCTGGCGTCGCCTGGGCGCCAGATTCGGAAA CCATGGTGCGCGTGTTCCTCACGGCGTGAGGTTCAGGAAATAAGACTTTG ATGTTTTTAGGGATGGGTGGGGGGGGAGGGCATGGACGAGGAGGACTTAG CCCTTTTGGAACTGGATTTCAATTTTTATATTGAATTTAGTATATAAAAA AACCAGACCGGCCGAAATATTTCAGAGGCTACGAAAGAGACAGATATCAT GCAGGAGAGGATTAAAGAACCTAAGGGGAAATAATGAGCACCATCTAGCT CTATCTCTCTCTCTCTGACTATTTTTTGGGGTTTTCGTTTTTTCTTCTTC TCTTTCTTGTGCTTCTACACTGCTCCATGAAGAGGAGTACTGCTCCATGA AGAGTTTGGGTCATGAGTGTCAAGGGAACTGACGTTGAGCGCCTCGAGAC GAACGCTAGTAACTGTTCCCCCCCCCCCCCCTGCGGAGGGCTGGCTAACC CTGTACCCTGTCGAGTTTCGCGCGCCTTGGACTACGCTTCGCTTAACCCT TTTGGAACTGGATTTTATGTTTTATATTGAATTTAGTATTCAAAAAACAG ATCGAGTTCCTTAGGGGTTAAGTCCAGTGGAGCAAATCCCACCACCAGCT CTAGTTATACCCTGTGTCTACATTTCGTGTAATACACGATACGCATATCG TTTTTTGTTGTTGTGTTTTTTTGTGTGTGTTGCCAGTTGCTGAGTTGTTC TCACGACGGCGCCGTGAAGCTCTGGGACATTCGATCAACCGTGCCGCTGC ACAGCGCTCGAGCGCACGAGGGGAAGGCGTTTTGCTGCGGCTGGCAGGAT GGGAAGATCATCAGCGGAGGAGCGGATGGGGCGGTCAAGACGTTCGTTGT TCCCGAGAGCAGCAGGAGCAACAAGGACGACCCTTAGACTTGTTTTTGAC GCGATTGCCTGAGACTTGACTCGGATTTGACGACTATAGGAGCATTCGAC ACGAAGACATCCCAAACAGAGCGCTGACCGATCCCCTTCGATGATGAGCT GTTGCATCACCATCTTTGTGCGGCACTAATAATGCCTTAACTCTAAACGA GCATACGTCACTATGGTTGTACTGATGATGGCTTCGTGCGGCCTTGAGTG GCCGGTCTTAATGGTCCGCCTCACGATAATTGGACGGACCTCTGGCCGCC ATGCGACAGCACCCTGCACGGAAGAAAAGACGGCGTTGGGTTGTTTGTTG TTTCCTTCCAGTAGTTGTTGTGTTAGTGATTTCCGAACGCTTCGGGTGGA CCATTCTCGCGAACCTTGTGCGAGCTGGTCACCGCATTAGCGCACGTAAA ACAACGGCTGTGCGCAGGAGCCACACTACTACGCACCCTTTATCTTTTTC CTAGATCGCTCAGAGAGGCAGCAGTAAAATGCGCGGTCCGTTAGATCAAA ATATCATCCTTCACGTCGCTCGCATCGATGTCACGTATTTAGTATTTATC CCTTGTTCGTAAAACATGACCCTCGCGCATAGGTATGGTTTGCGTTGAGC TTAGAGGGAAATTAGTATGAAATAGCGAAATAACACCCCTAAGTAGAGGG AGGAAGAGAACCTGTCACTGGGGATCAATCGGTGGGTAGTCCCCGACGAT ATAAGCCTTTTGGAACTCCCCTGGGTGGTAGGACGACAGTGAAAATCTAG ACCATCTTGTGCTTATGCTCAAAATGCCAATATCCTGATATTGTACATCC ATCACAAGCTCTGCTTGTCTCGTCAGATATAAGTTATTATGTACAGTATA TCGTGTTCCGTATTAGTTGAGGCGCCCCACCCCGAATGAGAATCGCCTAT TTTGATAGAGCTCCTTCCGCGCGGTGGCAGCGGCTTCCACAAGCCGCGCG GGGATTCTTATCCCCGTAAATACATCTGCATGTCGAAGGGAACGCTGGAC GTGATCAATCGGCTTCTGCGGCAGCCTCTCGGAGGTACTTCGA
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Coding sequence (CDS) from alignment at H-elongata_contig15979:2..6694+

>mRNA_H-elongata_contig15979.3849.1 ID=mRNA_H-elongata_contig15979.3849.1|Name=mRNA_H-elongata_contig15979.3849.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2298bp|location=Sequence derived from alignment at H-elongata_contig15979:2..6694+ (Himanthalia elongata Himel1 dioecious)
ATGGGCCGGTTCCTGCGGAGCTCGCTGCGAGCAGTGATGAAGAGACACGC
CCTCAGTGGCGAGGCGTTGCTGGAGGTGGAGTACATGCCGGCGTTGCGAC
AGCCGACCGAAGCTGAGCACGCCGAAGAGATGGGCCGGTTCCTGCGGAGC
TCGCTGCGAGCAGTGATGAAGAGACACGCCCTCAGTGGCGAGGCGTTGCT
GGAGGTGGAGTACATGCCGGCGTTGCGACAGCCGACCGAAGCTGAGCACG
CCGAAGAGCCGGATTGGGTTAGCGCCGTGGCGGGGTGCGGGAAGGGCGTG
AAAACGTTCGTGACCGGGTGCTACGATGGCTTCCTGCGCGTGTACGGCCC
CGACTGTAAGCCGGATTGGGTTAGCGCCGTGGCGGGGTGCGGGAAGGGCG
TGAAAACGTTCGTGACCGGGTGCTACGATGGCTTCCTGCGCGTGTACGGC
CCCGACTGTAAGGAAGTGTCAACAGCGAAGGCGCATAGGTCACCGGTGAC
AGGTTTGTGCGCGGTGCCCTCCGCTGGCGGCATAAACGGCGCGGGATTGT
TGAGCGGCAGCAAGGATATGACCGGTCGCATGTGGAGGATCCACGGGTCC
GGGAGGAAGTGTCAACAGCGAAGGCGCATAGGTCACCGGTGACAGGTTTG
TGCGCGGTGCCCTCCGCTGGCGGCATAAACGGCGCGGGATTGTTGAGCGG
CAGCAAGGATATGACCGGTCGCATGTGGAGGATCCACGGGTCCGGGAGCA
ACGCCTCCTTGGAGGCGGCAGCTGTGCTCCGCGGCCACGACAGCAGCATC
TCGGCGGTGCACGCGTCCGAAAGCATGGCGTACACTGGAGACTGGGGCGG
GCACGTGTGCATGTGGGATGTCTCCTGTCTCGGGGCTGGCGCGGACCGTG
GCGAGGTTTCCAACAAGCAACGCCTCCTTGGAGGCGGCAGCTGTGCTCCG
CGGCCACGACAGCAGCATCTCGGCGGTGCACGCGTCCGAAAGCATGGCGT
ACACTGGAGACTGGGGCGGGCACGTGTGCATGTGGGATGTCTCCTGTCTC
GGGGCTGGCGCGGACCGTGGCGAGGTTTCCAACAAGGGGACGAAACGCCG
AAAAACCGGAAGCAACGAGACGGAGGCGGTGGCACTCTTGGAGCCTTCTC
CCGTGGCGAGGTTTCGAGGTCATGCTCAGGCGGTGACGGGGCTGGCCAGT
CCGGTGGGTGGTCAACCCCAGCAGCAGCTACTGTACAGCGCATCGCTCGA
CCGGGCGGTAAAGACGTGGGATACCGAGAGGCAGGACTGTGTCCACACCC
TCAACACGCCGAGGGCGATCACGTGCCTGGGTTGCTCCTCTAGCGGACGG
GGACGAAACGCCGAAAAACCGGAAGCAACGAGACGGAGGCGGTGGCACTC
TTGGAGCCTTCTCCCGTGGCGAGGTTTCGAGGTCATGCTCAGGCGGTGAC
GGGGCTGGCCAGTCCGGTGGGTGGTCAACCCCAGCAGCAGCTACTGTACA
GCGCATCGCTCGACCGGGCGGTAAAGACGTGGGATACCGAGAGGCAGGAC
TGTGTCCACACCCTCAACACGCCGAGGGCGATCACGTGCCTGGGTTGCTC
CTCTAGCGGACGGATGTTGGCCACGGGGCACCCGGACGCGAGAGTCCGCA
TCTGGGACACTCGCATGAAGGGAGAGACGCTTACAAGGGCTTCTCTCAGT
TCCCACGTACAGTGGATCTCTGGCGTCGCCTGGGCGCCAGATTCGGAAAC
CATGGATGTTGGCCACGGGGCACCCGGACGCGAGAGTCCGCATCTGGGAC
ACTCGCATGAAGGGAGAGACGCTTACAAGGGCTTCTCTCAGTTCCCACGT
ACAGTGGATCTCTGGCGTCGCCTGGGCGCCAGATTCGGAAACCATGTTGC
TGAGTTGTTCTCACGACGGCGCCGTGAAGCTCTGGGACATTCGATCAACC
GTGCCGCTGCACAGCGCTCGAGCGCACGAGGGGAAGGCGTTTTGCTGCGG
CTGGCAGGATGGGAAGATCATCAGCGGAGGAGCGGATGGGGCGGTCAAGA
CGTTCGTTGTTCCCGAGAGCAGCAGGAGCAACAAGGACGACCCTTAGTTG
CTGAGTTGTTCTCACGACGGCGCCGTGAAGCTCTGGGACATTCGATCAAC
CGTGCCGCTGCACAGCGCTCGAGCGCACGAGGGGAAGGCGTTTTGCTGCG
GCTGGCAGGATGGGAAGATCATCAGCGGAGGAGCGGATGGGGCGGTCAAG
ACGTTCGTTGTTCCCGAGAGCAGCAGGAGCAACAAGGACGACCCTTAG
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