mRNA_H-elongata_contig157191.3722.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig157191.3722.1
Unique NamemRNA_H-elongata_contig157191.3722.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A8F0FB28_9PHAE (Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB28_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 1.960e-193
Identity = 280/292 (95.89%), Postives = 286/292 (97.95%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVL 876
            MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGR+ACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS EI+ KNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSS GGQIIDIQTL+KGET+VT+INSSG EV QTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDP+RIIGFI FAFSVL
Sbjct:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRLACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIQQKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYGGQIIDIQTLDKGETSVTIINSSGKEVNQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPTRIIGFIFFAFSVL 292          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A516ICS4_9PHAE (Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepID=A0A516ICS4_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 5.000e-180
Identity = 257/293 (87.71%), Postives = 279/293 (95.22%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            M+ L+R+MKFIMIS +FI SSL LSVK+S+AYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPYAKDAKQ+L NGQLSGLNVGAVVILPEGFKLAP NLIS EI+ K+KGVYISPYSSTQDNILVVGPIAGD +QEI FPILSPDPATNKK+NFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSS GQI +I+TLEKGET++T+I S+GTE+KQTIPKGLSLVVS+KD IKLDQPLTKDPNVGGFGQTDVEIVLQDPSR+IGFI+FAFSVLF
Sbjct:    1 MELLKRLMKFIMISFIFIISSLALSVKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQVLSNGQLSGLNVGAVVILPEGFKLAPKNLISKEIQEKSKGVYISPYSSTQDNILVVGPIAGDKNQEIIFPILSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSEGQIAEIKTLEKGETSITIIGSTGTEIKQTIPKGLSLVVSQKDTIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRVIGFIIFAFSVLF 293          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A6B7F215_9PHAE (Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7F215_9PHAE)

HSP 1 Score: 507 bits (1305), Expect = 7.100e-180
Identity = 253/293 (86.35%), Postives = 277/293 (94.54%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            M+ LRR+MKF +IS +FI SS+  S+K+S+AYPIYAQQAYTNPRAANGRIACANCHLAEKPVQ+ESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS EIK K+KGV+ISPYS TQDNILVVGPIAGDTHQEI FP+LSPDPATNKK+NFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSS  GQ+IDI+TL+KGETA+TL++S G E KQ IPKGLSL++SKKDNIK+DQPLTKDPNVGGFGQTDVEIVLQDP+R+IGFIVFAFSVLF
Sbjct:    1 MELLRRLMKFFIISFIFIISSIPFSIKMSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQVESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISTEIKEKSKGVFISPYSPTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSFEGQVIDIETLDKGETAITLLDSKGKETKQNIPKGLSLIISKKDNIKVDQPLTKDPNVGGFGQTDVEIVLQDPNRVIGFIVFAFSVLF 293          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A8F0F9U7_9PHAE (Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9U7_9PHAE)

HSP 1 Score: 503 bits (1296), Expect = 1.670e-178
Identity = 255/293 (87.03%), Postives = 273/293 (93.17%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            M+ LRR++K + IS + I SS TL +++SQAYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPKA+LPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS EIK KNKGVYISPYSSTQDNILVVGPIAGDTHQEI FP+LSPDPATNKK+NFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSS  GQI ++Q LEKGETA+T+ NS G E+KQTIPKGLSLVVSKKDNIKLDQPLT+DPNVGGFGQTDVEIVLQDP+RIIGFI FAFSVLF
Sbjct:    1 MQLLRRLVKILSISFILIISSFTLCIQMSQAYPIYAQQAYANPRAANGRIACANCHLAEKPVQIESPKAILPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIKEKNKGVYISPYSSTQDNILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSLEGQITELQVLEKGETALTITNSQGKEIKQTIPKGLSLVVSKKDNIKLDQPLTRDPNVGGFGQTDVEIVLQDPARIIGFIAFAFSVLF 293          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: D1J7B1_ECTSI (Cytochrome f n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J7B1_ECTSI)

HSP 1 Score: 501 bits (1291), Expect = 9.630e-178
Identity = 250/293 (85.32%), Postives = 275/293 (93.86%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            M+ L+R+MKF +IS +F+ SS+  S+++S+AYPIYAQQ YTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPY+KDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLIS EIK K+KGV+ISPYS+TQ+NILVVGPIAGDTHQEI FP+LSPDPATNKK+NFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSS  GQ+IDIQTL KGET VT++NS G E KQ IPKGLS+VVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSR++GFI+FAFSVLF
Sbjct:    1 MELLKRLMKFFIISFIFVISSIPFSMEMSEAYPIYAQQGYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYSKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISKEIKEKSKGVFISPYSATQENILVVGPIAGDTHQEIIFPVLSPDPATNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSFEGQVIDIQTLAKGETEVTMVNSKGNETKQNIPKGLSVVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRVVGFIIFAFSVLF 293          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A8F0F7A9_9PHAE (Cytochrome f n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A9_9PHAE)

HSP 1 Score: 501 bits (1291), Expect = 9.630e-178
Identity = 250/293 (85.32%), Postives = 275/293 (93.86%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            MKTL+++++FI+IS  FI +S T SV ISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQI+SPKA+LPNKVFEAAVKIPY+KDAKQILGNGQLS LNVGAVVILPEGFKLAPNNLIS EI+ KNKGVYISPYSSTQDNILVVGPIAGD H EI FPILSPDP TNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNN+VTS++ GQI +IQTLEKGET +++INS G EVKQTIPKGLS+V+SKKDNIK+DQPLTKDPNVGGFGQTD+EIVLQDP+RIIGFI+FAFS+LF
Sbjct:    1 MKTLKKVLQFILISFTFIVNSFTFSVAISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIDSPKAILPNKVFEAAVKIPYSKDAKQILGNGQLSSLNVGAVVILPEGFKLAPNNLISKEIQEKNKGVYISPYSSTQDNILVVGPIAGDQHPEIIFPILSPDPLTNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNVVTSNTDGQITEIQTLEKGETLISIINSQGKEVKQTIPKGLSIVISKKDNIKIDQPLTKDPNVGGFGQTDIEIVLQDPNRIIGFIIFAFSILF 293          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: D1GJK5_FUCVE (Cytochrome f n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJK5_FUCVE)

HSP 1 Score: 490 bits (1262), Expect = 2.510e-173
Identity = 246/293 (83.96%), Postives = 270/293 (92.15%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            MK  +RIMK  MIS +FI S LTLS++ISQAYPIYAQQ+YTNPRAANGR+ACANCHLAEKP+QIESPKAVLPNKVFE AVKIPY +DAKQILGNGQLSGLNVGAVVILPEGFKLAPN LIS EI+ KNKG+YISPYSS QDNILVVGP++GD H+EI FPIL+PDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNI+TSS  GQI +IQ LEKGET +T+INS+G E+KQ IPKGLSL+VS+KDNIKLDQPLTKDPNVGGFGQTD EIVLQDP+RIIGFI+FAFSVLF
Sbjct:    1 MKICKRIMKMFMISFMFIFSFLTLSIEISQAYPIYAQQSYTNPRAANGRLACANCHLAEKPIQIESPKAVLPNKVFEVAVKIPYPQDAKQILGNGQLSGLNVGAVVILPEGFKLAPNKLISKEIQEKNKGIYISPYSSNQDNILVVGPVSGDLHKEITFPILAPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIITSSFEGQIREIQYLEKGETLITVINSNGQEIKQNIPKGLSLIVSQKDNIKLDQPLTKDPNVGGFGQTDTEIVLQDPNRIIGFIIFAFSVLF 293          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A6B9TMM8_SARFS (Cytochrome f n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TMM8_SARFS)

HSP 1 Score: 486 bits (1251), Expect = 1.190e-171
Identity = 243/293 (82.94%), Postives = 270/293 (92.15%), Query Frame = 1
Query:    1 MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            MK L++IMK ++IS + I  S T S K SQAYPIYAQQAY NPRAANGR+ACANCHLAEKP+QIESPKA+LPNKVFEAAVKIPY ++AKQILGNGQLSGLNVGAVVILPEGFKLAP+NLIS EI+ KNKGVYISPYSS QDNILVVGPI+GD H+EINFPILSPDP+TNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTS   G+I +IQ L+KG+T +T+INS+G E+KQTIPKGLSL+VSKKDNIKLDQPLTKDPNVGGFGQTD+EIVLQDP+R+IGFIVFAFSVLF
Sbjct:    1 MKILKKIMKILLISFMLIHISFTFSCKDSQAYPIYAQQAYANPRAANGRLACANCHLAEKPIQIESPKAILPNKVFEAAVKIPYPREAKQILGNGQLSGLNVGAVVILPEGFKLAPSNLISKEIQEKNKGVYISPYSSNQDNILVVGPISGDLHKEINFPILSPDPSTNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSFFEGEITEIQALDKGDTLITIINSNGQELKQTIPKGLSLIVSKKDNIKLDQPLTKDPNVGGFGQTDIEIVLQDPNRVIGFIVFAFSVLF 293          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A2I4Q308_9PHAE (Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q308_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 2.780e-161
Identity = 226/288 (78.47%), Postives = 258/288 (89.58%), Query Frame = 1
Query:   16 RIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF 879
            RI+K+ +++ + + SSLT+S+  S+AYPIYAQQAYTNPRAANGRIACANCHLAEKP++IE+PKA+LPN VFE A+KIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAP NL++ E + KNKGVYISPYSSTQDNILVVGPI G+TH EI FPILSPDP TNKKVNFLKYPIYVG NRGRGQIYPTGEKSNNN+VT+S+ GQ+ +I+T   GET +++ NS G E KQ+IPKGLSLVVSKKDNIK+DQPLTKDPNVGGFGQ D EIVLQDP+RIIGF +FAFSVLF
Sbjct:    7 RILKYFLLNSILVISSLTVSITNSEAYPIYAQQAYTNPRAANGRIACANCHLAEKPIEIEAPKAILPNSVFETAIKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPKNLLTKEFQEKNKGVYISPYSSTQDNILVVGPIQGETHSEIVFPILSPDPETNKKVNFLKYPIYVGGNRGRGQIYPTGEKSNNNMVTASTEGQVFEIETASNGETLISIRNSDGKETKQSIPKGLSLVVSKKDNIKVDQPLTKDPNVGGFGQMDTEIVLQDPARIIGFSLFAFSVLF 294          
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Match: A0A8E5XRH3_9PHAE (Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH3_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 8.440e-159
Identity = 224/291 (76.98%), Postives = 257/291 (88.32%), Query Frame = 1
Query:    4 KTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRIACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGLNVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIAGDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDNIKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVL 876
            K L   +K I++S  F+S S       SQAYPIYAQQAY NPRAANGRIACANCHLAEKPVQIESPK++LPNKVF+A VKIPYAKDAKQILGNGQLS LNVGAVVILPEGFKLAP+NLIS EI+ KNKG+YISPYSS+Q+NILVVGP++GD HQEI FP+LSPDP TNKK+NFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSS  GQ+ +IQTLEKGE  +TL++S G E+KQT+PKGLSL++SK D I +DQP+TKDPNVGGFGQTD EIVLQ+P+R++GFI+FAFS+L
Sbjct:    6 KKLETTLKIIILSCSFMSLSFGFFNYTSQAYPIYAQQAYNNPRAANGRIACANCHLAEKPVQIESPKSILPNKVFDAIVKIPYAKDAKQILGNGQLSSLNVGAVVILPEGFKLAPSNLISREIQEKNKGIYISPYSSSQENILVVGPVSGDKHQEIIFPVLSPDPTTNKKINFLKYPIYVGANRGRGQIYPTGEKSNNNIVTSSYNGQVKEIQTLEKGEIIITLLDSEGKEIKQTVPKGLSLIISKNDLITVDQPITKDPNVGGFGQTDTEIVLQNPNRVLGFIIFAFSIL 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157191.3722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FB28_9PHAE1.960e-19395.89Cytochrome f n=1 Tax=Desmarestia aculeata TaxID=62... [more]
A0A516ICS4_9PHAE5.000e-18087.71Cytochrome f n=32 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A6B7F215_9PHAE7.100e-18086.35Cytochrome f n=1 Tax=Cladosiphon okamuranus TaxID=... [more]
A0A8F0F9U7_9PHAE1.670e-17887.03Cytochrome f n=1 Tax=Chorda asiatica TaxID=1281577... [more]
D1J7B1_ECTSI9.630e-17885.32Cytochrome f n=3 Tax=Ectocarpales TaxID=2877 RepID... [more]
A0A8F0F7A9_9PHAE9.630e-17885.32Cytochrome f n=1 Tax=Protohalopteris sp. TaxID=284... [more]
D1GJK5_FUCVE2.510e-17383.96Cytochrome f n=3 Tax=Fucaceae TaxID=3010 RepID=D1G... [more]
A0A6B9TMM8_SARFS1.190e-17182.94Cytochrome f n=14 Tax=Sargassaceae TaxID=3014 RepI... [more]
A0A2I4Q308_9PHAE2.780e-16178.47Cytochrome f n=1 Tax=Dictyopteris divaricata TaxID... [more]
A0A8E5XRH3_9PHAE8.440e-15976.98Cytochrome f n=1 Tax=Ishige okamurae TaxID=233772 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157191contigH-elongata_contig157191:1..879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score503.4
Seed ortholog evalue6.9e-140
Seed eggNOG ortholog2880.D1J7B1
Preferred namepetA
KEGG koko:K02634
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00162
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.photosynthesis
EggNOG OGs2CMAK@1,2QPT8@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194
Hectar predicted targeting categorysignal peptide
Exons1
Model size879
Cds size879
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929928.20012-CDS-H-elongata_contig157191:0..8791622929928.20012-CDS-H-elongata_contig157191:0..879Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig157191 1..879 -
1691679211.4258423-CDS-H-elongata_contig157191:0..8791691679211.4258423-CDS-H-elongata_contig157191:0..879Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig157191 1..879 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157191.3722.1prot_H-elongata_contig157191.3722.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig157191 1..879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig157191.3722.1

>prot_H-elongata_contig157191.3722.1 ID=prot_H-elongata_contig157191.3722.1|Name=mRNA_H-elongata_contig157191.3722.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=293bp
MKTLRRIMKFIMISLVFISSSLTLSVKISQAYPIYAQQAYTNPRAANGRI
ACANCHLAEKPVQIESPKAVLPNKVFEAAVKIPYAKDAKQILGNGQLSGL
NVGAVVILPEGFKLAPNNLISNEIKAKNKGVYISPYSSTQDNILVVGPIA
GDTHQEINFPILSPDPATNKKVNFLKYPIYVGANRGRGQIYPTGEKSNNN
IVTSSSGGQIIDIQTLEKGETAVTLINSSGTEVKQTIPKGLSLVVSKKDN
IKLDQPLTKDPNVGGFGQTDVEIVLQDPSRIIGFIVFAFSVLF
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mRNA from alignment at H-elongata_contig157191:1..879-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig157191.3722.1 ID=mRNA_H-elongata_contig157191.3722.1|Name=mRNA_H-elongata_contig157191.3722.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=879bp|location=Sequence derived from alignment at H-elongata_contig157191:1..879- (Himanthalia elongata Himel1 dioecious)
ATGAAAACTTTGAGAAGAATAATGAAATTTATCATGATAAGTTTGGTTTT TATCAGTAGTAGTCTTACACTTTCTGTTAAAATATCTCAAGCTTATCCTA TTTATGCGCAACAAGCGTATACAAATCCTCGTGCAGCAAATGGAAGAATT GCCTGTGCAAATTGCCATTTAGCAGAAAAACCTGTACAAATTGAATCTCC GAAAGCCGTATTACCAAATAAAGTATTTGAAGCAGCTGTAAAAATCCCTT ATGCTAAAGATGCTAAACAAATATTAGGTAATGGGCAACTTAGTGGATTA AATGTTGGTGCAGTTGTAATTTTACCCGAGGGATTTAAATTAGCTCCAAA TAATTTAATTTCAAACGAAATAAAAGCAAAAAATAAAGGAGTATATATTT CTCCTTATAGTTCAACACAAGATAATATATTAGTTGTTGGTCCAATTGCC GGTGATACACATCAAGAGATTAATTTCCCTATATTATCTCCAGATCCAGC AACTAATAAAAAAGTGAACTTTTTAAAATATCCAATTTATGTTGGTGCAA ATAGAGGTCGTGGACAAATTTACCCTACAGGTGAAAAAAGTAACAATAAT ATTGTTACTTCTTCTTCTGGAGGACAAATTATTGACATTCAAACACTGGA AAAAGGAGAAACAGCAGTGACTCTGATAAATTCCTCTGGTACTGAAGTGA AACAAACTATTCCAAAAGGATTATCATTAGTTGTTTCAAAAAAAGACAAT ATCAAATTAGATCAACCTTTAACAAAAGACCCTAATGTTGGTGGATTTGG TCAAACGGATGTAGAAATTGTTCTACAGGATCCTAGTAGAATTATTGGTT TTATAGTATTTGCTTTTTCTGTTTTATTT
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Coding sequence (CDS) from alignment at H-elongata_contig157191:1..879-

>mRNA_H-elongata_contig157191.3722.1 ID=mRNA_H-elongata_contig157191.3722.1|Name=mRNA_H-elongata_contig157191.3722.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1758bp|location=Sequence derived from alignment at H-elongata_contig157191:1..879- (Himanthalia elongata Himel1 dioecious)
ATGAAAACTTTGAGAAGAATAATGAAATTTATCATGATAAGTTTGGTTTT
TATCAGTAGTAGTCTTACACTTTCTGTTAAAATATCTCAAGCTTATCCTA
TTTATGCGCAACAAGCGTATACAAATCCTCGTGCAGCAAATGGAAGAATT
GCCTGTGCAAATTGCCATTTAGCAGAAAAACCTGTACAAATTGAATCTCC
GAAAGCCGTATTACCAAATAAAGTATTTGAAGCAGCTGTAAAAATCCCTT
ATGCTAAAGATGCTAAACAAATATTAGGTAATGGGCAACTTAGTGGATTA
AATGTTGGTGCAGTTGTAATTTTACCCGAGGGATTTAAATTAGCTCCAAA
TAATTTAATTTCAAACGAAATAAAAGCAAAAAATAAAGGAGTATATATTT
CTCCTTATAGTTCAACACAAGATAATATATTAGTTGTTGGTCCAATTGCC
GGTGATACACATCAAGAGATTAATTTCCCTATATTATCTCCAGATCCAGC
AACTAATAAAAAAGTGAACTTTTTAAAATATCCAATTTATGTTGGTGCAA
ATAGAGGTCGTGGACAAATTTACCCTACAGGTGAAAAAAGTAACAATAAT
ATTGTTACTTCTTCTTCTGGAGGACAAATTATTGACATTCAAACACTGGA
AAAAGGAGAAACAGCAGTGACTCTGATAAATTCCTCTGGTACTGAAGTGA
AACAAACTATTCCAAAAGGATTATCATTAGTTGTTTCAAAAAAAGACAAT
ATCAAATTAGATCAACCTTTAACAAAAGACCCTAATGTTGGTGGATTTGG
TCAAACGGATGTAGAAATTGTTCTACAGGATCCTAGTAGAATTATTGGTT
TTATAGTATTTGCTTTTTCTGTTTTATTTATGAAAACTTTGAGAAGAATA
ATGAAATTTATCATGATAAGTTTGGTTTTTATCAGTAGTAGTCTTACACT
TTCTGTTAAAATATCTCAAGCTTATCCTATTTATGCGCAACAAGCGTATA
CAAATCCTCGTGCAGCAAATGGAAGAATTGCCTGTGCAAATTGCCATTTA
GCAGAAAAACCTGTACAAATTGAATCTCCGAAAGCCGTATTACCAAATAA
AGTATTTGAAGCAGCTGTAAAAATCCCTTATGCTAAAGATGCTAAACAAA
TATTAGGTAATGGGCAACTTAGTGGATTAAATGTTGGTGCAGTTGTAATT
TTACCCGAGGGATTTAAATTAGCTCCAAATAATTTAATTTCAAACGAAAT
AAAAGCAAAAAATAAAGGAGTATATATTTCTCCTTATAGTTCAACACAAG
ATAATATATTAGTTGTTGGTCCAATTGCCGGTGATACACATCAAGAGATT
AATTTCCCTATATTATCTCCAGATCCAGCAACTAATAAAAAAGTGAACTT
TTTAAAATATCCAATTTATGTTGGTGCAAATAGAGGTCGTGGACAAATTT
ACCCTACAGGTGAAAAAAGTAACAATAATATTGTTACTTCTTCTTCTGGA
GGACAAATTATTGACATTCAAACACTGGAAAAAGGAGAAACAGCAGTGAC
TCTGATAAATTCCTCTGGTACTGAAGTGAAACAAACTATTCCAAAAGGAT
TATCATTAGTTGTTTCAAAAAAAGACAATATCAAATTAGATCAACCTTTA
ACAAAAGACCCTAATGTTGGTGGATTTGGTCAAACGGATGTAGAAATTGT
TCTACAGGATCCTAGTAGAATTATTGGTTTTATAGTATTTGCTTTTTCTG
TTTTATTT
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