mRNA_H-elongata_contig15882.3808.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: D7G3Q5_ECTSI (Type I fatty acid synthase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q5_ECTSI) HSP 1 Score: 782 bits (2019), Expect = 5.470e-254 Identity = 455/806 (56.45%), Postives = 541/806 (67.12%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRNSTNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASKHFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQYISRKAEKSFKLRGFP-----DGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGVCAREPNLAGLSLSDISDEDLECVGVLDDLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELPSCFDREVFLRTGDLARIDR--AGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEVVMEVRKSAEQGASILAEGMEAVRRAIIAEGCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVLGLSTPTPTSTSTPPTVEQDLTPVENTLP---------------------------------VSSSTPRSPLNMKCL------------------------AARP---GEIGACTASRKTSV----------EQDPEQAARKVVEKDAEKGMEAG--------SLLERQRAERMAALTGLVVDTAAEVLKGVTISPEQALFDAGFDSVTAEEFVGRLRECLSNHGWIAGGPREAEAILSSTTLFDCPTARQMAEHIEGVLISTGRAGTG 2163
PPSPLTLSKSL KLQ +V+AC+P+++L+S D+N LRL SK N +SSARRLWPDLPY + A + + G + G +G + FDEESLGE DVAFLQFTSGSTSEPKGVM+TF NL HNA++ISR +EKSF+ RGF +G +RGFSWLPQYHDLGL+MCTLTPFVSGWRMGY+SPLDFVR+PLLWLRL+S ER +F CAPDFSLRLCVRKW N TPE RASMT+++DLSAL WIQNGAEP+RASSIRDF + F +GLS +Y G AYGLAEHVVGVC E NL LS+++DEDLECVG L+ LSE SK K+ +P TRREVA+GE+GELWLSSPSVA GYWG+PELTEEAF AR + GE VFLRTGDLAR++ +GR+FI GR+KDLII+RGRN+YPQDVEFA QEAS IVRPGC+AAFS +ELG ELEVV+EVRKSAE L+EG+EAVRRAI +EGCYP R+VAI+E+TIPKTTSGKIQRRR+RE LH G L V+ T + P L P +T VS+S P P A++P G GA TA S+ QD + R V + +A G AG SLL RQ+ ER+ ALT LVV TA +VL+G ISP+QALFDAGFDS+TAEEFVGRL+E LS+ GW++GG AEA++SSTT+FDCPTAR +AEH+EG L TG AG G
Sbjct: 4 PPSPLTLSKSLTKLQGIVEACDPKVILISGDVNHLRLASKLNFVSSARRLWPDLPY--KVARSSGVSQWGGHLEVARGGGGQ------PGRKGVGVES---FDEESLGEGDVAFLQFTSGSTSEPKGVMVTFGNLGHNARFISRMSEKSFESRGFSFSGRAEGGGVRGFSWLPQYHDLGLVMCTLTPFVSGWRMGYMSPLDFVRKPLLWLRLLSAERAMFGCAPDFSLRLCVRKW--NEATPEVRASMTDSVDLSALNWIQNGAEPIRASSIRDFAATFEGLGLSPAYCGTAYGLAEHVVGVCQHEANLGRRPLSELTDEDLECVGQLERLSEGSKLKIVDPETRREVALGEVGELWLSSPSVAAGYWGQPELTEEAFNARVVGEEQ-GEGSDNPTGTVFLRTGDLARLETGGSGRLFISGRIKDLIIVRGRNLYPQDVEFAVQEASSIVRPGCVAAFSTTELGGELEVVLEVRKSAEGDPDGLSEGLEAVRRAIASEGCYPSRVVAIKEKTIPKTTSGKIQRRRSREMLHQGALSVI-------TELTAP---SGALEPASSTXXXXXXXXXXXXXXXXXXXESGXXXXXXXXXLSSWVSASVPVPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXPTASQPPTGGSEGAATAGSTDSLGAYQEGGEGLRQDQLRGPRGVGDDNA--GGAAGRESSDGDASLLSRQKDERLDALTKLVVSTATDVLRGRAISPDQALFDAGFDSITAEEFVGRLQERLSSGGWVSGGLPGAEAVVSSTTVFDCPTARHIAEHVEGALSKTG-AGDG 782
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: A0A6H5J7K1_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K1_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 1.570e-159 Identity = 266/536 (49.63%), Postives = 347/536 (64.74%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRN--STNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASKHFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQYISRKAEKSFKLRG-FPDGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGVCAREPNLAGLSLSDISDEDLECVGVLD-DLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELPSCFDREVFLRTGDLARIDRAGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEVVMEVRKSAEQGASILAEGMEAVRRAIIAE-GCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVL 1593
PP+P TL KSL KLQ +VD C P++ L+ P +N+LRL SK +++ + WPDL Y +T G S W G G +A FD+ ++ DVAFLQFTSGSTS+PKGVM+T+ NL HN I + RG DG+R FSWLP +HD+GLI TL PFV+GW Y SP+ F+RRPL+WL LMSKE++ + APDF+ RLC+RKW ++PE+R ++ LDL + ++QN AEPVR+S++RDF AFAA+GL AYGLAEH VG + PN G L + DE L+ G + S + K+ +P T REV GE GE+W+SS SVA GYWGKPELT FRAR A G L + FLRTGDL R+D G +++ GR+KDL+I+ GRNIYPQD+EF AQ+AS +VRPGCIA FS++ELG LE+VMEVR +++ + E +EAVRR++++E G P R+VAI+ERTIPKTTSGKIQRR+TR LHAG L+V+
Sbjct: 71 PPNPATLKKSLKKLQLIVDDCAPKMALVCPLVNKLRLASKLRAVATGKSGWPDLTYHCPDVKEEKIATGGMSSSGVG-------WRS--GGGRSADVKRTRPSFDDPTIKPQDVAFLQFTSGSTSDPKGVMLTYGNLTHNIGVIVNSSNAQIAARGEVADGQRT-WFSWLPTFHDMGLIQGTLAPFVAGWTAAYCSPITFMRRPLVWLELMSKEKSQMTAAPDFAFRLCLRKW--EEMSPESRTALH--LDLKHIMFMQNAAEPVRSSTVRDFAEAFAAVGLPGYASNAAYGLAEHTVGCASFSPNPGGGGLRHVPDERLQASGDIHFSASLHMDIKIVDPETCREVPTGETGEMWISSDSVAAGYWGKPELTRGTFRARIKYDSADGSLSPPWANSEFLRTGDLCRVDAEGLLYVEGRLKDLVIVAGRNIYPQDIEFVAQDASSLVRPGCIAVFSETELGGGLEIVMEVRSLSKKNVHAVTEALEAVRRSVMSESGLAPSRVVAIKERTIPKTTSGKIQRRKTRAMLHAGALEVV 592
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: D7G4W3_ECTSI (Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W3_ECTSI) HSP 1 Score: 494 bits (1271), Expect = 2.730e-154 Identity = 274/535 (51.21%), Postives = 354/535 (66.17%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRNSTNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASK-HFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQYISRKAEKSFKLRGFPDGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGVCAREPNLAGLSLSDISDEDLEC-VGVLDDLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGE-LPSCFDREVFLRTGDLARIDRAGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEVVMEVRKSAEQGASILAEGMEAVRRAIIAE-GCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVL 1593
PP+P TL KSL KLQ +VD+C P+++L+ P +N+LRL SK +++ WP L Y + T A++ W G G +G + FD+ ++ DVAFLQFTSGSTS+PKGVM+T+ NL HN I ++ RG P FSWLP +HD+GLI TL PFV+GW Y SP+ F+RRPL+WL LMSKE++ + APDF+ RLCVRKW ++PE+RA++ LDL + ++Q+G EPVRAS++RDF AFA +GL S AYGLAEH V A PN G SLS I DE L+ V V S+ K+ +P T REV VGE GE+W+SS SVA GYWGKPELT+ FRAR R +A G P D E FLRTGDL R+D G +++ GR+KDL+I+ GRNIYPQD+EF AQ+AS +VRPGCIA FS++ELG LE+VMEVR +++ + E +EAVRR++I+E G P R+VAI+ERTIPKTTSGKIQRR+TR LHAG LDV+
Sbjct: 77 PPNPATLKKSLQKLQLIVDSCTPKMILVCPLVNKLRLSSKLRAVATGNSDWPKLRYHCCPDVKGET-----------IAAAGWR---GGGSKQMGPETKRPSFDDPTIKPGDVAFLQFTSGSTSDPKGVMLTYGNLTHNIACIINSSDAQIAARGGPAEGNRTWFSWLPTFHDMGLIQGTLAPFVAGWTAAYCSPISFMRRPLMWLELMSKEKSQMTAAPDFAFRLCVRKW--KEMSPESRAALH--LDLRHIMFMQSGGEPVRASTVRDFAEAFATVGLPSYTSNAAYGLAEHTVACGAFSPNHGGGSLSRIPDERLQASVDVQYSNSQGGVIKIVDPETCREVPVGETGEMWISSDSVAAGYWGKPELTQGTFRARIERDVADGPPTPPWVDSE-FLRTGDLCRVDAEGLLYVEGRLKDLVIVAGRNIYPQDLEFVAQDASSLVRPGCIAVFSETELGGGLEIVMEVRDVSKKNPQAVREALEAVRRSVISECGLTPSRVVAIQERTIPKTTSGKIQRRQTRTMLHAGDLDVV 592
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI) HSP 1 Score: 491 bits (1265), Expect = 3.230e-150 Identity = 280/570 (49.12%), Postives = 366/570 (64.21%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRNS--TNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASKHFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQYISRKAEKSFKLRG-FPDGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGVCAREPNLAGLSLSDISDEDLECVGVLD-DLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELPSCFDREVFLRTGDLARIDRAGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEVVMEVRKSAEQGASILAEGMEAVRRAIIAE-GCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVLGLSTPTPTSTSTPPTVEQDLTPVENTLPVSSSTP 1695
PP+P TL +SL KLQ +VD+C P++VL+ P +N+LRL SK +++ + WPDLPY + T G S A+ W G G++A FD+ ++ DVAFLQFTSGSTS+PKGVM+T+ NL HN I + RG DG+R FSWLP +HD+GLI TLTPFV+GW Y SP+ F+RRPL+WL LMSKE++ + APDF+ RLCVRKW ++PE R ++ LDL + ++QN AEPVRAS++RDF AFAA+GL AYGLAEH VG + N G SL I DE L+ G + + K+ +P T REV GE GE+W+SS SVA GYWGKPELT+ FRAR A G P + FLRTGDL R+D G +++ GR+KDL+I+ GRNIYPQD+EF AQ+AS +VRPGCIA FS++ELG LE+VMEVR +++ + E +EAVRR++++E G P R+VAI+ERTIPKTTSGKIQRR+TR LHAG L+V+ P T PP + TP+ + SS+ P
Sbjct: 539 PPNPATLKRSLKKLQLIVDSCAPKMVLVCPLVNKLRLASKLRAVATGKSGWPDLPYHCPDVKEENIPTGGMSS-------ATVGWRS--GGGKSADVKRTRPSFDDPTIKPQDVAFLQFTSGSTSDPKGVMLTYGNLTHNIGVIVNSSNAQIAERGGVADGQRT-WFSWLPTFHDMGLIQGTLTPFVAGWTAAYCSPITFMRRPLVWLELMSKEKSQMTAAPDFAFRLCVRKW--EEMSPENRTALH--LDLKHIMFMQNAAEPVRASTVRDFAEAFAAVGLPGYASNAAYGLAEHTVGCASSSSNPGGGSLRHIPDERLQASGDIHFSAGLHMDIKIVDPETCREVPTGETGEMWVSSDSVAAGYWGKPELTQGTFRARIKCDSADGSPPPPWANSEFLRTGDLCRVDAEGLLYVEGRLKDLVIVAGRNIYPQDIEFVAQDASPLVRPGCIAVFSETELGGGLEIVMEVRSVSKKNTHAVTEALEAVRRSVMSESGLAPSRVVAIKERTIPKTTSGKIQRRKTRAALHAGALEVVQELRFDPVET--PPPAVRGPTPLSDREESSSTAP 1092
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: D7FH91_ECTSI (AMP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH91_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 1.740e-133 Identity = 228/467 (48.82%), Postives = 300/467 (64.24%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRNSTNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASK-HFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQYISRKAEKSFKLRGFPDGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGVCAREPNLAGL-SLSDISDEDLECVGVLDDLSENSKC--KVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELP-SCFDREVFLRTGDLARIDRAGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEV 1386
PP+P TL KSL LQ +V+ C P+++L+ P +N+LRL K ++++ + WP+LPY + G S R + +G F + FD+ ++ +DVAFLQFTSGSTS+PKGVM+T+ NL HN I + RG G FSWLP +HD+GLI TL PF++GW Y SP+ F+RRPL+WL LMSKE+T + APDF+ RLCVRKW ++ E+RA++ LDL + ++QN AEPVRAS++RDF FAA+GL + AYGLAEH VG + PNL G SLS+ISDE L+ G + S NS KV +P T REV VGE GE+W+SS SVA GYWGKPELT+E FRAR A P S + FLRTGDL R+D G +++ GR+KDL+I+ GRN+YPQD+EF AQ+AS +VRPGCIA FS++ELG +EV
Sbjct: 115 PPNPATLKKSLQNLQLIVEGCTPKMILVCPLVNKLRLAWKLRVVATGKSGWPNLPYHCPDVKEETIPTSGLAYTAVEWKS-RGSKSTDAGTKRPSFQMQRPSFDDPTIKPEDVAFLQFTSGSTSDPKGVMLTYGNLTHNIDAIINSSNAQIVERGGVPGGNRTWFSWLPTFHDMGLIQGTLVPFLAGWTAAYCSPITFMRRPLMWLELMSKEKTQMTAAPDFAFRLCVRKW--KEMSLESRAALH--LDLRPIMFMQNAAEPVRASTVRDFAETFAAVGLPAYASNAAYGLAEHTVGCASFSPNLGGRESLSNISDERLQASGDVH-ASANSHIGIKVIDPETCREVPVGETGEMWISSKSVAAGYWGKPELTQETFRARIKCDPAADGSPASPWVDSDFLRTGDLCRVDTEGLLYVEGRLKDLVIVAGRNVYPQDIEFVAQDASSLVRPGCIAVFSETELGGGVEV 575
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: A0A6H5KYS3_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS3_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 6.010e-131 Identity = 269/517 (52.03%), Postives = 330/517 (63.83%), Query Frame = 1
Query: 799 IRDFGSAFAAIGLSSSYPGVAYGLAEHVVGVCAREPNLAGLSLSDISDEDLECVGVLDDLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELPSCFDREVFLRTGDLARIDR--AGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEVVMEVRKSAEQGASILAEGMEAVRRAIIAEGCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVLG-LSTPTPTS-----------------------TSTPPTVEQDLTPVENTLPVSSSTPRSPLNMKCLA---------------------ARP---GEIGACTASR----------KTSVEQDPEQAARKVVEKDA---EKGMEAG----SLLERQRAERMAALTGLVVDTAAEVLKGVTISPEQALFDAGFDSVTAEEFVGRLRECLSNHGWIAGGPREAEAILSSTTLFDCPTARQMAEHIEGVLISTG 2148
IRDF + F +GLS +Y G AYGLAEHVVGVCA E NL G LS+++DEDLECVG L+ LS+ SK K+ +P TRREVA+GE+GELWLSSPSVA GYWG+PELTEEAF A + GE VFLRTGDLAR++ +GR+FI GR+KDLII+RGRN+YPQDVEFA QEA +VRPGC+AAFS +ELG ELEVV+EVR+SAE L+EG+EA+RRAI +EGCYP R+VAI+E+TIPKTTSGKIQRRR+RE LH G L V+ L+ P +S TS+ E VS+S P P + ++P G A TA + + Q+ + R + DA G E+ SLL RQ+ ER+ ALT LVV TA VLKG ISP+QALFDAGFDS+TAEEFVGRL+E LS+ GW++GG AEA++SSTT+FDCPTAR +AEH+EG L TG
Sbjct: 2 IRDFAATFEGLGLSPAYCGTAYGLAEHVVGVCAHEANLGGRPLSELTDEDLECVGQLERLSDGSKLKIVDPKTRREVALGEVGELWLSSPSVAAGYWGQPELTEEAFNANVVGEEQ-GEGSDNPTGTVFLRTGDLARVEAGGSGRLFISGRIKDLIIVRGRNLYPQDVEFAVQEACSMVRPGCVAAFSTTELGGELEVVLEVRQSAEGDPDGLSEGLEAIRRAIASEGCYPSRVVAIKEKTIPKTTSGKIQRRRSREMLHQGALSVIAELTAPRGSSCIAEGSTKAAAAVSGGVXXXXXXTSSESGSEPSXLXXXXXSWVSASVPVPPRPASSCSLSSXXXXXXXXXXXXXXXXXXSQPPAGGPEDAATAGSSDPLGTNQEWREGLRQEQLRGPRGAGDDDAGAAAAGRESSDGDASLLSRQKGERLEALTMLVVGTATGVLKGRAISPDQALFDAGFDSITAEEFVGRLQERLSSEGWVSGGLPGAEAVVSSTTVFDCPTARHIAEHVEGALSKTG 517
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: A0A6H5JSY1_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY1_9PHAE) HSP 1 Score: 414 bits (1063), Expect = 7.530e-125 Identity = 241/537 (44.88%), Postives = 322/537 (59.96%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRNSTNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASK-HFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQYISRKAEKSFKLRGFPDGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGVCAREPNLAGL-SLSDISDEDLECVG-VLDDLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMAL--GELPSCFDREVFLRTGDLARIDRAGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEVVMEVRKSAEQGASILAEGMEAVRRAIIAE-GCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVL 1593
PP+P TL KSL KLQ +V+ C P ++L+ P +N+LRL K +++ + WP+LPY + G S R + +G F + FD+ ++ +DVAFLQFTSGSTS+PKGVM+T+ NL HN I + RG G FSWLP +HD+GLI TL PF++GW Y SP+ F+RRPL+WL LMSKE++ + APDF+ RLCVRKW ++PE+RA++ LDL + ++QN AEPVRAS++RDF FAA+GL + AYGLAEH VG + PN G SLSDISDE L+ G V + + +V +P T REV VGE GE+W+SS SVA GYWGK ELT+E FRAR PS D + FLRTGDL R+D G +++ GR+KDL+I+ GRN+YPQ +VMEVR +++ + E +E+V ++I+E G P R+VAI+E TIPKTTSGKIQRR+TR LH G+L V+
Sbjct: 113 PPNPATLKKSLQKLQLIVEGCTPNMILVCPLVNKLRLAWKLRAVATGKIGWPNLPYHCPDVKEETIPTSGLSYSAVEWKS-RGSKSAEAGTKRPSFQMQRPSFDDPTIKPEDVAFLQFTSGSTSDPKGVMLTYGNLTHNIDAIINSSNAQIVERGGVPGGNRTWFSWLPAFHDMGLIHGTLVPFLAGWTAAYCSPITFMRRPLMWLELMSKEKSQMTAAPDFAFRLCVRKW--KEMSPESRAALH--LDLRPIMFMQNAAEPVRASTVRDFAETFAAVGLPAYASNAAYGLAEHTVGCASFSPNPGGRESLSDISDERLQASGDVHASANSHINIRVIDPKTCREVPVGETGEMWISSESVAAGYWGKLELTQETFRARIKCDTTADGSPAPSWADLD-FLRTGDLCRVDTEGLLYVEGRLKDLVIVAGRNVYPQ-------------------------------IVMEVRAVSKKNTQAVMEAIESVCHSVISESGLTPSRVVAIKEGTIPKTTSGKIQRRKTRAMLHGGRLKVV 612
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: D7G7J4_ECTSI (Carrier domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J4_ECTSI) HSP 1 Score: 364 bits (935), Expect = 1.590e-113 Identity = 223/401 (55.61%), Postives = 270/401 (67.33%), Query Frame = 1
Query: 991 KCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELPSCFDREVFLRTGDLARIDR--AGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSELEVVMEVRKSAEQGASILAEGMEAVRRAIIAEGCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVLGLSTPTPTSTSTPPTVEQDLTPVENTLPVSSSTPRSPLNMKCLAARPGEIGACTASRKTSVEQDPEQAARKVVEKDAEKGMEAG--------SLLERQRAERMAALTGLVVDTAAEVLKGVTISPEQALFDAGFDSVTAEEFVGRLRECLSNHGWIAGGPREAEAILSSTTLFDCPTARQMAEHIEGVLISTGRAGTG 2163
K K+ +P TRREVA+GE+GELWLSSPSVA GYWG+PELTEEAF AR + GE VFLRTGDLAR++ +GR+FI GR+KDLII+RGRN+YPQDVEFA QEAS IVRPGC+AAFS +ELG ELEVV+EVRKSAE L+EG+EAVRRAI +EGCYP R+VAI+E+TIPKTTSGKIQRRR+R + G L T++ S P A +GA + + QD + R V + +A G AG SLL RQ+ ER+ ALT LVV TA +VL+G ISP+QALFDAGFDS+TAEEFVGRL+E LS+ GW++GG AEA++SSTT+FDCPTAR +AEH+EG L TG AG G
Sbjct: 153 KLKIVDPETRREVALGEVGELWLSSPSVAAGYWGQPELTEEAFNARVVGEEQ-GEGSDNPTGTVFLRTGDLARLETGGSGRLFISGRIKDLIIVRGRNLYPQDVEFAVQEASSIVRPGCVAAFSTTELGGELEVVLEVRKSAEGDPDGLSEGLEAVRRAIASEGCYPSRVVAIKEKTIPKTTSGKIQRRRSRGDVAPG----CTLGHHRAHRTASDAXXXXXXXXXXXXXXXXSQPPTGGSEGAATAGSTDSLGAYQEGGE-GLRQDQLRGPRGVGDDNA--GGAAGRESSDGDASLLSRQKDERLDALTKLVVSTATDVLRGRAISPDQALFDAGFDSITAEEFVGRLQERLSSGGWVSGGLPGAEAVVSSTTVFDCPTARHIAEHVEGALSKTG-AGDG 544
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: W7U9U8_9STRA (Polyketide synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9U8_9STRA) HSP 1 Score: 348 bits (892), Expect = 2.700e-100 Identity = 263/728 (36.13%), Postives = 373/728 (51.24%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRNSTNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASKHFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQ----YISRKAEKSFKLRGFPDGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGV--CAREPNLAGLSLSDISDEDLECVGVLDDLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELPSCFDREVFLRTGDLARIDRAGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKSELGSE---LEVVMEVR--KSAEQGASILAEGMEAVRRAIIAE-GCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDVLGLSTPTPTSTSTPPTVEQDLTPVENTLPVSSSTPRSPLNMKCLAARPGEIGACTASRKTSVEQDPEQAARKVVEKDAEKGMEAGSLLERQRAERMAALTGLVVDTAAEVLKGVTISPEQALFDAGFDSVTAEEFVGRLRECLSNHGWIAGGPREAEAILSSTTLFDCPTARQMAEHIEGVLISTG 2148
PP+P L SL KL+ +V + + L IN R S+ N+LSSA+ WP + +ST+ L G+G + DE L +D+AFLQ+TSGST +PKGVMITF NL HN + R+ + R + E G SWLPQYHD+GLI+ + PFV G+RM ++SP+ FV+ PL+W++ +S FS AP+F+L L R+W EALDL L++IQ G EPV A I F S FA GL + G AYGLAEH V V C + S+I+ L G ++ +P + E E GE+WLSSPS AVGYWG+ + T+E F+AR M+ + P F V++RTGD+ +D+ +FICGR+KDLII+RG+N YPQD+E ++AS+ VRPGC+AAFS S E +E+V E R K A +++ E ++ + RAI++E G YR+VAI++R+IPKTTSGKI+RR TR+ LH +L V+ T S ++ D T E L + L + + G T+S TS E EQ ++++ EK L ++++TA +V + + L D G +S+ A EF +L L L T +FD PT RQ+AE+I + +G
Sbjct: 80 PPNPTKLKMSLEKLELIVTSAGATLCLTDNTINWFRKASQLNVLSSAK--WP------KGLKWDSTDSI----------------LAGTGTSC---------DEPGLHPNDIAFLQYTSGSTGDPKGVMITFGNLDHNVNDLILFSLRRDIFCNRTRTLENIEVPVGVSWLPQYHDMGLIVGLIMPFVGGFRMYHMSPMTFVKNPLIWIKTISNVGAHFSTAPNFALGLTARRW--------KSQRKKEALDLGTLQFIQLGGEPVSAEHIASFSSTFAGYGLRRDWVGPAYGLAEHTVAVSYCTEL-----VMCSEIAGGTLVACGA----DFRVDVRIVDPESFAECQEREQGEIWLSSPSCAVGYWGREDATQETFKAR----MSTPDRPPIFGNGVYMRTGDMGFLDK-DHLFICGRIKDLIILRGKNYYPQDIEMVVEKASDHVRPGCLAAFSSSVADLEEEQVEIVFEWREVKGATSSKNMMHEELDKIFRAIVSECGIRVYRIVAIQDRSIPKTTSGKIRRRATRDALHQNELRVV-FELALGTHESDRDLLKLDCTGQE-ALSIIEDAVSPGLTLGGNSVPSQHDG--TSSHATSPE---EQLRAQLLQNIQEK------------------LLRVILETALDVTGLDHVEVDFPLMDLGLESILAIEFREKLSAKLGGFD------------LPDTIIFDYPTIRQIAEYIIKEIFGSG 715
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Match: A0A4D9CX67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX67_9STRA) HSP 1 Score: 345 bits (885), Expect = 9.390e-99 Identity = 261/733 (35.61%), Postives = 373/733 (50.89%), Query Frame = 1
Query: 1 PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLWPDLPYQTRAAPRNSTNGRGSXXXXXXXASSRWLRLVGSGENAIGFSASKHFDEESLGEDDVAFLQFTSGSTSEPKGVMITFANLLHNAQ----YISRKAEKSFKLRGFPDGERIRGFSWLPQYHDLGLIMCTLTPFVSGWRMGYLSPLDFVRRPLLWLRLMSKERTIFSCAPDFSLRLCVRKWWVNNLTPEARASMTEALDLSALEWIQNGAEPVRASSIRDFGSAFAAIGLSSSYPGVAYGLAEHVVGV--CAREPNLAGLSLSDISDEDLECVGVLDDLSENSKCKVFEPVTRREVAVGELGELWLSSPSVAVGYWGKPELTEEAFRARTSRKMALGELPSCFDREVFLRTGDLARIDRAGRIFICGRMKDLIIIRGRNIYPQDVEFAAQEASEIVRPGCIAAFSKS--ELGSE-LEVVMEVR--KSAEQGASILAEGMEAVRRAIIAE-GCYPYRLVAIRERTIPKTTSGKIQRRRTREFLHAGQLDV-----LGLSTPTPTSTSTPPTVEQDLTPVENTLPVSSSTPRSPLNMKCLAARPGEIGACTASRKTSVEQDPEQAARKVVEKDAEKGMEAGSLLERQRAERMAALTGLVVDTAAEVLKGVTISPEQALFDAGFDSVTAEEFVGRLRECLSNHGWIAGGPREAEAILSSTTLFDCPTARQMAEHIEGVLISTG 2148
PP+P L SL KL+ +V + + L IN R S+ N+LSSA+ WP L ++I S DE L +D+AFLQ+TSGST +PKGVMITF NL HN + R+ + R + E G SWLPQYHD+GLI+ + PFV G+RM ++SP+ FV+ PL+W++ +S FS AP+F+L L R+W EALDL L++IQ G EPV A I F S FA GL + G AYGLAEH V V C + S+I+ L G ++ +P + E E GE+WLSSPS AVGYWG+ + T+E F+AR M+ + P F V++RTGD+ +D+ +FICGR+KDLII+RG+N YPQD+E ++AS+ VRPGC+AAFS S +L E +E+V E R K A +++ E ++ + RAI++E G YR+VAI++R+IPKTTSGKI+RR TR+ LH +L V LG T ++ L+ +E+ + +P L + ++ I +S TS E EQ ++++ EK L ++++TA +V + + L D G +S+ A EF +L L L T +FD PT RQ+AE+I + +G
Sbjct: 124 PPNPTKLKMSLEKLELIVTSAGATLCLTDNTINWFRKASQLNVLSSAK--WPK-------------------------------GLKWDSTDSILASTGTSCDEPGLHPNDIAFLQYTSGSTGDPKGVMITFGNLDHNVNDLILFSLRRDIFCNRTRTLENIEVPVGVSWLPQYHDMGLIVGLIMPFVGGFRMYHMSPMTFVKNPLIWIKTISNVGAHFSTAPNFALGLTARRW--------KSQRKKEALDLGTLQFIQLGGEPVSAEHIASFSSTFAGYGLRRDWVGPAYGLAEHTVAVSYCTEL-----VMCSEIAGGTLVACGA----DFRVDVRIVDPESFAECQEREQGEIWLSSPSCAVGYWGREDATQETFKAR----MSTPDRPPIFGNGVYMRTGDMGFLDK-DHLFICGRIKDLIILRGKNYYPQDIEMVVEKASDHVRPGCLAAFSSSIADLEEEQVEIVFEWREVKGATSSKNMMHEELDKIFRAIVSECGIRVYRIVAIQDRSIPKTTSGKIRRRATRDALHQNELRVVFELALGTHEGDRDLLKLACTGQEALSIIEDAV-----SPGLTLGGNSIPSQHDGI----SSHATSPE---EQLRAQLLQNIQEK------------------LLRVILETALDVTGLDHVEVDFPLMDLGLESILAIEFREKLSAKLGGFD------------LPDTIIFDYPTIRQIAEYIIKEIFGSG 759 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15882.3808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15882.3808.1 >prot_H-elongata_contig15882.3808.1 ID=prot_H-elongata_contig15882.3808.1|Name=mRNA_H-elongata_contig15882.3808.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=721bp PPSPLTLSKSLAKLQSVVDACNPRIVLLSPDINRLRLVSKFNLLSSARRLback to top mRNA from alignment at H-elongata_contig15882:227..6419- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15882.3808.1 ID=mRNA_H-elongata_contig15882.3808.1|Name=mRNA_H-elongata_contig15882.3808.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6193bp|location=Sequence derived from alignment at H-elongata_contig15882:227..6419- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15882:227..6419- >mRNA_H-elongata_contig15882.3808.1 ID=mRNA_H-elongata_contig15882.3808.1|Name=mRNA_H-elongata_contig15882.3808.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4326bp|location=Sequence derived from alignment at H-elongata_contig15882:227..6419- (Himanthalia elongata Himel1 dioecious)back to top |