mRNA_H-elongata_contig159530.3837.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: D7FPA4_ECTSI (Uncharacterized protein n=4 Tax=Eukaryota TaxID=2759 RepID=D7FPA4_ECTSI) HSP 1 Score: 257 bits (657), Expect = 1.510e-86 Identity = 127/131 (96.95%), Postives = 130/131 (99.24%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGP RFSNVDIRVRVRGGGYTSQIYAIRQ+IAKAIVAFYQKYVDEASKREIKD+LMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR
Sbjct: 16 KKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKDLLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 146
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: A0A7S2XX35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX35_9STRA) HSP 1 Score: 239 bits (610), Expect = 2.210e-79 Identity = 115/131 (87.79%), Postives = 127/131 (96.95%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTATAVAYCKRGRGLIKVNGCPIEL++P +LR+KTFEPVLLLG RF+NVDIRVRV+GGGYT+QIYAIRQ+IAKAIVA+YQKYVDEASK+EIKDILM+YDR LLVADPRRCEPKKFGGPSARARYQKSYR
Sbjct: 16 KKTATAVAYCKRGRGLIKVNGCPIELVQPEMLRLKTFEPVLLLGQQRFANVDIRVRVKGGGYTAQIYAIRQAIAKAIVAYYQKYVDEASKKEIKDILMSYDRALLVADPRRCEPKKFGGPSARARYQKSYR 146
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: A0A7R9YFZ9_9STRA (Hypothetical protein n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9YFZ9_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.470e-76 Identity = 109/131 (83.21%), Postives = 125/131 (95.42%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTATAVAYCK GRGLIK+NGCPIE LEP +LR+KT+EPVLLLG RF++VDIR+RV+GGGY++QIYAIRQ+IAK+IVA+YQKYVDEASKREIKDI +AYDR+LLVADPRRCEPKKFGGPSARARYQKSYR
Sbjct: 16 KKTATAVAYCKEGRGLIKINGCPIENLEPRVLRLKTYEPVLLLGNQRFADVDIRIRVKGGGYSAQIYAIRQAIAKSIVAYYQKYVDEASKREIKDIFLAYDRSLLVADPRRCEPKKFGGPSARARYQKSYR 146
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: F0YH48_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH48_AURAN) HSP 1 Score: 231 bits (588), Expect = 4.520e-76 Identity = 111/131 (84.73%), Postives = 124/131 (94.66%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTATAVAYCK+GRGLIKVNGCPIELLEP ILR+KTFEPVLLLG +RF+NVDIR+RV+GGG+T+QIYAIRQSIAKA+VA+YQKYVDEASK EI+DILM+YDR LLVAD RRCE KKFGGP ARARYQKSYR
Sbjct: 13 KKTATAVAYCKQGRGLIKVNGCPIELLEPEILRLKTFEPVLLLGQHRFANVDIRIRVKGGGFTAQIYAIRQSIAKALVAYYQKYVDEASKTEIRDILMSYDRTLLVADARRCESKKFGGPGARARYQKSYR 143
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: A0A7S3ZMH9_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S3ZMH9_9STRA) HSP 1 Score: 230 bits (586), Expect = 9.120e-76 Identity = 110/131 (83.97%), Postives = 123/131 (93.89%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+K ATAVAYCK+GRGLIKVNGCPIELLEP ILR+KTFEPVLLLG RF+NVDIR+RV+GGG+T+QIYAIRQ+IAK++VA+YQKYVDEASK EI+DILM YDR LLVADPRRCE KKFGGPSARARYQKSYR
Sbjct: 13 KKAATAVAYCKQGRGLIKVNGCPIELLEPEILRLKTFEPVLLLGQTRFANVDIRIRVKGGGFTAQIYAIRQAIAKSLVAYYQKYVDEASKTEIRDILMQYDRTLLVADPRRCESKKFGGPSARARYQKSYR 143
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: A0A7S0J187_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J187_9EUKA) HSP 1 Score: 228 bits (582), Expect = 4.100e-75 Identity = 106/131 (80.92%), Postives = 124/131 (94.66%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTA AV+YCK+GRGLIK+NGCPIEL+EP ILR K +EP+LLLGP+RF+NVDIR+RV+GGGYT+QIYAIRQ+IAK++VA+YQKYVDEASKREIKDIL +YDR+LLVADPRRCEPKKFGGP ARAR QKSYR
Sbjct: 16 KKTAVAVSYCKKGRGLIKINGCPIELVEPEILRHKVYEPILLLGPDRFANVDIRIRVKGGGYTAQIYAIRQAIAKSVVAYYQKYVDEASKREIKDILTSYDRSLLVADPRRCEPKKFGGPGARARRQKSYR 146
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: H3G8T5_PHYRM (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=H3G8T5_PHYRM) HSP 1 Score: 224 bits (571), Expect = 1.820e-73 Identity = 109/131 (83.21%), Postives = 122/131 (93.13%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+K ATAVAYCKRG GLIKVNG PIEL+EP ILRVKT+EPVLLLG RF+NVDIR+RV+GGG+T+QIYAIRQ+IAKAIVA+YQKYVDEASK+EIKDIL+AYDR LLVADPRRCE KKFGG SARAR+QKSYR
Sbjct: 14 KKNATAVAYCKRGHGLIKVNGTPIELVEPEILRVKTYEPVLLLGQQRFANVDIRIRVKGGGHTAQIYAIRQAIAKAIVAYYQKYVDEASKKEIKDILLAYDRTLLVADPRRCEAKKFGGGSARARFQKSYR 144
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: A0A4P9XXI0_9FUNG (40S ribosomal protein S16 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXI0_9FUNG) HSP 1 Score: 221 bits (564), Expect = 1.860e-72 Identity = 105/131 (80.15%), Postives = 120/131 (91.60%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTATAVA+CKRG G+I+VNG PIEL+EP ILR K +EPVL+LG RF N+DIRVRV+GGG+TSQ+YAIRQ+IAKAIVAFYQK+VDEA+K+EIKDIL YDRNLLVADPRRCEPKKFGGP ARARYQKSYR
Sbjct: 10 KKTATAVAHCKRGNGMIRVNGSPIELVEPEILRYKVYEPVLILGEERFRNLDIRVRVKGGGHTSQVYAIRQAIAKAIVAFYQKFVDEAAKKEIKDILTTYDRNLLVADPRRCEPKKFGGPGARARYQKSYR 140
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: I1JE09_SOYBN (Uncharacterized protein n=23 Tax=cellular organisms TaxID=131567 RepID=I1JE09_SOYBN) HSP 1 Score: 222 bits (565), Expect = 2.230e-72 Identity = 105/131 (80.15%), Postives = 119/131 (90.84%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTA AV YCKRGRGLIK+NGCPIEL+EP ILR K FEP+LLLG +RF+ VD+R+RV+GGG+TSQIYAIRQSIAKA+VAFYQKYVDE SK+EIKDIL+ YDR LLVADPRRCEPKKFGG ARAR+QKSYR
Sbjct: 26 KKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 156
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Match: A0A7S4HKN5_9EUKA (Hypothetical protein n=2 Tax=Prymnesiaceae TaxID=418967 RepID=A0A7S4HKN5_9EUKA) HSP 1 Score: 221 bits (564), Expect = 3.060e-72 Identity = 102/131 (77.86%), Postives = 122/131 (93.13%), Query Frame = 1
Query: 1 QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNVDIRVRVRGGGYTSQIYAIRQSIAKAIVAFYQKYVDEASKREIKDILMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 393
+KTA AV+YCK+GRGLIKVNGCPIEL+EP +LR K FEP+LLLG RF+N+DIR+RV+GGGYTSQIYAIRQ+IAK++V++YQKYVDEASK+EI++IL+ YDR+LLVADPRRCEPKKFGGP ARAR QKSYR
Sbjct: 25 KKTAVAVSYCKKGRGLIKVNGCPIELVEPEVLRYKVFEPILLLGKERFANMDIRIRVKGGGYTSQIYAIRQAIAKSVVSYYQKYVDEASKQEIREILVQYDRSLLVADPRRCEPKKFGGPGARARRQKSYR 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159530.3837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig159530.3837.1 >prot_H-elongata_contig159530.3837.1 ID=prot_H-elongata_contig159530.3837.1|Name=mRNA_H-elongata_contig159530.3837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp QKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPNRFSNback to top mRNA from alignment at H-elongata_contig159530:149..946+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig159530.3837.1 ID=mRNA_H-elongata_contig159530.3837.1|Name=mRNA_H-elongata_contig159530.3837.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=798bp|location=Sequence derived from alignment at H-elongata_contig159530:149..946+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig159530:149..946+ >mRNA_H-elongata_contig159530.3837.1 ID=mRNA_H-elongata_contig159530.3837.1|Name=mRNA_H-elongata_contig159530.3837.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=792bp|location=Sequence derived from alignment at H-elongata_contig159530:149..946+ (Himanthalia elongata Himel1 dioecious)back to top |