mRNA_H-elongata_contig15703.3717.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: D7FQ79_ECTSI (Possible haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ79_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 3.560e-146 Identity = 205/277 (74.01%), Postives = 235/277 (84.84%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNGEDKDGFLEAMSLDYSSVREEAAFLLCHGPDTIVDDVGTTCTGTRDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMGLAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDVKTGRPPFELPNETLEKLFARESATPTWTMPLFAL 831
DG ALPGAVECLEELR +GKR+VILSNTSKRE FTM RLPKFGFR +LFDGGVTSGEEGYQ+L +NGLVGGKAVLLGWNGED DG L A+SLDYSS +E A FLLCHGPD IVDD G T T TR++G V+PY ++FQ A++RDLPMYNVNPD +VNNP+GG W+MPGL++K YE MGGRV YFGKPHKEH++TAV+KMGL D VVHVGDSLAHDI GA++AGLDSVFIAGGI GEELG+D K + F L + LE+ F+RE+ TPTWTMPLFAL
Sbjct: 38 DGRDALPGAVECLEELRSQGKRLVILSNTSKREDFTMARLPKFGFRRELFDGGVTSGEEGYQHLVQNGLVGGKAVLLGWNGEDSDGLLAALSLDYSSPKE-ATFLLCHGPDNIVDDTGATRTDTRNTGKVEPYEAVFQAAIERDLPMYNVNPDITVNNPQGGLWHMPGLLAKRYEAMGGRVTYFGKPHKEHYDTAVEKMGLGNDRVVHVGDSLAHDIVGASSAGLDSVFIAGGICGEELGIDAKADKSTFNLSPDALERAFSRENVTPTWTMPLFAL 313
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: A0A7S2V2E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2E7_9STRA) HSP 1 Score: 198 bits (504), Expect = 5.620e-57 Identity = 106/265 (40.00%), Postives = 154/265 (58.11%), Query Frame = 1
Query: 67 VVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNG--EDKDGFLEAMSLDYSSVREEAAFLLCHGPDTIVDDVGTTCTGTRDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMG---------LAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGV-DVKTGRPPFELPNETLEKLFARESATPTWTMPLF 825
++ILSN+SKR FT++RL KFGF S F G VTSGEE QY+ +NGLVG KA++ W + F + + +++S E A ++LCHG I +G T T + G V Y L + A ++ L M NPDF+V P G YMPGL+++ Y+++GG + FGKP HF ++ +G + D ++HVGDSL HDI GAA AG+DS+FI GGI +L + D E+ +L L ++ ++ P+W+ LF
Sbjct: 1 MIILSNSSKRSNFTIDRLGKFGFDSSAFSGAVTSGEEALQYIQRNGLVGQKALVFSWEDFRQADAPFFDQVQPEFASPAEGARYILCHGSQVISTALGDTSTRLQQEGIVDDYEDLLKDAAEKGLLMVVANPDFTVKKPDGSTAYMPGLLARRYQELGGPLVTFGKPGVSHFQACIRMLGQQQDGEGQPILPDRIIHVGDSLHHDIQGAADAGIDSLFIGGGIHSADLQLSDAPHELSSAEINPSSLVTLCSKYTSEPSWSSTLF 265
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: A0A8J9WZI5_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZI5_PHATR) HSP 1 Score: 193 bits (490), Expect = 1.460e-54 Identity = 116/290 (40.00%), Postives = 158/290 (54.48%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNGEDKDGFLEAM----SLDYSSVREEAAFLLCHG--------PDTIVDDVGTTCTGTRDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMGLAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDVKTGRPPFELPN-ETLEKLFARESATPTWTMPLFAL 831
+GE L GA EC+E L R+GK+++ILSN+S T RLPK GF D F G VTSGEE Y+ + G K + L W + + ++ S EEA F+L HG PD + T ++G+++ + + +DR +PM NPDF P G MPG I++ YE +GG V FGKPHKEHF V+ +GL K+ VVHVGDS+ HDIAGA G+ S+ + GG+ EELG++V + LP + LE+LF TPT +PL L
Sbjct: 14 NGEHGLEGAPECVEALARQGKKLIILSNSSSLAKDTSARLPKLGFDRDAFVGAVTSGEEASHYIQET-YAGKKCLFLTWKSPKTPSPVSVLQKYGNVSISDNVEEADFILLHGCEVMRGPGPDGEASE--TDLGHFMETGNLEIVDKILKPCLDRMIPMVCANPDFIYVKPDGDVASMPGKIAERYEQLGGSVTSFGKPHKEHFEACVRDLGLPKEKVVHVGDSIYHDIAGANATGISSILVVGGVHREELGIEVGS------LPERDALEQLFHTHGETPTHVVPLLKL 294
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: A0A7S0EVJ0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EVJ0_9CRYP) HSP 1 Score: 188 bits (477), Expect = 1.140e-51 Identity = 113/284 (39.79%), Postives = 157/284 (55.28%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNGE--DKDGFLEAMSLDYSSVREEAAFLLCHGPDTIVDDVGTTCTGTRD---SGSVK-PYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMG--LAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDV-KTGRPPFELPNETLEKLFARESATPTWTMPLF 825
+G + LPGA+EC L + GK++ ILSNTS+R +L GF + + +TSGEE ++++ K + G V L W E D D FL+ +++ S V A F+LCHG + +V D T+ G D G V Y L + A+ R L M N D+S P G +MPGLI ++Y+ MGG+V +FGKPH EHF +K G + VVHVGDSL HDI GA A +DSVFI GG+ +++G+ V G E E ++KL E P W + F
Sbjct: 96 NGAIPLPGALECFNALNKAGKKIAILSNTSRRSKDAFKKLRALGFELESEESVITSGEECWKHM-KESMDGKSCVYLTWKREIEDADKFLDGLNISTSDVSS-ADFILCHGSEIVVGDPSTS-PGETDFIKHGDVSLSYNQLLKAALKRGLQMLVANADYSAVLPDGSLGHMPGLIGQQYQLMGGKVKWFGKPHPEHFQACLKTFGKDVLPTRVVHVGDSLDHDIQGAMDANIDSVFILGGVHAQDVGLRVGNDGSLSGETDEEKVDKLLTDEGYYPKWILEQF 376
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: A0A1Z5JT37_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT37_FISSO) HSP 1 Score: 184 bits (468), Expect = 3.850e-51 Identity = 112/279 (40.14%), Postives = 159/279 (56.99%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNGE-DKDGFLEAMSLDYSSVREEAAFLLCHGPDTI--VDDVGTTCTGTRDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMGLAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDVKTGRPPFELPN-ETLEKLFARESATPTWTMPLF 825
DG L GA + + L+ +GK+++ILSN+SK FT+ +LP+FG F VTSG+E Y+ ++ A+ L W+ + D D FL+A + + E+A F+L HG + D C T D V+P L + V+ LPM NPDF + G YMPG I++ YE++GG+V FGKP+KEHF ++++ L + VVHVGDSL HDI GA AGLDS+F+AGG+ EL P E+P+ E+ +LF R PT +PLF
Sbjct: 36 DGTKGLVGAADAVRSLKARGKKLIILSNSSKLTDFTLQKLPQFGLEPSDFVHAVTSGQEACAYVRQHHFQQ-PALFLTWSSQSDADVFLQACGIPVVTRVEDAKFILLHGARRLYGTDLDLEQCYMTGDLTVVEP---LLKKCVEHQLPMICANPDFVMVRTDGRLVYMPGTIAQRYEELGGKVTSFGKPNKEHFQACLRELELPAEKVVHVGDSLHHDIMGANAAGLDSIFVAGGVHRHELD------NLPGEVPSRESCLELFERHGQFPTHVVPLF 304
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: A0A7S0C8U6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8U6_9STRA) HSP 1 Score: 182 bits (462), Expect = 4.160e-50 Identity = 110/292 (37.67%), Postives = 157/292 (53.77%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGW-NGEDKD--------GFLEAMSLDYSSVREEAAFLLCHGPDTIVD-----DVGTTCTGT-RDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMGLAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDVKTGRPPFELPNETLEKLFARESATPTWTMPLFAL 831
+G LPGA EC+E+L + K+ +ILSNTS T+ +LPK GF F+G VTSGEE +++K K + W NG G ++ ++ + E+A F++ HG I + T G+ ++G + + R+LPM NPDF + P G +MPG I + YE MGG+ YFGKPH HF ++ +GL ++ V HVGDSL HD+AGA +G+ S+F+ GGI E+LG + G P NE L+KLF +E TPT +PL L
Sbjct: 35 NGSCGLPGAPECVEKLAAQNKKFIILSNTSSSSKATIAKLPKLGFDPINFEGAVTSGEEAGLHVSK-AYQSKKVLWFTWANGATPSPLDFLARCGSGDSRGIEVADSIEDADFIIAHGCGVIRGSGKDGEAKETSLGSFHENGDFSVLDPVLEQCAKRNLPMVCANPDFIMVKPDGSKGHMPGKIGQRYESMGGKCEYFGKPHVPHFEACLRDLGLDRNRVAHVGDSLHHDVAGANNSGIASIFVTGGIHREDLG-SPELGTLPT---NEALQKLFKKEGQTPTHVIPLLRL 321
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: A0A0G4G895_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G895_9ALVE) HSP 1 Score: 184 bits (467), Expect = 4.930e-49 Identity = 104/247 (42.11%), Postives = 143/247 (57.89%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNGEDKDGFLEAMSLDYSSVREEAAFLLCHGPDTIVDDVGTTCTGT---RDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMGLAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDVK 732
+G LPGA++CLE L++ GK++VILSN+S++ +N L K GF D+F G VTSGEE YL N G A + W G + D F+EA + + EEA L+ G + I + T R +G +K + + V+R +P+ NPDF V P G +MPG+I+ YE +GG+V FGKP K HF +V+ + L + VVHVGDSL HDIAGA AGL S+FIA GI E ++
Sbjct: 30 NGAYPLPGALDCLERLQKAGKKMVILSNSSRKAFDCINGLKKLGFDVDVFVGAVTSGEEASTYLRDN-FSGKIATWMRWEGRESDPFIEAAEVKIGPI-EEAEVLVLQGVEIISEGSDRPLTSAPCFRRTGDLKDHMPFLKKGVERGIPLVCANPDFQVLEPSGSRAFMPGVIAAAYEKLGGKVLRFGKPGKTHFEASVRMLELPPERVVHVGDSLEHDIAGACGAGLASIFIAEGIHKHETHTTIR 274
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: L1JPQ0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPQ0_GUITC) HSP 1 Score: 184 bits (467), Expect = 6.440e-49 Identity = 112/283 (39.58%), Postives = 160/283 (56.54%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNGE--DKDGFLEAMSLDYSSVREEAAFLLCHGPDTIVDDVGTTC--TGTRDSGSVK-PYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMG--LAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDV-KTGRPPFELPNETLEKLFARESATPTWTMPLF 825
+G + LPGA+EC E L++ GKR+ ILSNTS+R + +L GF+ D + +TSGEE ++++ + + G V L W E D D FL+ +++ S V A F+LCHG + IV++ ++ TG + G+V Y + +A++R L M N D+ N LI ++Y+ MGG+V +FGKPH EHF +K G + VVHVGDSL HDI GAA A LDSVFI GG+ +E+G+ K G E E + KL A E P W + F
Sbjct: 39 NGAIPLPGALECFESLKKAGKRIAILSNTSRRSKDALKKLRALGFQLDSEESVITSGEECWKHMNER-MNGKSCVYLTWKREVEDDDKFLDGLNISTSDVST-ADFILCHGSEIIVENSSSSPVETGFIEHGNVLLAYQKVLAVALNRGLEMLVANADYRHANNSSN---QTSLIGQQYQLMGGKVKWFGKPHSEHFQACLKTFGEDIKYTRVVHVGDSLDHDIQGAADANLDSVFILGGVHAQEVGLTTGKDGLTTGEQDEEKINKLLADEGCHPKWILEKF 316
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: R1BTU2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BTU2_EMIHU) HSP 1 Score: 177 bits (449), Expect = 2.290e-48 Identity = 110/279 (39.43%), Postives = 149/279 (53.41%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGV--TSGEEGYQYLAKNGLVGGKAVLLGWNGEDKDGFLEAMSLDYSSVREEAAFLLCHGPDTIVDDVGTTCTGTRDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGG--CWYMPGLISKEYEDMGGRVHYFGKPHKEHFNTAVKKMGLAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDVKTGRPPFELPNETLEKLFARE-SATPTWTMPL 822
+G AL GA + L GKR+ ILSN+SKR+ +++ LPK GF +D F TSGEE + L L +G+ +L+ + + V E A FLL G + + D SG V P+ LF A+ R LPM NPDF V+ P+ G Y PG I+ YE++GGRV Y+GKPH +HF V +GL K+ V+H+GDS+ HD+AGA AG+ FIAGGI E+LG+ P ELP+ + E A PT T+ L
Sbjct: 27 NGATALDGAPALVARLAAAGKRLGILSNSSKRKEWSLRELPKLGFSADHFVAAAVTTSGEEAWHALGAEWRGKACVWLSKKDGDGVSDYLDGTGVGLADV-ERADFLLASGTNVVRDGASVLAVDCEQSGDVTPFEDLFSRAIARALPMICANPDF-VSPPKPGKAMTYQPGHIAARYEELGGRVIYYGKPHPQHFEACVAGLGLPKERVLHIGDSMHHDVAGAVRAGVPVAFIAGGIEHEKLGI------PSGELPSAAALRALCEEFCAIPTHTVAL 297
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Match: A0A7S4D550_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D550_HETAK) HSP 1 Score: 177 bits (450), Expect = 6.780e-48 Identity = 122/287 (42.51%), Postives = 167/287 (58.19%), Query Frame = 1
Query: 1 DGEVALPGAVECLEELRRKGKRVVILSNTSKREAFTMNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGL-----VGGKAVLLGWNGEDKDGFLEAMSLDYSSVREEAAFLLCHGPDTIVDDVGTT-CTGTRDSGSVKPYASLFQIAVDRDLPMYNVNPDFSVNNPRGGCWY-MPGLISKEYEDMGGRVHYFGKPHKEHFNT---AVKKMGLAKDSVVHVGDSLAHDIAGAATAGLDSVFIAGGISGEELGVDVKTGRPPFELPNE-TLEKLFARESA-TPTWTMPLF 825
+G A GA+E +E L ++GKR+VILSN+SKR+ + L K GF D F G VTSG+ Y+ + +G + V+ G N +D +L M + S++ EEA FLL G I+D V TT C + +S + A++ A R LP+ NPD + R GC MPG+I K+YEDMGG VHY GKPH + A+++ G +D V VGDSL HDI GA+ AG++S+FI GGI EELG+ + GR E P++ LEKL+AR PT +MP F
Sbjct: 85 NGTHAYQGAIEAVERLAQRGKRLVILSNSSKRKKTGVKNLRKMGFNPDHFCGFVTSGDTVYEEMISRAREPFKSLGTRCVVFG-NADDDKAYLSEMQCELSTI-EEADFLLARGNFVILDAVETTKCDRSLESEA--RVAAVLAAAAARGLPLLVANPDIA----RPGCGSPMPGVIGKQYEDMGGTVHYTGKPHSSVYELCFQALEEDGGNRDRVCAVGDSLDHDILGASRAGIESIFIIGGIHSEELGIK-EGGR---ECPSQKALEKLYARHGGGVPTHSMPAF 359 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15703.3717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15703.3717.1 >prot_H-elongata_contig15703.3717.1 ID=prot_H-elongata_contig15703.3717.1|Name=mRNA_H-elongata_contig15703.3717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp MNRLPKFGFRSDLFDGGVTSGEEGYQYLAKNGLVGGKAVLLGWNGEDKDGback to top mRNA from alignment at H-elongata_contig15703:1454..4775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15703.3717.1 ID=mRNA_H-elongata_contig15703.3717.1|Name=mRNA_H-elongata_contig15703.3717.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3322bp|location=Sequence derived from alignment at H-elongata_contig15703:1454..4775- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15703:1454..4775- >mRNA_H-elongata_contig15703.3717.1 ID=mRNA_H-elongata_contig15703.3717.1|Name=mRNA_H-elongata_contig15703.3717.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1452bp|location=Sequence derived from alignment at H-elongata_contig15703:1454..4775- (Himanthalia elongata Himel1 dioecious)back to top |