mRNA_H-elongata_contig1558.3648.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1558.3648.1
Unique NamemRNA_H-elongata_contig1558.3648.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: D7G4C2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C2_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 8.650e-148
Identity = 235/371 (63.34%), Postives = 283/371 (76.28%), Query Frame = 2 
Query:    2 VFFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSD-GRIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGD-----------KTKPFVQNSVSGQPEHRIEPDAAPRPG---SAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            VFF +M+LCACCSP+FN+GFWGFK  +WA L++ ++FI+N+VFDTSGYVW ARIGAF+F IMQQ+VLIDLAYRIND +V+KA++ GDDS+  + YL AL+  S  LY GSL  IG MF++F GC  NE V+SLTLI  +A+T LQL G EGNLL++A+VT+Y TFLCFSAVSKTP S CNPFVGE+N T V+IGI LTVLSLFWVTLNAART+TALLGG A ++EEA GP+Q P         GD           KT+PFVQ +V+ Q +  +   A+PRP    SA    +   DGGLGWRFNVVMVLISM+F M LTNWGDIN + +SSDPKNGWTAMWL T  QW+C+IIY WTLVAP VFPDR+FS
Sbjct:  106 VFFALMALCACCSPVFNHGFWGFKFMLWAVLMIATLFITNDVFDTSGYVWVARIGAFIFTIMQQIVLIDLAYRINDGLVEKASEHGDDSEEAKPYLCALLTASGVLYTGSLCAIGAMFHYFQGCAENELVMSLTLILAVAITALQLLGGEGNLLASAVVTSYATFLCFSAVSKTPTSSCNPFVGESNTTVVLIGIALTVLSLFWVTLNAARTVTALLGGQANEVEEAPGPVQAP--------GGDGGGXXXXXXXXKTRPFVQGAVTAQ-DQDVGAGASPRPATPASAGTPSAAQSDGGLGWRFNVVMVLISMFFGMMLTNWGDINEDGESSDPKNGWTAMWLTTTGQWVCYIIYAWTLVAPLVFPDRDFS 467
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BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A836CG76_9STRA (Serine incorporator/TMS membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG76_9STRA)

HSP 1 Score: 324 bits (831), Expect = 3.910e-97
Identity = 171/370 (46.22%), Postives = 241/370 (65.14%), Query Frame = 2 
Query:    2 VFFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSDGRIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGET-NITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGDKT------KPFVQNSVSGQPEHRIEPDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQS-------SDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            +FF VM + +    +FNN  W  K+  W+ +++ SVFISN VFD  GYVW AR GAF+F+I+QQ+VLID+AY+ ND+ V KA  LG+D +GR  LVALV  S+ L+  ++  +GV+F +F GC +N+ +LSLTLI  +A+T+LQLSG EGNLL++A+V+ Y TFL FSAVSK P + CNPF+G + N+T++++G+VLT LSL W+  ++  +IT LLGG+A     +   +Q+ +++    E+   +       PF+  S    PE        P P          DD G GW+FN+VM+L+SM+F M LTNWG +  +  S       SDPKNG  AMWL  A QW C ++Y WTLVAP++FPDR+FS
Sbjct:  104 IFFFVMMVGSFTGSLFNNRCWALKLTFWSVMIIASVFISNAVFDDHGYVWAARFGAFLFIILQQIVLIDIAYQWNDACVKKAQDLGEDGEGRKVLVALVCTSLLLFAVAISGVGVLFGYFKGCQSNDIILSLTLIMIVAMTVLQLSGPEGNLLTSALVSVYMTFLGFSAVSKNPDASCNPFIGSSQNLTSIIVGLVLTFLSLLWICASSGTSITKLLGGEAPPTTAS---LQLQVESVRNAEAAKASGSPSTGMPFIAQSAPAPPEE-------PEP----------DDHGDGWKFNIVMILLSMFFGMMLTNWGVVQSDSSSIENPATYSDPKNGEAAMWLTAAGQWACMLLYTWTLVAPKLFPDRDFS 453
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BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A7S2I2C9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2C9_9STRA)

HSP 1 Score: 241 bits (615), Expect = 2.250e-66
Identity = 141/363 (38.84%), Postives = 217/363 (59.78%), Query Frame = 2 
Query:    5 FFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKAN--QLGDDSD-GRIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESG-DKTKPFVQNSVSGQPEHRIE----PDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            FFL+ +L A C P  N   W  K F++  LV G++FI N+      Y+  AR+G  +F+  QQL+LIDLAY  N+S V+KA+  +L +  D G+ +L A+++     Y+GS+VVI +M+ +F GC +NE  +S+TL   + +T +QLSGEE +LL++A++ AY T+LC++AVS+ P  ECNP +G+ +I  +V+GI L +LSL W       + TA       K+E    P+    + SE  + G ++ +  V+  VS QP++        DA   P     G S ++     W+ NV++ L+S ++AM LT WG I     +++P  G  +MW+  A+QWL   +Y WTLVAPR+FPDR+FS
Sbjct:  125 FFLLAALSAYCKPSANREAWPAKYFLFLCLVAGTIFIPNDPLFDPIYMQLARVGGVIFVFFQQLILIDLAYNWNESWVEKADKAELEEGVDQGKKWLAAILVSCAIFYIGSIVVISLMYVYFSGCASNEAFISVTLAMSVIVTAVQLSGEESSLLTSAIIVAYSTYLCYTAVSRNPNDECNPQLGDEDILGIVLGIGLCLLSLTW----TGWSFTA-----HSKLEGTSNPLS---EDSEGEDPGKERGETIVKGVVSNQPDYGTNGGDVEDAKSSPEQT--GISPNEGFSSSWKLNVILALVSCWYAMALTGWGAIETGGNAANPDVGKASMWMIIASQWLVLTLYLWTLVAPRLFPDRDFS 473
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BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A7S3QC27_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC27_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.110e-58
Identity = 128/366 (34.97%), Postives = 203/366 (55.46%), Query Frame = 2 
Query:    2 VFFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSD---GRIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGDKTKPFVQNSVSGQPEHRIEPDAAPRPGSAINGPSTDDDGGLG-------WRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            +FF++ ++ ACC P  N   W  K  ++  L+ G+VFI NE   +S  +   RIG  +F+I  QL+L+D+ + +N+S V K +Q   D     G+ +  AL+     LYL S V IG+M+YFF GC  N   +++TLI  I  T +QL+GEE +L ++A + AY TFL ++AVSK P  ECNP +GE N+  +V+G+ LT++ + W     ++T    +G +   + + E              SGD  +      V+G+  +          G+A +    +DD   G       W+ NV++ LI+ ++AM LT+WG I      ++P+ G T+MW+   +QWL   +Y WTL+AP++FPDR+FS
Sbjct:  127 LFFILTAVAACCKPTANREAWPAKYVLFLLLITGTVFIPNEPLFSSILMNIFRIGGVIFMIFNQLILLDMTFNVNESWVAKGDQAELDEGEGAGKKWFGALLATCALLYLASFVAIGLMYYFFSGCGTNTAFITITLIVGIVSTGIQLTGEEASLFASAAIFAYSTFLLYTAVSKNPNDECNPQLGEENVLGIVLGVGLTMIGVLWT--GYSKTAYRAVGEEDDAVNDDE--------------SGDGGR-APNTRVTGEENY----------GAAEDNNEDNDDNEEGKRTFSSSWKLNVILALITCWYAMALTSWGSITDGGTVANPQVGRTSMWMIIGSQWLMVALYLWTLLAPKLFPDRDFS 465
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BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A7S4M8P3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M8P3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.030e-57
Identity = 132/359 (36.77%), Postives = 203/359 (56.55%), Query Frame = 2 
Query:    2 VFFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSDG---RIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGDKTKPFVQNSVSGQPEHRIEPDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            +FFL+ ++ A C P  N   W  K  ++  LV G+VFISN+      Y+   RIGA +F+  QQ++LIDLA+ +N+S V+KA+++  D  G   R +  A++     LY  S  VI +MF FF GC +N   +S+TL   I +T++QLSGEE +LL++A++  Y T+LC +AVSK P   CNP +G+ +I  +++GI  T+LSL W   +     + + GG +   E++          +E L  G   +  V+  V+ Q       +     G A NG S        WR NVV+ L++ +F+M LT WG I     +++P     +MW+  ++QWL   +Y WTLVAP++FPDR+FS
Sbjct:  119 LFFLLAAIAAACKPTANREAWPAKYVLFIFLVAGTVFISNDPLFFPVYMNIGRIGAVMFIFFQQIILIDLAFNLNESWVEKADRVETDEGGGAGRRWFGAILATCGLLYAISFTVIVLMFLFFSGCRSNVAFISVTLAMGIIVTVVQLSGEEASLLTSAVIVTYATYLCLTAVSKNPNGACNPKLGDEDILGIILGIGFTLLSLAWTGWSFTAE-SKINGGSSDSTEDSSVG-------NEHLSDGPNDQ-GVKGVVANQNYGTNTDEETGGRGDAQNGSSKPPR--TSWRLNVVLALVACWFSMALTGWGAIETGGNAANPDVSNVSMWMIISSQWLALSLYLWTLVAPKLFPDRDFS 466
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BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A7S2HQ00_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQ00_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.080e-56
Identity = 127/360 (35.28%), Postives = 204/360 (56.67%), Query Frame = 2 
Query:    5 FFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSDGRI-YLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSG--EEG-NLLSTAMVTAYGTFLCFSAVSKTPKSECNP-FVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGDKTKPFVQNSVSGQPEHRIEPDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            FF +M++     P  ++  W  K   W  L +GSVF+ N+V  TSG++W AR+GAFVFL++QQ++LID  Y +ND +     + G++  G   + + LV  ++ LY  +L  I ++F F+ GC  N+ ++S++L+  +A T+LQL    E+G NLL +++V AY  +L +S+VS  P   CNP +    +  A+ +G+ LT+LS+      ++ +IT LL       +E+    + P + +  L + D   P            ++   ++PRP   +         GL W+FNVV+VLI+MY+ MTLTNWGD   +   S P  G  ++W+N  A W+   +Y WT+VAP +FPDR+FS
Sbjct:   65 FFALMAMTTAAVPESHDWGWCLKSTFWFLLCVGSVFLPNDVM-TSGFIWFARVGAFVFLVLQQVILIDFGYNVNDKLYSLGAEGGEEEGGCSGWFIILVSAAMILYGAALSGIVLLFVFYTGCEVNDALISVSLVCIVAFTVLQLCSDPEQGHNLLVSSIVAAYVAYLTYSSVSSNPDESCNPTYSDRDDALAITLGLSLTMLSIATTVYFSSASITQLL-------DESPASSKGPARMTADLLTNDGMAPA-----------QVTTSSSPRPSDQLV-----IHRGLAWKFNVVLVLITMYWCMTLTNWGDSGGDSSGSSPMAGKISLWMNITASWISIALYTWTMVAPWIFPDRDFS 400
[Close]
BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A1E7F563_9STRA (Serinc-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F563_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.410e-55
Identity = 121/360 (33.61%), Postives = 205/360 (56.94%), Query Frame = 2 
Query:    2 VFFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLG--DDSDGRIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLE--SGDKTKPFVQNSVSGQPEHRIEPDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            VFF++ ++   C    N   W  K  ++  LV    F+ NE   T  Y+  AR+GA  F++ QQ++ +D+A+  ND  VD++ +    +   G+ +L+A+V+ + FL+L S+V   ++FYFF GC  N   +SLT+I  + +T  QLSG EG+LL+++++TAY T LC++AV++ P S+CNP +G  +  +++IG+ LT++SL +V    + T  + LGG+   I+                   SG  T  + Q++        ++ D      S+ N P+T  +    W+ N+ +  IS +F+M LT++G I+ +   ++P+ G   MW+   +QW   ++Y WTL+APR+FPDREFS
Sbjct:  113 VFFILAAVAVACKRTANREAWPAKYILFLFLVFAMCFVPNEPLFTDIYINIARVGAVFFILFQQIIFVDIAHNWNDGWVDRSEKADAEESGSGQKWLIAIVISAAFLFLVSIVGWVLLFYFFSGCATNTAFISLTIILSLLVTGTQLSGSEGSLLASSLITAYATMLCYNAVTRNPNSDCNPQLGGDDNLSIIIGLGLTIVSLSYV--GWSTTADSALGGENNDIDXXXXXXXXXXXXXXXXXKISGVVTNNY-QSAXXXXXXQSVDEDGGHT--SSENVPNTFSNN---WKLNLALATISCWFSMVLTDFGSIHADGTMANPQIGEVNMWILVGSQWFALLLYTWTLIAPRIFPDREFS 464
[Close]
BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A7S4AMX4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AMX4_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.920e-55
Identity = 121/360 (33.61%), Postives = 205/360 (56.94%), Query Frame = 2 
Query:    2 VFFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSDG--RIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGDKTKPFVQN--SVSGQPEHRIEPDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            +FFL+ ++   C    N   W  K  ++  LVLG  F+ NE   T+ Y+  AR+GA  F++ QQ++ +DLAY  ND  V+++N   ++ +G  + +L+A+++ + FL L S+V  G++FYFFGGC  N   +++T+I  +++ + QLSG EG+LL+++++TAY T LC+SAV++ P + CNP +   ++ ++ IG  LT++SL +V  +A    T     D+    + +           + E   K    V N  S   + E     D   R   ++NG +  D     W+ N+ +  ++ +F+M LT +G I  +   ++P+ G   MW+  A+QW   ++Y WTL+APR+FPDREFS
Sbjct:  113 IFFLLAAVAVSCKRTANREAWPAKYALFLFLVLGMCFVPNEPLFTNIYLNIARVGAVFFILFQQVIFVDLAYNWNDGWVERSNDAENEENGSGKKWLIAILVSAAFLLLASIVGWGLLFYFFGGCGTNIAFIAITIILSLSVIVAQLSGNEGSLLASSLITAYATMLCYSAVARNPNAACNPQLNTDDVLSICIGAGLTIVSLGYVGWSATADSTL----DSTVTIDEDXXXGNKDSARSSSEDKSKITGVVSNYQSTKDEDEESRVIDTEER---SLNG-NIPDTFSNNWKLNLALAAVTCWFSMVLTGFGLIQADGNVANPQIGEVNMWMIIASQWFALLLYTWTLIAPRIFPDREFS 464
[Close]
BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A7R9WZ09_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZ09_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.490e-54
Identity = 121/363 (33.33%), Postives = 205/363 (56.47%), Query Frame = 2 
Query:    2 VFFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDS--DGRIYLVALVLGSVFLYLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGDKTKPFVQNSVSGQPEHRIEPDAAPRPGSAINGPSTDDDG-----GLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            +FF++ ++   C P  N   W  K  ++  L L   FI NE      Y+   R+GA +F+ +QQ++L+DLA+  NDS V+++N+   +    GR +L+A+V+ +  +++ S V  G+M ++F GC  N   +++T++  + +T  QLSG EG+LL+++++T Y T LC+SAVSK P  +CNPF+GE +   + IG+  TV++L +    A  + TA    +    +E E       + +ET     + K     +     E     + +P  G   +G + D++         WR NV++ ++S +FAM+LT WG I     +++P+ G  +MW+   +QWL  ++Y WTL+APRVFPDR+FS
Sbjct:  178 LFFILAAIGVACKPSANREAWIAKYTLFFFLELLMCFIPNEPLFLDVYLNIGRVGAALFIFIQQVILVDLAFNWNDSWVERSNKAEAEEVGSGRNWLIAIVVSAAMMFITSFVGWGLMIHYFAGCPDNNAFIAITIVLCVIITGAQLSGGEGSLLASSLITLYATSLCYSAVSKNPDRDCNPFLGEDDFLGIFIGVGFTVVALGY----AGWSFTADQTFNRDSQDEIENSNFDYRKKTETTNPDGERKVTGVVTYGANNEDAGGDEESPSGGQNRSGSAGDEEAVPNTFSNSWRLNVILAIVSCWFAMSLTGWGAIKSGGTAANPQVGDVSMWMIIVSQWLVLLMYLWTLIAPRVFPDRDFS 536
[Close]
BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Match: A0A7S2BQB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BQB8_9STRA)

HSP 1 Score: 204 bits (519), Expect = 7.950e-54
Identity = 125/372 (33.60%), Postives = 206/372 (55.38%), Query Frame = 2 
Query:    5 FFLVMSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIGAFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSDGRIYLVALVLGSVFL-YLGSLVVIGVMF-YFFGGCTANEFVLSLTLIFPIALTLLQLSG--EEG-NLLSTAMVTAYGTFLCFSAVSKTPKSECNPFVGETNIT-AVVIGIVLTVLSLFWVTLNAARTITALLGGDAQKIEEAE-----------GPMQIPMQTSETLESGDKTKPFVQNSVSGQPEHRIEPDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLTNWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREFS 1069
            FF  M++ +   P  ++  W  KV  +   ++ +++I N V D  GYVW AR+G+F  +++QQ++L+D AY +N+ ++  A    D+    +Y +   LG  F  +  S+  I +MF Y+  GC  +   +SL LIF + LT+LQL+   E G NLL T++V+AY T+L +  VS  P   CNP   E     +V++G+ +T +S+      ++R++T LL GD ++ + ++            P+      +    SGD       ++ + Q       DAA       +  +  +DGG   +FN+ M+LI+MY+ M LT+WG+++ +   + P NG  AMW+N  A W+C ++YGWTLVAPR+FPDR+FS
Sbjct:   65 FFAFMAMLSGFMPPIHDHGWDIKVISYIGFLITTIWIPNSVVDNHGYVWFARVGSFGMIVLQQVILVDFAYTLNEKLLALAGDTVDEMSSWLYAL---LGLCFTNFAVSITGIVLMFLYYTDGCDDSTTFVSLALIFIVILTVLQLTSDPEHGHNLLVTSVVSAYITYLTYVGVSSNPNGSCNPNYSEDETAVSVILGLGITFISICGTVYFSSRSMTNLLDGDVEQGKRSQLNAVLTGGATSNPVNAQSAPASLNSSGDPNTGAAADADTAQ-------DAAGAAAYQASWGAAMNDGGHAMKFNIAMMLIAMYWCMVLTDWGNVDRSSSGASPTNGKIAMWMNITASWICVLLYGWTLVAPRIFPDRDFS 426
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1558.3648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C2_ECTSI8.650e-14863.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG76_9STRA3.910e-9746.22Serine incorporator/TMS membrane protein n=1 Tax=T... [more]
A0A7S2I2C9_9STRA2.250e-6638.84Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3QC27_9STRA2.110e-5834.97Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S4M8P3_9STRA1.030e-5736.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2HQ00_9STRA2.080e-5635.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1E7F563_9STRA1.410e-5533.61Serinc-domain-containing protein n=1 Tax=Fragilari... [more]
A0A7S4AMX4_9STRA1.920e-5533.61Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7R9WZ09_9STRA4.490e-5433.33Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A7S2BQB8_9STRA7.950e-5433.60Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1558contigH-elongata_contig1558:4580..16106 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.8
Seed ortholog evalue8.9e-126
Seed eggNOG ortholog2880.D7G4C2
Preferred nameSERINC3
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0002252,GO:0002376,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006575,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006658,GO:0006665,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0006950,GO:0006952,GO:0006955,GO:0007272,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008324,GO:0008366,GO:0008509,GO:0008514,GO:0008610,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009597,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0012505,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015194,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015825,GO:0015849,GO:0016020,GO:0016021,GO:0016053,GO:0019637,GO:0019752,GO:0019899,GO:0022857,GO:0022889,GO:0023051,GO:0023056,GO:0030148,GO:0030674,GO:0031090,GO:0031224,GO:0031984,GO:0032329,GO:0032501,GO:0032502,GO:0034220,GO:0042175,GO:0042552,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044085,GO:0044091,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046394,GO:0046467,GO:0046486,GO:0046942,GO:0046943,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051338,GO:0051347,GO:0051607,GO:0051704,GO:0051707,GO:0055085,GO:0060090,GO:0065007,GO:0065009,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0080134,GO:0080135,GO:0098542,GO:0098588,GO:0098655,GO:0098656,GO:0098805,GO:0098827,GO:0098852,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902235,GO:1902237,GO:1902475,GO:1902531,GO:1902533,GO:1903825,GO:1904217,GO:1904219,GO:1904220,GO:1904222,GO:1905039,GO:1905897,GO:1905898,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.serine transport
EggNOG OGsKOG2592@1,KOG2592@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionSerine incorporator/TMS membrane protein
Ec32 orthologEc-02_002170.1
Exons6
Model size3139
Cds size1056
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1558.3648.1prot_H-elongata_contig1558.3648.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1558 6647..16090 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929918.6820045-UTR-H-elongata_contig1558:4579..66461622929918.6820045-UTR-H-elongata_contig1558:4579..6646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1558 4580..6646 -
1691679208.1214204-UTR-H-elongata_contig1558:4579..66461691679208.1214204-UTR-H-elongata_contig1558:4579..6646Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1558 4580..6646 -
1622929918.7714496-UTR-H-elongata_contig1558:16090..161061622929918.7714496-UTR-H-elongata_contig1558:16090..16106Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1558 16091..16106 -
1691679208.2025151-UTR-H-elongata_contig1558:16090..161061691679208.2025151-UTR-H-elongata_contig1558:16090..16106Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1558 16091..16106 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929918.6926265-CDS-H-elongata_contig1558:6646..68621622929918.6926265-CDS-H-elongata_contig1558:6646..6862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 6647..6862 -
1691679208.1390858-CDS-H-elongata_contig1558:6646..68621691679208.1390858-CDS-H-elongata_contig1558:6646..6862Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 6647..6862 -
1622929918.7039132-CDS-H-elongata_contig1558:8752..89411622929918.7039132-CDS-H-elongata_contig1558:8752..8941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 8753..8941 -
1691679208.1486826-CDS-H-elongata_contig1558:8752..89411691679208.1486826-CDS-H-elongata_contig1558:8752..8941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 8753..8941 -
1622929918.7182481-CDS-H-elongata_contig1558:10660..107181622929918.7182481-CDS-H-elongata_contig1558:10660..10718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 10661..10718 -
1691679208.1581728-CDS-H-elongata_contig1558:10660..107181691679208.1581728-CDS-H-elongata_contig1558:10660..10718Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 10661..10718 -
1622929918.7299063-CDS-H-elongata_contig1558:11356..115501622929918.7299063-CDS-H-elongata_contig1558:11356..11550Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 11357..11550 -
1691679208.1700332-CDS-H-elongata_contig1558:11356..115501691679208.1700332-CDS-H-elongata_contig1558:11356..11550Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 11357..11550 -
1622929918.7463648-CDS-H-elongata_contig1558:12900..130961622929918.7463648-CDS-H-elongata_contig1558:12900..13096Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 12901..13096 -
1691679208.1785696-CDS-H-elongata_contig1558:12900..130961691679208.1785696-CDS-H-elongata_contig1558:12900..13096Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 12901..13096 -
1622929918.7597222-CDS-H-elongata_contig1558:15887..160901622929918.7597222-CDS-H-elongata_contig1558:15887..16090Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 15888..16090 -
1691679208.1922467-CDS-H-elongata_contig1558:15887..160901691679208.1922467-CDS-H-elongata_contig1558:15887..16090Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1558 15888..16090 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1558.3648.1

>prot_H-elongata_contig1558.3648.1 ID=prot_H-elongata_contig1558.3648.1|Name=mRNA_H-elongata_contig1558.3648.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=352bp
MSLCACCSPMFNNGFWGFKVFIWAALVLGSVFISNEVFDTSGYVWPARIG
AFVFLIMQQLVLIDLAYRINDSMVDKANQLGDDSDGRIYLVALVLGSVFL
YLGSLVVIGVMFYFFGGCTANEFVLSLTLIFPIALTLLQLSGEEGNLLST
AMVTAYGTFLCFSAVSKTPKSECNPFVGETNITAVVIGIVLTVLSLFWVT
LNAARTITALLGGDAQKIEEAEGPMQIPMQTSETLESGDKTKPFVQNSVS
GQPEHRIEPDAAPRPGSAINGPSTDDDGGLGWRFNVVMVLISMYFAMTLT
NWGDINVNDQSSDPKNGWTAMWLNTAAQWLCFIIYGWTLVAPRVFPDREF
S*
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mRNA from alignment at H-elongata_contig1558:4580..16106-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1558.3648.1 ID=mRNA_H-elongata_contig1558.3648.1|Name=mRNA_H-elongata_contig1558.3648.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=11527bp|location=Sequence derived from alignment at H-elongata_contig1558:4580..16106- (Himanthalia elongata Himel1 dioecious)
GGTGTTTTTTCTGGTGATGTCTCTCTGCGCATGCTGCTCGCCGATGTTCA
ACAACGGCTTCTGGGGCTTCAAAGTGTTCATCTGGGCGGCGCTGGTGTTG
GGGAGCGTGTTCATCTCCAACGAGGTGTTCGATACTAGCGGCTACGTGTG
GCCCGCCCGGATAGGCGCCTTCGTCTTTCTCATCATGCAACAGCTTGTGC
TCATCGATCTTGCCTATAGGTGGGTCGGGATACGACTATATTAATAAGAT
ATAATAAGATGATGCTCCAGGCCCTCTCCGCATAATATAAATAAATAATA
ATAATTAGATCGGAGACGATAAATATAAATAGGATTTTTTTCTTCCGTTC
TATTATTCAACATATATTATGGTAATTCATGGCACCAAACTCCGCCTACC
TGATTTATTTTAAAACTATTTATTTAGATGTTTGTCCCCACCCCTTTTTT
GCGTTGCTCATTTTTTTCATTTTTTACATTATTTTTTTTTCTTTCATTTT
TTCATTTTTCCTTCCTTAATCTTCGTACGAAAAAGTGTGCTTGTTTTCTG
TATTTTCCTCCTTATTTCCCCCTCTGCTGCTCCATGATTTCGGAAACGAT
GAATGCATAATAGGAGGGACGGACATGATTTATTCTGTATATATATAAGT
ATATACTACAAGTACAAAAACGAACACAGCGCAGTTTACACCTATTGACC
GGAGCTTTTCAAAAATCGATCTTCTGGCGGCGCTGCTGACTGCTCTTGTC
GATAAAAGGGAGAAAGGGGGGAGGGATTTCTGTCCCCGGGGTGTCTTTTA
TTACATACCTTTTCAGTGAACAACTGCCGCCTATTCGCAGTTATATTTTT
TCAATCTCGTCAAAAGAAGCGTATCAAAAACCGAGCTTGTAGCATCTTGG
TTGTGGAAGGGGGGGTATTCAAGTTTTGCATGCCTTAGCTGTTAGACCAT
TGATCATTGATCATTGACCATTGATATAATGCCATTGATATAATGCCATT
GATCATTCACCACGCATCCTGAGGAAGGAGGGAGAGATCATTATTCCCAC
ATCCCACATGATCTTCGTATTGTGGATAACAACCGCTTGTTACAACTTGC
CAAAAGTGGCGCAACACGTTTTGTTTTATTTTACCGGTTATACTGTATGC
CTCTTCATGCCGCTGCTTCTTATTATCCCCTGGCATAAATAGCTACCACT
TTCTTCTGGCTGTCCCATGCTACTACCTTCAAGAATCTCTTTTATCACAG
CCTTCGATTTGTGGTACAGTCTGGTACACTATTTCAGGCATATATTCTTC
TATCTTCTTTTCATCTAACTCTAACTCTAACTTTTCCGAGTAATAGTATT
ATGCACCGTTGCCGTTTCCTTTTGTATTGGAGAGTAGGTTGAACGTTTTT
CCCTTCTGGATGGTGTTTTTTTTGTTTTTTCTACCTTGTGACCACGGACT
GGATTTTGACATCAGCTTATGTGATAATTACATCAATCAATCAATCAACG
TTACCGTATATTCTTCCACTATAATACTATAATACTACGTGGATACGGTC
GTCACCATCATCTGAGCCTCAATCACATCTCATCTCATCTCATCTCGTCT
CATCTATCATCCTTGCCCTTATTTTCCTCGTTTAGACAATACTTTCCCCC
ATCGCCATCTACGTCTACGTTCCCAGAGTTCATGAGTATCGAATTTGATG
TTCAACTCTGGGGGAGTCATTTTCCTCTCCCGGGGGATTGTCTTGCATGT
TAAAGATACCAAATGCGGTATAACCCCCCCCCCTCTATAGATAGATATGC
TATATGTAAAGGTGCTATTTATGGAGCATGGGGTACTATACCGTGCTATA
CTGTAGTGTTATTTGTTGCTGCAGGGTGTCCTGTAAGCTGAGGGACCTTG
GTCGAAGAGCCTTAGCTCTTCCCATAGCGGTGAAACGATGCATGTTGAAT
GGTGAATCGTTGGAAAGCCCTAGAACAGCCATAGAGTTAGGAGAACTCCG
CCAAGAGTACTTTACTCTTGAGCAGATTGCAGCCTGAGCGTTATTACGGA
TATACCGTTGTGTATGCGGTGTGCCTGCGGCGCTTATGTGTTCGTGCGGA
AATCAAAGAGATCAAAGTCCCCGTGCGGTACTTGGAGTATTGTCGGTAAC
GGTAACGGTAACGCCCGCTGAATGCGCATAATTTGATCATTTGGTTTCTT
CCCGGTGTGTCCAATGTGTCCAATTAATTAATGGCATGGCGTTTCCAGTT
ATGCCTAGAAGCTAAAATCACCCTTGTGCGACGCAGCCTGGCCGGGGAAA
ACCTGCCATATCACTTTGTCCCGGCTTTGTTTGGATGCGTGGGCTATGCC
CGTAACCCCTCCCCCTCCCGCCTCCCGCAAAAGCGTGGGAACTTGCCGGA
GTCTGGAAAAATAAAAGAGGGTCGGTGAAATTAAGTTGCGGTTTGGGTAG
TGTGCCACCTACATATACTGTACGGTAATCGTAACGGTTTCAGGAACAGT
ATGTGTATAGGTAGCATCAGACAGTAATGATAGCAGTACGGTAACCGAAA
CGGTTTAAAGAATACTTTTTATATCGGTAACATGAACGGTAATTATAACA
GTGACGGTAATAATAGCTGTTTCAGTAGCAGTATTTTTACCGGTACTATG
AACGGTAATTATAGCAGTAACGGTAATTGTAACGGTTTTAGTAATTTCAG
TTGTATCGGCAACATGAACAGTAATCATAATTAGTAAAAGTAATTATAAC
AATAACATAAATCATAACAGTAACATCAATCATAACATGAATAGTAATCA
TAACACTAACAGTAATCATAACAGTAACATCAATCATAACACTAGCAGTA
ATCATAACAGTAACATAAATCATAACAGTAACATCAATCATAACACTAAC
ATCAATCATAACACTAGCAGTAATCACAATAGTAACATCAATCATAACAG
GAGCAGTGATCATGACACTCACAGCAATCATAACAGTAACGGTAATTTTA
ACCCCCCCAGGATCAACGACAGCATGGTGGACAAGGCGAACCAGCTCGGA
GACGACTCGGACGGGCGAATCTACCTCGTGGCGCTGGTCCTCGGCAGCGT
CTTCCTCTACCTGGGGTCCTTGGTGGTGATCGGCGTCATGTTCTACTTCT
TCGGAGGGTGTACGGCGAACGAGTTCGTCTTGTCTCTGACACTCATTTTC
CCTATTGTGAGTGCTAACGCGTTCCTTGCTATACCGATACATAACCTGAA
TATTAATATCAGTATATTAATATATTGATACATAAATCGATATATAGACA
CTATTATACTAGTATTAGATACCGAAGGAGCTATGTACGTTTATCTTATG
TCGAGATATTGAGTATAGTGTGTAAAGGATGTGAATCTGAAATATTGGGA
ATATTAATGTTTGTTTCGTGCAGCATTTTTCGTGTGCCGTGCACTCCTTT
CATAAATAATACTTGGTATAATATCCCGGTGCCTATTAGGGATGTTTTTT
ATTAGGTTATATATATATATATATACGTGGTATATGATATGGAGATCGAA
AATGTTGAGAACGTTACGTTGTGCTGCTTTTTTAGGGCCATACATCTTGC
ATAATTCAATACTGTACCTACACCTATGATAACATTCCTTACATAATACC
AGTATATAATATATGATATTATATAAGATATGATATGATAGATTGGAGGC
AGCTATAAAATAGTGCGGGGATGGTCTGCCCTTTTTCAACCAAATGGCCT
GCTGTGCATTGCTGAATACGGTACTACAGTGGTATTTCTATGTGAGGTGT
GAGGTGTGAGGGATATGTGTCACTACTTTGTTGTGTCTCTTTTGTGCCTT
TATCGGAGAATGGAGCGTTTACCCTCACGGGGTTTGGACAAGAATATTGC
ATTGTTCTATTGTCGACTTTTTAAAGGAGGGTGTAAAGTTACCTTTTAAG
TTTGCGTGTTTGCGTGTTCAGGGATGGCTCAGGGATAACCATGAAGCCAT
CTGAATACGCCTACCCAAAGTGAAACCCTCTGAGAACGCCCCCAGGGAAG
GGGGGTAGTCTCCTCAAGGTTTGCATGCTTTAGCTCTTAGACCATTGAAG
GAGGAAAATACCCCCTAGCCCAAGTGGTATTTACAATTCATAAATAAATT
GGGAGGAGATAGAAATAAATCTGCCTTTACTTTATTATATTTTCCCTTTT
ATGAATAATCATGGTTTTGGAGGTCCTGTTATGTCGAGGTTATTGCCTAC
TGTTCGAATAATGAGTAATAAGAAAAGTGGTTATTGCGTCAATAGAGCTA
TATTGGGCTATGGGGCGGGTTTAGTGTGAGTAACTGTGCTTTCAGTCGTT
TTTATAGTCGATTATACATCCATTGTTTTATCACATATACGTGTATGGGT
TGTTTTCATATTCATTAATTATCAACGAGCTCTAGACCCTAAAAGACCGT
AAAAGCACGGACGAAAAAACAGAAATAAAAACAAAAATCACGTGTTCAAA
ACAGTCTTACCTACTATGGTTGCTCGCACCCGACATCGTATCGCTTGCGG
CGGCAGGCGTTGACGCTCCTCCAGCTGTCGGGAGAGGAGGGTAATCTACT
GTCGACGGCGATGGTGACAGCCTACGGAACCTTCTTGTGTTTCTCAGCAG
TCTCGAAAACTCCGAAGAGCGAATGCAACCCCTTCGTCGGCGAGACTAAC
ATCACGGCTGTCGTTATCGGCATCGTCCTGACGGTACTGTCTCTCTTCTG
GTGAGAGCGAGGCCTGCCCTCCCCTGACTCCGCGCTCCTCTATGTATTTT
TGTTGAAAAGCCACCGCACGCGGCACGATGTAGTTCTCCATTATTAATAG
CACCCTGCGGCATGATCGGTACCGGTACAATCTCGACCGATTTGTTGGTC
AATACGACAGCAGTTTTGAGGTCAAATCTTGTGCGAAGCATCTGTCGCCG
TGCCGCCGTGGAAAGGAGATGAATAGAAAGAAAAGCGTGAGAATGCGAGA
AAGCGAGGTTAGTTAATCCATTGCTTGCACGGAAGGGGGTGAAGGGTTAA
CGATGCGCAGGAGAGCAGGAATAGGGCTGCTGTACTTGTATCGTGTAAAA
AAAAAAGAACATCTTATAATAGTGTTTTATAATAGCATGTTATAAAAGCG
TCAACCGGGGAGAGAGGGTGAGATTAGACCCATTAGGACCATAACCTTCG
ATAACTGCCAACCCTTTAATAATTTTATCTTACAAACTTCGCTCTTCACC
GTGTAATCTAGCTGCATGTTACTGTCTTCAAATTGTACCGGTTCTCATTA
AACTATCTTTCTGTTTTTGTGTTTTATATGTATCTCTATCGCCTTTTCTC
TCTGTCGACGAATGAAAATGTTTTTGTTTGCGTGTTAGGGTTACGCTTAA
CGCGGCCAGGACGATCACGGCCCTCCTCGGAGGTGATGCACAAAAGGTGA
GAGGCACACGTTTGACATCTGTGTCGTCTTGGCGCATTACGGTTAAGCTG
CGCCCCCGCGGCCGATCGCCGATCTTCAACGAGAGGTAGAGAAGGTACGC
GATATGGTAATGCTGCTAAGCACTTTCGCTGTCGAGGTTTCAATCAAGAA
TTAAGTTTATATTGAGATTTGTGTCTAGGTTGGTGTCTAGGGTGCTGTCC
AGGTTGATTTAGGGAAGGAAACGGGTGGCAACCACGCAGATGCACACGCT
CACGCTCAAGCGTCGAAGGCTGGTGGGGGCGAGGGAATGTTTCGTGGCCC
AGAAAATGGTTGAGAAACGTTAACTCGTTAGAGAAAATTATTTAGGAACT
AAACTGTCTCCAATCGTAGCTCAAACGATAATACACATGCCCGTCAAAGA
GACCAAATTTTGTGGATGTGCATTCAGAGAGTCAGTGCGCAAGGCTTCCA
AGCGCTGATTCCTGTCGAAGCAAAGCAAAGAGTACACATGACCTACAAAG
ACTTAAAATTACTTCATGTTCGATTTTTGTTCGCCGACGCTTTGCGCCCC
AGTTGGAAACTAACTAACCAGGTATGTATGATGGAAGCCCCCCGCCTCCC
CACCACACTTCCCCCACCTCGGCCGGCAAAACCCAGCCATACCGCTCCGT
CCCAGCATGATTAGTATTTGGATGTGTAGTCTAATTCCGTTAGGATGCGA
TATGCGTTGAACACAAGTGCACCCCTCCTCCACCTCTCCCGTAGCCCCTT
TCTTTAAAAAATGGCACCGAGTTGCTCCGAACCGAGAGTATAGAAGAGAG
CGCTCGTTTGCTCGGCGTCACCAGGTACATTGTTCATCCAACAAGCTATA
TTACGTACGCTATATCACACACGCTACATCTCACATCGTGCGCTAGACTT
TACACCCCAAAGCGAACGCTCGGCCTATGACGCTACTCTACCCCATCCAT
CCTCCATTTATTACGCCACGTATTCGTCGCTACGCCGTATACTCTACACC
CACTTGTACGCTGGACCCATATCTAGGCTGCATCCAAATTTACACTGCAA
CCACCAATACGCTACACAGCATACGCTTAACCCAACCGATGCGCCATACC
GAATACGCTTTACCCATACATGCGCTACACCACAGACGCTTCACCGACAA
ATACGCCACGCCGAAGACGCTTCACCCACGCATACGCTGCACCCGAATAT
ACGTTGCAACCACATATTCGCTGGACCCATATTTATAAAATCTGAACTAA
TTAAAACCCTCCGAACGTCCACCCATTCTTTATGCTGTACCCACACATGT
TCTACACGGAATACACTTTCCCCACGCATACTCTCCACAACATAGGCTTC
ACCCGAAGGATACGCCACACCGAATACGCTGCATCAACACGTATGTTACC
CACAATTTCGTTTCACAAAAAAACGCTGCGCCGTACGAACCCTACAACAC
ATACGATGCATCAACGTATACGGTACTCGCCCACATGCGCTACACCGCTT
ACGCTGAACCCCCACATACTATGCATCAACGTATTCGCCCCCCCGCCCAA
ACCGCTACATCGAATACGCTGTATCCAAATCGCTACATCGAATACGCTGT
ACCCGCACAACACTAGCCCAAATACGCTGTGCCCCCACGCCAGGGAACGT
TATCGCTACTCTTTACCTCGTCATCCTAATATGTTGAAGCTCATTTGCGT
GCTAAACCGGTACAGATAGAAGAGGCCGAAGGACCCATGCAGATACCAAT
GCAGACGTCTGAGACTCTCGAATCAGGCGACAAAACCAAGCCGTTTGTGC
AGAATTCCGTCTCTGGGCAGCCGGAGCACCGGATCGAGCCGGACGCAGCG
CCCAGACCAGGCTCCGCCATAAATGGGCCTTCGACGGACGACGACGGGGG
CTTGGTGAGAGTCAGAACTATGCTCTAATGACGATGGTGGTTTCGCGATA
TGGACAGTAGAGCGAGGTTGAATTTTCCGCGAGAAGGCTGGTAAAAGTCG
ACGGCTTTTGCAAACGCTCATTGATGGAAGGAAAGCCAAACTGGTAAAGA
GAAATAACAAGCTACGCCGTTACTTTAATGTTTTGTTCTACTTCTTGTTA
ATTAGCAGTATTTCTTGCTTGTACCAACAGAGCACCTTTATCGCCCCTCA
CCTCTAGTTACTCTTTGTGGTTTTCCTGGTTAGAAAATACTTGTATCTGG
TCGTTTATCTGTAAAACATGTAAACGCATTCCAACCCTCTGCAGATCCAC
ATTTTCTTTGCCCAGGGGGCCATCTATCATCATCGTCAGGTTCGAGTTTG
TACATGACTATGTTTCTGTTTGTTTTTGTTATTCCTTCTTCTCGAAAGCA
AATGTGTGGCTCTCTGTGACTCCAAATTAGTTACGTGCCGGTTTTTGTTT
TGTGTGTTCTTGATAAAGATCGTGACAGACCGTCCGTCCGATCTGGATCA
CCAGGGCATAATATTTTTGGTCAAAAACCACTTTACAGGGTAAGGTCGGA
TGTAGAGAGCATCATTCATGTGATTTGGCCACTCCTAGATTCGCACTTCA
CGACTCACGACTCCACCGTATGAAATAATGGGTCACCAATTTATGCGCTT
TTTCGGCCCCCCCTTCCCTCTTTGTAACCAAGTGTTTGATTTAAGCAGTG
TCAATCGTAAGGATTTATCTGAGTTTCTAGTTCAAAACCACCTGAAATTA
CCTCCGACCACCGTACGAGGTGAGGCTCGCATTAAACGAATATGTATTCT
ATTAATAGTTCATTACGATGCGATTCTGATCCTTGAGGCAAGCAGGATAA
TAGTTTCAGCCCCTTGCTCGTCCTTCTCTCTTTTGAGGCCTATTTCGAGT
ACTGATGAGCTGGATTGATGAAGCTGTTCCAATGTGGCACGGGCACCAGA
AAGCTTGCCGCCACGACTATAGCTGTAATAACCCACACCGGGGACGGAAC
CCCCCGTCCCTCCTCTCCCGACCCCCTCCTACTTTTCTAGAAGACGAAGC
AAATAGTCACATGAAACGTGGCAATTTTGGAATAATATCGATGAAGCCAT
TCGAAAAACATACCCCACCCCGGCCGACCTGTCTGTACCCCTCGATGATA
CGGGGAAAAAGACAGAGAACCACGGTCTGGTATCCCCGGAGGAGTCGCAT
CCTCTCGCTCTTGCCGTAGACTACCGCCTTCTTGACGATATTGAGCTTTT
TGTAGTCTGTGTAACTCCGCTCCCTCTTGGGTGAAAATAGACAGGATACA
GAGGTTCCTTGAATAGGAGGGGGGTGAGTGTGTAACATTCCGTCCTCCAA
ACCCAGACGACCGCTTACCTCTCTATTCAATATATATAAACACTTACGGG
GGGCTGGAAGACTGGATGTTCATTGCCGCTCAAGGCGCGATCGGGGAATA
CACACTGCGCAGTTATAGTCAGCTTACTAGTTTACGGTATATTCATGATT
CCACCTATTCGGCAGATCATAAGCGAAATTGACCACGGCGTGCTACAAAA
CACTGAAAGTGCGATACACACAGAGGGATGCACGTAAGTAGAGACACCCA
TATGCACAGACAATATAATAACGTGGCTGCCTTATTATGTCTTGATGTCC
CCATCATAACCGAGGAAACAATCGATAGGAGAAGTCAGCGCTGCACACCC
CCCGGGGGTACCCTCTCGCGGTACGCGTGTCGCTGCTCGATTTCGTGACA
CGCCCCAGAGGGTATTGCTTTTATAGCTTTTTATTCGTTAGCTTATTCAT
TCGTTCGGGCCGGGCGGCGTTCCTTTTATTCTCCCGTCGGTCAGGGCTGG
AGGTTCAACGTGGTGATGGTCCTGATCTCCATGTACTTCGCGATGACACT
CACGAACTGGGGGGACATCAACGTGAACGACCAGTCGAGCGATCCCAAGA
ACGGTTGGACGGCGATGTGGCTCAACACCGCCGCGCAGTGGCTCTGTTTC
ATCATCTACGGCTGGACGCTTGTGGCCCCTCGCGTGTTCCCTGATCGCGA
ATTCTCGTGACTTGCGTTATTTGCGTGGGTGGATTCATGGGGTTTCAAAA
CAACAGGGAGTTGGTAGGTGTTGTGTTGGAATATGTAGCACGAGGTCTGC
TGTGTCGCGAAATCCAACGGCGAAACTTTTTCACTCCTTTTTCCCGATGC
AATGAACCGCTTAATCTCATACAGAATCTAGTAGACGTAAAACCAATTCC
CCATCCTGTTTGGTAATAATGCGCCGGGGATTGTGGCCCGATCGAGTTTG
ATGGGGAATTGATTCCGTTGTAACGGTCGATATATTTTTCGGGGGAGTTT
TTGTCTAAATGTTTGGATACACGCGATCGCCCCAAAACGGTAAGAGAAAA
TGGTGACACGCATGCGTATAGAAAATACCGAGCGGTGCCGCATCAGCCGA
GCTGGTACCATGGTGACGCTCAACATCGCCGTGCCTTTTGTGTCTCGGTG
CTTGTGGCTTGGGTTTCGGCTTTGGCGTCTGTCTATGACCAAAATTGATT
TGACGCGGAAAAAGGCCTCACTTGTGAGGCGACTTGTACGCCACGCTGGG
TACATGGTTGAAGTTGGATGTGTTTATTCTAGCCATAGTTGAAGGTATAG
CTCTAGAGGAGGGTTCTTGTTTTCGTATCGGAGTACATGTATGCACCGCA
AGAAATGCTTTGTTTTGGACAAACCAGCTTCAACCGGATTCATTGGAGTT
GTTCCCGCGGTTTCCACTTTCGCTTGCACGATATGTTTGTGGTATAGCCT
GCGGAGGGAGGCGCGTTATGCGGGGGAAAAGAGGACCATTAGTTGCGCTG
GCAGCGTGCAGCTCGCGTGCCATAACACCCGGTGACTAAAGCTGTTCCGT
GCATCGCTCACATAAAATCGAAGTTCGCCTTTAGTGTAAGGTACGATGGG
ACATCAAATCCGAACGTGTGGCATGCGGGTTACTGTTTCAAGAGCTTACG
TCGACGAGGCGGAAACTCTCTTACAGCACACCGACATATACACGCGACGT
TCTCAAAGCATTGAAGTTTCTATCTGTACACTTATAGTCTCGACGTACTC
TTCAGGCTATGTTCCCAATGCTGGATGGTTGAGGTACAGTACGTATGGTG
TTGGAATAACGAGGCAGTAGACAGAAGACACGTGCGGTGAAGCAAGTAGG
ACAGGGGAATGGCCAGTAGAGTCCTGTGTAGCGGTTGATAGACTTTGTGG
TGCAACAGGAAATGAGGGAAGGACAGGAGTGACTAGAGGAGGGCCCTCCC
TTATCCATGTAATTGATGACATCATCCTCGTGTCTACACACTAAAACGTC
ATTGTACCAGCTCTCATGTATAGCTCCAGAACCTAATACGCAGTTCGATC
CGAATGCGCTTTTACCTCAAATATGCGACGCAAACGTTGCTATTGCCAAA
TTAGACATACAGTGGTGATATTGATATTGCTTGTCCGCGTCGACGACGTC
ATGATAAACATTCGAATCTGACGATAGTTGCCCCCTGGACTTCCTCTAAC
GGTGCTAAGAAGGGGTGGATGTTCGCAGAGTTTGAATGAGTTCATATGTT
TTTTTAGAAAATTGCTGAAGTTGTTCACATGACATCCCATTCATCAAGGA
TACGTGTTCCCTGGTAACAAAAGTTCCCGGTAATATACAAGTCCTGCGGG
AACATTGGCCGGCCGAGGAAACTTTTCACATTTCATATCCCCTTATGAGA
AACGCCTCCATGTTTGTGTGGAAACCTCATATTTCTTATTAAGCCGCCGC
ACGGGGAAGGAGAGAGGGAGAAAGAGAGCGAGGGGAGAGGGGAGAGAAGT
GGACGATTCTGATGTGGAAATGGTTGGCAGCGGTGCGTTCGCCGCGCTTA
CGTCGCAGCTGGGAGTATTCTAGTAGTTTATGATATTTTGTTGCGTGTGT
TGCAGTAAAACATATAATGAGCAACTGGAATGAATATTATACGATTTATC
CATCATTACATGTCCTGCATGTATGCGTGTATGCCTCAGTAATATCATAA
TGTATTGAATAAAATAAGCGCACAACCATAATTATATTTTACATATGATT
TTGTAGGAAACTAGTATGTTTTTTATC
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Coding sequence (CDS) from alignment at H-elongata_contig1558:4580..16106-

>mRNA_H-elongata_contig1558.3648.1 ID=mRNA_H-elongata_contig1558.3648.1|Name=mRNA_H-elongata_contig1558.3648.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2112bp|location=Sequence derived from alignment at H-elongata_contig1558:4580..16106- (Himanthalia elongata Himel1 dioecious)
ATGTCTCTCTGCGCATGCTGCTCGCCGATGTTCAACAACGGCTTCTGGGG
CTTCAAAGTGTTCATCTGGGCGGCGCTGGTGTTGGGGAGCGTGTTCATCT
CCAACGAGGTGTTCGATACTAGCGGCTACGTGTGGCCCGCCCGGATAGGC
GCCTTCGTCTTTCTCATCATGCAACAGCTTGTGCTCATCGATCTTGCCTA
TAGATGTCTCTCTGCGCATGCTGCTCGCCGATGTTCAACAACGGCTTCTG
GGGCTTCAAAGTGTTCATCTGGGCGGCGCTGGTGTTGGGGAGCGTGTTCA
TCTCCAACGAGGTGTTCGATACTAGCGGCTACGTGTGGCCCGCCCGGATA
GGCGCCTTCGTCTTTCTCATCATGCAACAGCTTGTGCTCATCGATCTTGC
CTATAGGATCAACGACAGCATGGTGGACAAGGCGAACCAGCTCGGAGACG
ACTCGGACGGGCGAATCTACCTCGTGGCGCTGGTCCTCGGCAGCGTCTTC
CTCTACCTGGGGTCCTTGGTGGTGATCGGCGTCATGTTCTACTTCTTCGG
AGGGTGTACGGCGAACGAGTTCGTCTTGTCTCTGACACTCATTTTCCCTA
TTGATCAACGACAGCATGGTGGACAAGGCGAACCAGCTCGGAGACGACTC
GGACGGGCGAATCTACCTCGTGGCGCTGGTCCTCGGCAGCGTCTTCCTCT
ACCTGGGGTCCTTGGTGGTGATCGGCGTCATGTTCTACTTCTTCGGAGGG
TGTACGGCGAACGAGTTCGTCTTGTCTCTGACACTCATTTTCCCTATTGC
GTTGACGCTCCTCCAGCTGTCGGGAGAGGAGGGTAATCTACTGTCGACGG
CGATGGTGACAGCCTACGGAACCTTCTTGTGTTTCTCAGCAGTCTCGAAA
ACTCCGAAGAGCGAATGCAACCCCTTCGTCGGCGAGACTAACATCACGGC
TGTCGTTATCGGCATCGTCCTGACGGTACTGTCTCTCTTCTGGCGTTGAC
GCTCCTCCAGCTGTCGGGAGAGGAGGGTAATCTACTGTCGACGGCGATGG
TGACAGCCTACGGAACCTTCTTGTGTTTCTCAGCAGTCTCGAAAACTCCG
AAGAGCGAATGCAACCCCTTCGTCGGCGAGACTAACATCACGGCTGTCGT
TATCGGCATCGTCCTGACGGTACTGTCTCTCTTCTGGGTTACGCTTAACG
CGGCCAGGACGATCACGGCCCTCCTCGGAGGTGATGCACAAAAGGGTTAC
GCTTAACGCGGCCAGGACGATCACGGCCCTCCTCGGAGGTGATGCACAAA
AGATAGAAGAGGCCGAAGGACCCATGCAGATACCAATGCAGACGTCTGAG
ACTCTCGAATCAGGCGACAAAACCAAGCCGTTTGTGCAGAATTCCGTCTC
TGGGCAGCCGGAGCACCGGATCGAGCCGGACGCAGCGCCCAGACCAGGCT
CCGCCATAAATGGGCCTTCGACGGACGACGACGGGGGCTTGATAGAAGAG
GCCGAAGGACCCATGCAGATACCAATGCAGACGTCTGAGACTCTCGAATC
AGGCGACAAAACCAAGCCGTTTGTGCAGAATTCCGTCTCTGGGCAGCCGG
AGCACCGGATCGAGCCGGACGCAGCGCCCAGACCAGGCTCCGCCATAAAT
GGGCCTTCGACGGACGACGACGGGGGCTTGGGCTGGAGGTTCAACGTGGT
GATGGTCCTGATCTCCATGTACTTCGCGATGACACTCACGAACTGGGGGG
ACATCAACGTGAACGACCAGTCGAGCGATCCCAAGAACGGTTGGACGGCG
ATGTGGCTCAACACCGCCGCGCAGTGGCTCTGTTTCATCATCTACGGCTG
GACGCTTGTGGCCCCTCGCGTGTTCCCTGATCGCGAATTCTCGTGAGGCT
GGAGGTTCAACGTGGTGATGGTCCTGATCTCCATGTACTTCGCGATGACA
CTCACGAACTGGGGGGACATCAACGTGAACGACCAGTCGAGCGATCCCAA
GAACGGTTGGACGGCGATGTGGCTCAACACCGCCGCGCAGTGGCTCTGTT
TCATCATCTACGGCTGGACGCTTGTGGCCCCTCGCGTGTTCCCTGATCGC
GAATTCTCGTGA
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