mRNA_H-elongata_contig159032.3815.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig159032.3815.1
Unique NamemRNA_H-elongata_contig159032.3815.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: D8LTW2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW2_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 8.320e-152
Identity = 210/249 (84.34%), Postives = 224/249 (89.96%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            DCLNFCFWPTPGLEYEHLAFGLKAA+QRDPLALSADRLA A E TIR WFSGF IPQISERAAKLRE+GCVLQAHFGGEAA LVARAARS ARLVRL+TCLLPGFRDE LH+G+QCFFYKRAQILAADLWAAYGRPPPGS S YAFED+G+LTMFADYRVPQ+L HLGV++YS ALE  I     L  GSEEEVEIRA C+QAVEGLR ALAR +V VTSVEIDWRLWHEGERIKKDI+PHHRTL+CFY
Sbjct:   89 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLAVATEETIRGWFSGFEIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDETLHQGRQCFFYKRAQILAADLWAAYGRPPPGSGSLYAFEDIGELTMFADYRVPQVLAHLGVLEYSQALETKIDGLERLQPGSEEEVEIRAMCVQAVEGLRAALARRNVVVTSVEIDWRLWHEGERIKKDIQPHHRTLTCFY 337          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A836CCJ7_9STRA (Queuosine salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ7_9STRA)

HSP 1 Score: 295 bits (754), Expect = 9.540e-97
Identity = 147/249 (59.04%), Postives = 175/249 (70.28%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWPTPGLEYEHLA GL  AL+ DP ALSA  L++A    +  W  GF +PQ++ER +K+RE+G VL AHFGG A+N+V  A  S   L+RLIT LLPGFRDEA++RG Q F YKRAQI+ ADLWAAYG      L  + F D+ +LTMFADYRVPQ+L H G + Y+ AL   I +  ELPAG EEEVEIRAA +QAVE +  A+  L   + SVE+DW LWH GE  K  I PHHRTLS FY
Sbjct:   74 DALNFCFWPTPGLEYEHLASGLARALEADPRALSAAVLSAATPALLASWAPGFALPQMAERVSKVRELGAVLGAHFGGLASNMVQAAGGSAVNLIRLITALLPGFRDEAVYRGSQVFLYKRAQIVVADLWAAYGCRGADQL--FGFRDMAELTMFADYRVPQVLAHAGALVYAPALRQRIESLQELPAGGEEEVEIRAATVQAVERVAEAMKALGAPLLSVELDWLLWHRGEASKDTIAPHHRTLSIFY 320          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A5D6YCF7_9STRA (Queuosine salvage protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCF7_9STRA)

HSP 1 Score: 271 bits (692), Expect = 2.430e-87
Identity = 136/249 (54.62%), Postives = 169/249 (67.87%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWPT  +EYEHLA GLK AL RDP AL A+RL S +  T+  WF  F  PQ+ ER  K++E+G VLQ  FGG+A NL+ARA  S    VRL+   LPGFRD+A++RG+Q  FYKRAQIL  D+WAAYGR   G  S   F D+  LTMFADYRVPQ+L   GV++YS+ L   + +  E+P+GSE EVEIRAA IQAVE +   +  L  ++  VE+DW LW  GE  K  + PHHRTL+ +Y
Sbjct:   76 DALNFCFWPTEHMEYEHLARGLKDALLRDPHALDAERLVSVSSETLMSWFCPFTPPQVDERKRKIQELGEVLQHGFGGQALNLIARAEGSAVEAVRLVLANLPGFRDQAVYRGEQVHFYKRAQILVGDVWAAYGRRSTGVAS---FHDIAQLTMFADYRVPQVLRPEGVLEYSEPLARLVDSKTEIPSGSEMEVEIRAATIQAVEQIHAQMEELGHSLKVVELDWLLWQIGEGRKDALLPHHRTLTVYY 321          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A7S0P787_CAFRO (Queuosine salvage protein n=4 Tax=Sar TaxID=2698737 RepID=A0A7S0P787_CAFRO)

HSP 1 Score: 268 bits (686), Expect = 5.190e-86
Identity = 137/250 (54.80%), Postives = 176/250 (70.40%), Query Frame = 1
Query:    1 DCLNFCFWPTP-GLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LN+CFWP+   +EY+ LA GL+ A++ DP   SA+RL  A    +R W +  ++P+  ERA  LRE+G VL A +GG+AANLV+   +S  RLV L+   LPGFRDE ++RG++ F YKRAQILAAD+WAAYGR   G  SP+AF D+  LTMFADYRVPQ+L+ +GV++YS ALEA I A  EL  GSEEEVEIRAA +QAVE LR+A+      + SVE+DW LW  GER K+ + PHHRT +  Y
Sbjct:  107 DSLNWCFWPSATSMEYDALAVGLRKAVEADPSVFSAERLQGATAADVRGWLAPHDVPEAEERAEMLRELGHVLAAEYGGQAANLVSACGQSACRLVALLASRLPGFRDETVYRGRRVFLYKRAQILAADVWAAYGRLTSGP-SPFAFRDMASLTMFADYRVPQLLLPMGVLRYSPALEARIAAQEELCPGSEEEVEIRAASVQAVEKLRHAMGG---TLLSVELDWLLWQRGERSKEKLPPHHRTRTVCY 352          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A4D9CUX0_9STRA (Queuosine salvage protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUX0_9STRA)

HSP 1 Score: 266 bits (681), Expect = 7.140e-85
Identity = 147/292 (50.34%), Postives = 177/292 (60.62%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWF----------------------------------------SGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYG--RPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNAL-ARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWPTPGLEYEHLA GL+ AL+RDP A +A  LAS +  T+  W                                         S F +P +SER  K+RE+G VL  HF G+AA+LV  +  S   LVRL++   P FRDEALH+G+Q +FYKRAQIL AD+WAAYG    PP    PYAF D+G+LTMFADYRVPQIL   GV++Y+  L   +    ELPAGSEEEVEIRAA +QAVE +R    A     + SVE+DW LW EGER +  + PHHRTLS FY
Sbjct:   94 DALNFCFWPTPGLEYEHLARGLRRALERDPTAFNAQALASVSPATVAGWVDCPSPPSPSHLSTSTPPTGPGPATGARGTSPPSSPASSPPSSF-LPCLSERVRKVREVGHVLLQHFNGQAADLVRASGFSAVELVRLLSAFFPSFRDEALHQGEQVYFYKRAQILVADIWAAYGCRTDPP---FPYAFRDMGELTMFADYRVPQILRGRGVLRYAPGLAERVDGREELPAGSEEEVEIRAATVQAVESMREVWRAGGKGEILSVELDWLLWQEGERYRDSLPPHHRTLSIFY 381          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A0P1A8J2_PLAHL (Queuosine salvage protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8J2_PLAHL)

HSP 1 Score: 262 bits (669), Expect = 7.130e-84
Identity = 132/249 (53.01%), Postives = 163/249 (65.46%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWPT  +EYEHLA GLKAAL RDP AL A+ LA+  + T+  WFS +  PQ+ ER  K++E+G VL  HF G+A NL+  A  S    +RL+     GF+D AL++G+Q  FYKRAQIL  D+WAAYGR   G  S   F D+G LTMFADYRVPQ+L    VI YS  L   +   VE+P+GSE EVEIRAA IQAVE +   L      +  +E+DW LW  GE+ KKD+ PHHRT S +Y
Sbjct:   75 DALNFCFWPTKDMEYEHLARGLKAALLRDPHALDAENLANVTKETVASWFSPYTPPQLDERQRKVQEVGVVLLKHFDGKALNLIKSARCSAVEAIRLVLAYFSGFQDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSGITS---FHDIGKLTMFADYRVPQVLRSDCVIHYSPELAQIVDGKVEIPSGSEMEVEIRAATIQAVEQIHQQLISKGYCLHIIELDWLLWQIGEKNKKDLLPHHRTWSIYY 320          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A329RBU5_9STRA (Queuosine salvage protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RBU5_9STRA)

HSP 1 Score: 261 bits (666), Expect = 2.030e-83
Identity = 131/249 (52.61%), Postives = 160/249 (64.26%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWPT  +EYEHLA GLK AL RDP  L AD LA     T+  WF  F  PQ+ ER  K+RE+G VLQ  F G+A NL+ +A  S    +RL+    PGFRD AL++G+Q  FYKRAQIL  D+WAAYGR   G  S   F D+G LTMFADYRVPQ+L   GV+ YS  L   +    E+PAGSE E+EIRAA IQAVE +   +     ++  +E+DW LW  GE  K+D+ PHHRT S +Y
Sbjct:   75 DALNFCFWPTQYMEYEHLARGLKTALLRDPHVLDADNLAMVTNETVTSWFHPFTPPQLDERRRKVREVGEVLQKFFDGQALNLIKKANFSAVEAIRLVLAYFPGFRDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSGIAS---FHDIGKLTMFADYRVPQVLRPEGVLVYSSKLAELVDNKAEIPAGSEMELEIRAATIQAVEQIHKQMINRGHHLEVIELDWLLWQIGEDNKEDLLPHHRTWSIYY 320          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: H3G7J8_PHYRM (Queuosine salvage protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7J8_PHYRM)

HSP 1 Score: 258 bits (658), Expect = 2.120e-82
Identity = 130/249 (52.21%), Postives = 162/249 (65.06%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWPT  +EYEHLA GLK AL  DP AL A+ LA+    T+  WF  F  PQ+ ER  K+RE+G VLQ  F G A NL+ +A  S    +RL+    PGFRD A+++G+Q  FYKRAQIL  D+WAAYGR   G  S   F D+  LTMFADYRVPQ+L   GV+ YS  L   + +  E+PAGSE E+EIRAA IQAVE + N +A    ++  +E+DW LW  GE  K+D+ PHHRT S +Y
Sbjct:   61 DALNFCFWPTENMEYEHLARGLKTALVNDPHALDAENLATVTNETVASWFHPFTPPQLDERRRKIREVGDVLQYFFDGRAMNLIKQANFSAVEAIRLVLANFPGFRDHAVYKGEQVHFYKRAQILVGDVWAAYGRRTSGIAS---FHDISKLTMFADYRVPQVLRPEGVMVYSADLAKLVDSKGEIPAGSEMELEIRAATIQAVEMIHNHMAHQGHHLQVIELDWLLWQIGEDNKEDLLPHHRTWSIYY 306          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A0M8K9E5_9CHLR (Uncharacterized protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8K9E5_9CHLR)

HSP 1 Score: 258 bits (658), Expect = 2.400e-82
Identity = 128/249 (51.41%), Postives = 166/249 (66.67%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWP PGLEYEHLA GLK A++ DP    A+RL     + +R W  G  +PQ+ ER   +RE+G  L AHFGG+AANLV+ A  S ARLV L+T   PGFRD A++ G+Q FFYKRAQI AAD+W A+     G      F+DV ++TMFADYRVPQ L   GV+ Y+  L   + A  E+  GS EE+EIRAA +QAVE LR+ LA+   +V +V++DW LW   E +++ + PHHRTL+ +Y
Sbjct:   68 DALNFCFWPKPGLEYEHLALGLKRAIEADPHVFDAERLVQVEADDLRRWV-GAELPQMEERVRLVREVGAGLLAHFGGQAANLVSAADHSAARLVSLLTAHFPGFRDHAVYDGRQVFFYKRAQIFAADVWGAFNGAGLGR-----FDDVHEMTMFADYRVPQYLRARGVLVYAPPLAEKVDARQEIAPGSPEEIEIRAATVQAVEHLRSLLAQRGYDVPAVQVDWLLWERAEAVRESLPPHHRTLTIYY 310          
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Match: A0A7S2UWC3_9STRA (Queuosine salvage protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWC3_9STRA)

HSP 1 Score: 258 bits (660), Expect = 8.800e-82
Identity = 126/249 (50.60%), Postives = 170/249 (68.27%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWFSGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITCLLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVGDLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAACIQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY 747
            D LNFCFWPT GLEYEHLA  LK  L  DP A +A  L +  E+ ++ W  G +IP I  R   LR++G VL   + G A  +V  +  S ++LV+++   +P FRDE+++ G+Q FFYKRAQILAAD+W A+GR   G +    F D+ ++TMFADYRVPQIL H GV++YS  L   I +  E+PAGS+ E+EIRAA IQAVE L++ L +  V +TSVEIDW LW EGE++K++I+ HH+T + FY
Sbjct:  129 DSLNFCFWPTKGLEYEHLAIALKNVLIGDPAAFNASNLVNIKESELQKWLPGVDIPLIHARVTALRQLGAVLLNSYDGLAIKMVEESNNSASKLVQMVVSSIPSFRDESVYNGEQVFFYKRAQILAADIWGAFGRQSKGHIC--GFSDMEEVTMFADYRVPQILEHRGVLKYSQRLCQMIVSEEEIPAGSDMEIEIRAATIQAVEMLQHILEKNDVKLTSVEIDWLLWQEGEKLKENIQKHHKTRTMFY 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159032.3815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW2_ECTSI8.320e-15284.34Queuosine salvage protein n=2 Tax=Ectocarpus TaxID... [more]
A0A836CCJ7_9STRA9.540e-9759.04Queuosine salvage protein n=1 Tax=Tribonema minus ... [more]
A0A5D6YCF7_9STRA2.430e-8754.62Queuosine salvage protein n=1 Tax=Pythium brassicu... [more]
A0A7S0P787_CAFRO5.190e-8654.80Queuosine salvage protein n=4 Tax=Sar TaxID=269873... [more]
A0A4D9CUX0_9STRA7.140e-8550.34Queuosine salvage protein n=1 Tax=Nannochloropsis ... [more]
A0A0P1A8J2_PLAHL7.130e-8453.01Queuosine salvage protein n=1 Tax=Plasmopara halst... [more]
A0A329RBU5_9STRA2.030e-8352.61Queuosine salvage protein n=2 Tax=Phytophthora Tax... [more]
H3G7J8_PHYRM2.120e-8252.21Queuosine salvage protein n=1 Tax=Phytophthora ram... [more]
A0A0M8K9E5_9CHLR2.400e-8251.41Uncharacterized protein n=2 Tax=Ardenticatenia Tax... [more]
A0A7S2UWC3_9STRA8.800e-8250.60Queuosine salvage protein n=1 Tax=Fibrocapsa japon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159032contigH-elongata_contig159032:624..1373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.1
Seed ortholog evalue1.4e-120
Seed eggNOG ortholog2880.D8LTW2
Preferred nameC9orf64
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008477,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016798,GO:0016799,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0101030,GO:1901360
EggNOG free text desc.Chromosome 9 open reading frame 64
EggNOG OGsKOG2524@1,KOG2524@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF2419
Ec32 orthologEc-12_004090.1
Exons1
Model size750
Cds size750
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929936.2755945-CDS-H-elongata_contig159032:623..13731622929936.2755945-CDS-H-elongata_contig159032:623..1373Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig159032 624..1373 -
1691679214.5205562-CDS-H-elongata_contig159032:623..13731691679214.5205562-CDS-H-elongata_contig159032:623..1373Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig159032 624..1373 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159032.3815.1prot_H-elongata_contig159032.3815.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig159032 624..1373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig159032.3815.1

>prot_H-elongata_contig159032.3815.1 ID=prot_H-elongata_contig159032.3815.1|Name=mRNA_H-elongata_contig159032.3815.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
DCLNFCFWPTPGLEYEHLAFGLKAALQRDPLALSADRLASANENTIRDWF
SGFNIPQISERAAKLREMGCVLQAHFGGEAANLVARAARSTARLVRLITC
LLPGFRDEALHRGQQCFFYKRAQILAADLWAAYGRPPPGSLSPYAFEDVG
DLTMFADYRVPQILVHLGVIQYSDALEATIGAGVELPAGSEEEVEIRAAC
IQAVEGLRNALARLHVNVTSVEIDWRLWHEGERIKKDIRPHHRTLSCFY*
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mRNA from alignment at H-elongata_contig159032:624..1373-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig159032.3815.1 ID=mRNA_H-elongata_contig159032.3815.1|Name=mRNA_H-elongata_contig159032.3815.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=750bp|location=Sequence derived from alignment at H-elongata_contig159032:624..1373- (Himanthalia elongata Himel1 dioecious)
GACTGCCTTAACTTCTGCTTCTGGCCGACGCCGGGACTTGAGTACGAACA TCTTGCATTCGGGCTCAAGGCCGCCCTTCAGCGAGACCCCCTGGCCCTTT CGGCCGACCGCCTGGCGTCGGCGAACGAAAATACCATCCGCGACTGGTTC TCGGGCTTCAATATCCCCCAGATTTCGGAACGGGCCGCCAAGCTGCGAGA GATGGGCTGCGTCCTGCAGGCTCACTTCGGGGGCGAAGCGGCCAACCTCG TGGCCCGCGCCGCGCGGTCGACGGCGCGCTTGGTTCGGCTCATCACCTGC CTGCTCCCAGGCTTCCGGGACGAGGCCCTTCACCGGGGCCAGCAGTGTTT CTTCTACAAGCGCGCGCAGATCCTGGCGGCGGATCTATGGGCGGCATACG GACGCCCGCCCCCGGGGTCTCTGAGTCCGTATGCGTTCGAGGACGTCGGG GACCTGACGATGTTCGCGGACTACAGGGTGCCGCAGATCCTTGTCCATCT TGGAGTGATTCAGTACAGCGACGCGCTGGAGGCGACGATCGGGGCCGGGG TGGAGCTGCCGGCGGGAAGTGAGGAGGAGGTAGAGATTCGAGCGGCGTGC ATCCAGGCGGTGGAGGGGCTTCGCAACGCCCTGGCGAGGCTCCATGTGAA CGTGACAAGCGTGGAGATCGACTGGCGGCTGTGGCACGAGGGCGAGCGAA TCAAGAAGGATATCCGCCCACATCACCGAACGCTGAGCTGCTTTTATTGA
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Coding sequence (CDS) from alignment at H-elongata_contig159032:624..1373-

>mRNA_H-elongata_contig159032.3815.1 ID=mRNA_H-elongata_contig159032.3815.1|Name=mRNA_H-elongata_contig159032.3815.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig159032:624..1373- (Himanthalia elongata Himel1 dioecious)
GACTGCCTTAACTTCTGCTTCTGGCCGACGCCGGGACTTGAGTACGAACA
TCTTGCATTCGGGCTCAAGGCCGCCCTTCAGCGAGACCCCCTGGCCCTTT
CGGCCGACCGCCTGGCGTCGGCGAACGAAAATACCATCCGCGACTGGTTC
TCGGGCTTCAATATCCCCCAGATTTCGGAACGGGCCGCCAAGCTGCGAGA
GATGGGCTGCGTCCTGCAGGCTCACTTCGGGGGCGAAGCGGCCAACCTCG
TGGCCCGCGCCGCGCGGTCGACGGCGCGCTTGGTTCGGCTCATCACCTGC
CTGCTCCCAGGCTTCCGGGACGAGGCCCTTCACCGGGGCCAGCAGTGTTT
CTTCTACAAGCGCGCGCAGATCCTGGCGGCGGATCTATGGGCGGCATACG
GACGCCCGCCCCCGGGGTCTCTGAGTCCGTATGCGTTCGAGGACGTCGGG
GACCTGACGATGTTCGCGGACTACAGGGTGCCGCAGATCCTTGTCCATCT
TGGAGTGATTCAGTACAGCGACGCGCTGGAGGCGACGATCGGGGCCGGGG
TGGAGCTGCCGGCGGGAAGTGAGGAGGAGGTAGAGATTCGAGCGGCGTGC
ATCCAGGCGGTGGAGGGGCTTCGCAACGCCCTGGCGAGGCTCCATGTGAA
CGTGACAAGCGTGGAGATCGACTGGCGGCTGTGGCACGAGGGCGAGCGAA
TCAAGAAGGATATCCGCCCACATCACCGAACGCTGAGCTGCTTTTATTGA
GACTGCCTTAACTTCTGCTTCTGGCCGACGCCGGGACTTGAGTACGAACA
TCTTGCATTCGGGCTCAAGGCCGCCCTTCAGCGAGACCCCCTGGCCCTTT
CGGCCGACCGCCTGGCGTCGGCGAACGAAAATACCATCCGCGACTGGTTC
TCGGGCTTCAATATCCCCCAGATTTCGGAACGGGCCGCCAAGCTGCGAGA
GATGGGCTGCGTCCTGCAGGCTCACTTCGGGGGCGAAGCGGCCAACCTCG
TGGCCCGCGCCGCGCGGTCGACGGCGCGCTTGGTTCGGCTCATCACCTGC
CTGCTCCCAGGCTTCCGGGACGAGGCCCTTCACCGGGGCCAGCAGTGTTT
CTTCTACAAGCGCGCGCAGATCCTGGCGGCGGATCTATGGGCGGCATACG
GACGCCCGCCCCCGGGGTCTCTGAGTCCGTATGCGTTCGAGGACGTCGGG
GACCTGACGATGTTCGCGGACTACAGGGTGCCGCAGATCCTTGTCCATCT
TGGAGTGATTCAGTACAGCGACGCGCTGGAGGCGACGATCGGGGCCGGGG
TGGAGCTGCCGGCGGGAAGTGAGGAGGAGGTAGAGATTCGAGCGGCGTGC
ATCCAGGCGGTGGAGGGGCTTCGCAACGCCCTGGCGAGGCTCCATGTGAA
CGTGACAAGCGTGGAGATCGACTGGCGGCTGTGGCACGAGGGCGAGCGAA
TCAAGAAGGATATCCGCCCACATCACCGAACGCTGAGCTGCTTTTATTGA
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