mRNA_H-elongata_contig15547.3632.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 525 bits (1353), Expect = 8.450e-184 Identity = 262/360 (72.78%), Postives = 295/360 (81.94%), Query Frame = 1
Query: 1 LKGTHF-MENGVI-NGYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWGGGWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDDK---NTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYYDRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQTYPEFVKSASSV 1065
LKG F ++G + NGY+YA WLFQWAFAATAATIVSGAVAERV+FNAYIIYS++LTSFIYPVVVHWGW GGWASAWRE DLLFGCGVIDFAGSGVVHMTGG+AALCAAIVVGPR GRF++ NTL QQS+VLQ+LGTLILW G AKTMVTTTISAAFGA+T+V+L KFN WD GAANNG+LAGLVG+TAGCSTCEPEGAM+IGI+SGF+YTY+SK L K+DDVVDA+PVH CGAWGVFAASLFATK+NY AYYDRAD CAGAFYGG G AVGANFVFILAV WV TC LF+GIK T+G+RV +++E GMDDSKHGGQTYPE +K ++
Sbjct: 103 LKGALFEADDGTLTNGYSYASWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWAGGWASAWRETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAYYDRADKCAGAFYGGAGNAVGANFVFILAVTAWVVATCTALFMGIKMTVGMRVDKEMEQIGMDDSKHGGQTYPEMMKGTTAA 462
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 520 bits (1339), Expect = 1.350e-181 Identity = 268/359 (74.65%), Postives = 302/359 (84.12%), Query Frame = 1
Query: 1 LKGTHF-MENGVI-NGYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWGGGWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDDK---NTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYY-DRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQTYPEFVKSAS 1059
LKG+HF ++G + NGY+YAMWLFQWAFAATAATIVSGAVAERV+FNAYIIYS++LTSFIYPVVVHWGWGGGWASAW +EDLLF CGVIDFAGSGVVHMTGG+AAL AAIVVGPR GRF++ NTL QQS+VLQTLGTLILW GXXXXXX AKTMVTTTISAAFGA+T+V+L K N WD+GAANNG+LAGLVG+TAGCSTCEPEGAM+IGI+SGF+YTY+SK L K+DDVVDA+PVH CGAWGVFAASLFATK+NYSAAYY DR D CAGAFYGG+G AV AN VFILAV+ WV TC LFLGI +G+RV +++E GMDDSKHGGQTYPE VK A+
Sbjct: 107 LKGSHFEADDGTLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWGGGWASAWVDEDLLFDCGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGXXXXXXVSTLAINGLAGVAAKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYSAAYYGDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGINAVVGMRVDKEMEQIGMDDSKHGGQTYPEMVKGAT 465
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: A0A7S2QUY7_9STRA (Ammonium transporter n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUY7_9STRA) HSP 1 Score: 373 bits (957), Expect = 1.600e-123 Identity = 212/353 (60.06%), Postives = 242/353 (68.56%), Query Frame = 1
Query: 1 LKGTHFMENGVINGYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWGG-GWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDDKNTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXX----AKTMVTTTISAAFGALTSV-ILAKFNKH-CWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYYD-RADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQTY 1035
L G E+ NG + A WLFQWAFAATAATIVSGAVAERV F YI+YS+VLTSFIYPVVVHWGW GWASAWRE +LLF CGV DFAGSGVVH+ G +AAL A VVGPRIGRFD+ L QQS V QTLGTLILW+G A TMVTTT+SAA LT+V I A +K D GAANNGILAGLV ITAGCS+ E A++IGI+ F Y LE K+DDVV AVPVH CG WGV A LFA++ YSAAYY RA CAG F GG+G+ + AN VFI+AV+ WVG+T +LFLG K TIG+RV +VE GMDDSKHGG+ +
Sbjct: 118 LNGISSTEDPAGNG-SKAAWLFQWAFAATAATIVSGAVAERVTFGCYIVYSVVLTSFIYPVVVHWGWNTYGWASAWRESELLFDCGVTDFAGSGVVHLCGAVAALVGAKVVGPRIGRFDEGIKLPQQSVVFQTLGTLILWMGWYGFNGASTLAIGTSTGDLSGAAAHTMVTTTLSAASCCLTTVAITALMSKDKVIDIGAANNGILAGLVSITAGCSSVECYAAILIGIIGAFWYVAGCAFLEKLKIDDVVGAVPVHGFCGIWGVLAPGLFASELQYSAAYYSARAAKCAGIFEGGDGSMLAANVVFIIAVILWVGITSTLLFLGCKMTIGVRVFLEVEENGMDDSKHGGKVF 469
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: A0A7S4DGA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA7_HETAK) HSP 1 Score: 360 bits (924), Expect = 1.110e-119 Identity = 186/335 (55.52%), Postives = 228/335 (68.06%), Query Frame = 1
Query: 37 NGYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWG-GGWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDDKNT---LHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYY-DRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGG 1026
+GY++ MWLFQWAFAAT ATIV+GAV ERV F AYIIYSI LT FIYP++VHWGW GGWASAWRE+ LL GCG+IDFAGSGV+H TGG+AAL A ++GPR GRF + Q S V QTLGTL LW XXXX A+ MV TTIS G ++ +I+A+F D +ANNG+L GLV ITAGC T PEGA + G+++G +Y AS + ++DDVVDA PVH CG+WG AA LFA ++NYS A+Y DRAD C GAFYG G GANF+F+L ++G+ V I++ ++T G RVP D E GMD SKHGG
Sbjct: 32 SGYDWGMWLFQWAFAATTATIVNGAVVERVCFGAYIIYSICLTGFIYPLIVHWGWSAGGWASAWREDKLLLGCGIIDFAGSGVIHTTGGVAALLGAYMIGPRKGRFSATGEVCEIPQLSWVYQTLGTLFLWFXXXXXNGVSSMYAAGGSLAGARAMVNTTISGGAGCISGLIVARFVHGYIDPASANNGLLGGLVAITAGCGTSNPEGAFVTGLIAGAIYVGASVLMLKLRIDDVVDAAPVHLFCGSWGFLAAGLFAAEDNYSVAFYSDRADKCCGAFYGCGGKQFGANFIFLLVIIGFTSVCSVIMYTFARYTTGFRVPPDQEDAGMDQSKHGG 366
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 360 bits (924), Expect = 2.240e-118 Identity = 191/353 (54.11%), Postives = 230/353 (65.16%), Query Frame = 1
Query: 16 FMENGVINGYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWG-GGWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDD--KNTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYY-DRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQTYPEFVKSASS 1062
F +G G N+A WLFQWAFAAT ATIVSGAV ERV F AY++Y++ L FIYPVVVHWGW GGWASAWRE +LL CGV+DFAGSGVVHMTGG AAL A+++GPR GRF D L Q S V QTLGTL LW+G A+ MV TTI+ +TSV +A F D AANNG+L GLV ITAGCS PEGA++IG V+GF+Y +S L ++DDVVDA PVH CG WGV AA L A K+NY +YY +R DC GAFYG G AN +F++ V+GW G ++F K+T+G+RV + +E GMDDSKHGG T P S S+
Sbjct: 111 FRGSGDDVGINWAGWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETELLMDCGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRFIDGIPVELPQLSFVYQTLGTLCLWMGWYGFNGVSTLAIVGLGEVAARAMVNTTIAGGVACVTSVTVAYFRIGYVDITAANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMFCGMWGVLAAGLLAEKDNYGESYYSERQGDCCGAFYGCGGNQFTANLIFVIVVLGWAGFCSFLMFTFAKYTVGLRVSKAIEDAGMDDSKHGGMTMPSGGDSLSN 463
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE) HSP 1 Score: 358 bits (920), Expect = 3.870e-118 Identity = 184/340 (54.12%), Postives = 237/340 (69.71%), Query Frame = 1
Query: 46 NYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWG-GGWASAWR--EEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDD---KNTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYY-DRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQTYPEF 1044
+YA W+FQWAFAA+A TIVSGA+AER F AY+++S ++TSFIYP+V HW W GGWASA ++DLLFGCG I+ AGSGVVHMTGG+AAL ++GPR GRF++ NT+ QQS+VLQTLGT ILW G A+ M T IS A G ++S++ K WD+G+A NGILAGLV +TAG +T EPEGA ++G++ G LY +AS L +DDVV+AVPVH G WG+ AA FA+K Y+AAY DR+ CAG YGG+G+++ AN +F++AVV WVG+ +LF+ K TIGIRV ++ E+ GMD SKHGGQTYPEF
Sbjct: 106 SYAKWIFQWAFAASATTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTGGMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVISGASGGISSLVANKRLCGYWDTGSALNGILAGLVSVTAGAATYEPEGAFVVGLIGGMLYVFASALLLKLHLDDVVNAVPVHLFGGMWGLVAAGFFASKFGYAAAYSEDRSGRCAGVLYGGSGSSLAANIIFLMAVVVWVGLLTLLLFVVTKLTIGIRVSKEQEMAGMDGSKHGGQTYPEF 445
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI) HSP 1 Score: 358 bits (920), Expect = 4.250e-118 Identity = 190/362 (52.49%), Postives = 240/362 (66.30%), Query Frame = 1
Query: 1 LKGTHFMENGVINGYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWG-GGWASAWR--EEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDD---KNTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYY-DRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQTYPEFVKSASSV 1065
L GT G + +YA WLFQW FAA+A TIVSGA+AER F AY+++S +LTSFIYP+V HW W GGWASA ++DLLFGCGV DFAGSGVVHMTGG+AAL ++GPR GRF++ NT+ QQS+VLQTLGT +LW G AK M T I A G +TS+++ K WD+G+A NGIL GLV ITAG T EPEGA ++G++ G LY +AS L +DDVV+A PVH G WG+ +A LF++K Y+ AY DR+D CAG YGG+G + AN VF++AV+ WVG+ +LF+ K TIGIRV + EL GMDDSKHGGQT+PE + +V
Sbjct: 94 LYGT---STGDFDALSYANWLFQWTFAASATTIVSGAMAERATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLVSITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGLFSSKFAYAMAYSEDRSDTCAGILYGGSGGTLAANIVFLMAVLAWVGLLTLLLFVVTKLTIGIRVSKQQELAGMDDSKHGGQTFPELLPRRRTV 452
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK) HSP 1 Score: 351 bits (901), Expect = 3.340e-115 Identity = 185/336 (55.06%), Postives = 226/336 (67.26%), Query Frame = 1
Query: 40 GYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWGG-GWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRF--DDKNTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYYD-RADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLG---IKFTIGIRVPEDVELRGMDDSKHGG 1026
GY +A WLFQWAFAAT ATIV+G+VAER+ F+AY++Y+ L SF+YP VVHWGW GWASAWREEDLLFGCGV+DFAGSGVVH TGG+ AL A ++GPR GRF K + S + QTLGTLILW G A+ MVT+TISA G ++SV+LAK + D GAANNGIL GLV ITA CS +PEGA +IG++ G +Y +++ L ++DDVV+A PVH CG WGV A+ LFA++ Y AAYY R CAGAFYGG+G+ AN FILAV+ W I+F I F IG+RV +VE GMD SKHGG
Sbjct: 121 GYAWAGWLFQWAFAATTATIVTGSVAERITFSAYLVYAFCLVSFVYPCVVHWGWNANGWASAWREEDLLFGCGVLDFAGSGVVHTTGGVVALWGAKILGPRTGRFINGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAPAARAMVTSTISAGAGCISSVLLAKLHTGIIDPGAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQIDDVVNASPVHMFCGVWGVLASGLFASEAPYGAAYYSARQSKCAGAFYGGDGSQFAANLAFILAVLAWSTTWGCIIFFACDKIPF-IGLRVDLEVEEMGMDSSKHGG 455
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 341 bits (875), Expect = 6.960e-111 Identity = 180/362 (49.72%), Postives = 230/362 (63.54%), Query Frame = 1
Query: 1 LKGTHFMENGVIN---GYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGWG-GGWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFD---DKNTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGFLYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYY-DRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQT-YPEFVKSAS 1059
L G HF + + GY +A WLFQWAFAAT+ATIVSGAV ER++F Y+IY++ L FIYP+VVH W GGW SA+R++ LL CGV+DFAGSGVVHMTGG+AAL A++VGPR GRF + L Q S V Q +GTL LW G AKTM+ +T+S A G L+S ++A+ D AANNGIL+G V ITAG +PEGA++IG ++G +Y SK L ++DDVV+A PVH CG WG+FA L A NY YY DR+ C GAFYG G+ +GA VFIL + W GVT A++F K+T+G+RV +++E GMD SKHGG Y V +S
Sbjct: 110 LAGDHFRSDDATDEQLGYEWANWLFQWAFAATSATIVSGAVMERISFGCYLIYAVTLIGFIYPIVVHMTWNSGGWMSAFRQDHLLSRCGVVDFAGSGVVHMTGGVAALVGAVMVGPRFGRFGPNGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSSLYIVGKGLVAAKTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEPNNYGRVYYEDRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHGGMADYVHHVGESS 471
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Match: F0XYW7_AURAN (Ammonium transporter n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYW7_AURAN) HSP 1 Score: 335 bits (860), Expect = 9.640e-109 Identity = 188/347 (54.18%), Postives = 220/347 (63.40%), Query Frame = 1
Query: 43 YNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSFIYPVVVHWGW-GGGWASAWREEDLLFGCGVIDFAGSGVVHMTGGIAALCAAIVVGPRIGRFDDKNTLHQQSSVLQTLGTLILWLGXXXXXXXXXXXXXXXXXXXAKTMVTTTISAAFGALTSVILAKFNKHCWDSGAANNGILAGLVGITAGCSTCEPEGAMIIGIVSGF--LYTYASKALEYFKVDDVVDAVPVHFACGAWGVFAASLFATKENYSAAYY---DRADDCAGAFYGGNGAAVGANFVFILAVVGWVGVTCAILFLGIKFTIGIRVPEDVELRGMDDSKHGGQTYPEFVKSASSV 1065
Y A WLFQWAFA AATIVSGAVAER F AY+ YS V+T FIYPV VH GW G G S WR L+ GCGVIDFAGSGVVHMTGG+AAL AA +VGPR D K L QQS V QTLG L+LW+G A M+TTTISAA G L + L H D+ ANNGILAGLV ITA C GA +IG+++ +Y ASK+L + +DDVVDA PVH ACG WGV AASLFAT+ Y AYY DRA +CAG FYGG+G A+G+ +F+L ++ WVG T +LF + TIGIR + E GMDDSKHGG + SA+ V
Sbjct: 141 YAKAFWLFQWAFAGAAATIVSGAVAERCKFGAYVCYSCVITGFIYPVCVHMGWDGSGKLSPWRSSKLVGGCGVIDFAGSGVVHMTGGVAALVAAKMVGPRT---DWKRGLPQQSVVYQTLGVLMLWVGWYGFNGVSTLAITGYGGLAAHVMMTTTISAATGCLATTFLGYLVDHVIDTAYANNGILAGLVSITAPCPVVNLWGAFVIGLIAAPAPVYLGASKSLVFLGIDDVVDAFPVHGACGMWGVIAASLFATEYYYKIAYYSDDDRASECAGVFYGGDGGALGSACLFVLFIIAWVGGTMTLLFTAMHLTIGIRCSPEEEAMGMDDSKHGGSVLTDLEMSAAQV 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15547.3632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15547.3632.1 >prot_H-elongata_contig15547.3632.1 ID=prot_H-elongata_contig15547.3632.1|Name=mRNA_H-elongata_contig15547.3632.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=351bp MENGVINGYNYAMWLFQWAFAATAATIVSGAVAERVAFNAYIIYSIVLTSback to top mRNA from alignment at H-elongata_contig15547:20..2701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15547.3632.1 ID=mRNA_H-elongata_contig15547.3632.1|Name=mRNA_H-elongata_contig15547.3632.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2682bp|location=Sequence derived from alignment at H-elongata_contig15547:20..2701+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15547:20..2701+ >mRNA_H-elongata_contig15547.3632.1 ID=mRNA_H-elongata_contig15547.3632.1|Name=mRNA_H-elongata_contig15547.3632.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2106bp|location=Sequence derived from alignment at H-elongata_contig15547:20..2701+ (Himanthalia elongata Himel1 dioecious)back to top |