mRNA_H-elongata_contig1572.3724.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 237 bits (605), Expect = 1.020e-66 Identity = 128/338 (37.87%), Postives = 196/338 (57.99%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVE-RPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKKVDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSIVPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E G G G + V+ P+G+ + ++ F +K+G+I+ ++ RLVA+GF Q+ ++ Y SSSP P+ ASI+++L + G + DV AY A ++EE++ +LP D K+ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV +IV+YVDD+LVA + + D E+ + L FP K LG+ ++ GC I RD AGTL+ +Q YI ++ ERF V TS +P+ G K + E+ + P RE +G +MW +T +RPD+SFAV +A+ P HW A QK L YL T +LGITY
Sbjct: 755 AMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1084
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 237 bits (605), Expect = 1.310e-66 Identity = 128/338 (37.87%), Postives = 196/338 (57.99%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVE-RPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKKVDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSIVPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E G G G + V+ P+G+ + ++ F +K+G+I+ ++ RLVA+GF Q+ ++ Y SSSP P+ ASI+++L + G + DV AY A ++EE++ +LP D K+ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV +IV+YVDD+LVA + + D E+ + L FP K LG+ ++ GC I RD AGTL+ +Q YI ++ ERF V TS +P+ G K + E+ + P RE +G +MW +T +RPD+SFAV +A+ P HW A QK L YL T +LGITY
Sbjct: 1134 AMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1463
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 237 bits (605), Expect = 1.320e-66 Identity = 128/338 (37.87%), Postives = 196/338 (57.99%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVE-RPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKKVDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSIVPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E G G G + V+ P+G+ + ++ F +K+G+I+ ++ RLVA+GF Q+ ++ Y SSSP P+ ASI+++L + G + DV AY A ++EE++ +LP D K+ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV +IV+YVDD+LVA + + D E+ + L FP K LG+ ++ GC I RD AGTL+ +Q YI ++ ERF V TS +P+ G K + E+ + P RE +G +MW +T +RPD+SFAV +A+ P HW A QK L YL T +LGITY
Sbjct: 1154 AMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1483
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 237 bits (605), Expect = 1.330e-66 Identity = 128/338 (37.87%), Postives = 196/338 (57.99%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVE-RPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKKVDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSIVPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E G G G + V+ P+G+ + ++ F +K+G+I+ ++ RLVA+GF Q+ ++ Y SSSP P+ ASI+++L + G + DV AY A ++EE++ +LP D K+ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV +IV+YVDD+LVA + + D E+ + L FP K LG+ ++ GC I RD AGTL+ +Q YI ++ ERF V TS +P+ G K + E+ + P RE +G +MW +T +RPD+SFAV +A+ P HW A QK L YL T +LGITY
Sbjct: 1297 AMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 1626
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH) HSP 1 Score: 227 bits (579), Expect = 1.880e-66 Identity = 128/341 (37.54%), Postives = 196/341 (57.48%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVERPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKK--VDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTS--IVPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E+ VW++VE P+G + + +FK D +G IE+Y+ RLVA+GF Q + I Y+E+ SP + S+R+++ ++A E+ Q+DV A+L N+EEE++ PE + K+ V LKK++YGL A W F + + GF+ + D C++ ++ G +++YVDD+L+AS+ + L F +K +G+ASY +G I RDR+ G L +Q YI+ V ERFG+ K S I P G K S PQ + E + M +IPY VG L++A T TRPDISFAV L +++ NPG HW+A +K ++YL T +TY
Sbjct: 35 AMNDELKSMDQNKVWELVELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSPSIAPIQKGDK-FSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQGTKEYMLTY 373
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI) HSP 1 Score: 225 bits (574), Expect = 8.950e-66 Identity = 126/342 (36.84%), Postives = 196/342 (57.31%), Query Frame = 1
Query: 1 RAIAREINGQTGRGVWQVVERPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAY--CDSRKKVDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSI--VPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
+A+ E+ GVW +VE PKG + + +FK D G I +Y+ RLVA+GF Q + I Y+E+ SP ++ S R+++ ++A E+ Q+DV A+L N++E IY PE + DS++ V LK+++YGL A W + F + + GF+ + D C++ + G ++V+YVDD+L+AS+ + +R L S F +K LG AS+ LG I RDR+ G L +Q YI V RFG++ + P A G K S P+ + E +DM + PY VG LM+A TRPDI++ V L ++ NPG HW+ A++ ++YL RT + +TY
Sbjct: 24 KAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKGDK-FSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTY 363
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 230 bits (586), Expect = 1.590e-65 Identity = 125/338 (36.98%), Postives = 194/338 (57.40%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVE-RPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKKVDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSIVPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E G G G + V+ P+G+ + ++ F +K+G+I+ ++ RLVA+GF Q+ ++ Y SSSP P+ ASI+++L + G + DV AY A ++EE++ +LP D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV +IV+YVDD+LVA + + D E+ + L FP K L + ++ GC I RD GTL+ +Q YI ++ +RF V TS +P++ G K D E + P RE +G +MW +T +RPD+SFAV +A+ P HW A QK L YL T +LGITY
Sbjct: 309 AMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDD-------EKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY 638
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A2P6SMQ0_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SMQ0_ROSCH) HSP 1 Score: 228 bits (581), Expect = 8.470e-65 Identity = 127/341 (37.24%), Postives = 201/341 (58.94%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVERPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKK--VDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSI--VPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E++ GVW++V+ + + + +FK D G IE+++ RLVA+GF Q + I++ E+ SP + S R+++ ++A E+ Q+DV A+L +EEEI+ PE + ++ K+ V LKK++YGL A W K F + + GF + D CV+ +++ + +I+ YVDD+L+AS+ + + L S F +K+LG+ASY LG I RDR G L +Q YI + +RFG+ + VP + G K L+K+ P+T+ E +M IPY +VG LM+A TRPD+SFAV L++F+ NPG HW A +K L+YL RT + + Y
Sbjct: 266 AMIAELDSMYKNGVWELVKPKENHKPIGCKWVFKTKRDVSGNIERHKARLVAKGFTQKEGIYFTETFSPVSTKDSFRIIMALVAHYDMELHQMDVKTAFLNGELEEEIFMVQPEGFIEAGKENMVCRLKKSIYGLKQASRQWYKKFDSVVSSFGFTENLVDECVYLKVVGNNFIFLIL-YVDDILLASSNVKLLKDTKAFLSSNFDMKELGEASYVLGIEIKRDRKQGLLGLSQQNYISKILKRFGMETCANGEVPMSKGDK-LTKNQCPKTENEKTEMESIPYARLVGSLMYAQVCTRPDLSFAVGMLSRFQSNPGHEHWTAGKKVLRYLQRTKDYMLVY 604
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY) HSP 1 Score: 228 bits (581), Expect = 1.170e-64 Identity = 130/341 (38.12%), Postives = 197/341 (57.77%), Query Frame = 1
Query: 4 AIAREINGQTGRGVWQVVERPKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKK--VDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTSI--VPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
A+ E+ VW +V+ P G + + +FK D G+IE+Y+ RLVA+GF Q + + Y+E+ SP ++ S R+V+ ++A E+ Q+DV A+L ++ E++Y P+ + S K+ V LKK++YGL A W F + + GF+ + D C++ +I G + +V+YVDD+L+AS + R L F +K LG+AS+ LG I RDR+ G L +Q YI V ERF ++ + P G K LSK PQ D E +M++IPY VG LM+A TRPDI+FA+ L +F+ +PG HWRAA+K L+YL RT + +TY
Sbjct: 296 AMVDELKSMDNNNVWDLVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYLKI-SGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDK-LSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTY 634
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Match: A0A4V1T029_9SPHI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4V1T029_9SPHI) HSP 1 Score: 218 bits (556), Expect = 1.250e-64 Identity = 126/321 (39.25%), Postives = 190/321 (59.19%), Query Frame = 1
Query: 64 PKGKTVLDTRVLFKRTIDKDGRIEKYECRLVAQGFRQVKDIHYEESSSPTPAQASIRMVLIMIAALG*EVQQLDVDMAYLEANVEEEIYAELPEAYCDSRKK--VDLLKKAMYGLVHAGLLW*KPFGIELETKGFQRSQADPCVFRRILHGIVVAVIVVYVDDLLVASATKRDEEQAVRGLCSCFPIKKLGKASYYLGCHITRDRNAGTLKFNQHQYIQNVAERFGVTKTS--IVPSAAGGKALSKSDSPQTDAEVEDMRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALQYLWRTGNLGITY 1014
P+G + + +FK +D +G IE+++ RLVA+GF Q + Y+E+ SP + S+R+V+ M+A E+ Q+DV A+L N++EE++ + PE + K+ V LKK++YGL A W F + + GF+ + D C++ +I G ++V+YVDD+L+A+ Q L F +K +G+ASY +G I+RDR+ G L +Q YI V ERF + K S IVP G K S + P+ + E + M QIPY IVG LM+A T TRP ISFAV L +++ NPG HW+AA+K L+YL T + +TY
Sbjct: 2 PEGCKRVGCKWVFKTKLDSNGNIERHKARLVAKGFTQKDGVDYKETFSPVSKKDSLRIVMAMVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFVVDGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVTSFGFKENIVDRCIYLKI-SGSKFIILVLYVDDILLATNDLGLLRQTKEFLSKNFEMKDMGEASYVIGIEISRDRSQGWLGLSQKAYINKVLERFKMDKCSAGIVPIQKGDK-FSLNQCPKNELERKQMEQIPYASIVGSLMYAQTCTRPGISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDRMLTY 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1572.3724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1572.3724.1 >prot_H-elongata_contig1572.3724.1 ID=prot_H-elongata_contig1572.3724.1|Name=mRNA_H-elongata_contig1572.3724.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp MRQIPYREIVGVLMWAATMTRPDISFAVHQLAKFKDNPGPTHWRAAQKALback to top mRNA from alignment at H-elongata_contig1572:1..1023- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1572.3724.1 ID=mRNA_H-elongata_contig1572.3724.1|Name=mRNA_H-elongata_contig1572.3724.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1023bp|location=Sequence derived from alignment at H-elongata_contig1572:1..1023- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1572:1..1023- >mRNA_H-elongata_contig1572.3724.1 ID=mRNA_H-elongata_contig1572.3724.1|Name=mRNA_H-elongata_contig1572.3724.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=396bp|location=Sequence derived from alignment at H-elongata_contig1572:1..1023- (Himanthalia elongata Himel1 dioecious)back to top |