mRNA_H-elongata_contig15600.3658.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15600.3658.1
Unique NamemRNA_H-elongata_contig15600.3658.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Match: D7FI24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI24_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 4.400e-131
Identity = 293/626 (46.81%), Postives = 362/626 (57.83%), Query Frame = 1 
Query:    1 RAQDQNCQTVTGISLPAQDLRPGTWCWESLEKLGKAASIASAVAMTTVSEAENLTHQASRKMGI-------------------SSSRAAEDGLRRCGTPQPRLFKPTPIARRC-DGASRPRPRGELLFEELHRNPPTPYRRRAQRILDAETKASLTFTPEINARSTLLAEVHEACRPLLFDVPGGVSSTSSCGRGVTRGFRGNGGTKRV-TEC--TRR------ASSKALAKSLQLHSEHAEIEHRKQQRRKDFMSQSCPFTPDIGTSAAWPSRDANPDEFIRRLHNEHEEKNRRREAKRLVLYGDDESSEPVDSMTGRPLFTPTINDKRLRPRRSR-------------SERGVRPPEFDGNGGGSWGSGVRGVRLETDVEEKGQRWRSRRHK-----VFYRLWEQSLALGRRKEANAREWEEARKARASEGHVTDSRSADLVRAMRMRGLLQIYRMLLASVEYARLPERLPEGLNYDEAIELTIDKIDAIFDNEDDAWQEMTLEVAKADPSVLKSELVDIVASALAGHGQETLNLWEFCELLDASIRNLATTRGPMAHLFFTSGDGGSSFARTGEGTAVAPAAXXXXXXAQREEEAELKEMTFHPKVGKKSTAIARTMGRDGSK 1737
            RAQD  CQT TG+++ AQDLRP TWC ES E LG+ A+                                              S R  EDG+RRCG  +P +F+PTP+AR   DGA R RP+GELLF+ L+RNPPTP RRRA+++L A+T+A+ TF PEIN  S  LAE  EA R LL  V  G   + S GRG   G  G GG+KR  TE   TR       A SK + KS +LH+EHA+ E R+++RRK+ +SQSCPFTPDIG SAAWP ++   ++F+R              AKR  L+G   +S  +D  TGRP F+P IN K    R+               S  GV                 RG +   D  + G   R   H      +   LWE+ LAL RR+EA+AR  EEARK+ A+ GHV   RSA+L+RAMR+R L+Q YR LLASVEYARLPE    GL+YDEA+E    KI+AIFDN++DAWQEMTLEVAKADPSVLK ELV +V SALAGHG+ETL+L  FCELLDA++ NLA+  GP AHLF       ++ A        A AA        RE+ AELKEMTF P++   S AIARTMGRDG+K
Sbjct:  536 RAQDDTCQTFTGLAVAAQDLRPDTWCRESPEALGRVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSGSRRVGEDGVRRCGRRRPEMFRPTPVARPSGDGAVRARPKGELLFDNLYRNPPTPSRRRAKQVLQADTRATCTFAPEINECSRRLAEAQEARRDLLEFVRAG---SESDGRGG--GAEGKGGSKREDTEAAATRAGXXAGAARSKVIVKSHRLHAEHADNEQRRERRRKELLSQSCPFTPDIGVSAAWPIQETTTEDFVRXXXXXXXXXXXXXXAKRYTLHGAPHAS--IDPATGRPFFSPMIN-KTWAGRQHXXXXXXXXXXXXWFSRHGVTXXXXXXXXXXXXAG--RGAKRPGDKGKAGTDGRCFYHDDDDRPIHASLWERGLALERRREADARSREEARKSAAAAGHV-GGRSAELIRAMRVRSLVQTYRTLLASVEYARLPE----GLDYDEAMESITSKINAIFDNDNDAWQEMTLEVAKADPSVLKPELVPVVTSALAGHGEETLSLLGFCELLDAAVENLASAGGPTAHLFAPGAGRSAAGAXXXXXXXXAKAA--------REDSAELKEMTFRPRLNSHSKAIARTMGRDGTK 1138
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BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Match: A0A6H5JFG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG4_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 3.440e-66
Identity = 141/226 (62.39%), Postives = 169/226 (74.78%), Query Frame = 1 
Query: 1069 LWEQSLALGRRKEANAREWEEARKARASEGHVTDSRSADLVRAMRMRGLLQIYRMLLASVEYARLPERLPEGLNYDEAIELTIDKIDAIFDNEDDAWQEMTLEVAKADPSVLKSELVDIVASALAGHGQETLNLWEFCELLDASIRNLATTRGPMAHLFF---TSGDGGSSFARTGEGTAVAPAAXXXXXXAQREEEAELKEMTFHPKVGKKSTAIARTMGRDGSK 1737
            LWE+ LAL R++EA+AR  EEARK+ A+ GHV   RSA+L+RAMR+R L+Q YR LLASVEY+RLPE    GL+YDEA+E    KI+AIFDN++DAWQEMTLEVAK DPSVLK ELV +V SALAGHG +TL+L  FCELLDA++ NLA+  GP AHLF       + G    R+  GT  A A  XXXX A RE+ AELKEMTF P++  KS AIARTMGRDG+K
Sbjct:   75 LWERGLALERKREADARSREEARKSAAAAGHV-GGRSAELIRAMRVRSLVQTYRTLLASVEYSRLPE----GLDYDEAMESITAKINAIFDNDNDAWQEMTLEVAKVDPSVLKPELVPVVTSALAGHGDDTLSLLGFCELLDAAVENLASAGGPTAHLFAPGENEKECGMKRGRSAAGTGRAAA--XXXXKAAREDSAELKEMTFRPRLNSKSKAIARTMGRDGTK 293
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BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Match: A0A6H5JGR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR6_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 2.580e-40
Identity = 119/299 (39.80%), Postives = 153/299 (51.17%), Query Frame = 1 
Query:    1 RAQDQNCQTVTGISLPAQDLRPGTWCWESLEKLGKAASIASAVAM-----------TTV----SEAENLTHQASRKMGI----SSSRAAEDGLRRCGTPQPRLFKPTPIARRCD-GASRPRPRGELLFEELHRNPPTPYRRRAQRILDAETKASLTFTPEINARSTLLAEVHEACRPLLFDVPGGVSSTSSCGRGVTRGFRGNGGTKRVTECTRR------ASSKALAKSLQLHSEHAEIEHRKQQRRKDFMSQSCPFTPDIGTSAAWPSRDANPDEFIRRLHNEHEEKNRRREAKRLV 819
            RAQD  CQT TG+++ AQDLRP TWC ES E LG+ A+ AS               T V    +  +    ++ R+ G      S R  EDG+RRCG  +P +F+PTP+AR  D G  R RP+GE                           A+ TF PEIN  S  LAE  EA R LL  V  G  S  S G             K              A SK + KS +LH++HA+IE R+++RRK+ +SQSCPFTPDIG SAAWP ++   ++F+RRLH EH E+ RR +AKR  
Sbjct:  701 RAQDDTCQTFTGLAVAAQDLRPDTWCRESPEALGRVAATASXXXXXXXXXXXXXRSTAVKPGGATGDQRGPESRRRYGXXXSSDSRRVGEDGVRRCGRRRPEMFRPTPVARPLDHGVVRARPKGE---------------------------ATCTFAPEINELSRRLAEAREARRDLLDFVRAGSESDGS-GXXXXXXXXXXXXRKDTPAAXXXXXXXGAARSKIMVKSYRLHADHADIEQRRERRRKELLSQSCPFTPDIGVSAAWPIQETTKEDFVRRLHAEHAEQERRLQAKRYT 971
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI24_ECTSI4.400e-13146.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFG4_9PHAE3.440e-6662.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGR6_9PHAE2.580e-4039.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15600contigH-elongata_contig15600:262..7624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons10
Model size1737
Cds size1737
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15600.3658.1prot_H-elongata_contig15600.3658.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15600 262..7624 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929919.7506015-CDS-H-elongata_contig15600:261..5761622929919.7506015-CDS-H-elongata_contig15600:261..576Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 262..576 +
1691679208.615853-CDS-H-elongata_contig15600:261..5761691679208.615853-CDS-H-elongata_contig15600:261..576Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 262..576 +
1622929919.7672238-CDS-H-elongata_contig15600:956..10431622929919.7672238-CDS-H-elongata_contig15600:956..1043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 957..1043 +
1691679208.6331084-CDS-H-elongata_contig15600:956..10431691679208.6331084-CDS-H-elongata_contig15600:956..1043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 957..1043 +
1622929919.7833796-CDS-H-elongata_contig15600:1663..18081622929919.7833796-CDS-H-elongata_contig15600:1663..1808Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 1664..1808 +
1691679208.6438465-CDS-H-elongata_contig15600:1663..18081691679208.6438465-CDS-H-elongata_contig15600:1663..1808Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 1664..1808 +
1622929919.7979827-CDS-H-elongata_contig15600:1883..20051622929919.7979827-CDS-H-elongata_contig15600:1883..2005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 1884..2005 +
1691679208.6538625-CDS-H-elongata_contig15600:1883..20051691679208.6538625-CDS-H-elongata_contig15600:1883..2005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 1884..2005 +
1622929919.811292-CDS-H-elongata_contig15600:4137..42291622929919.811292-CDS-H-elongata_contig15600:4137..4229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 4138..4229 +
1691679208.6637168-CDS-H-elongata_contig15600:4137..42291691679208.6637168-CDS-H-elongata_contig15600:4137..4229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 4138..4229 +
1622929919.8232365-CDS-H-elongata_contig15600:4553..46101622929919.8232365-CDS-H-elongata_contig15600:4553..4610Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 4554..4610 +
1691679208.673381-CDS-H-elongata_contig15600:4553..46101691679208.673381-CDS-H-elongata_contig15600:4553..4610Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 4554..4610 +
1622929919.83851-CDS-H-elongata_contig15600:5110..54641622929919.83851-CDS-H-elongata_contig15600:5110..5464Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 5111..5464 +
1691679208.6829026-CDS-H-elongata_contig15600:5110..54641691679208.6829026-CDS-H-elongata_contig15600:5110..5464Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 5111..5464 +
1622929919.8553958-CDS-H-elongata_contig15600:5798..59251622929919.8553958-CDS-H-elongata_contig15600:5798..5925Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 5799..5925 +
1691679208.6929421-CDS-H-elongata_contig15600:5798..59251691679208.6929421-CDS-H-elongata_contig15600:5798..5925Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 5799..5925 +
1622929919.8656833-CDS-H-elongata_contig15600:6360..64381622929919.8656833-CDS-H-elongata_contig15600:6360..6438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 6361..6438 +
1691679208.7058735-CDS-H-elongata_contig15600:6360..64381691679208.7058735-CDS-H-elongata_contig15600:6360..6438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 6361..6438 +
1622929919.8758318-CDS-H-elongata_contig15600:7264..76241622929919.8758318-CDS-H-elongata_contig15600:7264..7624Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 7265..7624 +
1691679208.7157717-CDS-H-elongata_contig15600:7264..76241691679208.7157717-CDS-H-elongata_contig15600:7264..7624Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15600 7265..7624 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15600.3658.1

>prot_H-elongata_contig15600.3658.1 ID=prot_H-elongata_contig15600.3658.1|Name=mRNA_H-elongata_contig15600.3658.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=579bp
RAQDQNCQTVTGISLPAQDLRPGTWCWESLEKLGKAASIASAVAMTTVSE
AENLTHQASRKMGISSSRAAEDGLRRCGTPQPRLFKPTPIARRCDGASRP
RPRGELLFEELHRNPPTPYRRRAQRILDAETKASLTFTPEINARSTLLAE
VHEACRPLLFDVPGGVSSTSSCGRGVTRGFRGNGGTKRVTECTRRASSKA
LAKSLQLHSEHAEIEHRKQQRRKDFMSQSCPFTPDIGTSAAWPSRDANPD
EFIRRLHNEHEEKNRRREAKRLVLYGDDESSEPVDSMTGRPLFTPTINDK
RLRPRRSRSERGVRPPEFDGNGGGSWGSGVRGVRLETDVEEKGQRWRSRR
HKVFYRLWEQSLALGRRKEANAREWEEARKARASEGHVTDSRSADLVRAM
RMRGLLQIYRMLLASVEYARLPERLPEGLNYDEAIELTIDKIDAIFDNED
DAWQEMTLEVAKADPSVLKSELVDIVASALAGHGQETLNLWEFCELLDAS
IRNLATTRGPMAHLFFTSGDGGSSFARTGEGTAVAPAAAAAAERAQREEE
AELKEMTFHPKVGKKSTAIARTMGRDGSK
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mRNA from alignment at H-elongata_contig15600:262..7624+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15600.3658.1 ID=mRNA_H-elongata_contig15600.3658.1|Name=mRNA_H-elongata_contig15600.3658.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7363bp|location=Sequence derived from alignment at H-elongata_contig15600:262..7624+ (Himanthalia elongata Himel1 dioecious)
AGGGCACAAGACCAAAACTGCCAGACGGTGACCGGGATCTCCTTGCCCGC
CCAAGATCTTCGTCCAGGCACGTGGTGCTGGGAGAGCCTGGAAAAGCTTG
GCAAGGCCGCGTCGATTGCGTCAGCGGTAGCGATGACAACGGTATCAGAA
GCAGAAAATCTCACGCATCAGGCCAGTAGAAAAATGGGCATCAGTAGCAG
TCGGGCAGCGGAGGATGGACTGCGGAGATGCGGGACGCCGCAGCCGAGGC
TGTTCAAACCGACTCCGATAGCCAGGCGCTGCGACGGTGCTTCACGCCCC
AGGCCCAGAGGAGAGGTGCGACTTGTTGTTTTCGATTGATTCTTGTCGAG
GTTGTATTGTATGTGCTATTTCTCTCGGCACCGGATGATTCATGTGCACG
AGTATACCCCGGTCCAGACAAGCTGTGAGAACGTGGACGACGCTGACACG
CACCAGGCCGATCGCTGGTGCCGCTCTTTATTTCGACTTGTCATCTGTGG
TGGCATGGTAAAGGGAGCGGGAAATTACATATCATCGACTCCTGTGCCTC
CCTGATGCTACTGAATGCGCTATCTCTGTTCCATTTCCTCGATCCAAGAA
CATGTATTACTGCTACTCTACGATATATTGTATCTTCTTTCGTCTCGCTA
ACACTGTGGTTTATTCACGTGTGTGTGGGGGAGGGGGGGTAGCAGCTCCT
GTTCGAAGAGCTCCACCGAAACCCGCCGACGCCTTACCGACGAAGGGCCC
AGAGGATCCTCGATGCGGAGACCAAGGCGAGCGTTTTTTGGTGGTGCCGT
GGACCGCGCCAGGAAGCCGTCACAATTGCGATCGCGAAGCGGAAGCGGAA
GCGGAAGTGGAACCACCCGGCTAAGCTTTGTCGATGATTCTTTGGACTCT
TTGGACGTTTTGGGGGTGGGCCATTGTTTCGATTCTCTCCCCTCTTTTAT
ACCGGAATTGGGTACGGTTTTCTGACCGTATTTTTGTCGTTGTGGTTGTT
TACCGCGTGCTATCGTCGAGAACGGTGTTGTTCGCTTAAAAATGCAAGCG
GTGGCCAGTTCCCCCCGGCTATGTCGGCGGCCGACGCAGACATGTGCCGG
TAGCTACAACACATTATATTACCTTTTTCGAGCCCGGGATCACAGTCGTG
ACTTCCCACGTCGTGCGCCGGACGAGAAGCAGAGAAATCGTTGCGGGACA
GAAAAATAGCGATGCGGAGGGTCCTTCATGCAGGTGTTAAACGAAAGGTT
TTGTTGGGTCAAGAAGAGATAGCGATTTGCAAAAATGTCTTCCTAAAAAA
GGAGGGTCGTCTAAGGGAGTTCAGCTCCAAATATACTTTCCGACATCCCT
TCTTTTCGTTGTTTCGTGCGCATGGGTGCTCATTGCGTGCAACATCCATC
AGTTAACGTTCACTCCGGAGATCAATGCAAGGTCCACACTGCTTGCCGAG
GTCCACGAAGCGTGTCGACCACTATTGTTCGACGTTCCAGGCGGCGTCAG
TAGCACCAGCAGCTGCGGCCGAGGAGTAACGAGAGGCTTCAGAGGAAGTG
ACAGATTGGGGGACAGTATAACTGAACATAGCGATAGAAGTATTTCTGCT
CGGGTTGTCGATCGCAGCGCAGACGGCGGCACCAAGAGGGTCACAGAGTG
TACCAGACGCGCTTCTTCCAAGGCTCTTGCAAAGTCGTTACAGCTGCATA
GCGAACATGCGGAGATCGAGCATCGGAAGCAGCAGAGGCGAAAGGTGAAA
AGCGAAGGGGGGCGACTTAAACACGTTGTCGGGCATATGTATATATGTAT
ATATATATATATATACTGCGTGTACACAGATCCCCGTAGAACTTACCTGA
CGCCCTAACCAAAACCACCCGATACCGTGCATATTTTCATTAGTCAACCA
ACCAAGANNNNNNNNNNGCGCTAAGAAGGTGCGGATGTTAGGAGGGTTGG
AATGAGTTTAAAGACTTAAAAAAAAAAAAAATCTGTGAAGTCGGCTGGGA
TAGGGGTGGGGGCGTACTCAATTTTTCCATGTCTTAGCTATTAGATTGTT
GACCACGCGTCCTCGGGAGGAAGGACGGAAGATTGTCCCAATATGATCGA
TCGACAATGGCTAATCGATCATCCTTATTTTAATTTTAAAACATACGAAC
TCATTAAGACCCTTCGAACATCCACGCCTTCTTAGCACCATGAGAGGTGT
AGTCCAGGAGACCAACCATCGTCAGGTCCGGATGTGGACATTACTACATT
TAAGCACAAAATCGTCATATGTGATTTTTCGTGTTCCCCGGTTGTAAATT
GATCGGGCCAACGGTTAATAATGTTGGTGATCCCGTCATTGTCTCGTACA
CTTTCATTATCCATAATATGGGGACTATGACGCCAAACCAGAGTACTATA
GCCTAGAGAGTCAACTGTGGTTAGGAAAGGTTAAGCAATGTGGTAGTGCA
AATATATTTTCACCACCTTATCAACGTCAGCTTTCGCCTCTTCAGGCCAC
TTCTTATCCCCCAGTTATAGTTACCACCTTTGGCCTCGCTGTCCAATGGA
ATTCTTTGAATTAATCTCTATCGCAGCAATACAAGCCTCTCTCTTCTTTT
AATTTAACGATACGATACGATACTATACTATACTATACTATACTATACTA
TACTATACTATACTATACTATACTATACTATACTATACTATACTATAATA
TACTACACTATGCTATATTATACTATACTATACTATACTATACTATACTA
TACTATACTATACTATACTACACTATACTATAATATACTACACTACACTA
TACTATACTATACTATACTATACTATACTATACTATAGCCTATATACTTC
AAGTACCGCAAAGGGACTTTGATGTCCGCGCGAATGCATAGGCGCCGTAC
GCACACCTAATACGCAACCGTATGTGCTGCGTGATGCACTCAGACTATAG
CATGTCCATAATACTTCTGGGGAAGTACTATAATAATAACAAGTTAATGG
TTGCACTGGGGCTTTCCAATAAGCAGGTATTCTGTAGAGAATGGTTCTAT
AGAGAATGCGATGCGTTTCACCCCTTAGGGAAGATACAAGAGTTTTCGCC
CGATGTCTTGAGCTCACAGAGCACACTGCTTAAACTCCCCTATGTCTCAT
CGGAGGGGGTAGTGACAACACAACGATAGGGGTGAGGGGAAAATTTATTT
AGTCTCCCCAGTTTAGGACGTGATAAAAAAAAAACTCGTCCCCCTCCTGG
GGATCCAATCGTCGTACTTCGGATCATAGCTCATTATGTGGGGTACATAA
TGACGGCACAGTAAAAGAGAGGCAAGATACTTTTTGGTTCCAGCAAAGGA
AAAATTCAACCCATTCCCTCCCCTAATCAGGGACGTGTAAGCACTTCCCC
CCACTATCACCATCACCATCGCCATCATTCTCTCCCCCCCTTCATATCGT
TGGATGATTCGGGGGTAAAGTGTAAAGTCTAGTGAGGGAAGGGGCTTCGG
GAGATGGCGCTGCTGGCTGATTGCTGCTGTTGTAATTTGTTGAGCGCGTT
GTTTTTTGGCGTGTCGCCACAGGAGGATGTTGCTATTTAGCAGCGAAAGC
AACCGTAAAAAGGCGTTATAATAAAAAAGAAGTCGACCGGCGGCATGCCG
AAAAGCCCGCTTTGTCAGGTTCGGTTCCTTAGCGACCAGGACGCGCTCTT
GGTCACCAATCAGCGACCGTATTTTAAGTTGAAGGCTTTACGCCGGGGTG
CACAGAGCATATTCCAGGTCTTCTGACCCAGCCCCGCTGTCCAGTAACAT
CACCACACCTACTGCAAAAGTTAACAAAAATTCCAAAAAAGTATGTTCTT
CCTTGTCATCCCGTACCACCGGGCAGGATTTCATGTCTCAGTCGTGCCCC
TTCACGCCAGACATCGGTACGAGCGCTGCGTGGCCGTCCCGGGACGCAAA
CCCGGATGAGTTTATCAGGTGATAAAGGGAACCGCTAATCGACGAGGGTA
TCGTTTATCTCGAAGCCGCAGGCAGAGAAAGGGGTGACTGCGCAAGTCGT
ACATTATGGATTTTCGGCGACAGGCATTGAATCCCAGACTCTGGGGGGAA
AAAACGCTTGATCTCTCAAATGTGTGTCTAGACGCAACGGCTACGCGCAG
GCTGCACGAAAGTATAACAACATATCTGCGCACATCTACGCGTGCTTACC
GATAAAACAAGCGCCGCACGCCCTACTATTTTTTTTGCTCTTCGATTCGA
TTCGATTCAATTCGACATGTCACGTCTTCGTCGTGGTTGCAGACGGTTAC
ACAACGAACACGAGGAGAAAAACCGTCGGCGTGAAGCCAAGCGACTCGTG
TGAGAAACTCTCCGGGGTATGCCGCGCACGGAGAGCGGCAGCTTGTCTTA
TGTTTCATGTTTGTGCGAAAGGAGGTTGACACCGTACCGTCTATGGTGGT
AGCAGCACAGCCGTGTAGAGCGAACAACACGCCGAACTCTGCGCTTAACG
AAGCTCACGAGCACTAGCCCAGTTCCGCCACGCAAGGAAGTGCGTATCAG
TACCGAATCCATTTATCTCCAAGGCACAGAGAACTGAGAACATCCAAGAG
ACTCAGTCCTTCGTGCATGTGTGTGTGTGCACCAGAGGATAATGATTTTT
TCCACTTGGTGGGTTCGACTCTGCTCTCGTATGATTGCACGCGTGGAGAC
ATAGAGGAGGCGCGACAGCGACGAATCGACGCACTTGATAAGCTTTGAAC
GAACGAGAGAGATCGAACGTTTGTATCGCGTCCGCCTGCCTCTGCGGCCG
TCGCCGTCTTCGATTTCGTTCCTTTGTTTTTATCCGTGTTACCCTCAAGG
CTGTACGGCGATGATGAGTCCTCGGAGCCAGTAGACTCGATGACCGGACG
ACCGCTCTTCACGCCGACGATCAACGACAAACGCCTCCGTCCACGTCGAT
CGCGAAGTGAGAGGGGCGTCAGGCCACCCGAATTCGACGGGAACGGGGGC
GGTTCGTGGGGCTCGGGAGTGCGAGGGGTGCGACTGGAGACTGATGTTGA
GGAGAAGGGGCAGCGATGGCGAAGTCGAAGACATAAGGTCTTTTATAGGC
TATGGGAACAGAGTCTGGCGCTGGGGAGGCGCAAAGAAGCCAACGCTCGC
GAATGGGAGGAGGCAAGAAAGGCAAGGGCTTCGGAGGGACACGTCACCGA
CAGGTATATATACAGTATATATACATAACGTATAAGTATGTGAGTGCATA
TGTGAGGCAATGAGATAATTTGGTCCGTTTCTCGATTGACGCTGGGTGAG
ACTGCTTTAGCAGCGCCACCGTTCGTGCTTCGGCACAGCCTTGATATTGT
GTGTCAGCGTTCGATTGGGCGGGCCTGAATCACGAATCTTACCGCTTAAG
ATCAAACTCCCAAATCCCAACGGTCTCTCATCCAACACGCAGTTCCAGTA
CTCCACCACAAAAGAGTCGACGAGCCCGCAACCTATATCGACGAATTTCC
TTCACGCCATCCAATACGATAATACTTGCACTACGAGTAGATCCGCGGAC
CTGGTGCGTGCGATGCGAATGCGAGGCTTGCTGCAGATATATCGGATGCT
TTTAGCCTCTGTCGAATACGCCCGTCTTCCCGAGCGTCTTCCCGAGGGGC
TAAACTACGATGAGGTATGGCCGAGCTCGCGCCGCAAGCACTCACCGCAA
GACTTTTCCAGTCACATGTCTGCAGGCGTACGGTGTTCGTACCACGTTTC
ACCGATACTTTTTCACGCTCTTGAGATGTTCCGTAATGCTCGAAGACCCC
GGTGGATCAGCGAATTAACAGGTGCCTCGAATCAGAGGTTGTTGCTCTAC
GCTTTTCGGGGAACGCATTGCCCTCCTCCCCCTCCCCCTCCGAGCAGGGG
CTTCGGCTCTAGGCAAAACGGCAACGCCAGAAAAGATGACACCGACTTGT
TGCTCCCGTTGTTGCTGTGCGCTAGACCGTGATTTTTTACTATTAATACA
ATCTCCAGCCTTCGGTCCACACCCATATATGTATTTAATTACTGACTGAC
TTACTGACTTACGCCGACATATCTCGTTGTTCTCGTGACCAAATCACAGG
CGATTGAGTTAACCATAGACAAGATTGACGCTATCTTCGACAACGAAGAC
GATGCCTGGCAGGAAATGACCCTCGAGGTATCTTTCCCCTCCCCCCTACA
CCCAGCACGCCTTTTGGAGCTAAAACTCACTACTACTACTGTGTCTGTCG
CTGCCGAAAAGGGCGACAAGTGATAAATTACGCCTGGTACCTGGGAAGAG
CAATTATTTGTCGTCAGCGTGTTTTAGTGAACGAAACTATAGATTTGGAT
CTGGTAAAGGGTGACCAGCACAGCTGGCCAGTCTTATCTGCAAGCGATCA
GCTTACTGTAGTTACTGTGGTGGATGTTCAGTCTAACGACAAGAAAGGGG
GGTGCGCCACACCACTAACGAATCATCGAATGAAACATTAGAGAGGGAGA
AAGAAATACCAGGTATATATTATATCGGATGCCAGCCAGGACTGAAACAG
TAGGGTAGCTGTCCGGTCCGGGCCGGTCTTTTATCTACGGCACTTGCACG
AACCCTCCGGGGCATGGTTTTTCCATTGTTGCGTGGTCGCGACCTGCCTT
GCTCTCGTTGGATCAGCGAAAGGGGGCGGGGAGGGGGAGGTTGGGGATAT
GACGAATCCCTCCCCGACTTCAGGCGGGAACCGTATAATATCAGTAACTC
CCGATGGTACGGCTATCTAGTCCCTTATCTGGTTCAAATTGCTTTGTCTC
GGCCGCATGAATCCCATCGGGGGATTTCTTGAACATGCCCCCGGGAGGAG
TGACTGATTTTTATTCCACCGCCCCCTAATCTCGGGGGGACGGAGTAAAT
TCTCCTACTGTACACTCCTTCCCCTTTAATCGAGTCAATTTCTCGCCCCT
GATCCCATGCCATGTCTTCCCCCACCTCCCCACCCCCACTTTGCTTCCGG
AAGGTGGCCAAGGCCGACCCGTCAGTGCTGAAGTCCGAGCTAGTAGACAT
CGTCGCATCAGCTCTTGCTGGACACGGACAGGAAACTCTCAATCTGTGGG
AGTTCTGCGAGCTCCTAGACGCCTCCATACGAAACCTCGCGACAACGAGA
GGTCCGATGGCCCACCTATTTTTTACCTCCGGTGACGGAGGATCATCCTT
CGCACGGACAGGGGAAGGGACAGCGGTGGCTCCTGCTGCTGCAGCAGCAG
CGGAGAGGGCGCAGCGAGAAGAGGAAGCCGAGCTGAAAGAAATGACTTTC
CATCCGAAGGTCGGCAAAAAGTCGACGGCCATCGCGAGGACGATGGGCAG
GGACGGGAGCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig15600:262..7624+

>mRNA_H-elongata_contig15600.3658.1 ID=mRNA_H-elongata_contig15600.3658.1|Name=mRNA_H-elongata_contig15600.3658.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3474bp|location=Sequence derived from alignment at H-elongata_contig15600:262..7624+ (Himanthalia elongata Himel1 dioecious)
AGGGCACAAGACCAAAACTGCCAGACGGTGACCGGGATCTCCTTGCCCGC
CCAAGATCTTCGTCCAGGCACGTGGTGCTGGGAGAGCCTGGAAAAGCTTG
GCAAGGCCGCGTCGATTGCGTCAGCGGTAGCGATGACAACGGTATCAGAA
GCAGAAAATCTCACGCATCAGGCCAGTAGAAAAATGGGCATCAGTAGCAG
TCGGGCAGCGGAGGATGGACTGCGGAGATGCGGGACGCCGCAGCCGAGGC
TGTTCAAACCGACTCCGATAGCCAGGCGCTGCGACGGTGCTTCACGCCCC
AGGCCCAGAGGAGAGAGGGCACAAGACCAAAACTGCCAGACGGTGACCGG
GATCTCCTTGCCCGCCCAAGATCTTCGTCCAGGCACGTGGTGCTGGGAGA
GCCTGGAAAAGCTTGGCAAGGCCGCGTCGATTGCGTCAGCGGTAGCGATG
ACAACGGTATCAGAAGCAGAAAATCTCACGCATCAGGCCAGTAGAAAAAT
GGGCATCAGTAGCAGTCGGGCAGCGGAGGATGGACTGCGGAGATGCGGGA
CGCCGCAGCCGAGGCTGTTCAAACCGACTCCGATAGCCAGGCGCTGCGAC
GGTGCTTCACGCCCCAGGCCCAGAGGAGAGCTCCTGTTCGAAGAGCTCCA
CCGAAACCCGCCGACGCCTTACCGACGAAGGGCCCAGAGGATCCTCGATG
CGGAGACCAAGGCGAGCCTCCTGTTCGAAGAGCTCCACCGAAACCCGCCG
ACGCCTTACCGACGAAGGGCCCAGAGGATCCTCGATGCGGAGACCAAGGC
GAGCTTAACGTTCACTCCGGAGATCAATGCAAGGTCCACACTGCTTGCCG
AGGTCCACGAAGCGTGTCGACCACTATTGTTCGACGTTCCAGGCGGCGTC
AGTAGCACCAGCAGCTGCGGCCGAGGAGTAACGAGAGGCTTCAGAGGAAT
TAACGTTCACTCCGGAGATCAATGCAAGGTCCACACTGCTTGCCGAGGTC
CACGAAGCGTGTCGACCACTATTGTTCGACGTTCCAGGCGGCGTCAGTAG
CACCAGCAGCTGCGGCCGAGGAGTAACGAGAGGCTTCAGAGGAAACGGCG
GCACCAAGAGGGTCACAGAGTGTACCAGACGCGCTTCTTCCAAGGCTCTT
GCAAAGTCGTTACAGCTGCATAGCGAACATGCGGAGATCGAGCATCGGAA
GCAGCAGAGGCGAAAGACGGCGGCACCAAGAGGGTCACAGAGTGTACCAG
ACGCGCTTCTTCCAAGGCTCTTGCAAAGTCGTTACAGCTGCATAGCGAAC
ATGCGGAGATCGAGCATCGGAAGCAGCAGAGGCGAAAGGATTTCATGTCT
CAGTCGTGCCCCTTCACGCCAGACATCGGTACGAGCGCTGCGTGGCCGTC
CCGGGACGCAAACCCGGATGAGTTTATCAGGATTTCATGTCTCAGTCGTG
CCCCTTCACGCCAGACATCGGTACGAGCGCTGCGTGGCCGTCCCGGGACG
CAAACCCGGATGAGTTTATCAGACGGTTACACAACGAACACGAGGAGAAA
AACCGTCGGCGTGAAGCCAAGCGACTCGTACGGTTACACAACGAACACGA
GGAGAAAAACCGTCGGCGTGAAGCCAAGCGACTCGTGCTGTACGGCGATG
ATGAGTCCTCGGAGCCAGTAGACTCGATGACCGGACGACCGCTCTTCACG
CCGACGATCAACGACAAACGCCTCCGTCCACGTCGATCGCGAAGTGAGAG
GGGCGTCAGGCCACCCGAATTCGACGGGAACGGGGGCGGTTCGTGGGGCT
CGGGAGTGCGAGGGGTGCGACTGGAGACTGATGTTGAGGAGAAGGGGCAG
CGATGGCGAAGTCGAAGACATAAGGTCTTTTATAGGCTATGGGAACAGAG
TCTGGCGCTGGGGAGGCGCAAAGAAGCCAACGCTCGCGAATGGGAGGAGG
CAAGAAAGGCAAGGGCTTCGGAGGGACACGTCACCGACAGGCTGTACGGC
GATGATGAGTCCTCGGAGCCAGTAGACTCGATGACCGGACGACCGCTCTT
CACGCCGACGATCAACGACAAACGCCTCCGTCCACGTCGATCGCGAAGTG
AGAGGGGCGTCAGGCCACCCGAATTCGACGGGAACGGGGGCGGTTCGTGG
GGCTCGGGAGTGCGAGGGGTGCGACTGGAGACTGATGTTGAGGAGAAGGG
GCAGCGATGGCGAAGTCGAAGACATAAGGTCTTTTATAGGCTATGGGAAC
AGAGTCTGGCGCTGGGGAGGCGCAAAGAAGCCAACGCTCGCGAATGGGAG
GAGGCAAGAAAGGCAAGGGCTTCGGAGGGACACGTCACCGACAGTAGATC
CGCGGACCTGGTGCGTGCGATGCGAATGCGAGGCTTGCTGCAGATATATC
GGATGCTTTTAGCCTCTGTCGAATACGCCCGTCTTCCCGAGCGTCTTCCC
GAGGGGCTAAACTACGATGAGTAGATCCGCGGACCTGGTGCGTGCGATGC
GAATGCGAGGCTTGCTGCAGATATATCGGATGCTTTTAGCCTCTGTCGAA
TACGCCCGTCTTCCCGAGCGTCTTCCCGAGGGGCTAAACTACGATGAGGC
GATTGAGTTAACCATAGACAAGATTGACGCTATCTTCGACAACGAAGACG
ATGCCTGGCAGGAAATGACCCTCGAGGCGATTGAGTTAACCATAGACAAG
ATTGACGCTATCTTCGACAACGAAGACGATGCCTGGCAGGAAATGACCCT
CGAGGTGGCCAAGGCCGACCCGTCAGTGCTGAAGTCCGAGCTAGTAGACA
TCGTCGCATCAGCTCTTGCTGGACACGGACAGGAAACTCTCAATCTGTGG
GAGTTCTGCGAGCTCCTAGACGCCTCCATACGAAACCTCGCGACAACGAG
AGGTCCGATGGCCCACCTATTTTTTACCTCCGGTGACGGAGGATCATCCT
TCGCACGGACAGGGGAAGGGACAGCGGTGGCTCCTGCTGCTGCAGCAGCA
GCGGAGAGGGCGCAGCGAGAAGAGGAAGCCGAGCTGAAAGAAATGACTTT
CCATCCGAAGGTCGGCAAAAAGTCGACGGCCATCGCGAGGACGATGGGCA
GGGACGGGAGCAAGGTGGCCAAGGCCGACCCGTCAGTGCTGAAGTCCGAG
CTAGTAGACATCGTCGCATCAGCTCTTGCTGGACACGGACAGGAAACTCT
CAATCTGTGGGAGTTCTGCGAGCTCCTAGACGCCTCCATACGAAACCTCG
CGACAACGAGAGGTCCGATGGCCCACCTATTTTTTACCTCCGGTGACGGA
GGATCATCCTTCGCACGGACAGGGGAAGGGACAGCGGTGGCTCCTGCTGC
TGCAGCAGCAGCGGAGAGGGCGCAGCGAGAAGAGGAAGCCGAGCTGAAAG
AAATGACTTTCCATCCGAAGGTCGGCAAAAAGTCGACGGCCATCGCGAGG
ACGATGGGCAGGGACGGGAGCAAG
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