mRNA_H-elongata_contig156.3657.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5KT09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT09_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.560e-56 Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 1
Query: 70 MSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
MSRTTAETSFHHFCEK S+GLW TWVKLP G++L+KV EIYRKCGYPGA GSTDCTHF W GC FSE+ HTGKEGYTS+VVE TCDHSGRII A K
Sbjct: 1 MSRTTAETSFHHFCEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWSGCPFSEKNTHTGKEGYTSLVVECTCDHSGRIIAATK 97
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.060e-50 Identity = 77/120 (64.17%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 1 QVLGVLKVLAGENSFLDVAGFSRMSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
QVLGVL+ L N F DVA FS MSRTTAE SFH FC + GLW TW++LPEGEDL +V YR GYPGAVGS DCTH W C+FSE T H GKEGYT+VV EA CDH+GRI+ + K
Sbjct: 5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTK 124
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5KJD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD5_9PHAE) HSP 1 Score: 164 bits (415), Expect = 9.250e-50 Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 1 QVLGVLKVLAGENSFLDVAGFSRMSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGK 291
+VLG LKVLA F DVA FS MSRTTAETSFHHFCE S+GLW TWVKLP G++L+KV EIYRKCGYPGA GSTDCTHF WPGC FSE+ HTGK
Sbjct: 58 KVLGTLKVLASGCCFQDVASFSLMSRTTAETSFHHFCENFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEENTHTGK 154
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 167 bits (422), Expect = 8.100e-47 Identity = 76/120 (63.33%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 1 QVLGVLKVLAGENSFLDVAGFSRMSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
+VLGVL+VL N F DVA FS MSRTTAE SFH FC + GLW TW++LPEGE L +V YR GYPGAVGS DCTH W C+FSE T H GKEGYT+VV EA CDH+GRI+ + K
Sbjct: 210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTK 329
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5JJM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM8_9PHAE) HSP 1 Score: 150 bits (380), Expect = 2.800e-44 Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 70 MSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
MS TAE SFHHFCEK S LW TWVKLP G++L++V ++RK GYPGA+GSTDCTHF WPG SE ++TGKEGY +VVVEATCDH+GRII A K
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPIGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATK 97
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5KW69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW69_9PHAE) HSP 1 Score: 151 bits (381), Expect = 4.990e-44 Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 70 MSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
MS TAE SFHHFCEK S LW TWVKLP G++L++V ++RK GYPGA+GSTDCTHF WPG SE ++TGKEGY +VVVEATCDH+GRII A K
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATK 97
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5K1K5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K5_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.360e-43 Identity = 65/97 (67.01%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 70 MSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
MS TAE SFHHFCEK S LW TWVKLP G++L++V ++RK GYPGA+GSTDCTHF WPG SE ++TGKEGY +VVVEATCDH+G II A K
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGHIIAATK 97
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 155 bits (393), Expect = 2.110e-43 Identity = 74/120 (61.67%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 1 QVLGVLKVLAGENSFLDVAGFSRMSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
+VLGVL+VL N F DVA S MSR TAE SFH FC+ S GLW WV LPEGE L+KVA Y G PGAV S DCTH +WP C FSE H GKEGYT++V EA+CDHSGRI+ + K
Sbjct: 112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTK 231
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5L2S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S9_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.590e-42 Identity = 69/104 (66.35%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 1 QVLGVLKVLAGENSFLDVAGFSRMSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVV 312
Q L+VLA F DVA FS SRTTAETSFHHFCEK S+GLW TWVKL G+ L+KV EIYRK GYPGA GSTDCTHF WPGC FSE+ HT KE V+
Sbjct: 17 QGCDALEVLASGCCFQDVASFSLTSRTTAETSFHHFCEKFSEGLWDTWVKLLRGDSLKKVEEIYRKYGYPGATGSTDCTHFRWPGCPFSEKNTHTCKEDLPGVI 120
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.910e-42 Identity = 65/97 (67.01%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 70 MSRTTAETSFHHFCEKLSKGLWGTWVKLPEGEDLEKVAEIYRKCGYPGAVGSTDCTHFAWPGCSFSEQTLHTGKEGYTSVVVEATCDHSGRIIVAIK 360
MS TAE SFHHFCEK S LW TWVKLP G++L++V ++RK GYPGA+ STDCTHF WPG SE ++TGKEGY +VVVEATCDH+GRII A K
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATK 97 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156.3657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig156.3657.1 >prot_H-elongata_contig156.3657.1 ID=prot_H-elongata_contig156.3657.1|Name=mRNA_H-elongata_contig156.3657.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp QVLGVLKVLAGENSFLDVAGFSRMSRTTAETSFHHFCEKLSKGLWGTWVKback to top mRNA from alignment at H-elongata_contig156:4301..4663+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig156.3657.1 ID=mRNA_H-elongata_contig156.3657.1|Name=mRNA_H-elongata_contig156.3657.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=363bp|location=Sequence derived from alignment at H-elongata_contig156:4301..4663+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig156:4301..4663+ >mRNA_H-elongata_contig156.3657.1 ID=mRNA_H-elongata_contig156.3657.1|Name=mRNA_H-elongata_contig156.3657.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig156:4301..4663+ (Himanthalia elongata Himel1 dioecious)back to top |