mRNA_H-elongata_contig15619.3667.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI) HSP 1 Score: 172 bits (437), Expect = 5.200e-41 Identity = 168/543 (30.94%), Postives = 228/543 (41.99%), Query Frame = 1
Query: 4 IVTRTEHCQFVGCEKTPKYGQRRGPLSFCQLHKRFGMYTNRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGHTATVYPPFQSTSSKTSGPSSVKPKDQESDQADLPGQVEAGSLGHDGSQRTTASSLVTIIVATPQSRKVCEVSGCRIQPSYGPSG----------KKEGMVGLKNRPXXXXXXXXXXXXXLPGCRPIYCAKHKKAQMVHILKETTARNKGEVMRRDLAKILKASSEPVRAKPKRRLLAKRSKQETLRQKLHKEIEDAGELDRKCASPPQLQQQKNDEQKTSDDGIGNERGAAATISPTLPSSRSNFTLEFPEKAPGPTFMPVLEHTAIKAGDPDTLLSASVAHLPRPGQTTSSWPASCLDITPSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEAAAIGVIGCS------GAGDDAVSG----MPKVTWRKLSPTEILEVAAGQPISNMIRNILPGSVDEAALGE 1572
+ +RTE+C+ GC +TP+YG++ GPL+ CQ HKR G+YT R+G LL+ATRDGSA++E G S + + T A R+ CE C IQPSYG G K++ MV LKNRP L R +YC HKK MVH+LKE K E+ R KRR + + R H E AG ++ LQQ+K + K +G +R + + PT N +AS +HL GQ+ + PSD+M + SA A SGSG+RARV SRK LEASGK+ E QW+TKEKKEE+A+ N+ +AQRKAA AAGL++GEVIEA A G+G ++ G + K +WRKL+PTEIL A +P + + + G+ +AA+ E
Sbjct: 177 VASRTEYCKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVATRDGSAFRE----------------------------------------------------------------------KAGSSSSVNSNKNGTATGAAA----RRKCEAPDCTIQPSYGDPGTSRPRFCSSHKEKQMVSLKNRPCLFPGCDIRPHYGLSMGRAVYCVSHKKDGMVHLLKEAKNLEKEELKR------------------KRRECGEVEEDLADRDSGHDGEEQAG------SAEGSLQQRKRKKXKAKREGT--KRSSGSHGKPTNKKKNKNT-------------------------------AASPSHLRTAGQSA---------LAPSDDMRLLQSARQSAHEEA--SGSGRRARVPSRKVLEASGKMAGETAQWMTKEKKEEQARINKRFRAQRKAAAAAGLKIGEVIEATASPAPRAESEEEGLGSGGTSIRGGGSPVSKASWRKLTPTEILPAAGKKPSAEGAASEVRGN--DAAMAE 575
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: A0A6H5K6U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6U1_9PHAE) HSP 1 Score: 108 bits (270), Expect = 3.450e-23 Identity = 73/142 (51.41%), Postives = 89/142 (62.68%), Query Frame = 1
Query: 1138 PSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEAAAIGVIGCSGAGDDAVSGMPKV---TWRKLSPTEILEVAAGQPISNMIRNILPGSVD 1554
PSDEM ++ DSAR A+ SG G+RAR SRK LEASGK+ E QW+T+EKKEE+A+ + LK QRKAA AAGL+ GEVIEAA +GAG D + G +WRKL+P EIL+ A R LPGS D
Sbjct: 9 PSDEMRLLQEARDSARAAAEASGYGRRARAPSRKFLEASGKIVGESAQWMTREKKEEQARLSLQLKEQRKAAAAAGLKPGEVIEAAT-----AAGAGGDGIRGENAPWNGSWRKLTPAEILQAAGKTAGVGKARKSLPGSTD 145
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 115 bits (289), Expect = 6.970e-23 Identity = 141/476 (29.62%), Postives = 214/476 (44.96%), Query Frame = 1
Query: 7 VTRTEHCQFVGCEKTPKYGQRRGPLSFCQLHKRFGMYT-NRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGHTATVYPPFQST-SSKTSGPSSVKPKDQESDQADLPGQVEAGSLGHDGSQRTTASSLVTIIVATPQSRKVCEVSGCRIQPSYGPSGKKEGMVGLKNRPXXXXXXXXXXXXXLPGC-RPIYCAKHKKAQMVHILKETTARNKGEVMRRDLAKILKASSEPVRAKPKRRLLAKRSKQETLRQKLHKEIEDA-----------GELDRKCASPPQLQQQKNDEQKTSDDGIGNERGAAATISPTLPSSRSNFTLEFPEKAPGPTFMPVLEHTAIKAGDPDTLLSASVAHLPRPGQTTSSWPASCLDITPSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEA 1392
V + C++ GC K+ KYG R P S CQ HKR G YT NR+G+LL+ATRDG A++ A V A T+ A E I A+ P +ST SS +S PS KPK+ S ++ + S R S P++R C GC +P++G LPG R +YC HKK MV + E A N E S+ P K K++ AK+ ++ T + + A G + ++ +++E K + G+G G+ I+ + S +++ P P+++ T+ DT A P+P S + PS EM ++ ++A+ A+ SGSG+R R SR+ALEASG+++ +G QW+T+EKK E+A+ N L+ +RK + AGL+VG V+EA
Sbjct: 109 VPKAPRCEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVP-AVTVPPSPASSE----IAGTEAASARPRRRSTGSSGSSVPSHRKPKENLSSSVHT---LKRKNRPGTSSSRHEESP-------APKNRS-CLFPGCGARPTHG----------------------------LPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKS-------VTSAAPTEGKKKKQTQAKKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDGGHRGAKKIRDNETKVNR-GMGASGGSVGAIATAAAAGTSEMSVK------SPAAKPLVKSTSEAKEPADT-----TAPPPQPTSRPSDG------MAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEA 515
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 109 bits (272), Expect = 2.510e-21 Identity = 142/477 (29.77%), Postives = 207/477 (43.40%), Query Frame = 1
Query: 1 IIVTRTEHCQFVGCEKTPKYGQRRGPLSFCQLHKRFGMYT-NRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGHTATVYPPFQSTSSKTS-GPSSVKPKDQESDQADL---PGQVEAGSLGHDGSQRTTASSLVTIIVATPQSRKVCEVSGCRIQPSYGPSGKKEGMVGLKNRPXXXXXXXXXXXXXLPGC-RPIYCAKHKKAQMVHILKETTARNKGEVMRRDLAKILKASSEPVRAKPKRRLLAKRSKQETLRQKLHKEI--EDAGELDRKCASPP-----QLQQQKNDEQKTSDDGIGNERGAAATISPTLPSSRSNFTLEFPEKAPGPTFMPVLEHTAIKAGDPDTLLSASVAHLPRPGQTTSSWPASCLDITPSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEA 1392
++ + C++ GC K KYG R P S CQ HKR G YT NR+G+LL+ATRDG A++ A V A T+ A E I A+ P +ST S S PS KPK + S + E S GH+ S S C GC +P+YG LPG R +YC HKK MV++ + A N E R A +E R K T Q+ K+ E + + D K A+ Q ++ D +K + G+G + I+ + S + + P ++ T I DT+ A P+P S ++PS EM ++ ++A+ A+ SG G+RAR SR+ALEASG+++ +G QW+T+EK+ E+A+ N L+ +RK + AGL VG V+EA
Sbjct: 53 LLAPKAPRCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVL-AVTVPPSPASSE----IAGMEAASAQPRRRSTGSSGSLVPSHRKPKAKLSSSVHTLKRKNRPEPSSSGHEESPALQNRS--------------CLFPGCDARPTYG----------------------------LPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVTAV----APTEGKRKKXXXXXXXXXXXSMTADQRGAKKARRESSIKEDNKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTK------SSAAKPPVKSTHIAKEPADTM-----ALPPQPTNRPSEG------MSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEA 461
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI) HSP 1 Score: 110 bits (274), Expect = 5.380e-21 Identity = 154/532 (28.95%), Postives = 211/532 (39.66%), Query Frame = 1
Query: 1 IIVTRTEHCQFVGCEKTPKYGQRRGPLSFCQLHKRFGMYTNRNGQLLLATRDGSAYKEADGA--AAVGGAGTIGHIAAKEETQFNIPTGHTATVYPPFQSTSSKTSGPSSVKPKDQESDQADLPGQVEAGSLGHDGSQRTTASSLVTIIVATPQSRKVCEVSGCRIQPSYGPSG----------KKEGMVGLKNRPXXXXXXXXXXXXXLPGCRPIYCAKHKKAQMVHILKETTARNK-GEVMRRDLAKILKASSEPVRAKPKRRLLAKRSKQETLRQKLHKEIEDAGELDRKCASPPQLQQQKNDEQKTSDDGIGNERGAAATISPTLPSSRSNFTLEFPEKAPGPTFMPVLEHTAIKAGDPDTLLSASVAHLPRPGQTTSSWPASCLDITPSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEAAAIGVI-------------------GCSGAGDDAVSGMPKVTWRKLSPTEILEVA 1500
+++ + CQ C+ TP+YG GPL+FC+ HKR GMYT R+G L +ATRDGSA+++ G A V G G AA + I TG T P S KT P QA E + GS++ RK+CEV GC +QPS+G G K+EG V LKNRP XXXX H+LKE + K E+ + K+LK++ + R+ +R K++K+ET + + E+E G+ +K ++ SD G+ GA DE P+ D G+RAR SRK LEASG+V +EG Q LTK KKEEE + R +K QR+AA +AGL++GEVIEA + + G G GD G +WRKLS + +L A
Sbjct: 74 VVLEQAVQCQHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGSAFRKDPGPPRATVNG-DREGATAAADAAA--ITTGGPETATPATPSRGPKTDAXXXXAPTVLSPSQA-----AEEVNTPPPGSKKGQTLH-----------RKLCEVPGCNVQPSFGAPGTGKPRFCTGHKQEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAESLGKLQELDTQRRRKLLKSTCKKERSADAKRP-NKKAKRET-KGDVSPEVEGKGQKTKK-------------KKDKSDKGVPQREGA-------------------------------------------------------------------------DES--PRAADDXXXXXX-----GRRARAPSRKFLEASGRVADEGAQLLTKAKKEEENRLKREMKEQRRAAKSAGLKLGEVIEATTVPLCEEXXXXXXXXXXXXXXXXRGSDGGGDAFSVGEASPSWRKLSLSGMLRAA 491
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.070e-20 Identity = 146/467 (31.26%), Postives = 202/467 (43.25%), Query Frame = 1
Query: 25 CQFVGCEKTPKYGQRRGPLSFCQLHKRFGMYT-NRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGHTATVYPPFQSTSSKTSG-PSSVKPKDQESDQADLPGQVEAGSLGHDGSQRTTASSLVTIIVATPQSRKVCEVSGCRIQPSYGPSGKKEGMVGLKNRPXXXXXXXXXXXXXLPGC-RPIYCAKHKKAQMVHILKETTARNKGEVMRRDLAKILKASSEPVRAKPKRRLLAKRSKQETLRQKLHKEIEDAG-ELDRKCASPPQLQQQ-KNDEQKTSDDGIGNERGAA------ATISPTLPSSRSNFTLEFPEKAPGPTFMPVLEHTAIKAGDPDTLLSASVAHLPRPGQTTSSWPASCLDITPSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEA 1392
C++ GC K+ KYG R P S CQ HKR G YT NR+G+LL+ATRDG A++ A V A T+ A E I A+ P +ST S S PS KPK A L V A R SS PQ C C +P YG LPG R YC HKK MV + E A N + E R P KR KQ+ K H+E + G D++ A + + K D + + G RGA ++ + +S ++ A G + M A + P + + P Q TS P+ + PS EM ++ ++A+ A+ SGSG+R R SR+ALEASG+++ +G QW+T+EKK E+A+ N L+ +RK + AGL+VG V+EA
Sbjct: 61 CEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVP-AVTVPPSPASSE----IAGTEAASAQPRRRSTGSTGSSVPSHRKPK------AKLSSSVHALKR----KSRPGTSSSRHEESRAPQYHS-CLFPECGARPIYG----------------------------LPGAARAAYCFSHKKGSMVDLFSEAPAVN---------------NHEAKRVTPAAPTEGKRKKQK----KGHEERKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSR-PSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEA 461
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: A0A6H5KHQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ6_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.180e-20 Identity = 117/360 (32.50%), Postives = 157/360 (43.61%), Query Frame = 1
Query: 529 MVGLKNRPXXXXXXXXXXXXXLPGCRPIYCAKHKKAQMVHILKETTARNKGEVMRRDLAKILKASSEPVRAKPKRRLLAKRSKQETLRQKLHKEIEDAGELDRKCASPPQLQQQKNDEQKTSDDGIGNERGAAATISPTLPSSRSNFTLEFPEKAP--GPTFMPVLEHTAIKAGDPDTLLSASVAHLPRPGQTTSSWPASCLDITPSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEAAAIGVIGCS------GAGDDAVSG----MPKVTWRKLSPTEILEVAAGQPISNMIRNILPGSVDEAALGE 1572
MV LKNRP R +YC HKK MVH+LKE KG + R KRR+ GE++R A D G E A S+ ++ + +KAP G T P H +AS +H GQ+ + PSD+M + SA A SGSG+RARV SRK LEA+GK+ +E QW+TKEKKEE+A+ N+ +AQRKAA+AAG ++GEVIEA A G+G ++ G + V+WRKL+PTEIL A +P + + GS +AA+ E
Sbjct: 1 MVSLKNRPCLFPGCDIRPHYGFSMGRAVYCVSHKKDGMVHLLKEAKNLEKGSLER------------------KRRV--------------------CGEVERNLAK--------------GDSGHNGEEQAG--------SAEASLQQQKTKKAPKRGGTKRPSGSHGKPTNKKRSKNTAASPSHRRTAGQSA---------LAPSDDMRLLRNARQSAHEEA--SGSGRRARVPSRKVLEAAGKMADETAQWMTKEKKEEQARINKKFRAQRKAAVAAGPKIGEVIEATASPSPRVESEEDGLGSGATSIRGGRSPVSNVSWRKLTPTEILLAAGKKPFVEGAASEVRGS--DAAMAE 287
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 9.400e-15 Identity = 147/543 (27.07%), Postives = 217/543 (39.96%), Query Frame = 1
Query: 40 CEKTPKYGQRRGPLSFCQLHKRFGMYTNRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGHTATVYPPFQSTSSKTSGPSSVKPKDQESDQADLPGQVEAGSLGHDGSQRTTASSLVTIIVATPQ-SRKVCEVSGCRIQPSYGPSG----------KKEGMVGLKNRPXXXXXXXXXXXXXLPGCRPIYCAKHKKAQMVHILKETTARNKGEVMRRDLA----KILKASSEPVRAKPKRRLLAKRSKQETLRQKLHKEIEDAGELDRKCASPPQLQQQKNDEQKTSDDGIGNERGAAATISPTLPSSRSN------FTLEFPEKAPGPTFMPVLEHTAIKAGDPDTLL-------SASVAHLPRPGQTTSSW-------PASCLDITPSDEMNNPKK----NSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEAAAIGVI---------------------GCSGAGDDAVSGMPKVTWRKLSPTEI 1488
C+ TP+YG GPL+FC+ HKR GMYT R+G L +ATRDG A+++ G T G T T + ++ T+GP + P ++ P RK+CEV GC +QPS+G G K+EG V LKNRP XXXX H+LKE + K + + K+LK++ + R+ + L K++K+ET + E+E G+ +++++K+ SD G G RG + + P+S A + G + L+ SAS + P G T++ A + + P P++ ++ A AR SRK LEASG+V +EG Q LTK KKEEE + R +K +R+AA +AGL++GEVIEA A + G G D +G +WRKLS +I
Sbjct: 129 CDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGMLYVATRDGIAFRKDPGP--------------PRATVNGDREGVTTTA----DAAATTTNGPETAXPXXXXXXXXXXXXXXXXXXXXXXXXXXEEVNTPPPGSKKGPTLHRKLCEVPGCNVQPSFGAPGTGKPRFCTGHKEEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAASLGKLQELDTQRGQRRRKLLKSTCKKERSADAK-LPTKKAKRETTGG-VSTEVEGRGQ---------EIKKRKD----KSDKGKGPARGKGSIVDGKGPTSSGGKKAXXXXXXXXXXXXXXXXXXXXXXXXAGRKGSAENLIRLPASPRSASPSTTPPAGSATTASGNRLHLRTAPPVLVLPGGAAGVPQREGADDAPRAXXXXXXXXXXXXARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEKRRAAKSAGLKLGEVIEATAAPLSEEEXXXXXXXXXXXXXXXXSRGSDGGRDAFSAGEGSQSWRKLSQADI 638
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 3.330e-13 Identity = 139/532 (26.13%), Postives = 204/532 (38.35%), Query Frame = 1
Query: 25 CQFVGCEKTPKYGQRRGPLSFCQLHKRFGMYT-NRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGH-TATVYPPFQSTSSKTSGPSSVKPKDQESDQADLPGQV--EAGSLGHDGSQRTTASSLVTIIVATPQSRKVCEVSGCRIQPSYGPSGKKEGMVGLKNRPXXXXXXXXXXXXXLPGC-RPIYCAKHKKAQMVHILKETTARNKGEVMRRDLAKILKASSEPVRAKPKRRLLAKRSKQETLRQKLH---------KEIEDAGELDRKCASPPQLQQQKNDEQKTSD-----------DGIGNERGAAATISPTLPSSRSNFTLEFPEKAPGPTFMPVLEHTAIKAGDPDTLLSASVAHLPRPGQTTSSWPASCLDITPSDEMNNPKKNSDSARVVADGSGSGKRARVLSRKALEASGKVKNEGTQWLTKEKKEEEAKRNRGLKAQRKAALAAGLRVGEVIEAAAIGVIGCSGAGDDA------VSGMPKVT--------WRKLSPTEILEVAA 1503
CQ GC +YG P CQLHKR G +T NR+G L ATR+G+A+++ + AK +I G+ A+ ST S + SS PK ++ + GQV A G G + S C GC +P YG LPG R +YC HKK MV + KET A + ++ + KP+ ++ + S K+ +DR A + +Q+ +E +D G +ERGA + S T+ T P + P+ P E P+P ++ A + PS E ++ + A+ A+ SG G+R R SR+ALEA+G++K G QW+++EKK E+ + L+ QRK AAGL+ G V+E G AGD V G T W+K+SP E L A+
Sbjct: 151 CQHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRK------------LAAATAKSPPPCSINKGNLAASDQSRLPSTGSSGAPSSSSHPKPGKT--SGTRGQVLKRANRPGLSGGNNRESQS---------SRDSACLFPGCDARPDYG----------------------------LPGATRAVYCFSHKKGPMVQLFKETPA-------------LPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSEKRSSGGKDERGAIS--SSTVTGENLTKTTAKPAASSLPSPAPAAE--------------------PKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNPGWQKVSP-ETLSAAS 595
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Match: D7G079_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G079_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 9.690e-12 Identity = 63/194 (32.47%), Postives = 83/194 (42.78%), Query Frame = 1
Query: 112 MYTNRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGHTATVYPPFQSTSSKTSGPSSVKPKDQESDQADLPGQVEAGSLGHDGSQRTTASSLVTIIVATPQSRKVCEVSGCRIQPSYGPSG----------KKEGMVGLKNRPXXXXXXXXXXXXXLPGCRPIYCAKHKKAQMVHILKET 663
MYT+R+G+LL+ATRDGSA ++A AV GP ++ K +V + +G+ +A + V T RK+CEV GC +QPSYG SG K +GMVGLKNRP L R +YCA HKK MVH+LKE+
Sbjct: 1 MYTSRDGKLLMATRDGSAIRKAAAPRAV---------------------------------------GPKAIPSK-----------KVAKRAPKPEGAADPSAGPRPDLRVQTMY-RKLCEVEGCLVQPSYGLSGTSRPRFCREHKSKGMVGLKNRPCLFPGCTTRPHYGLSKGRAMYCASHKKDGMVHLLKES 143 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15619.3667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15619.3667.1 >prot_H-elongata_contig15619.3667.1 ID=prot_H-elongata_contig15619.3667.1|Name=mRNA_H-elongata_contig15619.3667.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=628bp MYTNRNGQLLLATRDGSAYKEADGAAAVGGAGTIGHIAAKEETQFNIPTGback to top mRNA from alignment at H-elongata_contig15619:2..6502- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15619.3667.1 ID=mRNA_H-elongata_contig15619.3667.1|Name=mRNA_H-elongata_contig15619.3667.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6501bp|location=Sequence derived from alignment at H-elongata_contig15619:2..6502- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15619:2..6502- >mRNA_H-elongata_contig15619.3667.1 ID=mRNA_H-elongata_contig15619.3667.1|Name=mRNA_H-elongata_contig15619.3667.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3768bp|location=Sequence derived from alignment at H-elongata_contig15619:2..6502- (Himanthalia elongata Himel1 dioecious)back to top |